miRTarBase - #MIRT572802


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pre-miRNA Information
pre-miRNA hsa-mir-6509   
Genomic Coordinates chr7: 135206994 - 135207078
Description Homo sapiens miR-6509 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6509-3p
Sequence 52| UUCCACUGCCACUACCUAAUUU |73
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs778601614 1 dbSNP
rs754554776 3 dbSNP
rs767798995 3 dbSNP
rs145322812 4 dbSNP
rs773941257 5 dbSNP
rs768273593 9 dbSNP
rs984565062 12 dbSNP
rs748872915 13 dbSNP
rs774861125 14 dbSNP
rs13241975 20 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol PPP3CB   
Synonyms CALNA2, CALNB, CNA2, PP2Bbeta
Description protein phosphatase 3 catalytic subunit beta
Transcript NM_001142353   
Other Transcripts NM_001142354 , NM_021132   
Expression
Putative miRNA Targets on PPP3CB
3'UTR of PPP3CB
(miRNA target sites are highlighted)		 
>PPP3CB|NM_001142353|3'UTR
   1 CCCACTACTTCCCAGGGACTCTCACATCTCGGGCCCCAAATGGACAGATCACCCGAGGAGCTGGAGGGGTCGGCCAAGCT
  81 GACTGTAAATTTCACAGTCTCTCTGAAGAAACCATTGTGCTTCTGAGACCCTAGCCCCCTTCCTGGATGGAGGCTTGAGG
 161 GCCCTGGGACATGTGCTATCTGATAAGATTGGGTCATCGCTGCCAAGGTGGAGAGCAGTGAGCAAGGGGCTTGGGGCAAT
 241 TTCCAGTGGAGGGCATCCACACCTCCATTTTATGCTTGTGGTTCACACATTTAAGTTTACAAATCAGATTTCTTTTCCCC
 321 TTCAGTAGAATTAGATTTTGTTTTTCAATCATGATTTCAAATGCAATCCTAAGAGCTAATGTGGACTTTTCTTTTTCCAT
 401 GAAATGTCTTTAAAGGATGAATTAGCATGGTCTTAAAATACATTTCTGAGGTTACTAGCTGTATTTTGAATTGTGAGCAA
 481 AATGCCGAGAAACCCAGTTGGCATTTATACAAAATGTTGACCTCAGGTCTATAGTTCTTAAATGTGGCTAATTCTGTAAC
 561 ATAGTCTTGGTATTTTTTAATTATGAATGCATATCCTATTTCCAGGCAGGCTCTCTTACTTGAACACAAATCCAAAAACT
 641 AATTTAGAGTCTTTTTTGCCCAGATCTTTTAAGACTTACACCCCAGAGATTTAAGAAGAAAACCTCTAAATTTCAAAATT
 721 ATGAAGAATTACAGAATTACTCATTTAAGGTACTTTAAAAGAAGTTTGTACATTGTCAAAGTAAATTTTAATTCAAATCA
 801 TGTCTGTAAAACTTGACGTATTTTGTGTATGCATGTTTTCATTTTGCAAATATTTAATATATAGACCTATGATGTACAGG
 881 TACGACATGTATAGGTTACCTAGATGTTATGAGAAATTTTAGTTTATTGTGAGTACTCAAGTTGCTTAGAGAGCCACCAG
 961 GGTGATTTGCTGCTGGCTTTCTATCATTTTTATGTTTTAATGCAAAGGAAATTTTAAAATGTTCTGGAAGTGTTTTTGAT
1041 TAAGCAATGCAGCCTAGAAGCAATGGTTCTGTTCAATCATTCAGATGTTAGTGGAAGCATAAAAGTCAAGACTGCATGTT
1121 GAAACCTTTCTTTTGATAGTTACTGAACTGCTTGGTTAAACTAAATGGAACCATGTGCTAATTTTTCACAATTATTGACC
1201 TGTATTGATTGCCACTGTAGTTTGGTATTTCCCTTTACTTTGGTGGCCTGCTTCCCTCATGCCCTGGAATACAACTCAGA
1281 GCTCCAGGCAGCGGAACCATCTATTGTTTTGTTTGCCAGAAAGTGCACCCTGTATGGTCTCCTGTCTAAGTTGGAAATAT
1361 TATGCATGTGCAGGACTATTCGAGTATTTTATAAACAGTAGCACACAATAAATTCCATGCATGGGCCGCTGCTCCTATCT
1441 CTGTGTTGGGTTTTATTTGGAAGATGCAATCTGATTTGTCCTTTTGATGCAAATCAGAAAATCCTGTTACTAGAGCTGGG
1521 ATGTCCTCCGGAGATTATCTCGTGGATAGTTCATGGTAATTTGATTAATTAAATTCTTTATAAATTTTGCCTTAAAAAAA
1601 ACTTTTGTTATATACTTGTTTTACATGAGCATTAGTAACTGAGCACTAGAGGACTTTGAATGCCTACTGTAGGCCTCCTA
1681 AGTCTAATATTTAAGATCACTGTTTATTGTCTTTTAATTGAAAGAAAATATGTTATTGTCTAGAATTTTGTTATAGTGGT
