pre-miRNA Information | |
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pre-miRNA | mmu-mir-466e |
Genomic Coordinates | chr2: 10479088 - 10479171 |
Synonyms | mmu-mir-466e, Mir466e |
Description | Mus musculus miR-466e stem-loop |
Comment | None |
RNA Secondary Structure | ![]() |
Mature miRNA Information | |
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Mature miRNA | mmu-miR-466e-3p |
Sequence | 51| UAUACAUACACGCACACAUAAGA |73 |
Evidence | Experimental |
Experiments | Cloned |
Putative Targets |
Gene Information | |||||||||||||||||||||
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Gene Symbol | Nacc2 | ||||||||||||||||||||
Synonyms | 0610020I02Rik, AI448087, Btbd14a, C030048H19Rik | ||||||||||||||||||||
Description | nucleus accumbens associated 2, BEN and BTB (POZ) domain containing | ||||||||||||||||||||
Transcript | NM_001037098 | ||||||||||||||||||||
Other Transcripts | NM_026495 | ||||||||||||||||||||
Expression | |||||||||||||||||||||
Putative miRNA Targets on Nacc2 | |||||||||||||||||||||
3'UTR of Nacc2 (miRNA target sites are highlighted) |
>Nacc2|NM_001037098|3'UTR
1 GTGGCCGGCAAGGCCAGCTCACAGGAACCCAGTACTAAAGCTGCTTGCATGCGTTACTAATACAAACAAATGTGATCAAG
81 CCACTTACCTACTGAACTGCTACTGCTGCCTGACAAAAATGTGATTTTTATTCTGCCTGTATTTAAAATGGATGAAGGAA
161 ACAAATGCATTCATTATACTGTAAACATTTAGGCCGCTGGCCACTCTCTGGGACAAAGGTCCCAGGGCAACTTTTTGATA
241 TTCCCCAGCTCAGTCTCCCGTGGTAGTGTTCTCTCTCCCTTCTTGGGGAGACAGAAGAGGGCACCGGGTCCCTGATGTCC
321 TGCCCTGACCCTGCCTCATCCACCCTTCTTATTCCCCTGCTCTGAAAGCAGAAGCTGGGGCAGCAGTGGCCTGGGGCTGG
401 AGGGGCAGACACGACACTCCATTCTTAACCATAAGGACCCCACTGGGACAGTGGGGGGAATGCTGGGCCCCCAGAGGCCA
481 GACTTCTCTTGTTTTCATTCCTCCGAAGAAGCTGCCTGCGTGCATGTATGTATGCGTGTGTGTGTGTGTGTGTGTGCGTG
561 TGTGTGTG TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATGTGTGTGTATGAGTATGTACGCACACACACATGAGTG
641 AGAGAGACAGAGAGAGAGAAAGAGAAAGAGGGGGGGCAGGAAGACCAGTGATGGCCCTGCAGTAGCTGTGGCTGGTCATC
721 TGGGGGTGGGGGAAAGATGAGGTGTTCCCCCCTCCATACCTGTGTCCTCACTCTGCTCCACCCAGACCCCCAGCGGCTGG
801 CCTGCTGATCCCCCCAGGGTCTCTCTGCCCCTGGCCATGGCTGTCCTCACCACCCTCTGCCTCTCCAGCCACTCTGGGAT
881 TTTGCTTGTTTGCTGTTTTTGTTTAGTTCAGATCTATTTTGTTTGTGGTTTGGAAACTTTCAGACCGAACAGAGAAAAAA
961 AAAAAAAAAAAAAGAAAAAAAAAAAGCGAGAGACTAGTGTCCCTGTTCCCAGCCTGCTGTGGATTTGGGTGAATACATGT
