pre-miRNA Information
pre-miRNA hsa-mir-4708   
Genomic Coordinates chr14: 65335117 - 65335183
Description Homo sapiens miR-4708 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4708-5p
Sequence 9| AGAGAUGCCGCCUUGCUCCUU |29
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1017378847 9 dbSNP
rs750825813 10 dbSNP
rs1297395738 19 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol SLC30A9   
Synonyms BILAPES, C4orf1, GAC63, HUEL, ZNT9
Description solute carrier family 30 member 9
Transcript NM_006345   
Expression
Putative miRNA Targets on SLC30A9
3'UTR of SLC30A9
(miRNA target sites are highlighted)
>SLC30A9|NM_006345|3'UTR
   1 GTTTGATGGAATGAATCACCTGGGTGGGGACCTTGGAAACAAGTTTGTCCGTCCACTCTACAAAGTTTCCTCCTCTCCTA
  81 CACTGAAAGACTCAGTGCCATGCAGAAGCCTTTTTTTTAAGATGAAGGAAATATTTTATGTAAAGAGCAACTCAGCAGGA
 161 CACAGAACTAAAACTACTACTTACATCTAACAGACACACTACAAGTTGAATCAATTTGAAAATCATGTTTTTATGCTTCC
 241 ATAGGGAACATTTTGGTTATTTAAATTGTTCATAATGTCCCATATTTCACCTGTTCAGTGTATACTGTACTTTGCAATCA
 321 TCTTTCCTTTTTTCACATTGGTAAAAATAAGTGGCATCCATAGGATCATGATTTTTAATTTGTTGCCTCTGAAGATTTCA
 401 CTCCATCAAGATCTGCCAATCTTCAATATTCTGGCTAAATCTTGGTATGTGGTTTTTAAACAGTCACTCCGTTTCAAAGT
 481 CTGTCTTTCCTTATAGAATGTGGAAATTATTTCTCCATACCTTGTGATTTTGACCTGAGTGCTAAGAGAATCACTCTCCT
 561 TACCTAGTTATCTACAAATGTTCATTCCAGAAATGTTTAGTTACTGAATTGAATGAAGACATCTCAGTACACTCTTTTAG
 641 GTCATAGTAGTTGCCATTTTGTAAAATTTCTTTTTTCTTCTTTGCTTTTTTCCCCTTATTTGGTTTAATTTTTCTAATGT
 721 TAGGAGATATAGTCCTAGATATTTCCATGGGCCAGTGTGATGACTTTTTTTTAAATGAGGTTCAGTACCATAATGTTTAT
 801 TTACTGGAAGATAATGCATTTATAAGCATTTTAAAATTCTGTAAAGTGGGTTAGAAATATTTATAATTTTACAGGCAGGA
 881 CAGCATTTGACTTTTATTTAAAAGGCGGCACTACTTATGTAAATCTGAGCTGTGGGATATTTCTTGCTTTAAGAGAGAGA
 961 CAGAATCTCTCACTGAAACTCATGGTCATGATTTTGTATAATATAGTTCATACTGTGTCTGTGAGTTTCTTCAGTTACAA
1041 ATGGGCATTTAGTATAGTTATATTGACTATAACATGTAAGTAAATAGCTTTCTACTGACCCTAAGTTATCAAGGTGGAAA
1121 AAAAACATGCAATTCAGTAATTGAAAATGTGGTGAAAAGCTGCAGCTGTCATCATCAAAACAACTCATAACATACTTTAA
1201 AATGTTCAGGTAGCAGTGAGCATTGTTCATATGAGAATGGCGGCTGGGTGATCTCTTTGCTGAATTAATGAGTTCTTAAC
1281 ATGTGGACCCAACTGCCTGTGTGAGATCTGTGTCTTAAAACTTACTGGAATGGAAATCTATGAATTATTGCAAATTGTAA
1361 TGCTGGAAACAAAAAATAAATCCTTGGTTAAAGGGTTTGTAATGGTGAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' uucCUCGUUCCGCCGUAGAGa 5'
             ||| :|| | | ||||| 
Target 5' taaGAGAGAGACAGAATCTCt 3'
950 - 970 130.00 -10.50
2
miRNA  3' uuccUCGUUCCGCCGUAGAga 5'
              :|||:| | ||||:|  
Target 5' tacaGGCAGGACAGCATTTga 3'
870 - 890 125.00 -9.90
3
miRNA  3' uuccucguuccgccGUAGAGa 5'
                        |||||| 
Target 5' gaattgaatgaagaCATCTCa 3'
606 - 626 120.00 -6.80
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30105471 2 COSMIC
COSN31483289 6 COSMIC
COSN31506956 10 COSMIC
COSN26995208 24 COSMIC
COSN26995216 27 COSMIC
COSN30450085 27 COSMIC
COSN26995205 36 COSMIC
COSN30574091 53 COSMIC
COSN26995207 54 COSMIC
COSN30114116 68 COSMIC
COSN30164268 76 COSMIC
COSN510723 112 COSMIC
COSN30172721 113 COSMIC
COSN20080903 119 COSMIC
COSN30548717 119 COSMIC
COSN31525955 130 COSMIC
COSN31526151 166 COSMIC
COSN30543959 184 COSMIC
COSN31598107 185 COSMIC
COSN30161222 231 COSMIC
COSN15927689 274 COSMIC
COSN31517292 497 COSMIC
COSN8490761 717 COSMIC
COSN31962261 974 COSMIC
COSN31959911 1093 COSMIC
COSN27193107 1608 COSMIC
COSN26208338 1828 COSMIC
COSN27456452 1905 COSMIC
COSN27521666 1907 COSMIC
COSN2028701 2262 COSMIC
COSN27608244 2491 COSMIC
COSN2028702 2959 COSMIC
COSN2028703 3198 COSMIC
COSN32001455 3962 COSMIC
COSN6830938 4015 COSMIC
COSN22513807 4020 COSMIC
COSN15185095 4090 COSMIC
COSN5571034 4237 COSMIC
COSN25101998 4316 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs370749868 9 dbSNP
rs752865478 15 dbSNP
rs758706849 21 dbSNP
rs777773467 22 dbSNP
rs949340290 25 dbSNP
rs375661646 30 dbSNP
rs747133490 32 dbSNP
rs1276279082 38 dbSNP
rs923612774 42 dbSNP
rs1323414896 45 dbSNP
rs1223951928 49 dbSNP
rs1266117059 50 dbSNP
rs560458244 51 dbSNP
rs754416635 52 dbSNP
rs1230848828 72 dbSNP
rs755351748 76 dbSNP
rs1424418597 83 dbSNP
rs1223288576 94 dbSNP
rs1490382343 98 dbSNP
rs1290392936 102 dbSNP
rs1159845527 110 dbSNP
rs1355788063 111 dbSNP
