pre-miRNA Information
pre-miRNA hsa-mir-1306   
Genomic Coordinates chr22: 20086058 - 20086142
Synonyms MIRN1306, hsa-mir-1306, MIR1306
Description Homo sapiens miR-1306 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-1306-5p
Sequence 15| CCACCUCCCCUGCAAACGUCCA |36
Evidence Not_experimental
Experiments
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSM5858927 8 COSMIC
COSM8222405 15 COSMIC
COSM1032175 17 COSMIC
COSM122562 22 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1197492175 14 dbSNP
rs1245517093 17 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol MRPS14   
Synonyms DJ262D12.2, HSMRPS14, MRP-S14, S14mt
Description mitochondrial ribosomal protein S14
Transcript NM_022100   
Expression
Putative miRNA Targets on MRPS14
3'UTR of MRPS14
(miRNA target sites are highlighted)
>MRPS14|NM_022100|3'UTR
   1 ATGAGCTCCAGAACCTATTGAGCTTGCAGGGAAGCCAAGCTTGCAGTTCCAGCAAGCAAAGATTTTTTTTAATAGACCAA
  81 ACCCTAATCTCTACAGGGGCCCAGTACAGTTGTTTGGCCTACCTGATGCTATCTCTAAACTACTTTTAAAATGAAGACAT
 161 TTGGGTGTTTCATGTCAGTGAATTATCTTTTCTCTTGGACTTAACAAACATACTGTTCCCATACATAGTACAAAGAGTAG
 241 CATAATAAATATTTTCTGTGAATGTTTTTTATACCCTCCTTTTAAGTTTAATCTTTTAGTAACATATAGGGGTTTTTGTA
 321 TTAAGAGCATTATTTCATAAAATGCTATCTTATACATAATCCAACTAATTGACATGTAGCTCATGTATGGCAGTTTGTAA
 401 TCCTGGACTAGCTTTGCTGACCTGCAGAGCTCCCCTTAACTATTATTGTTAGATAAACAGATTGGATAGCAAGGCTGCTG
 481 TTCTGGATTATCTAATGCTCCACTTCTTCTTGTGATGGCTGAACAAAAGAACCACTAAGTGTTTTCTTGTCCATCCTTAA
 561 GGGACTTTAAAACAAATTATGCCTCTTTAAGTCCTTGAAAGTCTCCATCTAAAGAGGAAAAGTTTGTTGGAACAGTATAT
 641 ATTCCCTATTTTTATGTTTATTTAATCCATAACAGAAATGAGTAAGGGTAGCACAAAGTTCTCATTCAGTAACTCAACAG
 721 TGTGATCATCAGCCCAGTGATAAAAATATACATACTGAATGGAAGTACCTACTTAACATCAGGAAAATATTCCTGGAGAA
 801 CTTAATAAATCAGGAGGTGAGGGGTGAGATTTTTTTCTGCACACAGAGGGAACAAAAGCACAAAGAAGCAAAGGCACTCT
 881 GTAGCATCAGAGAACCACAGTCACTTCAGTAGATCAGAAATATGAAGCACAAGACAAGGCCCGTATTGTGGAGGATCTCA
 961 CAAATCATGTGAAGGAATTAAGACTGACATACCAGGTATTACAGAGTTTTAAGCACAGGAATGACATCATCAGTTTGTAA
1041 TACAGGTAAGTGACAGCTGTGTGGCAGATGGCCATGAGAGGAAAAAGCTACAGGCAAGACAACCAGTTAGGAGGATGTCT
1121 TAGTTGTTGAGGAAGATGAAGGCCTGAACTAACATTGTGGTATTAGTAGAGGAGAGAGGACAGATTTTTAAAGTTTTAGG
1201 AAAGAAAATTGGGCAAGACTTACAAGACTGATTATATCTAAGAGGTAAAGATGGTTCTCTGGGTTCCTGATAAAAGTGTC
1281 TAGATAGATGGTAGAGGGCAATTCCAAGAGGGCAACTCCAAGATAGAAAATTTGGAAAAAGAACAAATTTAGGGGAAACA
1361 GAAGATAAGCGAGTTCAGGTTCCAGTCATGCGGTGTTGGAGATGCCTGTGTCATCTGATGAAGACTAGTACGCAGCTGGA
1441 TAGCAGAGTCCGAAACTCAGGTGGAGGTGAAGTTATGAGGGAATTATCACAATCTAGTTTGGATTCATATTTCTTAAATA
1521 TGTATGACAACTTACCAACTGGAATGTTCTAGCTAATATCTCAACTTAGAATCCATCTCACTACCAATGGGCAAACACTT
1601 GTGTTCTAAAGTTACTTGCAAGTAGTTTATACTGCCAACTTGATATATATACATGCTATAGTTTGAACATTTTGTGTACT
1681 TCCAAAATTCACATTAAAATCTAATCCACAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' accugcaaacGUCC-CCUCCACc 5'
                    |||| ||||||| 
Target 5' gtccgaaactCAGGTGGAGGTGa 3'
1448 - 1470 152.00 -18.90
2
miRNA  3' accugcaaacguccCCUCCACc 5'
                        ||||||| 
Target 5' aacttaataaatcaGGAGGTGa 3'
799 - 820 140.00 -11.40
3
miRNA  3' accugcaaACGUC-C--CCUCCACc 5'