1761 ATTGGGAATTTACTGGGTGTTCTAACAATAAGAAAAATATTAGTGATAATTGCAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' uuuAAUCC--AUCACCGUCACCUu 5'
             ||:||   | |  ||||||| 
Target 5' ggcTTGGGGCAATTTCCAGTGGAg 3'
 228 - 251 149.00 -14.14
2 
miRNA  3' uuUAAUCCAUC-ACCGUCACCUu 5'
            || |   || || :|||||| 
Target 5' caATCATTCAGATGTTAGTGGAa 3'
 1074 - 1096 136.00 -11.30
3 
miRNA  3' uuuaaUCCAUCAC-CGUCACcuu 5'
               ||||:| | ||||||   
Target 5' tgccaAGGTGGAGAGCAGTGagc 3'
 201 - 223 125.00 -16.90
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN26603909 4 COSMIC
COSN30151408 13 COSMIC
COSN26990198 31 COSMIC
COSN30118473 54 COSMIC
COSN31590994 117 COSMIC
COSN30129301 140 COSMIC
COSN31578941 147 COSMIC
COSN28198164 173 COSMIC
COSN31603169 199 COSMIC
COSN19319540 245 COSMIC
COSN31580020 265 COSMIC
COSN31607457 358 COSMIC
COSN26712339 373 COSMIC
COSN24303432 662 COSMIC
COSN10072477 742 COSMIC
COSN1500285 798 COSMIC
COSN31609292 913 COSMIC
COSN17963425 938 COSMIC
COSN28819582 949 COSMIC
COSN1122365 1115 COSMIC
COSN31538855 1142 COSMIC
COSN30355908 1151 COSMIC
COSN31573124 1171 COSMIC
COSN21353522 1412 COSMIC
COSN1500283 1432 COSMIC
COSN29382310 1580 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs778009184 1 dbSNP
rs142809630 2 dbSNP
rs751608335 4 dbSNP
rs1285746446 5 dbSNP
rs370087202 7 dbSNP
rs1165479829 12 dbSNP
rs758167874 15 dbSNP
rs750263168 16 dbSNP
rs199731655 17 dbSNP
rs756907370 23 dbSNP
rs200914721 26 dbSNP
rs371806368 27 dbSNP
rs1391814565 28 dbSNP
rs34869528 28 dbSNP
rs752666913 31 dbSNP
rs765283946 32 dbSNP
rs368078431 33 dbSNP
rs759767509 34 dbSNP
rs1238154923 36 dbSNP
rs1196739270 37 dbSNP
rs1177300721 40 dbSNP
rs774795240 42 dbSNP
rs908010559 54 dbSNP
rs1282939473 55 dbSNP
rs1252749013 57 dbSNP
rs1405770168 58 dbSNP
rs1196815540 66 dbSNP
rs1347543448 71 dbSNP
rs966923618 72 dbSNP
rs930857032 78 dbSNP
rs41306522 81 dbSNP
rs1185663717 83 dbSNP
rs980407213 84 dbSNP
rs1008362477 93 dbSNP
rs954204305 104 dbSNP
rs1470890806 105 dbSNP
rs1028526741 113 dbSNP
rs1381368640 115 dbSNP
rs1169535287 119 dbSNP
rs575942606 128 dbSNP
rs1449912693 134 dbSNP
rs995664597 135 dbSNP
rs1326587128 137 dbSNP
rs190365928 144 dbSNP
rs1226259114 147 dbSNP
rs1251061071 157 dbSNP
rs1316480987 174 dbSNP
rs3750574 196 dbSNP
rs753342135 198 dbSNP
rs955822477 199 dbSNP
rs1198734472 201 dbSNP
rs1263960791 203 dbSNP
rs867494925 215 dbSNP
rs1192784759 225 dbSNP
rs577665570 239 dbSNP
rs948521718 255 dbSNP
rs1481321345 295 dbSNP
rs915721878 308 dbSNP
rs1249078236 318 dbSNP
rs1468175494 322 dbSNP
rs1329154300 323 dbSNP
rs1290059562 324 dbSNP
rs1385082624 328 dbSNP
rs1381266580 348 dbSNP
rs1031444320 360 dbSNP
rs1338875499 361 dbSNP
rs1225798645 362 dbSNP
rs1284330156 364 dbSNP
rs999967944 366 dbSNP
rs1231733503 376 dbSNP
rs1251923736 385 dbSNP
rs1054335308 387 dbSNP
rs1262526537 390 dbSNP