rs972649337 111 dbSNP
rs1363021840 117 dbSNP
rs1418339937 123 dbSNP
rs1317763406 128 dbSNP
rs935048640 135 dbSNP
rs1370878727 138 dbSNP
rs569661491 143 dbSNP
rs1278038542 166 dbSNP
rs893303555 174 dbSNP
rs1346292021 177 dbSNP
rs1302641080 179 dbSNP
rs1450527067 180 dbSNP
rs1282609886 181 dbSNP
rs1026002356 185 dbSNP
rs1381847968 188 dbSNP
rs765441916 194 dbSNP
rs1398533702 195 dbSNP
rs1406201885 209 dbSNP
rs1287817887 213 dbSNP
rs533271903 219 dbSNP
rs1480553114 239 dbSNP
rs1011773407 270 dbSNP
rs1351424709 273 dbSNP
rs991834190 276 dbSNP
rs148230631 281 dbSNP
rs1443618476 297 dbSNP
rs1214945153 306 dbSNP
rs536668723 314 dbSNP
rs1280452829 328 dbSNP
rs1008916561 332 dbSNP
rs1019575845 338 dbSNP
rs1207669856 365 dbSNP
rs1236522764 385 dbSNP
rs1439865567 388 dbSNP
rs1282842217 390 dbSNP
rs1403207747 394 dbSNP
rs897192380 396 dbSNP
rs1364151579 397 dbSNP
rs1290014634 398 dbSNP
rs994248083 400 dbSNP
rs1430640018 402 dbSNP
rs1343861048 406 dbSNP
rs1179660129 410 dbSNP
rs555208490 412 dbSNP
rs952510739 413 dbSNP
rs926112986 419 dbSNP
rs113626804 420 dbSNP
rs1429815334 425 dbSNP
rs748572000 427 dbSNP
rs1023906256 430 dbSNP
rs1185913898 442 dbSNP
rs773106710 446 dbSNP
rs1158478857 448 dbSNP
rs970630974 450 dbSNP
rs1204099476 451 dbSNP
rs1460670677 453 dbSNP
rs936184249 462 dbSNP
rs1049782970 468 dbSNP
rs758629292 468 dbSNP
rs913481655 471 dbSNP
rs934295319 472 dbSNP
rs1296371138 474 dbSNP
rs1051044403 477 dbSNP
rs777920718 483 dbSNP
rs1801960 486 dbSNP
rs747042005 490 dbSNP
rs982446922 492 dbSNP
rs1416234012 493 dbSNP
rs1038431378 495 dbSNP
rs1405768138 496 dbSNP
rs923602883 505 dbSNP
rs576038241 506 dbSNP
rs1405639048 507 dbSNP
rs1447706426 510 dbSNP
rs1311222135 519 dbSNP
rs770926320 536 dbSNP
rs915022798 545 dbSNP
rs181839119 557 dbSNP
rs1184110729 569 dbSNP
rs546912931 574 dbSNP
rs1238303723 585 dbSNP
rs1275339086 590 dbSNP
rs1481749981 598 dbSNP
rs1346582321 599 dbSNP
rs760498184 610 dbSNP
rs566854200 615 dbSNP
rs1317823233 624 dbSNP
rs1013550721 633 dbSNP
rs535760047 635 dbSNP
rs1198246632 641 dbSNP
rs1261897608 642 dbSNP
rs1023300146 646 dbSNP
rs1393430358 649 dbSNP
rs1457959296 662 dbSNP
rs1200089305 671 dbSNP
rs1049900406 682 dbSNP
rs1396801691 686 dbSNP
rs889956865 686 dbSNP
rs141256371 692 dbSNP
rs1456697227 696 dbSNP
rs1181799471 699 dbSNP
rs1041357912 703 dbSNP
rs897138577 704 dbSNP
rs1460072453 707 dbSNP
rs1164213572 717 dbSNP
rs569157041 717 dbSNP
rs530086351 719 dbSNP
rs373474095 720 dbSNP
rs186897412 731 dbSNP
rs888509811 734 dbSNP
rs150337168 738 dbSNP
rs989372059 739 dbSNP
rs192128028 747 dbSNP
rs913424524 751 dbSNP
rs1428633842 754 dbSNP
rs1012747086 757 dbSNP
rs1333592239 765 dbSNP
rs1294025127 768 dbSNP
rs182211204 773 dbSNP
rs1359351151 778 dbSNP
rs1264159313 781 dbSNP
rs971002537 786 dbSNP
rs1241650966 811 dbSNP
rs982049031 812 dbSNP
rs73812718 815 dbSNP
rs1389321064 816 dbSNP
rs74621221 818 dbSNP
rs1346914943 820 dbSNP
rs769776932 831 dbSNP
rs1303244807 840 dbSNP
rs1423383111 856 dbSNP
rs1363673035 864 dbSNP
rs1323901539 880 dbSNP
rs1363005261 882 dbSNP
rs942705342 883 dbSNP
rs1471738753 892 dbSNP
rs956362042 907 dbSNP
rs542554559 908 dbSNP
rs1282120362 909 dbSNP
rs1490192287 910 dbSNP
rs1207381674 919 dbSNP
rs1317975011 919 dbSNP
rs1220137068 921 dbSNP
rs1260497663 928 dbSNP
rs1226882376 929 dbSNP
rs1325251292 936 dbSNP
rs1255758787 939 dbSNP
rs1283483458 952 dbSNP
rs1403825259 952 dbSNP
rs898585433 960 dbSNP
rs1337918614 962 dbSNP
rs1382697506 964 dbSNP
rs1195599145 966 dbSNP
rs1268408740 967 dbSNP
rs914929217 988 dbSNP
rs1384084869 989 dbSNP
rs994290139 1001 dbSNP
rs1047315918 1003 dbSNP
rs775256442 1004 dbSNP
rs1453864132 1005 dbSNP
rs1177388546 1007 dbSNP
rs1480175467 1009 dbSNP
rs1197830778 1015 dbSNP
rs1268329108 1016 dbSNP
rs931713053 1018 dbSNP
rs1196033985 1020 dbSNP
rs1448099865 1025 dbSNP
rs11051 1035 dbSNP
rs1207260247 1039 dbSNP
rs1462897280 1042 dbSNP
rs1173176795 1045 dbSNP
rs1013477076 1058 dbSNP
rs1023561712 1062 dbSNP
rs1461612642 1064 dbSNP
rs911390402 1068 dbSNP
rs1271443792 1074 dbSNP
rs969020220 1078 dbSNP
rs1392558542 1090 dbSNP
rs1000547171 1098 dbSNP
rs944224849 1100 dbSNP
