pre-miRNA Information
pre-miRNA hsa-mir-1245a   
Genomic Coordinates chr2: 188978092 - 188978161
Description Homo sapiens miR-1245a stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-1245a
Sequence 45| AAGUGAUCUAAAGGCCUACAU |65
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN31562560 15 COSMIC
COSN26581044 19 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs906938680 2 dbSNP
rs1159117523 3 dbSNP
rs780486044 6 dbSNP
rs771479866 17 dbSNP
rs1002976932 18 dbSNP
rs1428029219 19 dbSNP
Putative Targets

Gene Information
Gene Symbol KIAA0232   
Synonyms -
Description KIAA0232
Transcript NM_001100590   
Other Transcripts NM_014743   
Expression
Putative miRNA Targets on KIAA0232
3'UTR of KIAA0232
(miRNA target sites are highlighted)
>KIAA0232|NM_001100590|3'UTR
   1 ACCTGCAAAATAGTACAAATTATTGTTTAAAAATGATATGTGATGGAAAATTACTCTTCAGTGAGACCTGTTAATCTAAA
  81 ACAACAACTTAGGTTTCCTCTTCAATTAACTGATTCAGATTGGTAATAATTATCTTTCTCTTCTTGCTTATTTTAGAGTT
 161 GAGGACAGCTATCCTGTTAAAGATTTTTTTTCCCAGCTGTTAAATTCTTGGCTATTTGAAATAGACTAGATTGTGTTGTC
 241 AAATCAAGAATGGGTGTGCATGTGCTTGTCTTAGAAGTATCACTGCTTTTTGCATCTTAACTGCAGTTAATTTTCCTTCC
 321 GACTGCGGTTATATCACTATGACCTTACTAGCATTGCAGTGTCAACAACCACTTCTGCTCTTCAGAGACTTCAGCTTTGG
 401 AGCATTTAGGCTTTGTTCTCCAAGAACTGGGATATCCATTCTTACCCTACAGTGGCTTGATGCCTTTCTGAAGGCGAGAG
 481 GGAAGCCTGGGTGACTCAGCGGTGGTCTCCATTCAGCAAAATCTCATGTACATTTCCAGTAGGAACCGCAGAGGTGTGCT
 561 TTTCAAGACTCACCAAATACTGTGTTTTCTCTCTTAGGATTTCTTTTCCCCTAAAGTATCACGGAAGATACTATGGTTCG
 641 TGACTTTCTTGCTAACTGAAGAAGCCAAGGATTTGGGGTGTGGGGTCGTATGCGAGACACAGTGGGGTAAGGGTGCATAC
 721 CCCACCCCTTACCTGCTCTCATACTGCAGTTACATTTACACCAAAACCCCATGCAGGGTTCTTTGTGGTGAGTGTTCCAT
 801 ACGTGCTAAGGACCTTAGTTACAGATTGTTACTTTCTGGTGACCTATGTTGAATTGAAACCCCCAAAACTTGAAATTGTG
 881 AACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCTGCTGCAGCTAGCCGCTTCTTGGCTGTGA
 961 TGTAGTATAGCTTCGATCTCATTTTGTGTTTGAGAGAATGTTCTGGGCAAGTTCTGTGTGTGGTGGGTTGGGGCGGGTAG
1041 AGTCATGAGTTTTCCACATCCCTGTGTGGTGGTTTTGCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTG
1121 AGCCCGGGGAGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCTCATGGCATTGTGCCAC
1201 AGGCAGAGGCCAGGAGGAGCAGTATGTGCACAGCCGAAACATTTTACATTTTTTACATTGTTTTTCTTTTTTAACCAACT
1281 CATTGTTTAAAAAACAAAAACAAAAAAAACCTAATCTGTGAAATCAGCGTAGCATGCCTGGAGCATCAGGAATGGCAGAA
1361 AAGTCTGATGCGCTCTAGACAGCTTCACCACTCATTTGGGCAGGCAGTAAACACACATATAATTTATTAGCTGGGAGCTG
1441 AACTGGCTGTGAAATCTATGATTTGCTTTGAACATTTGGGTTTTGTTGCCTTTTTCTTAATTGATAACACAGAAAAGAAA
1521 GTACCATCAAAGACTGTGGAGTCATTGAGGGTCTGTGTGTCCTCACCGAGAGGGACCTGGTGTGCCCGCCGGGTCGATCT
1601 TCCCACGTGTTAGGGTTTATTTTTATACAACACATCTTTTGACACTTTAAGGTGGGTGGGTGTGTGTGTGTGTGTGTGTG
1681 TGCGCGCGTGCGCGCGCGCATGTGTAAGGTTTTATGTTGCTGTTATTTATTTACGAACTTCAGATACGTTTTTATGTATT
1761 TTTCATTCTTCTGGAGCTTCCTAAAAATTGATAAGCATCTGCACTGAAATATAATTTAACAGCAAAAGTAAAAAAGGATT
1841 GAAAGTTGTAAATTCCTCATATCACTACAGTGACGATTATTCTAGAAATCGTTGCTTGTGTAGCAAAGACCAAATAAATA
1921 GATTTCAGACACAACCTTGAGCACAGTTGATTTTGGACAGCTGCTGTTTATTAGGAAAGGGCTCCAGGTGGCAAAGGTGC
2001 ACACTTCCTCAGACACAGGTGAGAAGATGCAGCACCTTCCACAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTC
2081 ACAAATTATGTATTTATTTGTTTTCATAGTTAAGTAGCTGAAGCTCAGAGGCTTTCAGCAACAGAGATGAAAGTGTGGCT
2161 TTTTAGTTTTGTGAATGGATGATCACAAAGAAAAAGCATTTTTAAAAAGTTGGCAAACGCTGAAACGCACTGTGGTATGA
2241 AGCGCATTGCATTTCCATAGCACTGAAGTACCAGTTTCCATTCCTGGGCTGAGATTGTTTTTCCCGTGGTTGTATTGTTC
2321 TGATTTCACGTACACCAGAGTAACTGATTTTTTTTTGTTTGTTTTCTTGTGGAGTTAACACCAAATAAAAATTGTAAAAA
2401 ACAGTTTGTTGTTTTTATTTCTCATAGCAAAGCTTCTTTTGTAAAGAACTCCAGCTTCCTTTTACTCATGAGCATCCGTG
2481 GAAGAGCAAGTGCCCAGGTTACATTTGTTCTAGATGGAGGTCATTTAGCTCTCATTGCAGACACTGCTGAAAACATTGTG
2561 CAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCCTCCCCATCTCACCCCCAGCACACGCAGG
2641 GACTACTACCTGAGTCTGCAAAACACATAGCATTTTTGTCCGTGGATGGTACACAAAGCTCAATCTTTTTGTTTTCTTCT
2721 GGGGAAAAAATTAAATCTTTATATGTTAATATGATTGATATTCATTGTGCAAAAAAAATCAGTGTGTTTTTAAAGAAGTA
2801 TAAGGGAAAAGGAAAACTCATATGTCCTTCTGTCACTCTGAGACATACACTGGTAACATCTGTGCAAGCCCCTTTCCAGG
2881 ATTCTGAATGTACAGTATATATGAATGCATACACAGAGAAATTTACATTCAAGAGTGTACTATACTTGTTCTTCTATAAC
2961 ATCAGAAATAGGTTTTTACTCAGATGTCTTCATGTCGGTAATTATAGAACTACATAATTATTTTTATAGCTGTATTATGT