rs1198050577 391 dbSNP
rs777436934 401 dbSNP
rs553070177 404 dbSNP
rs936738210 426 dbSNP
rs1261370143 429 dbSNP
rs996816226 440 dbSNP
rs1199799103 443 dbSNP
rs1428358103 451 dbSNP
rs925405302 455 dbSNP
rs142895453 461 dbSNP
rs201401629 461 dbSNP
rs1161244805 480 dbSNP
rs978064531 484 dbSNP
rs755719312 486 dbSNP
rs534664730 487 dbSNP
rs1363843192 489 dbSNP
rs1452490450 493 dbSNP
rs900464638 498 dbSNP
rs1366979045 509 dbSNP
rs987044791 510 dbSNP
rs1405194661 523 dbSNP
rs765838825 527 dbSNP
rs543958583 532 dbSNP
rs1345309783 544 dbSNP
rs1009366639 554 dbSNP
rs995716244 571 dbSNP
rs1238501344 572 dbSNP
rs1325947149 577 dbSNP
rs1047864184 578 dbSNP
rs1361790819 579 dbSNP
rs1223532186 584 dbSNP
rs930783401 598 dbSNP
rs1441601524 601 dbSNP
rs899365552 610 dbSNP
rs1178858599 613 dbSNP
rs1045040354 615 dbSNP
rs753532541 618 dbSNP
rs1330865460 625 dbSNP
rs1394200744 635 dbSNP
rs1417997075 641 dbSNP
rs949000283 645 dbSNP
rs916865753 646 dbSNP
rs1405167897 647 dbSNP
rs992525762 648 dbSNP
rs185029461 649 dbSNP
rs1470799304 650 dbSNP
rs1015359895 652 dbSNP
rs934352031 659 dbSNP
rs1446720625 666 dbSNP
rs1307118101 667 dbSNP
rs1385128345 673 dbSNP
rs1246949037 674 dbSNP
rs1003794684 679 dbSNP
rs1291380956 680 dbSNP
rs370952936 680 dbSNP
rs978515148 684 dbSNP
rs1251685794 690 dbSNP
rs968523028 692 dbSNP
rs1157920058 695 dbSNP
rs1045407719 712 dbSNP
rs1028117359 731 dbSNP
rs536153174 734 dbSNP
rs965337990 740 dbSNP
rs767858767 750 dbSNP
rs1365016278 752 dbSNP
rs1172919820 763 dbSNP
rs569142270 772 dbSNP
rs531802413 785 dbSNP
rs1184689679 788 dbSNP
rs894420557 796 dbSNP
rs1441201188 797 dbSNP
rs1465529244 799 dbSNP
rs1008879816 815 dbSNP
rs1243016194 815 dbSNP
rs550455505 817 dbSNP
rs532370134 818 dbSNP
rs1266511354 820 dbSNP
rs1054666791 833 dbSNP
rs1223408198 839 dbSNP
rs60489647 841 dbSNP
rs1216572297 852 dbSNP
rs1351565972 860 dbSNP
rs1026391337 869 dbSNP
rs1196650209 874 dbSNP
rs762234458 876 dbSNP
rs994961606 876 dbSNP
rs899292172 883 dbSNP
rs191765226 884 dbSNP
rs948955661 886 dbSNP
rs1057512165 889 dbSNP
rs1420635053 889 dbSNP
rs1409029778 906 dbSNP
rs934319765 907 dbSNP
rs924321724 910 dbSNP
rs1357531162 913 dbSNP
rs1317275026 926 dbSNP
rs1433116524 926 dbSNP
rs1400928301 927 dbSNP
rs1386598733 929 dbSNP
rs1339578566 931 dbSNP
rs1160967062 935 dbSNP
rs1284959893 936 dbSNP
rs978444629 940 dbSNP
rs12644 949 dbSNP
rs1385195478 957 dbSNP
rs1184714650 967 dbSNP
rs1216041598 973 dbSNP
rs1042502132 978 dbSNP
rs1241219309 984 dbSNP
rs1488165485 992 dbSNP
rs921069831 998 dbSNP
rs1191871819 1000 dbSNP
rs975288930 1019 dbSNP
rs965609559 1021 dbSNP
rs868046426 1036 dbSNP
rs528224452 1047 dbSNP
rs1447802324 1049 dbSNP
rs1019512996 1056 dbSNP
rs188358334 1059 dbSNP
rs1304674791 1060 dbSNP
rs1345949762 1064 dbSNP
rs1358767859 1068 dbSNP
rs1435639877 1073 dbSNP
rs558976927 1076 dbSNP
rs775596679 1082 dbSNP