rs1318401872 1101 dbSNP
rs1454419724 1102 dbSNP
rs1406506950 1105 dbSNP
rs1385059644 1109 dbSNP
rs1302440831 1115 dbSNP
rs1337719119 1118 dbSNP
rs575907725 1118 dbSNP
rs1032036067 1126 dbSNP
rs1400266896 1126 dbSNP
rs1169733228 1127 dbSNP
rs956640960 1131 dbSNP
rs779240635 1136 dbSNP
rs987947069 1136 dbSNP
rs1446890800 1149 dbSNP
rs955545250 1153 dbSNP
rs986973087 1155 dbSNP
rs540330501 1171 dbSNP
rs1440339029 1175 dbSNP
rs1274625934 1182 dbSNP
rs1195894812 1186 dbSNP
rs911491576 1199 dbSNP
rs1295365184 1202 dbSNP
rs1306562803 1210 dbSNP
rs1245012364 1214 dbSNP
rs1041302795 1216 dbSNP
rs942674132 1218 dbSNP
rs768288887 1221 dbSNP
rs919959440 1223 dbSNP
rs930046369 1223 dbSNP
rs1338960946 1230 dbSNP
rs1331082887 1234 dbSNP
rs1047152956 1240 dbSNP
rs930230301 1242 dbSNP
rs1048385866 1243 dbSNP
rs1386326387 1244 dbSNP
rs1358881456 1247 dbSNP
rs888452379 1249 dbSNP
rs927394947 1250 dbSNP
rs1234302143 1251 dbSNP
rs1220953347 1253 dbSNP
rs1044975097 1255 dbSNP
rs1436790543 1256 dbSNP
rs1271845101 1258 dbSNP
rs1291685273 1273 dbSNP
rs1801959 1276 dbSNP
rs1045597914 1282 dbSNP
rs1290901475 1290 dbSNP
rs527950260 1302 dbSNP
rs1375231709 1341 dbSNP
rs1281533592 1349 dbSNP
rs1003360901 1353 dbSNP
rs544720654 1356 dbSNP
rs1306261988 1360 dbSNP
rs1188483599 1367 dbSNP
rs1406799928 1374 dbSNP
rs185352786 1400 dbSNP
rs1422514072 1422 dbSNP
rs1164663288 1437 dbSNP
rs1403992088 1444 dbSNP
rs1203566772 1449 dbSNP
rs1010782247 1455 dbSNP
rs1021884478 1456 dbSNP
rs953200463 1463 dbSNP
rs1421365168 1464 dbSNP
rs11362414 1470 dbSNP
rs1316458494 1470 dbSNP
rs1472069056 1470 dbSNP
rs199749325 1470 dbSNP
rs67969801 1470 dbSNP
rs869112254 1470 dbSNP
rs1295841616 1471 dbSNP
rs1284705391 1473 dbSNP
rs1360600305 1474 dbSNP
rs1396297276 1476 dbSNP
rs527365570 1479 dbSNP
rs911657776 1482 dbSNP
rs1293524313 1484 dbSNP
rs1434929828 1484 dbSNP
rs546827039 1484 dbSNP
rs1342704767 1485 dbSNP
rs1244219707 1486 dbSNP
rs1032420887 1488 dbSNP
rs965833598 1489 dbSNP
rs1355086232 1490 dbSNP
rs1465161433 1496 dbSNP
rs1219368503 1498 dbSNP
rs976894378 1505 dbSNP
rs1178120346 1507 dbSNP
rs1480502940 1532 dbSNP
rs1259091649 1533 dbSNP
rs1485568252 1537 dbSNP
rs918760338 1552 dbSNP
rs892165456 1556 dbSNP
rs930177955 1559 dbSNP
rs1030083390 1560 dbSNP
rs1463359461 1561 dbSNP
rs567944955 1562 dbSNP
rs771084850 1562 dbSNP
rs189713720 1570 dbSNP
rs1048710326 1572 dbSNP
rs1300696052 1576 dbSNP
rs1258520604 1582 dbSNP
rs1217481919 1585 dbSNP
rs909881581 1589 dbSNP
rs1271236179 1594 dbSNP
rs986941506 1595 dbSNP
rs1018424848 1596 dbSNP
rs1469985996 1602 dbSNP
rs948074997 1606 dbSNP
rs1045142487 1608 dbSNP
rs964243694 1615 dbSNP
rs906583452 1617 dbSNP
rs974388788 1622 dbSNP
rs1187815082 1624 dbSNP
rs919889431 1624 dbSNP
rs1003603321 1632 dbSNP
rs1204000897 1633 dbSNP
rs1447503876 1633 dbSNP
rs1483705066 1633 dbSNP
rs929997832 1633 dbSNP
rs1052183131 1636 dbSNP
rs200656216 1642 dbSNP
rs1156810159 1645 dbSNP
rs983251024 1645 dbSNP
rs918020907 1650 dbSNP
rs949478435 1651 dbSNP
rs1363543542 1654 dbSNP
rs1317613835 1656 dbSNP
rs1378014128 1665 dbSNP
rs1453780148 1665 dbSNP
rs1344129853 1672 dbSNP
rs1466100115 1675 dbSNP
rs1304285735 1678 dbSNP
rs1399614362 1679 dbSNP
rs559858757 1688 dbSNP
rs1010773924 1690 dbSNP
rs1314821724 1697 dbSNP
rs1022654754 1702 dbSNP
rs1386944613 1715 dbSNP
rs936577646 1722 dbSNP
rs549367938 1724 dbSNP
rs953060275 1725 dbSNP
rs1180307618 1728 dbSNP
rs1378082606 1743 dbSNP
rs1252613815 1748 dbSNP
rs115292180 1753 dbSNP
rs1340697861 1769 dbSNP
rs1294522075 1772 dbSNP
rs537820435 1786 dbSNP
rs965745908 1789 dbSNP
rs1310220054 1794 dbSNP
rs551775878 1795 dbSNP
rs971815078 1796 dbSNP
rs75157242 1800 dbSNP
rs1306875847 1808 dbSNP
rs1009251875 1809 dbSNP
rs201105281 1809 dbSNP
rs377600650 1813 dbSNP
rs1457256817 1815 dbSNP
rs1007285211 1817 dbSNP
rs767165912 1825 dbSNP
rs1421124529 1826 dbSNP
rs984353592 1834 dbSNP
rs1181576481 1836 dbSNP
rs1482100272 1842 dbSNP
rs1257762002 1849 dbSNP
rs534277471 1859 dbSNP
rs1271726962 1862 dbSNP
rs1460173275 1864 dbSNP
rs74531494 1865 dbSNP
rs11362415 1866 dbSNP
rs1264062007 1866 dbSNP
rs1329472450 1866 dbSNP
rs1488392245 1866 dbSNP