                  |||:| |  |||| || 
Target 5' tccagtcaTGCGGTGTTGGAGATGc 3'
1381 - 1405 116.00 -9.20
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30457394 9 COSMIC
COSN1414007 22 COSMIC
COSN30143139 35 COSMIC
COSN30154278 93 COSMIC
COSN31534470 123 COSMIC
COSN31598500 164 COSMIC
COSN31479755 171 COSMIC
COSN30129989 213 COSMIC
COSN31487262 219 COSMIC
COSN31569292 221 COSMIC
COSN31609261 249 COSMIC
COSN31481782 256 COSMIC
COSN31547942 340 COSMIC
COSN31516556 358 COSMIC
COSN30538380 417 COSMIC
COSN20090408 444 COSMIC
COSN20095601 446 COSMIC
COSN26356203 842 COSMIC
COSN30382410 892 COSMIC
COSN32083295 1023 COSMIC
COSN1414005 1086 COSMIC
COSN16167138 1129 COSMIC
COSN20787548 1176 COSMIC
COSN7185210 1385 COSMIC
COSN16366661 1495 COSMIC
COSN6009157 1659 COSMIC
COSN30391687 1665 COSMIC
rs16847706 598 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1236566723 4 dbSNP
rs201569223 5 dbSNP
rs757033224 8 dbSNP
rs1325409777 11 dbSNP
rs1438875458 14 dbSNP
rs777197099 15 dbSNP
rs201209223 18 dbSNP
rs754256677 21 dbSNP
rs1199859379 32 dbSNP
rs1379407781 34 dbSNP
rs766887314 37 dbSNP
rs760964289 45 dbSNP
rs1353224840 46 dbSNP
rs368671197 49 dbSNP
rs772487730 49 dbSNP
rs759901081 51 dbSNP
rs998264656 52 dbSNP
rs3850 61 dbSNP
rs1172333870 62 dbSNP
rs867472764 65 dbSNP
rs981852978 71 dbSNP
rs1390421151 73 dbSNP
rs1018224726 78 dbSNP
rs1007136313 84 dbSNP
rs571798056 89 dbSNP
rs551878350 98 dbSNP
rs1021038900 105 dbSNP
rs1053930540 107 dbSNP
rs958233460 108 dbSNP
rs115356343 109 dbSNP
rs902656741 118 dbSNP
rs1417535035 120 dbSNP
rs1210611841 122 dbSNP
rs562504684 125 dbSNP
rs1251393023 131 dbSNP
rs1046594246 132 dbSNP
rs1431483226 133 dbSNP
rs889098940 136 dbSNP
rs1052212413 141 dbSNP
rs997576511 145 dbSNP
rs549264196 149 dbSNP
rs529221385 151 dbSNP
rs897915777 156 dbSNP
rs1293721739 158 dbSNP
rs1036489435 159 dbSNP
rs1402539339 165 dbSNP
rs949150719 170 dbSNP
rs1282026254 171 dbSNP
rs1058741 172 dbSNP
rs1054791326 173 dbSNP
rs909747789 174 dbSNP
rs185719379 185 dbSNP
rs1222087014 187 dbSNP
rs909135746 187 dbSNP
rs1267456212 194 dbSNP
rs983336848 200 dbSNP
rs1222025255 202 dbSNP
rs1236278951 211 dbSNP
rs1489324187 213 dbSNP
rs749585486 220 dbSNP
rs1192096804 223 dbSNP
rs1419473683 228 dbSNP
rs1349448786 231 dbSNP
rs950633746 233 dbSNP
rs923118632 238 dbSNP
rs1410762907 258 dbSNP
rs17302346 262 dbSNP
rs141657779 273 dbSNP
rs982185800 276 dbSNP
rs746205995 284 dbSNP
rs1360553702 292 dbSNP
rs1401363378 292 dbSNP
rs1287019515 297 dbSNP
rs984627 299 dbSNP
rs1018275382 311 dbSNP
rs1414371020 320 dbSNP
rs540782935 325 dbSNP
rs1174342755 327 dbSNP
rs1451763727 329 dbSNP
rs1245456823 341 dbSNP
rs1006854825 345 dbSNP
rs181451752 347 dbSNP
rs1183144648 349 dbSNP
rs1214627826 373 dbSNP
rs1473733480 374 dbSNP
rs1483831806 375 dbSNP
rs1255097059 383 dbSNP
rs576229787 384 dbSNP
rs1032942610 385 dbSNP
rs1032576094 387 dbSNP
rs1442880560 389 dbSNP
rs556525027 397 dbSNP
rs147983480 406 dbSNP
rs116067602 414 dbSNP
rs1327883188 419 dbSNP
rs1268279918 432 dbSNP
rs1344091793 434 dbSNP
rs1030294311 435 dbSNP
rs1304534677 439 dbSNP