rs1223921303 1086 dbSNP
rs932886367 1092 dbSNP
rs994887342 1097 dbSNP
rs899260849 1099 dbSNP
rs534056456 1102 dbSNP
rs1269385943 1155 dbSNP
rs921543753 1165 dbSNP
rs974626033 1166 dbSNP
rs896006643 1170 dbSNP
rs1057377050 1171 dbSNP
rs999067621 1172 dbSNP
rs1471442303 1176 dbSNP
rs902824717 1177 dbSNP
rs1379785876 1180 dbSNP
rs566837153 1191 dbSNP
rs1423492738 1192 dbSNP
rs947116671 1197 dbSNP
rs1321503117 1199 dbSNP
rs1164837272 1225 dbSNP
rs1442856883 1230 dbSNP
rs1427103781 1232 dbSNP
rs1374066769 1233 dbSNP
rs962915099 1239 dbSNP
rs1312946230 1245 dbSNP
rs769994412 1247 dbSNP
rs1209544588 1254 dbSNP
rs1288179443 1259 dbSNP
rs1440009235 1260 dbSNP
rs982489151 1261 dbSNP
rs1417908166 1269 dbSNP
rs971160956 1272 dbSNP
rs1437964021 1274 dbSNP
rs943875591 1283 dbSNP
rs1023907376 1288 dbSNP
rs1472594622 1289 dbSNP
rs1012548863 1290 dbSNP
rs542650368 1293 dbSNP
rs770277408 1300 dbSNP
rs1196998427 1303 dbSNP
rs1397483489 1320 dbSNP
rs1454178590 1334 dbSNP
rs1315140557 1339 dbSNP
rs755024490 1350 dbSNP
rs143737425 1360 dbSNP
rs1242183716 1363 dbSNP
rs1282744425 1364 dbSNP
rs148852288 1381 dbSNP
rs1224728991 1384 dbSNP
rs1339992767 1393 dbSNP
rs564008262 1402 dbSNP
rs1456500733 1416 dbSNP
rs1205568738 1419 dbSNP
rs1256969744 1427 dbSNP
rs1423416195 1428 dbSNP
rs751510826 1431 dbSNP
rs1185730446 1433 dbSNP
rs1272147468 1434 dbSNP
rs766094259 1434 dbSNP
rs1374559498 1444 dbSNP
rs1214980771 1447 dbSNP
rs982656735 1465 dbSNP
rs1032930046 1469 dbSNP
rs1272765252 1474 dbSNP
rs1000400684 1477 dbSNP
rs919229608 1484 dbSNP
rs903006687 1492 dbSNP
rs1304433883 1497 dbSNP
rs1393896769 1506 dbSNP
rs1319938748 1510 dbSNP
rs963738624 1521 dbSNP
rs746028574 1523 dbSNP
rs138763068 1529 dbSNP
rs781621148 1530 dbSNP
rs945423053 1537 dbSNP
rs1225914705 1541 dbSNP
rs1410918052 1542 dbSNP
rs891246779 1550 dbSNP
rs1198931026 1551 dbSNP
rs577829990 1553 dbSNP
rs1192591132 1554 dbSNP
rs932688740 1559 dbSNP
rs553184463 1570 dbSNP
rs1174635690 1573 dbSNP
rs1480236752 1576 dbSNP
rs1269802278 1586 dbSNP
rs1035830273 1589 dbSNP
rs1201715550 1594 dbSNP
rs541103892 1601 dbSNP
rs1232276397 1602 dbSNP
rs781708948 1602 dbSNP
rs903465541 1602 dbSNP
rs1205105206 1605 dbSNP
rs1385148781 1606 dbSNP
rs1399027251 1607 dbSNP
rs1297921188 1610 dbSNP
rs1338946064 1612 dbSNP
rs1376322684 1615 dbSNP
rs1407265435 1616 dbSNP
rs1043311620 1622 dbSNP
rs1011182899 1646 dbSNP
rs974361218 1662 dbSNP
rs554700321 1664 dbSNP
rs1276234636 1675 dbSNP
rs1222600404 1678 dbSNP
rs113779478 1682 dbSNP
rs1284749948 1685 dbSNP
rs943788291 1686 dbSNP
rs1216198706 1695 dbSNP
rs183647183 1705 dbSNP
rs537457428 1708 dbSNP
rs1024026723 1709 dbSNP
rs1431377087 1712 dbSNP
rs991522741 1715 dbSNP
rs564404255 1723 dbSNP
rs958405866 1725 dbSNP
rs1156504156 1731 dbSNP
rs191440423 1732 dbSNP
rs991557534 1736 dbSNP
rs144554170 1738 dbSNP
rs1033123447 1742 dbSNP