rs76752698 1866 dbSNP
rs796775433 1866 dbSNP
rs1203213164 1867 dbSNP
rs79234119 1868 dbSNP
rs1287271209 1871 dbSNP
rs1018393496 1878 dbSNP
rs1346814714 1878 dbSNP
rs1458902090 1880 dbSNP
rs1175477061 1881 dbSNP
rs1407144739 1882 dbSNP
rs1433643447 1883 dbSNP
rs1177643475 1886 dbSNP
rs1426530063 1888 dbSNP
rs964190304 1890 dbSNP
rs1290419971 1891 dbSNP
rs1413036319 1891 dbSNP
rs1468182121 1891 dbSNP
rs974693284 1892 dbSNP
rs1471687990 1894 dbSNP
rs554054927 1899 dbSNP
rs1027258609 1904 dbSNP
rs4861160 1905 dbSNP
rs951430741 1905 dbSNP
rs1207284810 1908 dbSNP
rs1465612547 1911 dbSNP
rs1267147584 1913 dbSNP
rs1206437859 1923 dbSNP
rs1325144024 1948 dbSNP
rs910155083 1949 dbSNP
rs1231807247 1975 dbSNP
rs752767632 1991 dbSNP
rs1297605818 1996 dbSNP
rs970799935 2000 dbSNP
rs980886362 2009 dbSNP
rs1296757544 2014 dbSNP
rs1373248405 2018 dbSNP
rs1455855510 2029 dbSNP
rs1387813045 2034 dbSNP
rs1173264344 2036 dbSNP
rs1477712559 2039 dbSNP
rs926410066 2045 dbSNP
rs1195917040 2051 dbSNP
rs1450555740 2052 dbSNP
rs1321468492 2054 dbSNP
rs557002439 2055 dbSNP
rs1462382350 2059 dbSNP
rs1054087933 2061 dbSNP
rs913831845 2063 dbSNP
rs114687483 2069 dbSNP
rs1253072876 2070 dbSNP
rs1202199381 2087 dbSNP
rs1051358536 2095 dbSNP
rs1364297324 2099 dbSNP
rs1295132824 2106 dbSNP
rs534465056 2108 dbSNP
rs890156842 2110 dbSNP
rs1488779766 2115 dbSNP
rs1342508686 2119 dbSNP
rs769332486 2121 dbSNP
rs1414018640 2124 dbSNP
rs201376811 2127 dbSNP
rs61057407 2127 dbSNP
rs899978012 2128 dbSNP
rs1266203372 2135 dbSNP
rs1390033293 2138 dbSNP
rs556149985 2150 dbSNP
rs1479823275 2153 dbSNP
rs1167139824 2155 dbSNP
rs939407116 2162 dbSNP
rs1237730131 2168 dbSNP
rs1186393736 2178 dbSNP
rs1440252068 2182 dbSNP
rs1252064311 2183 dbSNP
rs576010914 2184 dbSNP
rs374154457 2185 dbSNP
rs1052507601 2186 dbSNP
rs892279723 2203 dbSNP
rs1027597119 2209 dbSNP
rs1247962865 2221 dbSNP
rs946578355 2227 dbSNP
rs1356749573 2236 dbSNP
rs1285077179 2239 dbSNP
rs558115864 2240 dbSNP
rs11935648 2241 dbSNP
rs888029532 2243 dbSNP
rs1458912230 2246 dbSNP
rs1305460171 2249 dbSNP
rs1343793514 2254 dbSNP
rs889006114 2255 dbSNP
rs1407498533 2256 dbSNP
rs970724871 2257 dbSNP
rs980812271 2257 dbSNP
rs926711501 2258 dbSNP
rs1007478575 2262 dbSNP
rs1018991496 2264 dbSNP
rs901542951 2271 dbSNP
rs182764334 2272 dbSNP
rs138032037 2274 dbSNP
rs1452026692 2279 dbSNP
rs945307933 2282 dbSNP
rs1226335806 2292 dbSNP
rs1289484851 2311 dbSNP
rs1490148480 2315 dbSNP
rs114904131 2316 dbSNP
rs1264652514 2328 dbSNP
rs1474237649 2347 dbSNP
rs187287329 2348 dbSNP
rs758691145 2353 dbSNP
rs984667296 2354 dbSNP
rs1306780660 2380 dbSNP
rs1400524085 2384 dbSNP
rs1439232475 2397 dbSNP
rs1350905981 2400 dbSNP
rs1017122611 2401 dbSNP
rs970005905 2406 dbSNP
rs1403905324 2407 dbSNP
rs563064911 2414 dbSNP
rs1166082910 2417 dbSNP
rs1364266750 2421 dbSNP
rs981056935 2422 dbSNP
rs116032781 2424 dbSNP
rs757707117 2427 dbSNP
rs1409114766 2428 dbSNP
rs1192372161 2431 dbSNP
rs777991233 2436 dbSNP
rs1246018349 2437 dbSNP
rs56060472 2447 dbSNP
rs1428933169 2448 dbSNP
rs1270322771 2454 dbSNP
rs1209576567 2456 dbSNP
rs1328678218 2463 dbSNP
rs913958610 2470 dbSNP
rs1220976544 2472 dbSNP
rs78387281 2475 dbSNP
rs1274754528 2476 dbSNP
rs375626580 2484 dbSNP
rs191368797 2486 dbSNP
rs552797483 2487 dbSNP
rs368586448 2489 dbSNP
rs943273404 2490 dbSNP
rs895837477 2491 dbSNP
rs1385905019 2492 dbSNP
rs146036059 2494 dbSNP
rs1217193553 2496 dbSNP
rs139502214 2498 dbSNP
rs1189390730 2499 dbSNP
rs1451157903 2505 dbSNP
rs1248423331 2510 dbSNP
rs1187617418 2523 dbSNP
rs970693652 2524 dbSNP
rs35054626 2526 dbSNP
rs993191904 2532 dbSNP
rs1444751176 2549 dbSNP
rs781633380 2557 dbSNP
rs1025999874 2566 dbSNP
rs1212395757 2577 dbSNP
rs536032428 2588 dbSNP
rs370282936 2592 dbSNP
rs1278619431 2594 dbSNP
rs751763427 2596 dbSNP
rs750808462 2597 dbSNP
rs1017487652 2603 dbSNP
rs1434776479 2610 dbSNP
rs73151367 2614 dbSNP
rs1304204894 2619 dbSNP
rs1448178532 2624 dbSNP
rs116051535 2625 dbSNP
rs1358054473 2631 dbSNP
rs1035262695 2633 dbSNP
rs781231494 2634 dbSNP
rs988077006 2645 dbSNP
rs913906254 2648 dbSNP
rs1447409523 2649 dbSNP