rs554423838 442 dbSNP
rs757093473 443 dbSNP
rs1013789364 446 dbSNP
rs1282766623 456 dbSNP
rs1310257470 460 dbSNP
rs1447790910 460 dbSNP
rs534207291 462 dbSNP
rs1356191232 465 dbSNP
rs1341554652 467 dbSNP
rs1222295797 469 dbSNP
rs1015005532 481 dbSNP
rs1006335560 483 dbSNP
rs1312881651 501 dbSNP
rs1433597331 502 dbSNP
rs1387991199 504 dbSNP
rs1160050630 505 dbSNP
rs1458994947 507 dbSNP
rs1179731898 509 dbSNP
rs1411921822 512 dbSNP
rs1441081460 519 dbSNP
rs1162389699 521 dbSNP
rs894897125 532 dbSNP
rs1406541895 539 dbSNP
rs1048708448 550 dbSNP
rs1178102058 552 dbSNP
rs1054845701 553 dbSNP
rs905105421 565 dbSNP
rs571635113 580 dbSNP
rs1378843910 581 dbSNP
rs74317897 590 dbSNP
rs1248075731 593 dbSNP
rs1210107839 594 dbSNP
rs16847706 598 dbSNP
rs913593851 601 dbSNP
rs987826335 609 dbSNP
rs936438885 611 dbSNP
rs925441349 622 dbSNP
rs1201975656 626 dbSNP
rs1231991587 626 dbSNP
rs569333132 629 dbSNP
rs12741561 632 dbSNP
rs1426607179 635 dbSNP
rs1480031019 644 dbSNP
rs12754912 646 dbSNP
rs1171337793 648 dbSNP
rs929233454 649 dbSNP
rs1408050233 650 dbSNP
rs953612834 653 dbSNP
rs12741553 660 dbSNP
rs1286391727 662 dbSNP
rs1350756711 669 dbSNP
rs1438692021 672 dbSNP
rs1030993541 681 dbSNP
rs1226799313 683 dbSNP
rs1344996912 696 dbSNP
rs923138976 704 dbSNP
rs1280700228 711 dbSNP
rs1337816159 713 dbSNP
rs975943950 715 dbSNP
rs964867976 733 dbSNP
rs12737197 741 dbSNP
rs12741401 750 dbSNP
rs1271832545 759 dbSNP
rs777277961 760 dbSNP
rs1321242157 763 dbSNP
rs12741397 767 dbSNP
rs1224257642 777 dbSNP
rs12741387 786 dbSNP
rs12741386 787 dbSNP
rs1266102201 790 dbSNP
rs376554326 798 dbSNP
rs12755758 813 dbSNP
rs12755757 814 dbSNP
rs758206594 815 dbSNP
rs752267182 817 dbSNP
rs1348287507 818 dbSNP
rs1474303020 825 dbSNP
rs1167174271 827 dbSNP
rs1414280028 828 dbSNP
rs764606677 836 dbSNP
rs887859748 837 dbSNP
rs1365008920 840 dbSNP
rs1034476731 843 dbSNP
rs1400728870 845 dbSNP
rs1300578355 846 dbSNP
rs1032290430 855 dbSNP
rs1325262711 858 dbSNP
rs549266604 871 dbSNP
rs529072500 881 dbSNP
rs966985055 882 dbSNP
rs1025606300 899 dbSNP
rs1166530658 900 dbSNP
rs1448774415 904 dbSNP
rs1390736061 905 dbSNP
rs1013760008 910 dbSNP
rs371275903 912 dbSNP
rs1216773313 913 dbSNP
rs141447109 914 dbSNP
rs1221840409 915 dbSNP
rs949321482 922 dbSNP
rs892103086 923 dbSNP
rs1292443155 931 dbSNP
rs1446268799 932 dbSNP
rs1161883196 940 dbSNP
rs1420381150 942 dbSNP
rs189807999 943 dbSNP
rs760661639 956 dbSNP
rs12741068 960 dbSNP
rs1005962675 963 dbSNP
rs936386605 968 dbSNP
rs1400585729 969 dbSNP
rs762322918 973 dbSNP
rs1047390329 976 dbSNP
rs1342603721 994 dbSNP
rs774851238 997 dbSNP
rs1450975325 1004 dbSNP
rs1342019903 1006 dbSNP
rs1312443549 1007 dbSNP
rs12062145 1015 dbSNP
rs1240423419 1017 dbSNP
rs1261907343 1021 dbSNP
rs932130351 1023 dbSNP
rs923489068 1024 dbSNP
rs1230626018 1033 dbSNP
rs767326513 1035 dbSNP
rs1040666576 1037 dbSNP
rs138464982 1040 dbSNP
rs369008639 1043 dbSNP
rs367698240 1046 dbSNP
rs1440491839 1047 dbSNP
rs1437423116 1052 dbSNP
rs910368370 1061 dbSNP
rs563553841 1063 dbSNP
rs376704515 1069 dbSNP