3041 AGATTTAACAGGTTCCTCATTGATAAAACAATGTTTTTTTGGTTGTTTATTCAGTATCTGAATAACGTTTCTATGGACAT
3121 CTGTAAACATGTATGAGGGGACTTTTAAAAGTTCATGGAAAATGGAATTAAAAGAAAAATAAAAAAATATAAACTTTATT
3201 TCTCAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' uacaucCGGAAAUCUAGUGAa 5'
                ||  ||| |||||| 
Target 5' ccgactGCGGTTATATCACTa 3'
319 - 339 127.00 -7.50
2
miRNA  3' uacAUCCGGAAAU-------CUAGUGaa 5'
             ||| ::| |:       ||||||  
Target 5' tttTAGTTTTGTGAATGGATGATCACaa 3'
2161 - 2188 122.00 -6.90
3
miRNA  3' uacaucCGGAA--AUC-UAGUGAa 5'
                |:|||   || |||||| 
Target 5' gtgcttGTCTTAGAAGTATCACTg 3'
262 - 285 121.00 -8.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN15624805 4 COSMIC
COSN31598580 16 COSMIC
COSN30166388 30 COSMIC
COSN14119493 54 COSMIC
COSN31609464 443 COSMIC
COSN23405176 510 COSMIC
COSN31570161 643 COSMIC
COSN26584703 652 COSMIC
COSN30539439 771 COSMIC
COSN28821202 822 COSMIC
COSN20091014 863 COSMIC
COSN6841808 883 COSMIC
COSN26636069 987 COSMIC
COSN15103721 1017 COSMIC
COSN15743656 1318 COSMIC
COSN5156069 1548 COSMIC
COSN31483601 1656 COSMIC
COSN16708035 1660 COSMIC
COSN31565590 1682 COSMIC
COSN16607571 1684 COSMIC
COSN31551611 1696 COSMIC
COSN31528950 1697 COSMIC
COSN31484126 1699 COSMIC
COSN30173008 1870 COSMIC
COSN9050913 1976 COSMIC
COSN31490367 2011 COSMIC
COSN31595289 2097 COSMIC
COSN26870032 2110 COSMIC
COSN31595086 2228 COSMIC
COSN31585437 2384 COSMIC
COSN31534676 2389 COSMIC
COSN31584386 2422 COSMIC
COSN1300214 2573 COSMIC
COSN2042622 3005 COSMIC
COSN28466221 3014 COSMIC
COSN6841814 3192 COSMIC
rs3733606 320 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs766659505 6 dbSNP
rs753953627 7 dbSNP
rs1232768758 8 dbSNP
rs909840564 14 dbSNP
rs755202629 15 dbSNP
rs887201564 17 dbSNP
rs201213140 27 dbSNP
rs753104288 28 dbSNP
rs1196983940 36 dbSNP
rs376757364 40 dbSNP
rs1314234396 41 dbSNP
rs1274671757 42 dbSNP
rs566919353 43 dbSNP
rs370059420 44 dbSNP
rs745386669 53 dbSNP
rs141301026 54 dbSNP
rs1279677699 57 dbSNP
rs1311558023 66 dbSNP
rs575912473 74 dbSNP
rs895830119 75 dbSNP
rs997995837 77 dbSNP
rs1051861111 78 dbSNP
rs1324951866 80 dbSNP
rs1461780752 82 dbSNP
rs1375420820 84 dbSNP
rs1167211825 85 dbSNP
rs1012907643 86 dbSNP
rs1300222164 88 dbSNP
rs1371635765 89 dbSNP
rs1222791977 90 dbSNP
rs1407312099 95 dbSNP
rs890530212 96 dbSNP
rs1301610682 101 dbSNP
rs1349415405 102 dbSNP
rs1007587565 104 dbSNP
rs1018018249 106 dbSNP
rs1251696973 107 dbSNP
rs1193327173 119 dbSNP
rs1469217728 120 dbSNP
rs544555615 124 dbSNP
rs1213187353 134 dbSNP
rs1023238172 135 dbSNP
rs1316005790 139 dbSNP
rs1284337342 165 dbSNP
rs1225024667 170 dbSNP
rs554774777 172 dbSNP
rs1302590220 183 dbSNP
rs574684971 183 dbSNP
rs1372938012 184 dbSNP
rs1483313980 184 dbSNP
rs1286949229 185 dbSNP
rs747370313 186 dbSNP
rs1206581923 190 dbSNP
rs1437692626 192 dbSNP
rs968938156 204 dbSNP
rs1480196585 217 dbSNP
rs1000370383 226 dbSNP
rs1180668454 231 dbSNP
rs547238810 241 dbSNP
rs1271480486 246 dbSNP
rs1393768180 248 dbSNP
rs1031902150 252 dbSNP
rs540376301 257 dbSNP
rs1455124250 263 dbSNP
rs1255248347 270 dbSNP
rs769071140 286 dbSNP
rs1031808357 287 dbSNP
rs956223108 292 dbSNP
rs560218949 293 dbSNP
rs1242347684 295 dbSNP
rs912293120 296 dbSNP
rs3733606 320 dbSNP
rs549446765 321 dbSNP
rs1171787054 322 dbSNP
rs1350048303 327 dbSNP
rs975019018 327 dbSNP
rs979827670 328 dbSNP
rs546194293 332 dbSNP
rs1361453138 343 dbSNP
rs1410954206 346 dbSNP
rs770233513 348 dbSNP
rs1401873539 350 dbSNP
rs773309719 351 dbSNP
rs1373689700 352 dbSNP
rs374942466 355 dbSNP
rs973078862 357 dbSNP
rs918477538 363 dbSNP
rs933839616 366 dbSNP
rs375744290 373 dbSNP
rs1442018663 377 dbSNP
rs1326132732 381 dbSNP
rs1419741460 382 dbSNP
rs1195425245 384 dbSNP
rs1474049013 386 dbSNP
rs1463749275 394 dbSNP
rs1256154805 399 dbSNP
rs1211053991 405 dbSNP
rs562711733 405 dbSNP
rs758246773 411 dbSNP
rs777923484 412 dbSNP
rs908411354 413 dbSNP
rs531663087 416 dbSNP
rs548172813 422 dbSNP
rs1307886060 424 dbSNP
rs762989589 432 dbSNP
rs943424304 435 dbSNP
rs1057470081 450 dbSNP
rs1270871811 452 dbSNP
rs147434239 456 dbSNP