rs778608940 2652 dbSNP
rs1159746763 2655 dbSNP
rs183591696 2656 dbSNP
rs1183812748 2657 dbSNP
rs1399007888 2664 dbSNP
rs1020776734 2666 dbSNP
rs1317654981 2670 dbSNP
rs1208736118 2672 dbSNP
rs1359967226 2673 dbSNP
rs1344979830 2676 dbSNP
rs368052354 2677 dbSNP
rs1454743192 2689 dbSNP
rs1340446104 2691 dbSNP
rs188639217 2693 dbSNP
rs1381746674 2700 dbSNP
rs910374361 2701 dbSNP
rs1300598309 2703 dbSNP
rs769719643 2719 dbSNP
rs987328301 2721 dbSNP
rs1427657850 2729 dbSNP
rs1369966082 2733 dbSNP
rs558130198 2735 dbSNP
rs375205578 2736 dbSNP
rs1413296782 2737 dbSNP
rs1185929858 2740 dbSNP
rs923155475 2749 dbSNP
rs571702118 2750 dbSNP
rs1347998940 2760 dbSNP
rs540764661 2764 dbSNP
rs1205074234 2766 dbSNP
rs1278630601 2767 dbSNP
rs1479909110 2769 dbSNP
rs911825357 2770 dbSNP
rs112156866 2772 dbSNP
rs574448340 2773 dbSNP
rs1047391300 2784 dbSNP
rs1201360695 2785 dbSNP
rs1241727046 2791 dbSNP
rs532909835 2794 dbSNP
rs1350563969 2798 dbSNP
rs887451807 2803 dbSNP
rs1006377462 2808 dbSNP
rs1407936126 2816 dbSNP
rs578029011 2818 dbSNP
rs920295431 2833 dbSNP
rs1468991746 2835 dbSNP
rs1158097675 2838 dbSNP
rs905344056 2846 dbSNP
rs930403533 2852 dbSNP
rs542869607 2853 dbSNP
rs1473654733 2858 dbSNP
rs1412807658 2859 dbSNP
rs1002345552 2867 dbSNP
rs1035167673 2868 dbSNP
rs1174513096 2874 dbSNP
rs1405172282 2893 dbSNP
rs1447232693 2900 dbSNP
rs1210196148 2901 dbSNP
rs1266945243 2902 dbSNP
rs71664392 2902 dbSNP
rs35028195 2903 dbSNP
rs201510765 2906 dbSNP
rs60118504 2907 dbSNP
rs74289122 2908 dbSNP
rs1333915149 2916 dbSNP
rs1441344287 2922 dbSNP
rs1274951643 2931 dbSNP
rs1301868751 2944 dbSNP
rs960904162 2948 dbSNP
rs1365225115 2949 dbSNP
rs867884198 2950 dbSNP
rs1324210944 2951 dbSNP
rs1009781118 2956 dbSNP
rs779971740 2957 dbSNP
rs1459021708 2961 dbSNP
rs1325032625 2970 dbSNP
rs1020903164 2974 dbSNP
rs577981029 2975 dbSNP
rs749055143 2990 dbSNP
rs940189637 2999 dbSNP
rs1433026979 3000 dbSNP
rs1251538046 3001 dbSNP
rs116332349 3009 dbSNP
rs1465094099 3011 dbSNP
rs768360899 3012 dbSNP
rs532048400 3015 dbSNP
rs1267046738 3017 dbSNP
rs1202905058 3018 dbSNP
rs1346470418 3022 dbSNP
rs576955099 3027 dbSNP
rs1036621835 3033 dbSNP
rs368644607 3039 dbSNP
rs1196748186 3045 dbSNP
rs979906047 3048 dbSNP
rs910667397 3063 dbSNP
rs1253048721 3065 dbSNP
rs965171143 3076 dbSNP
rs1436598617 3081 dbSNP
rs975890940 3084 dbSNP
rs1317864546 3087 dbSNP
rs1366256975 3087 dbSNP
rs1181690024 3091 dbSNP
rs923103244 3096 dbSNP
rs774013276 3104 dbSNP
rs12511999 3115 dbSNP
rs1481459403 3132 dbSNP
rs1173174753 3134 dbSNP
rs1465983341 3137 dbSNP
rs1393766226 3138 dbSNP
rs1170902887 3139 dbSNP
rs1450457276 3143 dbSNP
rs4861019 3154 dbSNP
rs772834964 3157 dbSNP
rs1256244168 3167 dbSNP
rs1021477949 3169 dbSNP
rs1484670292 3170 dbSNP
rs1466278659 3179 dbSNP
rs966490379 3189 dbSNP
rs1228936540 3196 dbSNP
rs527670428 3198 dbSNP
rs760323752 3207 dbSNP
rs545520194 3209 dbSNP
rs1018758993 3211 dbSNP
rs1044466025 3217 dbSNP
rs868463965 3233 dbSNP
rs1342428385 3235 dbSNP
rs905586879 3241 dbSNP
rs1003036799 3251 dbSNP
rs1056521782 3276 dbSNP
rs1334952266 3283 dbSNP
rs1166444928 3292 dbSNP
rs1389935668 3292 dbSNP
rs964597514 3292 dbSNP
rs974667314 3292 dbSNP
rs58663550 3294 dbSNP
rs1186281713 3297 dbSNP
rs193097495 3297 dbSNP
rs1253964622 3298 dbSNP
rs201718986 3298 dbSNP
rs1205781141 3299 dbSNP
rs114061972 3300 dbSNP
rs1211362865 3307 dbSNP
rs1249778332 3307 dbSNP
rs1021184872 3308 dbSNP
rs569783779 3309 dbSNP
rs1284969554 3321 dbSNP
rs983197850 3324 dbSNP
rs1402571219 3329 dbSNP
rs968440055 3330 dbSNP
rs1290819488 3333 dbSNP
rs1340774953 3336 dbSNP
rs907630562 3339 dbSNP
rs1327311437 3340 dbSNP
rs1000844067 3341 dbSNP
rs1391067988 3348 dbSNP
rs10938178 3349 dbSNP
rs552041331 3351 dbSNP
rs906737832 3356 dbSNP
rs1472237031 3367 dbSNP
rs938235041 3370 dbSNP
rs1200784886 3371 dbSNP
rs1451943786 3374 dbSNP
rs1055790981 3376 dbSNP
rs893765834 3377 dbSNP
rs1197370502 3380 dbSNP
rs1020986219 3388 dbSNP
rs149573875 3392 dbSNP
rs1252083594 3393 dbSNP
rs1479868397 3403 dbSNP
rs1008978323 3406 dbSNP
rs534340463 3408 dbSNP
rs1325573606 3412 dbSNP
rs950571676 3417 dbSNP
rs1371194321 3418 dbSNP