rs1035799022 1743 dbSNP
rs753723728 1754 dbSNP
rs967547056 1760 dbSNP
rs1377792366 1772 dbSNP
rs1239663797 1774 dbSNP
rs903119939 1780 dbSNP
rs1284218496 1783 dbSNP
rs1021823417 1790 dbSNP
rs1221950411 1795 dbSNP
rs111877372 1797 dbSNP
rs76347821 1798 dbSNP
rs1197516273 1799 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545213. RNA binding protein: AGO2. Condition:Control ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
CLIP-seq Support 1 for dataset GSM545213
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / Control
Location of target site ENST00000360663.5 | 3UTR | AGGGGCUUGGGGCAAUUUCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
82 hsa-miR-6509-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT055374 PDCD4 programmed cell death 4 2 4
MIRT378341 MARCKS myristoylated alanine rich protein kinase C substrate 2 2
MIRT444668 CDKL2 cyclin dependent kinase like 2 2 2
MIRT446953 CD248 CD248 molecule 2 2
MIRT460332 CAMK4 calcium/calmodulin dependent protein kinase IV 2 6
MIRT464078 VPS4A vacuolar protein sorting 4 homolog A 2 2
MIRT464586 UBN2 ubinuclein 2 2 2
MIRT468482 SESN3 sestrin 3 2 2
MIRT468962 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT475455 HSPA8 heat shock protein family A (Hsp70) member 8 2 2
MIRT482403 ADRB1 adrenoceptor beta 1 2 10
MIRT486992 ZFAND2B zinc finger AN1-type containing 2B 2 2
MIRT489397 TUBB2A tubulin beta 2A class IIa 2 2
MIRT526319 UGT2A1 UDP glucuronosyltransferase family 2 member A1 complex locus 2 2
MIRT526560 UGT2A2 UDP glucuronosyltransferase family 2 member A2 2 2
MIRT526732 ZNF138 zinc finger protein 138 2 8
MIRT531581 STXBP5L syntaxin binding protein 5 like 2 2
MIRT532011 NOX5 NADPH oxidase 5 2 2
MIRT533407 TXLNG taxilin gamma 2 2
MIRT533436 TRPC5 transient receptor potential cation channel subfamily C member 5 2 2
MIRT533866 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 2
MIRT539254 ANKRD50 ankyrin repeat domain 50 2 2
MIRT541451 C15orf48 chromosome 15 open reading frame 48 2 2
MIRT566794 MIER3 MIER family member 3 2 2
MIRT569294 SURF6 surfeit 6 2 2
MIRT571336 RABGEF1 RAB guanine nucleotide exchange factor 1 2 2
MIRT572802 PPP3CB protein phosphatase 3 catalytic subunit beta 2 2
MIRT572813 MYO1C myosin IC 2 2
MIRT574219 DMRT2 doublesex and mab-3 related transcription factor 2 2 2
MIRT607259 GRAMD1B GRAM domain containing 1B 2 4
MIRT609307 CHD4 chromodomain helicase DNA binding protein 4 2 2
MIRT615459 REPS1 RALBP1 associated Eps domain containing 1 2 2
MIRT616861 RPLP1 ribosomal protein lateral stalk subunit P1 2 2
MIRT619415 NOS1AP nitric oxide synthase 1 adaptor protein 2 2
MIRT619652 COX19 COX19, cytochrome c oxidase assembly factor 2 2
MIRT625325 TNFRSF13B TNF receptor superfamily member 13B 2 2
MIRT638980 ARFIP2 ADP ribosylation factor interacting protein 2 2 2
MIRT639458 ZNF429 zinc finger protein 429 2 2