rs201964930 460 dbSNP
rs1415486318 464 dbSNP
rs904542514 476 dbSNP
rs1222090457 477 dbSNP
rs568306790 479 dbSNP
rs1000174464 492 dbSNP
rs1274832900 498 dbSNP
rs139810643 501 dbSNP
rs183636575 502 dbSNP
rs1474014801 505 dbSNP
rs1044381248 508 dbSNP
rs571123042 528 dbSNP
rs892030467 538 dbSNP
rs13150401 546 dbSNP
rs904786596 548 dbSNP
rs570577342 549 dbSNP
rs1024421483 555 dbSNP
rs879047013 556 dbSNP
rs1031918426 559 dbSNP
rs1480943378 564 dbSNP
rs1252853097 567 dbSNP
rs1191991000 572 dbSNP
rs538796452 575 dbSNP
rs551612486 581 dbSNP
rs956427189 585 dbSNP
rs1332873266 589 dbSNP
rs1252389640 594 dbSNP
rs970166188 595 dbSNP
rs1475815268 604 dbSNP
rs539130938 608 dbSNP
rs1188795371 614 dbSNP
rs746875768 623 dbSNP
rs1391289709 624 dbSNP
rs145230900 634 dbSNP
rs1333720320 637 dbSNP
rs147621868 640 dbSNP
rs962705867 641 dbSNP
rs1165227589 644 dbSNP
rs975051448 645 dbSNP
rs1166045207 656 dbSNP
rs1397182875 659 dbSNP
rs920895330 669 dbSNP
rs1419584136 676 dbSNP
rs538568502 679 dbSNP
rs1467890233 682 dbSNP
rs1324823022 684 dbSNP
rs1326496063 687 dbSNP
rs554842132 688 dbSNP
rs139296857 689 dbSNP
rs1395877886 693 dbSNP
rs908444489 694 dbSNP
rs1361125125 708 dbSNP
rs1233850602 713 dbSNP
rs780131124 717 dbSNP
rs762837849 724 dbSNP
rs992654056 735 dbSNP
rs1439099097 737 dbSNP
rs911063127 741 dbSNP
rs1327046242 745 dbSNP
rs1332430702 753 dbSNP
rs1388150711 753 dbSNP
rs917326047 754 dbSNP
rs948750999 755 dbSNP
rs1382048301 762 dbSNP
rs1039543264 763 dbSNP
rs1453774277 767 dbSNP
rs1395423156 769 dbSNP
rs1044488808 773 dbSNP
rs1200816903 776 dbSNP
rs1453528508 778 dbSNP
rs1218099763 779 dbSNP
rs904560877 790 dbSNP
rs1475351688 794 dbSNP
rs540439684 800 dbSNP
rs1488671350 803 dbSNP
rs1288315885 807 dbSNP
rs749500564 811 dbSNP
rs3822268 822 dbSNP
rs1235902204 823 dbSNP
rs1053807221 826 dbSNP
rs187706016 827 dbSNP
rs1317232003 837 dbSNP
rs1382245776 844 dbSNP
rs536149290 847 dbSNP
rs118028430 855 dbSNP
rs900938958 857 dbSNP
rs562936582 860 dbSNP
rs1174046425 864 dbSNP
rs531600336 876 dbSNP
rs1474322848 879 dbSNP
rs1028010993 892 dbSNP
rs952411035 894 dbSNP
rs1265427757 903 dbSNP
rs1208897298 916 dbSNP
rs1485599939 918 dbSNP
rs752524973 926 dbSNP
rs760633708 928 dbSNP
rs1017122943 929 dbSNP
rs1337875256 941 dbSNP
rs1270027245 943 dbSNP
rs1218827839 946 dbSNP
rs961281596 947 dbSNP
rs993079993 954 dbSNP
rs1295115781 958 dbSNP
rs1375949910 961 dbSNP
rs1353323983 962 dbSNP
rs1025305735 963 dbSNP
rs1408187968 963 dbSNP
rs954988932 965 dbSNP
rs1168354899 969 dbSNP
rs542197503 975 dbSNP
rs550824455 976 dbSNP
rs1474936853 980 dbSNP
rs1351615064 987 dbSNP
rs527547824 1004 dbSNP
rs1272734684 1006 dbSNP
rs1199728159 1015 dbSNP
rs979271763 1017 dbSNP
rs1488014012 1026 dbSNP
rs774530742 1028 dbSNP
rs1270919776 1033 dbSNP
rs547632424 1036 dbSNP
rs1285490039 1037 dbSNP
rs1379238976 1037 dbSNP
rs1035283973 1039 dbSNP
rs112171924 1039 dbSNP
rs1439932748 1040 dbSNP
rs958366189 1044 dbSNP
rs926012725 1047 dbSNP
rs1484879593 1048 dbSNP
rs1013055520 1055 dbSNP
rs1187617560 1057 dbSNP
rs935998564 1058 dbSNP
rs1364767752 1062 dbSNP
rs1470919380 1063 dbSNP
rs1053101520 1064 dbSNP
rs748566877 1065 dbSNP
rs892044301 1067 dbSNP
rs926071417 1069 dbSNP
rs1434870188 1074 dbSNP
rs1314610878 1076 dbSNP
rs1373610102 1087 dbSNP
rs944942857 1088 dbSNP
rs1469040195 1089 dbSNP
rs936093729 1092 dbSNP
rs1053100536 1093 dbSNP
rs1041019237 1106 dbSNP
rs1212649870 1107 dbSNP
rs555781787 1107 dbSNP
rs111246071 1108 dbSNP
rs1221594890 1113 dbSNP
rs1349789686 1116 dbSNP
rs376909076 1119 dbSNP
rs1278065044 1121 dbSNP
rs1241981542 1124 dbSNP
rs1353076197 1126 dbSNP
rs747671033 1127 dbSNP
rs1005634504 1134 dbSNP
rs1015227303 1135 dbSNP
rs150012948 1137 dbSNP
rs192733036 1138 dbSNP
rs535109494 1139 dbSNP
rs969906334 1143 dbSNP
rs1179218200 1151 dbSNP
rs993924172 1152 dbSNP
rs1025356541 1153 dbSNP
rs749652122 1153 dbSNP
rs548532050 1154 dbSNP
rs568432344 1157 dbSNP
rs1445936308 1158 dbSNP
rs371354414 1166 dbSNP
rs1018230182 1171 dbSNP
rs867443293 1172 dbSNP
rs963993629 1175 dbSNP
rs957402658 1179 dbSNP
rs1168439351 1180 dbSNP
rs989226269 1181 dbSNP
rs1368492621 1182 dbSNP