rs1305901675 1070 dbSNP
rs1453194817 1072 dbSNP
rs1173647208 1075 dbSNP
rs1409015261 1078 dbSNP
rs1468559041 1079 dbSNP
rs879661964 1080 dbSNP
rs1401494344 1082 dbSNP
rs563689313 1085 dbSNP
rs1446996331 1090 dbSNP
rs1308752154 1091 dbSNP
rs543799703 1098 dbSNP
rs145829491 1101 dbSNP
rs561801809 1111 dbSNP
rs1275368051 1119 dbSNP
rs1431433196 1125 dbSNP
rs978117573 1126 dbSNP
rs1191317015 1137 dbSNP
rs1458071703 1145 dbSNP
rs542887739 1162 dbSNP
rs1249201020 1163 dbSNP
rs140657937 1164 dbSNP
rs1418563296 1165 dbSNP
rs554189835 1166 dbSNP
rs1482939324 1167 dbSNP
rs1275867259 1169 dbSNP
rs969603286 1170 dbSNP
rs1176360283 1171 dbSNP
rs146833893 1173 dbSNP
rs1424734609 1174 dbSNP
rs1463899509 1178 dbSNP
rs1311000952 1181 dbSNP
rs754870054 1182 dbSNP
rs1393971527 1193 dbSNP
rs865836836 1193 dbSNP
rs1219913593 1195 dbSNP
rs578076888 1197 dbSNP
rs558223289 1200 dbSNP
rs185303434 1209 dbSNP
rs1286689328 1214 dbSNP
rs1346874182 1219 dbSNP
rs1033841986 1224 dbSNP
rs892385803 1225 dbSNP
rs1052341684 1227 dbSNP
rs1318307830 1231 dbSNP
rs1000933412 1234 dbSNP
rs903548296 1234 dbSNP
rs1050583726 1237 dbSNP
rs931760673 1238 dbSNP
rs1271075708 1241 dbSNP
rs1489888072 1247 dbSNP
rs1006016480 1250 dbSNP
rs887531907 1252 dbSNP
rs1168698710 1257 dbSNP
rs181708929 1262 dbSNP
rs940876141 1263 dbSNP
rs555812615 1271 dbSNP
rs1461129692 1276 dbSNP
rs1163863319 1284 dbSNP
rs751389074 1285 dbSNP
rs1309664406 1289 dbSNP
rs1366861186 1290 dbSNP
rs1402612567 1291 dbSNP
rs1026449025 1298 dbSNP
rs529227563 1301 dbSNP
rs1302456458 1304 dbSNP
rs1464463212 1308 dbSNP
rs565005930 1313 dbSNP
rs769805366 1318 dbSNP
rs1293102265 1320 dbSNP
rs952129288 1322 dbSNP
rs745940097 1339 dbSNP
rs927329892 1344 dbSNP
rs901483122 1345 dbSNP
rs1221934209 1347 dbSNP
rs1182161426 1350 dbSNP
rs1040316838 1354 dbSNP
rs1487105142 1356 dbSNP
rs1180987264 1363 dbSNP
rs1185311339 1363 dbSNP
rs781451557 1364 dbSNP
rs1424801190 1365 dbSNP
rs943275882 1370 dbSNP
rs1024730133 1378 dbSNP
rs888982302 1383 dbSNP
rs757469357 1386 dbSNP
rs1013363901 1388 dbSNP
rs189399109 1391 dbSNP
rs1453181983 1392 dbSNP
rs566617733 1393 dbSNP
rs1482537261 1396 dbSNP
rs1245540859 1397 dbSNP
rs1237445175 1402 dbSNP
rs546500884 1408 dbSNP
rs1210826528 1413 dbSNP
rs1260705774 1416 dbSNP
rs1483775244 1424 dbSNP
rs1185882592 1428 dbSNP
rs184567372 1431 dbSNP
rs1266379679 1432 dbSNP
rs945414082 1445 dbSNP
rs1442331633 1446 dbSNP
rs80331520 1451 dbSNP
rs992446661 1452 dbSNP
rs1330135950 1458 dbSNP
rs959611250 1471 dbSNP
rs1156808483 1476 dbSNP
rs752534293 1480 dbSNP
rs34838911 1484 dbSNP
rs1394103534 1491 dbSNP
rs901587150 1492 dbSNP
rs550190540 1493 dbSNP
rs1403666856 1496 dbSNP
rs1452139791 1502 dbSNP
rs191307922 1507 dbSNP
rs940822401 1508 dbSNP
rs1450193745 1514 dbSNP
rs1385798230 1516 dbSNP
rs1306908910 1518 dbSNP
rs984967427 1523 dbSNP
rs1324812756 1524 dbSNP
rs1157828948 1530 dbSNP
rs908071877 1538 dbSNP
rs1261602139 1540 dbSNP
rs1049750155 1545 dbSNP
rs952282691 1549 dbSNP
rs1233145919 1551 dbSNP
rs1174908816 1556 dbSNP
rs1481328090 1556 dbSNP
rs1406629712 1558 dbSNP