rs763324912 3422 dbSNP
rs554517703 3424 dbSNP
rs71608099 3430 dbSNP
rs1405761471 3432 dbSNP
rs1192834343 3433 dbSNP
rs574459486 3436 dbSNP
rs1245913710 3438 dbSNP
rs12512101 3441 dbSNP
rs941959198 3444 dbSNP
rs979750744 3446 dbSNP
rs1163564335 3451 dbSNP
rs556527189 3453 dbSNP
rs576700892 3454 dbSNP
rs938425231 3455 dbSNP
rs1346258871 3459 dbSNP
rs1302008968 3472 dbSNP
rs1056847645 3477 dbSNP
rs757410977 3484 dbSNP
rs983508647 3486 dbSNP
rs1366965986 3492 dbSNP
rs578134900 3493 dbSNP
rs896639792 3497 dbSNP
rs781463828 3510 dbSNP
rs1177518715 3512 dbSNP
rs545750526 3518 dbSNP
rs981221597 3519 dbSNP
rs1394347966 3526 dbSNP
rs1171555148 3527 dbSNP
rs928080802 3528 dbSNP
rs1042546555 3529 dbSNP
rs1173642585 3533 dbSNP
rs1383598090 3534 dbSNP
rs904081900 3535 dbSNP
rs1212273288 3543 dbSNP
rs775741752 3562 dbSNP
rs1280207163 3564 dbSNP
rs938161691 3567 dbSNP
rs1344739835 3574 dbSNP
rs1297961310 3577 dbSNP
rs35136358 3584 dbSNP
rs1001528536 3586 dbSNP
rs565556340 3587 dbSNP
rs1304097791 3593 dbSNP
rs1448069528 3594 dbSNP
rs750435841 3602 dbSNP
rs756200717 3603 dbSNP
rs1042781168 3614 dbSNP
rs1396483067 3617 dbSNP
rs1227173227 3618 dbSNP
rs184541506 3619 dbSNP
rs1169413356 3621 dbSNP
rs1428167750 3638 dbSNP
rs78109488 3644 dbSNP
rs1040438806 3647 dbSNP
rs950520519 3659 dbSNP
rs1257502230 3661 dbSNP
rs996425294 3662 dbSNP
rs983257248 3664 dbSNP
rs1220842282 3687 dbSNP
rs372122607 3690 dbSNP
rs1486232377 3691 dbSNP
rs117124572 3693 dbSNP
rs867273658 3697 dbSNP
rs980458676 3700 dbSNP
rs1290835370 3713 dbSNP
rs952036556 3713 dbSNP
rs1004840024 3714 dbSNP
rs1386805670 3721 dbSNP
rs749215722 3722 dbSNP
rs11946457 3730 dbSNP
rs762962444 3734 dbSNP
rs981146542 3740 dbSNP
rs552868700 3741 dbSNP
rs1167159948 3745 dbSNP
rs146678893 3745 dbSNP
rs543095073 3745 dbSNP
rs557059355 3746 dbSNP
rs1185820482 3747 dbSNP
rs1473869832 3748 dbSNP
rs1251816856 3756 dbSNP
rs571195558 3758 dbSNP
rs912954068 3761 dbSNP
rs945818326 3764 dbSNP
rs1266915292 3768 dbSNP
rs1213936872 3772 dbSNP
rs991380699 3776 dbSNP
rs1042521555 3777 dbSNP
rs915453254 3785 dbSNP
rs1229658044 3790 dbSNP
rs1351073493 3791 dbSNP
rs1396212616 3804 dbSNP
rs1337830071 3805 dbSNP
rs1389517977 3809 dbSNP
rs1369460924 3823 dbSNP
rs1293828738 3827 dbSNP
rs1441931808 3828 dbSNP
rs1385407792 3829 dbSNP
rs1393954814 3831 dbSNP
rs1244473648 3835 dbSNP
rs946952566 3841 dbSNP
rs1364925353 3845 dbSNP
rs904028905 3846 dbSNP
rs1159017068 3868 dbSNP
rs754981888 3870 dbSNP
rs1314948108 3872 dbSNP
rs1039733781 3875 dbSNP
rs1241278109 3876 dbSNP
rs900487880 3877 dbSNP
rs1467778586 3896 dbSNP
rs1210107855 3897 dbSNP
rs1250720790 3897 dbSNP
rs1350748699 3902 dbSNP
rs148731823 3907 dbSNP
rs1258995699 3917 dbSNP
rs1485676309 3922 dbSNP
rs563180857 3926 dbSNP
rs1236796210 3927 dbSNP
rs923906071 3928 dbSNP
rs944727931 3935 dbSNP
rs997549661 3942 dbSNP
rs532156569 3943 dbSNP
rs551928801 3946 dbSNP
rs1439837441 3948 dbSNP
rs1040408623 3956 dbSNP
rs1324105099 3958 dbSNP
rs186710114 3971 dbSNP
rs1182978263 3972 dbSNP
rs1385774776 3976 dbSNP
rs142356335 3981 dbSNP
rs1420736867 3983 dbSNP
rs1156359015 3987 dbSNP
rs1049365668 3992 dbSNP
rs887650591 4000 dbSNP
rs547881776 4004 dbSNP
rs568045576 4022 dbSNP
rs1178106420 4023 dbSNP
rs1190106901 4026 dbSNP
rs759193394 4032 dbSNP
rs1005171508 4053 dbSNP
rs1016089679 4059 dbSNP
rs373557502 4060 dbSNP
rs1280915045 4074 dbSNP
rs1336408413 4074 dbSNP
rs536787924 4076 dbSNP
rs573435671 4077 dbSNP
rs1229910930 4081 dbSNP
rs1305017489 4085 dbSNP
rs959960961 4086 dbSNP
rs1294990112 4088 dbSNP
rs1380574800 4090 dbSNP
rs748032879 4091 dbSNP
rs771845286 4111 dbSNP
rs1314008979 4112 dbSNP
rs879579384 4122 dbSNP
rs912901740 4128 dbSNP
rs1374031516 4137 dbSNP
rs1224420667 4139 dbSNP
rs557004044 4140 dbSNP
rs967067479 4142 dbSNP
rs1265222510 4144 dbSNP
rs1321606859 4150 dbSNP
rs1475549633 4155 dbSNP
rs978953722 4156 dbSNP
rs1190443737 4164 dbSNP
rs1202806103 4172 dbSNP
rs1425016646 4174 dbSNP
rs1251636885 4180 dbSNP
rs925474012 4185 dbSNP
rs1034041876 4187 dbSNP
rs936860682 4188 dbSNP
rs989951887 4189 dbSNP
rs773000780 4201 dbSNP
rs1269805179 4209 dbSNP
rs1225413598 4211 dbSNP