rs1276861925 1183 dbSNP
rs1428946076 1184 dbSNP
rs1359947471 1186 dbSNP
rs1398354902 1187 dbSNP
rs913266012 1190 dbSNP
rs1422049536 1192 dbSNP
rs1374190213 1205 dbSNP
rs750033826 1218 dbSNP
rs1434153477 1223 dbSNP
rs1389532250 1234 dbSNP
rs1327067801 1235 dbSNP
rs1376506856 1236 dbSNP
rs979710144 1237 dbSNP
rs944686482 1241 dbSNP
rs1484615492 1242 dbSNP
rs1040658789 1249 dbSNP
rs553973974 1252 dbSNP
rs922160355 1258 dbSNP
rs1313718646 1277 dbSNP
rs932171509 1282 dbSNP
rs758142703 1283 dbSNP
rs1278861572 1284 dbSNP
rs1401929360 1296 dbSNP
rs1354074027 1298 dbSNP
rs1252475271 1302 dbSNP
rs956706044 1302 dbSNP
rs988874577 1307 dbSNP
rs913289436 1309 dbSNP
rs577353082 1311 dbSNP
rs1195126127 1329 dbSNP
rs1473957519 1330 dbSNP
rs1255324670 1334 dbSNP
rs888206267 1335 dbSNP
rs1484233927 1337 dbSNP
rs539964382 1338 dbSNP
rs1203577742 1339 dbSNP
rs1005337631 1357 dbSNP
rs1317454842 1366 dbSNP
rs1258985457 1370 dbSNP
rs1037188841 1372 dbSNP
rs556384843 1373 dbSNP
rs1397113805 1378 dbSNP
rs748501931 1384 dbSNP
rs1296750657 1389 dbSNP
rs1446512398 1391 dbSNP
rs1432155401 1392 dbSNP
rs896839068 1394 dbSNP
rs16839443 1395 dbSNP
rs1024238868 1407 dbSNP
rs927574462 1420 dbSNP
rs1367377600 1422 dbSNP
rs937599234 1427 dbSNP
rs1425428219 1431 dbSNP
rs1248336232 1433 dbSNP
rs1177737551 1437 dbSNP
rs1458067204 1448 dbSNP
rs1239834832 1449 dbSNP
rs1038991322 1451 dbSNP
rs542260155 1453 dbSNP
rs1467359021 1457 dbSNP
rs1264921639 1459 dbSNP
rs1245625181 1460 dbSNP
rs898663881 1461 dbSNP
rs866667604 1466 dbSNP
rs1394944976 1467 dbSNP
rs184758977 1475 dbSNP
rs1239812541 1477 dbSNP
rs1378080326 1489 dbSNP
rs1046877377 1490 dbSNP
rs890863676 1492 dbSNP
rs1007937351 1493 dbSNP
rs1293537326 1504 dbSNP
rs1001370630 1507 dbSNP
rs1361947478 1507 dbSNP
rs572395256 1509 dbSNP
rs1440286824 1510 dbSNP
rs1381931844 1511 dbSNP
rs1191574420 1512 dbSNP
rs376971112 1518 dbSNP
rs1032810876 1525 dbSNP
rs957423694 1534 dbSNP
rs1266945636 1555 dbSNP
rs1489518483 1560 dbSNP
rs899463168 1563 dbSNP
rs1000793309 1568 dbSNP
rs1311845433 1569 dbSNP
rs988949918 1576 dbSNP
rs1330112362 1579 dbSNP
rs1386321773 1583 dbSNP
rs149139039 1587 dbSNP
rs966085768 1588 dbSNP
rs544752932 1589 dbSNP
rs536662589 1591 dbSNP
rs778199572 1592 dbSNP
rs932203190 1596 dbSNP
rs564344807 1597 dbSNP
rs1335931838 1602 dbSNP
rs1377233170 1607 dbSNP
rs1215164260 1608 dbSNP
rs1435172299 1610 dbSNP
rs1270960359 1616 dbSNP
rs1049294911 1621 dbSNP
rs927321839 1628 dbSNP
rs749807763 1629 dbSNP
rs532977185 1631 dbSNP
rs1199045315 1632 dbSNP
rs7435312 1637 dbSNP
rs1256998792 1648 dbSNP
rs1234962210 1651 dbSNP
rs774925815 1651 dbSNP
rs930153672 1651 dbSNP
rs1400081896 1652 dbSNP
rs1047261535 1653 dbSNP
rs1491042171 1654 dbSNP
rs754836049 1654 dbSNP
rs1192993414 1656 dbSNP
rs1413885943 1656 dbSNP
rs1478203538 1656 dbSNP
rs896867387 1656 dbSNP
rs1491435737 1658 dbSNP
rs1491574797 1659 dbSNP
rs1186013065 1660 dbSNP
rs1335864330 1660 dbSNP
rs1341009694 1660 dbSNP
rs1447192529 1660 dbSNP
rs146331663 1660 dbSNP
rs201195465 1660 dbSNP
rs61021076 1660 dbSNP
rs796981308 1660 dbSNP
rs878908932 1660 dbSNP
rs943779366 1661 dbSNP
rs1170208508 1662 dbSNP
rs1466370826 1662 dbSNP
rs528923824 1662 dbSNP
rs1457614085 1663 dbSNP
rs1045384533 1664 dbSNP
rs1387240684 1665 dbSNP
rs905786070 1666 dbSNP
rs1472726323 1670 dbSNP
rs1380969533 1676 dbSNP
rs1190006497 1677 dbSNP
rs1298184286 1678 dbSNP
rs1456735090 1678 dbSNP
rs1000911212 1680 dbSNP
rs1237929405 1680 dbSNP
rs1287058290 1680 dbSNP
rs1458864958 1680 dbSNP
rs569754323 1680 dbSNP
rs1491564824 1682 dbSNP
rs189471385 1682 dbSNP
rs892364916 1682 dbSNP
rs565315145 1684 dbSNP
rs1032926893 1685 dbSNP
rs1438430116 1686 dbSNP
rs145140392 1686 dbSNP
rs547675153 1687 dbSNP
rs1020387393 1688 dbSNP
rs1491267480 1688 dbSNP
rs1220121950 1689 dbSNP
rs1291450170 1689 dbSNP
rs1491547234 1689 dbSNP
rs542166462 1690 dbSNP
rs966486038 1690 dbSNP
rs1034822461 1691 dbSNP
rs569420348 1692 dbSNP
rs539652817 1693 dbSNP
rs953378749 1694 dbSNP
rs976379156 1694 dbSNP
rs985034122 1695 dbSNP
rs571163937 1696 dbSNP
rs576482447 1697 dbSNP
rs972617026 1698 dbSNP