rs1413750456 1559 dbSNP
rs1178540159 1562 dbSNP
rs149801718 1565 dbSNP
rs927247549 1568 dbSNP
rs1329777120 1569 dbSNP
rs1356563164 1575 dbSNP
rs776589717 1577 dbSNP
rs971837552 1582 dbSNP
rs1198688207 1586 dbSNP
rs1225844800 1595 dbSNP
rs1182938360 1601 dbSNP
rs988877906 1608 dbSNP
rs1275562575 1615 dbSNP
rs1439138490 1628 dbSNP
rs956524285 1632 dbSNP
rs965770774 1638 dbSNP
rs1019018079 1639 dbSNP
rs1202036776 1640 dbSNP
rs1250379802 1642 dbSNP
rs1490382486 1643 dbSNP
rs375410934 1646 dbSNP
rs540875759 1649 dbSNP
rs541880383 1652 dbSNP
rs967992491 1658 dbSNP
rs889034384 1659 dbSNP
rs1029361141 1662 dbSNP
rs545206633 1663 dbSNP
rs529466614 1664 dbSNP
rs560627676 1669 dbSNP
rs1301818697 1675 dbSNP
rs1345363745 1676 dbSNP
rs1432131128 1685 dbSNP
rs1272242701 1688 dbSNP
rs1262713945 1696 dbSNP
rs1337893773 1696 dbSNP
rs764189230 1700 dbSNP
rs1054265939 1702 dbSNP
rs1273533873 1712 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545213. RNA binding protein: AGO2. Condition:Control ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' accugcaaacGUCC-CCUCCAcc 5'
                    |||| ||||||  
Target 5' -uccgaaacuCAGGUGGAGGU-- 3'
1 - 20
Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
CLIP-seq Support 1 for dataset GSM545213
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / Control
Location of target site ENST00000476371.1 | 3UTR | UCCGAAACUCAGGUGGAGGU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
184 hsa-miR-1306-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT089458 TET3 tet methylcytosine dioxygenase 3 2 2
MIRT167143 LHFPL2 LHFPL tetraspan subfamily member 2 2 2
MIRT290873 BCL10 B-cell CLL/lymphoma 10 2 2
MIRT320237 CYCS cytochrome c, somatic 2 2
MIRT462980 ZNF784 zinc finger protein 784 2 2
MIRT478039 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT479102 CNNM4 cyclin and CBS domain divalent metal cation transport mediator 4 2 4
MIRT482763 TMEM126B transmembrane protein 126B 2 2
MIRT489972 MCC mutated in colorectal cancers 2 4
MIRT495484 TNFAIP2 TNF alpha induced protein 2 2 2
MIRT496148 GPS1 G protein pathway suppressor 1 2 2
MIRT523370 GSR glutathione-disulfide reductase 2 2
MIRT526299 SORCS2 sortilin related VPS10 domain containing receptor 2 2 4
MIRT527427 NRL neural retina leucine zipper 2 2
MIRT527860 SMOC1 SPARC related modular calcium binding 1 2 6
MIRT529685 FBXL19 F-box and leucine rich repeat protein 19 2 2
MIRT531526 NOM1 nucleolar protein with MIF4G domain 1 2 2
MIRT532461 PLGRKT plasminogen receptor with a C-terminal lysine 2 2
MIRT532519 KCNN1 potassium calcium-activated channel subfamily N member 1 2 2
MIRT532668 APOBEC3D apolipoprotein B mRNA editing enzyme catalytic subunit 3D 2 2
MIRT532718 SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 2 2
MIRT533205 WAPAL WAPL cohesin release factor 2 2
MIRT536480 KIAA1549 KIAA1549 2 2
MIRT537158 GID8 GID complex subunit 8 homolog 2 2
MIRT539307 AKIRIN1 akirin 1 2 2
MIRT539569 CNKSR3 CNKSR family member 3 2 4
MIRT540045 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 4