rs531912528 4216 dbSNP
rs1039277441 4220 dbSNP
rs922152082 4225 dbSNP
rs933560131 4228 dbSNP
rs1331328763 4232 dbSNP
rs1410846525 4233 dbSNP
rs764211110 4242 dbSNP
rs968248188 4244 dbSNP
rs191166706 4246 dbSNP
rs1459050430 4248 dbSNP
rs1417970672 4250 dbSNP
rs978290928 4262 dbSNP
rs1474205467 4264 dbSNP
rs1253851182 4265 dbSNP
rs1182319201 4267 dbSNP
rs1437003077 4271 dbSNP
rs1272650829 4273 dbSNP
rs147921317 4274 dbSNP
rs1337148941 4283 dbSNP
rs559160007 4285 dbSNP
rs140106313 4289 dbSNP
rs775000458 4296 dbSNP
rs1001746033 4302 dbSNP
rs1175823228 4303 dbSNP
rs1333383739 4305 dbSNP
rs921995236 4320 dbSNP
rs541662321 4330 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545213. RNA binding protein: AGO2. Condition:Control ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
CLIP-seq Support 1 for dataset GSM4903833
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_a
Location of target site NM_006345 | 3UTR | UGUGAUUUUGACCUGAGUGCUAAGAGAAUCACUCUCCUUACCUAGUUAUCUACAAAUGUUCAUUCCAGAAAUGUUUAGUUACUGAAUUGAAUGAAGAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903834
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_b
Location of target site NM_006345 | 3UTR | CUGAGUGCUAAGAGAAUCACUCUCCUUACCUAGUUAUCUACAAAUGUUCAUUCCAGAAAUGUUUAGUUACUGAAUUGAAUGAAGAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM4903835
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_c
Location of target site NM_006345 | 3UTR | CCUGAGUGCUAAGAGAAUCACUCUCCUUACCUAGUUAUCUACAAAUGUUCAUUCCAGAAAUGUUUAGUUACUGAAUUGAAUGAAGAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM4903836
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_a
Location of target site NM_006345 | 3UTR | UCUCCUUACCUAGUUAUCUACAAAUGUUCAUUCCAGAAAUGUUUAGUUACUGAAUUGAAUGAAGAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 5 for dataset GSM4903837
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_b
Location of target site NM_006345 | 3UTR | UCCUUACCUAGUUAUCUACAAAUGUUCAUUCCAGAAAUGUUUAGUUACUGAAUUGAAUGAAGAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 6 for dataset GSM4903838
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_c
Location of target site NM_006345 | 3UTR | UAUCUACAAAUGUUCAUUCCAGAAAUGUUUAGUUACUGAAUUGAAUGAAGAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 7 for dataset GSM545213
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / Control
Location of target site ENST00000264451.7 | 3UTR | AAUUGAAUGAAGACA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
94 hsa-miR-4708-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT095681 RBM27 RNA binding motif protein 27 2 4
MIRT104033 USP42 ubiquitin specific peptidase 42 2 6
MIRT114773 CMPK1 cytidine/uridine monophosphate kinase 1 2 2
MIRT246923 CCND1 cyclin D1 2 2
MIRT392569 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT443949 LRIT3 leucine rich repeat, Ig-like and transmembrane domains 3 2 2
MIRT446695 PAPPA pappalysin 1 2 2
MIRT447383 VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1 2 2
MIRT449321 FAM120AOS family with sequence similarity 120A opposite strand 2 2
MIRT449717 C1orf61 chromosome 1 open reading frame 61 2 2
MIRT449738 TAB2 TGF-beta activated kinase 1/MAP3K7 binding protein 2 2 2
MIRT450531 PGLS 6-phosphogluconolactonase 2 2
MIRT455650 YARS tyrosyl-tRNA synthetase 2 2
MIRT458036 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT463468 ZC3HAV1L zinc finger CCCH-type containing, antiviral 1 like 2 2
MIRT466677 TAF1D TATA-box binding protein associated factor, RNA polymerase I subunit D 2 4
MIRT467789 SLC2A14 solute carrier family 2 member 14 2 2
MIRT468167 SGPL1 sphingosine-1-phosphate lyase 1 2 2
MIRT468652 SECISBP2L SECIS binding protein 2 like 2 6
MIRT469380 RER1 retention in endoplasmic reticulum sorting receptor 1 2 2
MIRT470346 PPP2R5E protein phosphatase 2 regulatory subunit B'epsilon 2 2
MIRT472418 NCKAP1 NCK associated protein 1 2 2
MIRT474612 KLF3 Kruppel like factor 3 2 2
MIRT478703 CSRNP2 cysteine and serine rich nuclear protein 2 2 2
MIRT481008 BBC3 BCL2 binding component 3 2 4
MIRT483098 TFPI tissue factor pathway inhibitor 2 2