rs1478188270 1699 dbSNP
rs370519308 1703 dbSNP
rs918344213 1709 dbSNP
rs1190889819 1714 dbSNP
rs1412839922 1716 dbSNP
rs949802870 1717 dbSNP
rs1487885666 1718 dbSNP
rs1423396780 1719 dbSNP
rs1218460573 1721 dbSNP
rs560510718 1723 dbSNP
rs752943685 1723 dbSNP
rs936373179 1723 dbSNP
rs1218863713 1724 dbSNP
rs892416790 1726 dbSNP
rs1285207309 1727 dbSNP
rs749984326 1735 dbSNP
rs182119376 1736 dbSNP
rs1299320657 1738 dbSNP
rs1433547559 1740 dbSNP
rs1418015522 1742 dbSNP
rs1046258004 1746 dbSNP
rs1175862235 1747 dbSNP
rs936972437 1748 dbSNP
rs1167874457 1749 dbSNP
rs1477224927 1755 dbSNP
rs1263337479 1764 dbSNP
rs1195720186 1770 dbSNP
rs572460000 1772 dbSNP
rs1376649709 1782 dbSNP
rs906391263 1783 dbSNP
rs1002416800 1791 dbSNP
rs1312952982 1793 dbSNP
rs1054387655 1797 dbSNP
rs758093427 1815 dbSNP
rs1265256344 1816 dbSNP
rs541383275 1824 dbSNP
rs1034465445 1827 dbSNP
rs1317337958 1830 dbSNP
rs564228679 1833 dbSNP
rs1417190343 1835 dbSNP
rs959042685 1839 dbSNP
rs577830539 1854 dbSNP
rs1377635229 1858 dbSNP
rs893020737 1866 dbSNP
rs1010073996 1868 dbSNP
rs543270257 1875 dbSNP
rs1328847201 1876 dbSNP
rs1308779328 1889 dbSNP
rs1464817915 1891 dbSNP
rs1423719686 1892 dbSNP
rs951323729 1896 dbSNP
rs1412985083 1897 dbSNP
rs1182183229 1899 dbSNP
rs779900381 1904 dbSNP
rs997598005 1907 dbSNP
rs563472204 1910 dbSNP
rs983050735 1912 dbSNP
rs1196978034 1913 dbSNP
rs1457526962 1914 dbSNP
rs912790935 1917 dbSNP
rs1229704052 1918 dbSNP
rs753090982 1919 dbSNP
rs953411248 1921 dbSNP
rs1320400249 1929 dbSNP
rs984725226 1935 dbSNP
rs1238855953 1936 dbSNP
rs1312666628 1936 dbSNP
rs1280445646 1939 dbSNP
rs1229447894 1941 dbSNP
rs1349916140 1949 dbSNP
rs1208645338 1950 dbSNP
rs1385401352 1951 dbSNP
rs1236624769 1955 dbSNP
rs965566037 1965 dbSNP
rs1400592964 1970 dbSNP
rs1299322130 1976 dbSNP
rs1455952921 1978 dbSNP
rs1348842941 1983 dbSNP
rs1165354892 1984 dbSNP
rs761189507 1987 dbSNP
rs1480869732 1995 dbSNP
rs975968053 2000 dbSNP
rs1016532523 2002 dbSNP
rs1251549164 2012 dbSNP
rs528982301 2016 dbSNP
rs1197584759 2018 dbSNP
rs1487536407 2020 dbSNP
rs936410055 2030 dbSNP
rs1222949091 2031 dbSNP
rs1053506059 2032 dbSNP
rs1362294055 2033 dbSNP
rs1307458600 2041 dbSNP
rs1239883888 2043 dbSNP
rs1377132407 2044 dbSNP
rs913571012 2049 dbSNP
rs1437886353 2055 dbSNP
rs1366283660 2056 dbSNP
rs962566118 2057 dbSNP
rs945017540 2063 dbSNP
rs1358551725 2072 dbSNP
rs548653102 2076 dbSNP
rs1157780870 2083 dbSNP
rs972264415 2085 dbSNP
rs1395806823 2090 dbSNP
rs1046310026 2092 dbSNP
rs906445174 2093 dbSNP
rs1184218901 2100 dbSNP
rs1266749044 2119 dbSNP
rs558965034 2119 dbSNP
rs1200249404 2122 dbSNP
rs1358938855 2125 dbSNP
rs1055359610 2127 dbSNP
rs756368118 2128 dbSNP
rs1216582942 2131 dbSNP
rs898966588 2144 dbSNP
rs996001326 2150 dbSNP
rs1230592079 2154 dbSNP
rs949528637 2162 dbSNP
rs981211837 2170 dbSNP
rs927000754 2177 dbSNP
rs1338267807 2185 dbSNP
rs1297484799 2187 dbSNP
rs1374134273 2197 dbSNP
rs1386869005 2215 dbSNP
rs1400584676 2215 dbSNP
rs937009881 2219 dbSNP
rs1054490841 2220 dbSNP
rs1464682647 2227 dbSNP
rs1377290749 2230 dbSNP
rs951374079 2232 dbSNP
rs11549294 2235 dbSNP
rs893062469 2236 dbSNP
rs1231974227 2243 dbSNP
rs1277913541 2244 dbSNP
rs945989779 2245 dbSNP
rs140733483 2258 dbSNP
rs966011267 2265 dbSNP
rs901699136 2269 dbSNP
rs997293784 2274 dbSNP
rs1029044830 2278 dbSNP
rs889173057 2281 dbSNP
rs1178266272 2284 dbSNP
rs1277099779 2288 dbSNP
rs921440864 2296 dbSNP
rs1328147064 2298 dbSNP
rs1006178253 2305 dbSNP
rs1016643266 2306 dbSNP
rs962064112 2307 dbSNP
rs1471116742 2312 dbSNP
rs994194508 2323 dbSNP
rs945071799 2330 dbSNP
rs981722824 2331 dbSNP
rs528035626 2334 dbSNP
rs1411034473 2335 dbSNP
rs1172936054 2336 dbSNP
rs927921004 2341 dbSNP
rs1244178237 2348 dbSNP
rs937935168 2348 dbSNP
rs778216010 2352 dbSNP
rs1256808780 2354 dbSNP
rs1456215792 2354 dbSNP
rs970914400 2357 dbSNP
rs1195879313 2358 dbSNP
rs1464726098 2358 dbSNP
rs11549293 2362 dbSNP
rs1396028201 2367 dbSNP
rs1341340125 2368 dbSNP
rs899015031 2369 dbSNP
rs1433729111 2370 dbSNP
rs10138 2389 dbSNP
rs1274158855 2390 dbSNP
rs980912429 2397 dbSNP
rs1383251658 2400 dbSNP