MIRT540235 SAMD5 sterile alpha motif domain containing 5 2 2
MIRT543016 CRK CRK proto-oncogene, adaptor protein 2 2
MIRT551436 F2 coagulation factor II, thrombin 2 2
MIRT556146 MED12L mediator complex subunit 12 like 2 2
MIRT570714 DGKE diacylglycerol kinase epsilon 2 2
MIRT572037 GRWD1 glutamate rich WD repeat containing 1 2 2
MIRT572409 MRPS14 mitochondrial ribosomal protein S14 2 2
MIRT572660 AGMAT agmatinase 2 4
MIRT611450 NRIP3 nuclear receptor interacting protein 3 2 2
MIRT611601 JAKMIP3 Janus kinase and microtubule interacting protein 3 2 4
MIRT612208 TMEM109 transmembrane protein 109 2 2
MIRT612312 VSIG10 V-set and immunoglobulin domain containing 10 2 2
MIRT614146 MAFK MAF bZIP transcription factor K 2 2
MIRT617371 C21orf62 chromosome 21 open reading frame 62 2 2
MIRT617689 MAPKBP1 mitogen-activated protein kinase binding protein 1 2 2
MIRT618495 DENND5B DENN domain containing 5B 2 4
MIRT618802 SPATA21 spermatogenesis associated 21 2 2
MIRT619061 TTC4 tetratricopeptide repeat domain 4 2 2
MIRT619902 NPTXR neuronal pentraxin receptor 2 2
MIRT620080 DZIP1L DAZ interacting zinc finger protein 1 like 2 2
MIRT622233 SLC25A45 solute carrier family 25 member 45 2 2
MIRT625262 ZNF566 zinc finger protein 566 2 2
MIRT625725 CXorf38 chromosome X open reading frame 38 2 2
MIRT625813 POFUT1 protein O-fucosyltransferase 1 2 2
MIRT625839 NXPE2 neurexophilin and PC-esterase domain family member 2 2 2
MIRT626024 XRCC2 X-ray repair cross complementing 2 2 2
MIRT626054 PDE4C phosphodiesterase 4C 2 2
MIRT626082 CWF19L1 CWF19 like 1, cell cycle control (S. pombe) 2 2
MIRT626356 PACS1 phosphofurin acidic cluster sorting protein 1 2 2
MIRT626790 KCNK6 potassium two pore domain channel subfamily K member 6 2 2
MIRT627797 RAB11FIP1 RAB11 family interacting protein 1 2 2
MIRT628234 FAM212B family with sequence similarity 212 member B 2 2
MIRT628241 FADS1 fatty acid desaturase 1 2 2
MIRT628249 ETF1 eukaryotic translation termination factor 1 2 2
MIRT628799 A2ML1 alpha-2-macroglobulin like 1 2 2
MIRT628879 FAM177A1 family with sequence similarity 177 member A1 2 4
MIRT629333 ZNF487P zinc finger protein 487 1 1
MIRT629435 RPL34 ribosomal protein L34 2 2
MIRT629977 MRPL36 mitochondrial ribosomal protein L36 2 2
MIRT630727 FPR1 formyl peptide receptor 1 2 2
MIRT630776 MSANTD3 Myb/SANT DNA binding domain containing 3 2 2
MIRT631074 ZNF829 zinc finger protein 829 2 2
MIRT633139 C6orf132 chromosome 6 open reading frame 132 2 2
MIRT633178 AGO3 argonaute 3, RISC catalytic component 2 2
MIRT633510 RNF14 ring finger protein 14 2 2
MIRT633613 APCDD1 APC down-regulated 1 2 2
MIRT633668 MYO1F myosin IF 2 2
MIRT633707 LRRC8B leucine rich repeat containing 8 VRAC subunit B 2 2
MIRT633798 SOX7 SRY-box 7 2 2
MIRT634203 TMOD2 tropomodulin 2 2 4
MIRT634297 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT634509 NYAP2 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 2 2
MIRT634518 NKAP NFKB activating protein 2 2
MIRT634754 CRCP CGRP receptor component 2 2
MIRT635741 IFNAR1 interferon alpha and beta receptor subunit 1 2 2