MIRT640550 SMCR8 Smith-Magenis syndrome chromosome region, candidate 8 2 2
MIRT641473 B4GALNT3 beta-1,4-N-acetyl-galactosaminyltransferase 3 2 2
MIRT642720 ATXN3 ataxin 3 2 2
MIRT643048 SMN1 survival of motor neuron 1, telomeric 2 2
MIRT644921 SMN2 survival of motor neuron 2, centromeric 2 2
MIRT645875 ZNF275 zinc finger protein 275 2 2
MIRT649824 LIPG lipase G, endothelial type 2 2
MIRT649851 GYS2 glycogen synthase 2 2 2
MIRT649972 TRAFD1 TRAF-type zinc finger domain containing 1 2 2
MIRT650675 ZNF259 ZPR1 zinc finger 1 1
MIRT651319 ZCCHC2 zinc finger CCHC-type containing 2 2 2
MIRT652876 TAB1 TGF-beta activated kinase 1 (MAP3K7) binding protein 1 2 2
MIRT652881 SYVN1 synoviolin 1 2 2
MIRT654144 RPAP2 RNA polymerase II associated protein 2 2 2
MIRT657080 JMY junction mediating and regulatory protein, p53 cofactor 2 2
MIRT657181 INO80C INO80 complex subunit C 2 2
MIRT657830 GJD3 gap junction protein delta 3 2 2
MIRT657897 GDF7 growth differentiation factor 7 2 2
MIRT659631 CDKN2AIP CDKN2A interacting protein 2 2
MIRT663115 SPTA1 spectrin alpha, erythrocytic 1 2 2
MIRT664739 METTL16 methyltransferase like 16 2 2
MIRT667551 LRAT lecithin retinol acyltransferase 2 2
MIRT668552 ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit 2 2
MIRT682893 XIAP X-linked inhibitor of apoptosis 2 2
MIRT683092 PRRG4 proline rich and Gla domain 4 2 2
MIRT683102 TIMM10B translocase of inner mitochondrial membrane 10B 2 2
MIRT697648 WNK1 WNK lysine deficient protein kinase 1 2 2
MIRT709158 ZNF419 zinc finger protein 419 2 2
MIRT713220 RCAN2 regulator of calcineurin 2 2 2
MIRT713277 LAIR1 leukocyte associated immunoglobulin like receptor 1 2 2
MIRT715008 CYP1B1 cytochrome P450 family 1 subfamily B member 1 2 2
MIRT715051 SYNJ2BP synaptojanin 2 binding protein 2 2
MIRT715696 PNMAL2 paraneoplastic Ma antigen family member 8B 2 2
MIRT717250 TMEM246 transmembrane protein 246 2 2
MIRT717322 PGK1 phosphoglycerate kinase 1 2 2
MIRT717587 MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like 2 2
MIRT718122 CHST4 carbohydrate sulfotransferase 4 2 2
MIRT718418 CALN1 calneuron 1 2 2
MIRT718750 ZNF490 zinc finger protein 490 2 2
MIRT720048 PPP1R3F protein phosphatase 1 regulatory subunit 3F 2 2
MIRT721497 THRB thyroid hormone receptor beta 2 2
MIRT722531 EPRS glutamyl-prolyl-tRNA synthetase 2 2
MIRT723279 KRTAP21-2 keratin associated protein 21-2 2 2
MIRT724813 MSX2 msh homeobox 2 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-6509-3p Temozolomide 5394 NSC362856 approved sensitive cell line (U251)
hsa-miR-6509-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-6509-3p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-6509-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-6509-3p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)

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