rs927031447 2402 dbSNP
rs1454729268 2406 dbSNP
rs749709285 2408 dbSNP
rs958409068 2409 dbSNP
rs989907499 2418 dbSNP
rs914260001 2424 dbSNP
rs1330711327 2428 dbSNP
rs930465536 2430 dbSNP
rs1048539088 2431 dbSNP
rs1161941775 2439 dbSNP
rs1472798569 2442 dbSNP
rs145780803 2449 dbSNP
rs1386238437 2451 dbSNP
rs1185831498 2453 dbSNP
rs887173176 2460 dbSNP
rs945712602 2460 dbSNP
rs1204549364 2470 dbSNP
rs1004256850 2471 dbSNP
rs1019617198 2475 dbSNP
rs1209150290 2478 dbSNP
rs184495193 2479 dbSNP
rs1274082298 2488 dbSNP
rs997509992 2493 dbSNP
rs1237724753 2494 dbSNP
rs923159452 2497 dbSNP
rs533647632 2498 dbSNP
rs1050179156 2508 dbSNP
rs550135015 2517 dbSNP
rs1337611222 2520 dbSNP
rs1219398943 2523 dbSNP
rs772810359 2524 dbSNP
rs989592834 2530 dbSNP
rs570243499 2535 dbSNP
rs1165819645 2538 dbSNP
rs1421920098 2539 dbSNP
rs1380130738 2542 dbSNP
rs1177396047 2544 dbSNP
rs148144524 2553 dbSNP
rs1165160636 2561 dbSNP
rs1006752789 2564 dbSNP
rs73199929 2570 dbSNP
rs1322266191 2577 dbSNP
rs778936730 2577 dbSNP
rs1214418572 2579 dbSNP
rs1352670689 2580 dbSNP
rs897845772 2582 dbSNP
rs993500620 2585 dbSNP
rs1367321862 2587 dbSNP
rs189634187 2589 dbSNP
rs6841329 2591 dbSNP
rs937671285 2595 dbSNP
rs6841334 2604 dbSNP
rs150115811 2606 dbSNP
rs1033879848 2607 dbSNP
rs577884534 2608 dbSNP
rs1233723281 2624 dbSNP
rs1344970405 2624 dbSNP
rs1160303196 2625 dbSNP
rs1402015101 2627 dbSNP
rs1422658515 2629 dbSNP
rs1171429620 2636 dbSNP
rs758939839 2637 dbSNP
rs940094541 2640 dbSNP
rs1487956885 2641 dbSNP
rs1217687105 2642 dbSNP
rs1448921479 2642 dbSNP
rs553641921 2642 dbSNP
rs1041110847 2645 dbSNP
rs543683398 2646 dbSNP
rs775644493 2648 dbSNP
rs1358684925 2657 dbSNP
rs531171716 2660 dbSNP
rs901187154 2668 dbSNP
rs1226824906 2673 dbSNP
rs1289166184 2682 dbSNP
rs1447712382 2683 dbSNP
rs990327474 2687 dbSNP
rs536488995 2693 dbSNP
rs967459916 2700 dbSNP
rs150909015 2712 dbSNP
rs765031070 2712 dbSNP
rs977093418 2722 dbSNP
rs1470054816 2725 dbSNP
rs1430767460 2726 dbSNP
rs573492182 2728 dbSNP
rs1427783783 2729 dbSNP
rs1420184327 2731 dbSNP
rs923195415 2732 dbSNP
rs1188000748 2737 dbSNP
rs966812958 2738 dbSNP
rs371542453 2742 dbSNP
rs1034749542 2744 dbSNP
rs1260095489 2758 dbSNP
rs959327861 2764 dbSNP
rs1471569614 2768 dbSNP
rs1162301583 2770 dbSNP
rs1265011776 2771 dbSNP
rs920548619 2771 dbSNP
rs990482915 2771 dbSNP
rs572522678 2779 dbSNP
rs1296887778 2781 dbSNP
rs1216865621 2807 dbSNP
rs559028182 2812 dbSNP
rs181768409 2820 dbSNP
rs1415354660 2822 dbSNP
rs944499256 2824 dbSNP
rs1314409874 2827 dbSNP
rs1041537990 2829 dbSNP
rs1328643780 2835 dbSNP
rs1461067735 2836 dbSNP
rs544699029 2838 dbSNP
rs1365243105 2839 dbSNP
rs1172406712 2846 dbSNP
rs546513374 2847 dbSNP
rs1038220408 2853 dbSNP
rs1183973710 2859 dbSNP
rs1445422124 2867 dbSNP
rs1245222498 2868 dbSNP
rs1175750574 2869 dbSNP
rs1480329153 2876 dbSNP
rs897880733 2902 dbSNP
rs1252030651 2904 dbSNP
rs1351454778 2910 dbSNP
rs1320453227 2911 dbSNP
rs1242468066 2915 dbSNP
rs993908451 2922 dbSNP
rs1284003229 2923 dbSNP
rs564874850 2924 dbSNP
rs1384484122 2934 dbSNP
rs376644219 2943 dbSNP
rs367768954 2944 dbSNP
rs1306606776 2945 dbSNP
rs1353569596 2946 dbSNP
rs533487607 2949 dbSNP
rs1258637260 2950 dbSNP
rs906523361 2952 dbSNP
rs550437445 2953 dbSNP
rs570307947 2955 dbSNP
rs894005664 2957 dbSNP
rs185379628 2960 dbSNP
rs768275398 2975 dbSNP
rs549560061 2982 dbSNP
rs1163927663 2988 dbSNP
rs138360715 2995 dbSNP
rs115648167 2997 dbSNP
rs557897581 2998 dbSNP
rs571600199 3006 dbSNP
rs536987672 3015 dbSNP
rs1251260965 3020 dbSNP
rs1179034758 3026 dbSNP
rs1175502749 3028 dbSNP
rs1268831520 3036 dbSNP
rs1029989902 3043 dbSNP
rs1362000545 3045 dbSNP
rs1399791830 3057 dbSNP
rs762608582 3059 dbSNP
rs1237864069 3060 dbSNP
rs986035531 3061 dbSNP
rs1333730368 3065 dbSNP
rs1336530048 3066 dbSNP
rs1384590090 3071 dbSNP
rs1012361625 3072 dbSNP
rs1303653899 3073 dbSNP
rs1307097596 3073 dbSNP
rs1358371987 3074 dbSNP
rs570965658 3074 dbSNP
rs1235654387 3082 dbSNP
rs1288083530 3082 dbSNP
rs1258360565 3083 dbSNP
rs1343280310 3084 dbSNP
rs557219412 3085 dbSNP
rs1274182712 3086 dbSNP
rs1364633655 3086 dbSNP