MIRT636480 KLHL7 kelch like family member 7 2 2
MIRT637042 FITM2 fat storage inducing transmembrane protein 2 2 2
MIRT637748 POLR3K RNA polymerase III subunit K 2 2
MIRT638568 IFNE interferon epsilon 2 2
MIRT639155 TMEM167A transmembrane protein 167A 2 2
MIRT639848 ZBTB20 zinc finger and BTB domain containing 20 2 2
MIRT641770 ZNF207 zinc finger protein 207 2 2
MIRT642285 ZNF99 zinc finger protein 99 2 2
MIRT642685 KRT74 keratin 74 2 2
MIRT643530 ERAP2 endoplasmic reticulum aminopeptidase 2 2 2
MIRT643742 ZNF284 zinc finger protein 284 2 4
MIRT643945 WIPF3 WAS/WASL interacting protein family member 3 2 2
MIRT644320 NFKBID NFKB inhibitor delta 2 2
MIRT644383 ZNF286A zinc finger protein 286A 2 2
MIRT645130 HES2 hes family bHLH transcription factor 2 2 2
MIRT645607 PCDH11X protocadherin 11 X-linked 2 2
MIRT647121 ZNF446 zinc finger protein 446 2 2
MIRT648484 CMBL carboxymethylenebutenolidase homolog 2 2
MIRT648549 BBS5 Bardet-Biedl syndrome 5 2 2
MIRT649252 TRIM65 tripartite motif containing 65 2 2
MIRT649468 SLC10A7 solute carrier family 10 member 7 2 2
MIRT650013 KLB klotho beta 2 2
MIRT650068 CCDC134 coiled-coil domain containing 134 2 2
MIRT650325 RTN2 reticulon 2 2 2
MIRT651093 ZNF516 zinc finger protein 516 2 2
MIRT651265 ZKSCAN4 zinc finger with KRAB and SCAN domains 4 2 2
MIRT651272 ZKSCAN1 zinc finger with KRAB and SCAN domains 1 2 2
MIRT651402 ZBTB16 zinc finger and BTB domain containing 16 2 2
MIRT652163 TRIM66 tripartite motif containing 66 2 2
MIRT653153 SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 2 2
MIRT653477 SLC4A1 solute carrier family 4 member 1 (Diego blood group) 2 2
MIRT653922 SERPINC1 serpin family C member 1 2 2
MIRT654243 RNF115 ring finger protein 115 2 2
MIRT655354 PCDH11Y protocadherin 11 Y-linked 2 2
MIRT655958 NDST1 N-deacetylase and N-sulfotransferase 1 2 2
MIRT656318 MESDC1 talin rod domain containing 1 2 2
MIRT656578 LSM10 LSM10, U7 small nuclear RNA associated 2 2
MIRT657210 IKZF2 IKAROS family zinc finger 2 2 2
MIRT657856 GJB1 gap junction protein beta 1 2 2
MIRT658207 FBXO44 F-box protein 44 2 2
MIRT659003 DIAPH1 diaphanous related formin 1 2 2
MIRT659349 CSRP1 cysteine and glycine rich protein 1 2 2
MIRT659501 CISD3 CDGSH iron sulfur domain 3 2 2
MIRT659761 CCDC171 coiled-coil domain containing 171 2 2
MIRT660149 BRD4 bromodomain containing 4 2 2
MIRT661582 EPHX2 epoxide hydrolase 2 2 2
MIRT661753 ATM ATM serine/threonine kinase 2 2
MIRT662223 CCRL2 C-C motif chemokine receptor like 2 2 2
MIRT663883 CXorf56 chromosome X open reading frame 56 2 2
MIRT664308 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT664649 GALM galactose mutarotase 2 2
MIRT664671 L2HGDH L-2-hydroxyglutarate dehydrogenase 2 2
MIRT665050 C3 complement C3 2 2
MIRT666467 SCRG1 stimulator of chondrogenesis 1 2 2
MIRT666529 RNF170 ring finger protein 170 2 2
MIRT669118 CDC42BPG CDC42 binding protein kinase gamma 2 2
MIRT669311 C17orf75 chromosome 17 open reading frame 75 2 2
MIRT669358 BHLHE22 basic helix-loop-helix family member e22 2 2
MIRT669691 ABLIM1 actin binding LIM protein 1 2 2