MIRT485113 SHISA6 shisa family member 6 2 2
MIRT497533 ZNF607 zinc finger protein 607 2 2
MIRT500644 TUBB2A tubulin beta 2A class IIa 2 6
MIRT500890 STRN striatin 2 4
MIRT501900 MED13 mediator complex subunit 13 2 2
MIRT506646 MAPK1 mitogen-activated protein kinase 1 2 4
MIRT512675 ENO4 enolase family member 4 2 2
MIRT516977 OR7D2 olfactory receptor family 7 subfamily D member 2 2 2
MIRT528754 RPS27 ribosomal protein S27 2 6
MIRT539670 ZBTB44 zinc finger and BTB domain containing 44 2 2
MIRT544129 PPIL1 peptidylprolyl isomerase like 1 2 2
MIRT546382 STOX2 storkhead box 2 2 4
MIRT562143 IGFBP5 insulin like growth factor binding protein 5 2 2
MIRT568713 TMEM30B transmembrane protein 30B 2 2
MIRT571029 CENPP centromere protein P 2 2
MIRT572781 ZNF277 zinc finger protein 277 2 2
MIRT573162 SLC30A9 solute carrier family 30 member 9 2 2
MIRT609126 NUDT3 nudix hydrolase 3 2 2
MIRT609284 OAS3 2'-5'-oligoadenylate synthetase 3 2 2
MIRT613430 GALNT6 polypeptide N-acetylgalactosaminyltransferase 6 2 2
MIRT613770 TTC38 tetratricopeptide repeat domain 38 2 2
MIRT616645 LRAT lecithin retinol acyltransferase 2 4
MIRT630892 SLC25A33 solute carrier family 25 member 33 2 2
MIRT636526 FAXC failed axon connections homolog 2 4
MIRT641394 NUBPL nucleotide binding protein like 2 2
MIRT641412 SCN2B sodium voltage-gated channel beta subunit 2 2 2
MIRT642528 CERS4 ceramide synthase 4 2 2
MIRT643186 HYPK huntingtin interacting protein K 2 2
MIRT647800 FRMD8 FERM domain containing 8 2 2
MIRT652150 TRIM71 tripartite motif containing 71 2 2
MIRT652602 TIMM8A translocase of inner mitochondrial membrane 8A 2 2
MIRT661606 C2orf15 chromosome 2 open reading frame 15 2 2
MIRT666339 SKAP2 src kinase associated phosphoprotein 2 2 2
MIRT670414 ELP2 elongator acetyltransferase complex subunit 2 2 2
MIRT671122 ZNF573 zinc finger protein 573 2 2
MIRT671155 ANKRD9 ankyrin repeat domain 9 2 2
MIRT671338 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT671869 ZNF429 zinc finger protein 429 2 2
MIRT671974 IKZF3 IKAROS family zinc finger 3 2 2
MIRT672064 KIAA0930 KIAA0930 2 2
MIRT672654 SLC25A16 solute carrier family 25 member 16 2 4
MIRT672673 GTF2H5 general transcription factor IIH subunit 5 2 2
MIRT672771 UBE2V2 ubiquitin conjugating enzyme E2 V2 2 2
MIRT672929 LRRC2 leucine rich repeat containing 2 2 2
MIRT673159 C1orf50 chromosome 1 open reading frame 50 2 2
MIRT673272 RUNDC1 RUN domain containing 1 2 2
MIRT673332 THAP1 THAP domain containing 1 2 2
MIRT673351 SLC35F6 solute carrier family 35 member F6 2 2
MIRT673667 ZNF440 zinc finger protein 440 2 2
MIRT673904 DCTN6 dynactin subunit 6 2 2
MIRT674096 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674401 MYCBP MYC binding protein 2 2
MIRT674525 PRR23A proline rich 23A 2 2
MIRT674793 NPR1 natriuretic peptide receptor 1 2 2
MIRT674833 ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 2 2
MIRT675066 FGD6 FYVE, RhoGEF and PH domain containing 6 2 2
MIRT675080 CCR6 C-C motif chemokine receptor 6 2 2
MIRT675126 FSD2 fibronectin type III and SPRY domain containing 2 2 2
MIRT679401 IL10RB interleukin 10 receptor subunit beta 2 2
MIRT689229 RPS19 ribosomal protein S19 2 2
MIRT694008 PPIL4 peptidylprolyl isomerase like 4 2 2
MIRT699671 SFT2D2 SFT2 domain containing 2 2 2
MIRT706213 ACOT9 acyl-CoA thioesterase 9 2 2
MIRT706548 GJD2 gap junction protein delta 2 2 2
MIRT707418 RRP7A ribosomal RNA processing 7 homolog A 2 2
MIRT710648 GLUL glutamate-ammonia ligase 2 2
MIRT719393 NPCA1 Nasopharyngeal carcinoma 1 2 2
MIRT720166 PNPO pyridoxamine 5'-phosphate oxidase 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4708-5p Fulvestrant 17756771 NSC719276 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-miR-4708-5p Tamoxifen 2733525 NSC180973 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-4708-5p Tripterygium wilfordii Hook F sensitive tissue
hsa-miR-4708-5p Cisplatin 5460033 NSC119875 approved sensitive cell line
hsa-miR-4708-5p Paclitaxel 36314 NSC125973 approved resistant cell line (A2780)
hsa-miR-4708-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)

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