rs1458767147 3090 dbSNP
rs758273219 3093 dbSNP
rs1161321186 3096 dbSNP
rs951652371 3102 dbSNP
rs1237017997 3106 dbSNP
rs1428737825 3108 dbSNP
rs34772144 3108 dbSNP
rs973222297 3114 dbSNP
rs751116769 3117 dbSNP
rs754682848 3119 dbSNP
rs6828784 3123 dbSNP
rs1204924081 3124 dbSNP
rs1477670609 3129 dbSNP
rs1262099151 3134 dbSNP
rs1221347923 3141 dbSNP
rs1322212354 3143 dbSNP
rs1283429985 3156 dbSNP
rs1225202428 3159 dbSNP
rs1338339621 3163 dbSNP
rs929440919 3170 dbSNP
rs975920953 3170 dbSNP
rs1168244793 3173 dbSNP
rs1398375587 3177 dbSNP
rs1290826073 3180 dbSNP
rs1467328416 3181 dbSNP
rs922715620 3181 dbSNP
rs932742530 3187 dbSNP
rs1046512975 3188 dbSNP
rs1050234702 3188 dbSNP
rs1329631251 3190 dbSNP
rs906554363 3191 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545213. RNA binding protein: AGO2. Condition:Control ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
CLIP-seq Support 1 for dataset GSM545213
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / Control
Location of target site ENST00000425103.1 | 3UTR | CACUACAGUGACGAUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
HNSC -0.659 0.05 -0.679 0.05 7 Click to see details
BLCA 0.821 0.19 1.000 0.5 3 Click to see details
BRCA 0.806 0.2 0.500 0.33 3 Click to see details
UCEC 0.439 0.36 0.500 0.33 3 Click to see details
UCEC 0.439 0.36 0.500 0.33 3 Click to see details
UCEC 0.439 0.36 0.500 0.33 3 Click to see details
UCEC 0.439 0.36 0.500 0.33 3 Click to see details
UCEC 0.439 0.36 0.500 0.33 3 Click to see details
109 hsa-miR-1245a Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT006574 BRCA2 BRCA2, DNA repair associated 2 1
MIRT055432 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 2
MIRT063879 RASSF8 Ras association domain family member 8 2 6
MIRT077025 WIPF2 WAS/WASL interacting protein family member 2 2 2
MIRT095775 GRPEL2 GrpE like 2, mitochondrial 2 10
MIRT099172 MAP3K4 mitogen-activated protein kinase kinase kinase 4 2 2
MIRT175616 OCRL OCRL, inositol polyphosphate-5-phosphatase 2 2
MIRT456518 LYPLAL1 lysophospholipase like 1 2 2
MIRT464457 UGCG UDP-glucose ceramide glucosyltransferase 2 2
MIRT465747 TMPPE transmembrane protein with metallophosphoesterase domain 2 2
MIRT468257 SFXN4 sideroflexin 4 2 2
MIRT469216 RICTOR RPTOR independent companion of MTOR complex 2 2 2
MIRT472045 NPAT nuclear protein, coactivator of histone transcription 2 2
MIRT481795 APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 2 2
MIRT500154 CREBBP CREB binding protein 2 2
MIRT506514 MSANTD4 Myb/SANT DNA binding domain containing 4 with coiled-coils 2 4
MIRT506915 KBTBD8 kelch repeat and BTB domain containing 8 2 6
MIRT513901 GRB10 growth factor receptor bound protein 10 2 6
MIRT519128 ALDH2 aldehyde dehydrogenase 2 family (mitochondrial) 2 2
MIRT528121 FOXH1 forkhead box H1 2 2
MIRT528942 SFMBT2 Scm like with four mbt domains 2 2 2
MIRT540580 CEP89 centrosomal protein 89 2 2
MIRT545858 ZNF264 zinc finger protein 264 2 4
MIRT547147 PGM3 phosphoglucomutase 3 2 2
MIRT547434 MED4 mediator complex subunit 4 2 2
MIRT554650 ROBO1 roundabout guidance receptor 1 2 2
MIRT558524 CSRNP3 cysteine and serine rich nuclear protein 3 2 2
MIRT559762 ABHD5 abhydrolase domain containing 5 2 2
MIRT560438 GOLGA7B golgin A7 family member B 2 2
MIRT561974 LRRC59 leucine rich repeat containing 59 2 2
MIRT562442 DDIT4 DNA damage inducible transcript 4 2 2
MIRT563489 ZWINT ZW10 interacting kinetochore protein 2 2
MIRT568265 BMP2K BMP2 inducible kinase 2 2
MIRT572522 KIAA0232 KIAA0232 2 2
MIRT612801 LSM14A LSM14A, mRNA processing body assembly factor 2 2
MIRT621533 ZNF507 zinc finger protein 507 2 2
MIRT625205 GSTCD glutathione S-transferase C-terminal domain containing 2 2
MIRT625615 ZNF84 zinc finger protein 84 2 2
MIRT629215 C12orf66 chromosome 12 open reading frame 66 2 2
MIRT629509 AS3MT arsenite methyltransferase 2 2
MIRT629769 STK25 serine/threonine kinase 25 2 2
MIRT630908 GATAD1 GATA zinc finger domain containing 1 2 2
MIRT632508 RAB13 RAB13, member RAS oncogene family 2 2
MIRT636871 ARSE arylsulfatase E (chondrodysplasia punctata 1) 2 2