MIRT674223 FAM120AOS family with sequence similarity 120A opposite strand 2 2
MIRT674766 QRSL1 glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 2 2
MIRT675207 ZNF554 zinc finger protein 554 2 2
MIRT675271 ZNF431 zinc finger protein 431 2 2
MIRT676265 PBOV1 prostate and breast cancer overexpressed 1 2 2
MIRT676573 VSIG1 V-set and immunoglobulin domain containing 1 2 2
MIRT677566 C19orf52 translocase of inner mitochondrial membrane 29 2 2
MIRT677631 ALG1 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase 2 2
MIRT678115 MICA MHC class I polypeptide-related sequence A 2 2
MIRT678694 RNF157 ring finger protein 157 2 2
MIRT679583 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT679621 MED28 mediator complex subunit 28 2 2
MIRT683700 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT683721 LACTB lactamase beta 2 2
MIRT690967 APOL1 apolipoprotein L1 2 2
MIRT691611 IPP intracisternal A particle-promoted polypeptide 2 2
MIRT702524 KCND3 potassium voltage-gated channel subfamily D member 3 2 2
MIRT704762 CDKN2AIPNL CDKN2A interacting protein N-terminal like 2 2
MIRT708738 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT708898 SKIDA1 SKI/DACH domain containing 1 2 2
MIRT709965 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT710373 GM2A GM2 ganglioside activator 2 2
MIRT710533 TMEM201 transmembrane protein 201 2 2
MIRT710582 HLCS holocarboxylase synthetase 2 2
MIRT711030 MBOAT2 membrane bound O-acyltransferase domain containing 2 2 2
MIRT712200 SHROOM4 shroom family member 4 2 2
MIRT713798 CPLX2 complexin 2 2 2
MIRT714096 ZNF486 zinc finger protein 486 2 2
MIRT714923 PPP1R12C protein phosphatase 1 regulatory subunit 12C 2 2
MIRT716518 TNPO2 transportin 2 2 2
MIRT716701 HLA-B major histocompatibility complex, class I, B 2 2
MIRT717070 MTMR6 myotubularin related protein 6 2 2
MIRT719561 CBL Cbl proto-oncogene 2 2
MIRT719688 ALDH1L2 aldehyde dehydrogenase 1 family member L2 2 2
MIRT720134 RIMKLA ribosomal modification protein rimK like family member A 2 2
MIRT720222 IPPK inositol-pentakisphosphate 2-kinase 2 2
MIRT720982 METTL21A methyltransferase like 21A 2 2
MIRT723821 PDS5A PDS5 cohesin associated factor A 2 2
MIRT723999 LMTK2 lemur tyrosine kinase 2 2 2
MIRT724963 PTK6 protein tyrosine kinase 6 2 2
MIRT725217 PEA15 phosphoprotein enriched in astrocytes 15 2 2
MIRT725262 PARVB parvin beta 2 2
MIRT755883 METTL14 methyltransferase like 14 3 1
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-1306 Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)
hsa-mir-1306 Fluorouracil 3385 NSC19893 approved resistant cell line (KYSE)
hsa-miR-1306-5p Imatinib 5291 NSC743414 approved resistant High Chronic Myelogenous Leukemia tissue
hsa-miR-1306-5p Paclitaxel 36314 NSC125973 approved sensitive cell line (HS578T)
hsa-miR-1306-5p Doxorubicin 31703 NSC123127 approved sensitive cell line (HS578T)
hsa-miR-1306-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-1306-5p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)

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