MIRT637106 CXorf23 BCLAF1 and THRAP3 family member 3 2 2
MIRT637332 FAM9B family with sequence similarity 9 member B 2 2
MIRT637553 CHST6 carbohydrate sulfotransferase 6 2 2
MIRT637639 ZNF431 zinc finger protein 431 2 2
MIRT637836 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT638326 RNF11 ring finger protein 11 2 2
MIRT638393 RAB11FIP1 RAB11 family interacting protein 1 2 2
MIRT642450 CLUAP1 clusterin associated protein 1 2 2
MIRT642616 APOPT1 apoptogenic 1, mitochondrial 2 2
MIRT643133 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT644324 NFKBID NFKB inhibitor delta 2 2
MIRT645150 DIS3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease 2 2
MIRT645673 ADK adenosine kinase 2 2
MIRT646091 MGST3 microsomal glutathione S-transferase 3 2 2
MIRT646858 SLC35E4 solute carrier family 35 member E4 2 2
MIRT650153 ZNF426 zinc finger protein 426 2 2
MIRT652483 TMEM181 transmembrane protein 181 2 2
MIRT653790 SIRPA signal regulatory protein alpha 2 2
MIRT655526 PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 2 2
MIRT657077 JPH2 junctophilin 2 2 2
MIRT657322 HOOK3 hook microtubule tethering protein 3 2 2
MIRT662036 FUT2 fucosyltransferase 2 2 2
MIRT662322 ADM2 adrenomedullin 2 2 2
MIRT663211 DARS2 aspartyl-tRNA synthetase 2, mitochondrial 2 2
MIRT663559 CCR6 C-C motif chemokine receptor 6 2 2
MIRT663937 ZNF554 zinc finger protein 554 2 2
MIRT664689 EIF2B2 eukaryotic translation initiation factor 2B subunit beta 2 2
MIRT664709 PAICS phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase 2 2
MIRT665291 ZFP14 ZFP14 zinc finger protein 2 2
MIRT665572 TXNL1 thioredoxin like 1 2 2
MIRT667068 PAOX polyamine oxidase 2 2
MIRT667304 MYO5A myosin VA 2 2
MIRT667442 METTL14 methyltransferase like 14 2 2
MIRT668048 GTPBP10 GTP binding protein 10 2 2
MIRT669604 AGO3 argonaute 3, RISC catalytic component 2 2
MIRT671088 ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 2 2
MIRT674361 SLC35E3 solute carrier family 35 member E3 2 2
MIRT674962 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT676394 SEC24D SEC24 homolog D, COPII coat complex component 2 2
MIRT676819 AGMAT agmatinase 2 2
MIRT676891 ENSA endosulfine alpha 2 2
MIRT677059 ZNF34 zinc finger protein 34 2 2
MIRT678424 ANKRD36 ankyrin repeat domain 36 2 2
MIRT678735 SRCAP Snf2 related CREBBP activator protein 2 2
MIRT678930 XPOT exportin for tRNA 2 2
MIRT678954 MYADM myeloid associated differentiation marker 2 2
MIRT679228 MAN2A2 mannosidase alpha class 2A member 2 2 2
MIRT679765 TLR6 toll like receptor 6 2 2
MIRT681992 HRH4 histamine receptor H4 2 2
MIRT687405 NSUN4 NOP2/Sun RNA methyltransferase family member 4 2 2
MIRT694570 RBMXL1 RNA binding motif protein, X-linked like 1 2 2
MIRT698449 TM4SF1 transmembrane 4 L six family member 1 2 2
MIRT706406 HAS2 hyaluronan synthase 2 2 2
MIRT706582 ZNF432 zinc finger protein 432 2 2
MIRT706838 VHLL VHL like 2 2
MIRT706909 DVL3 dishevelled segment polarity protein 3 2 2
MIRT707052 TRPV2 transient receptor potential cation channel subfamily V member 2 2 2
MIRT708583 C11orf54 chromosome 11 open reading frame 54 2 2
MIRT708988 CABP4 calcium binding protein 4 2 2
MIRT713041 ADRA2B adrenoceptor alpha 2B 2 2
MIRT713731 SUCO SUN domain containing ossification factor 2 2
MIRT714968 RAB21 RAB21, member RAS oncogene family 2 2
MIRT717485 PDE4DIP phosphodiesterase 4D interacting protein 2 2
MIRT722826 KLK2 kallikrein related peptidase 2 2 2
MIRT723305 MOGAT1 monoacylglycerol O-acyltransferase 1 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-1245a Trametinib 11707110 NSC758246 approved resistant High Melanoma cell line (M14) (500nM)
hsa-miR-1245a Vemurafenib 42611257 NSC761431 approved resistant High Melanoma cell line (M14) (500nM)
hsa-miR-1245a Trametinib 11707110 NSC758246 approved resistant High Melanoma cell line (M14) (1uM)
hsa-miR-1245a Vemurafenib 42611257 NSC761431 approved resistant High Melanoma cell line (M14) (1uM)
hsa-miR-1245a Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-miR-1245a Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)

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