1041 CCATAACCCCCATCTTGGCCTCCCATTGGAGGCAGAGGGGCCCAGGAAAGTATAGCTATCTGTGTACAGCCAAGCTAGGC
1121 CCCTGTGGACCTGGCCAGCAGGACACTGCTGCCTGGGGTGGGCTTAGCGCTCACTGTGGGTGCCCGTGTAGTGGAAGGCA
1201 CAGGCCCTACAGGCCTGGGCCAGGGCAGTTGGCAGGTGTGGATCAACCTCACTGGGGACCAGAAACTTAGACTATCACGA
1281 GGACGGCACCTGTGGGGGCCGTGGAGGACTGCTGGTGGGTGAGAAGCTGGCGGTTTATCATTTTAAAGTGTGGGATATGC
1361 TCCCGAGGCTACTTTCCCAAGTGTCTCCTCTTGGACTCTTGTCTGAGGACTGCCTGCCCACCTGCAAAACCTAGCAGCTG
1441 CTGAGGTGCCCAAGGACACCGACTATAACAAACTTGAAAGGTCTCGTCCCTATCCCTCTATGCATCTTGAGTTTGCTGCC
1521 CTATGAACCCCCCACTGTGTGCCCACAGTCAGAGCAGTCTTTTCCCCATTGGAGGGTAGGAGGCCTGAGGTGCAGTTTAG
1601 ACTCCCTCTGTGTCACAGCCTCCTTTTTGCAGGCAATTCCCTGTCTTGGGGGCCTCACAGGGAGACCCCATACTGTGCTG
1681 ACTATACACGTCAATTCATGTATAGTCCTATCTTCCCCCTCCCCTCTTTTGGAAGACCTGTGGTGTGGAGAGGGAAAGGG
1761 GCATCATGGCAGGCACTGTGGGAACTGAGCTGAGCCCCTCCCCCTGCTCCTTGGTAACCCAAGGCCTGCATTCCTAGGGC
1841 CGGTTCAGAGGCTAGCTAATATCCAGCTCAGGAACTAGCTGCCCAGAGATGGACCTCTCACCTCTCCCATTTCCATCTTA
1921 CTCCTAGGTAGGTTGGAGCCCCAGCCAGCCCTTTAGTGACTTGGACCAAACCCTCCTGGTGCTGGGTGAAGACCATAGAA
2001 CTGTAGAGGGTACGGCAGGATTGGGGGCAGGGCTGTGCCCTTCCGCTCTGGAATATCCCTTCATCTGCTTCCTCCACCCA
2081 AATTTGCACTTTAATTTGACCATCCTTGGGGACCTTTGGGAGACAAACCCACCTATTTTGGTTGGTGGTAGAAGGGCTCT
2161 TTCTCATCCCTCCACTCCAAGATGAGCATGGTCCCACCCTGGGCCAGCATAGGGAGGGTGCCGCTGGCCATTAGAGGAAC
2241 AGTGGCCGCACAGAATGCCTGACCACTGCTCGGGCTAGCACAATGTCCTCAACCTCTGTCCCTTAGTGTTTATAATTGCC
2321 ATCTGTTTTGTTCTGGGTAAGGAAGGCAAGAGCTATAGGTAAAACTTCAATAATATTAAATGTGAATGGATTCTGAGCTC
2401 TCCCTGTGCCCCGGGTGGGCCAGACAGAGCGTTTTGCACTAATGTGTCCCATTGTGGACGTTGTGGGGATCGTTTGCAGA
2481 CATGCATGGCCAATGACTGTACCTGCTTAGGGGAGGGGCACTCCCTCTGCATCCTGAATGTACTGCGAGGCAGGCGGGTG
2561 GCAGGCCTGGGCTCCGAGGGGCCTTCCAGAGTGCCTTAGCATCTTTTGATTATTTTTTTCAAGGAAAACCAATTTAAAAA
2641 ACCAGACTCCCTCCTTTGTTTACAAGATGACTAATTCCAGAATCGGGGCTGTCTTGTCCTGTCACGTGACCCTGACTTGT
2721 CCAGACCCTATAGGTGAGAGCCTCTCAGCATTTGTCAGATGTCTACACCTCTGTTCCTAGCTTGACTACTAGCAATATGC
2801 ACATACTATGTAGAGTCTATTGTAGAAACTATTGCTACATCAGCATCTTTGCCAGGACGACAGTCGGGACTGGATAGGGT
2881 TGGAGCTACTGGGACAGAGCTGGATCCAGCCATGAGTCTTATGTCCTCCCAGAGCAGACAATAGTCCCTGAGGCAGCTGG
2961 GACGAATACAGCAGGTCTGGGGCAAGGGACCAGAGACAGGGCTGATAGTGTGAGCTTGGAGGTGCTGCCTGTCTGCCCGG
3041 CTGTCTCAGTACTTGAATTCTGTATTGTTTTCTATACCAGTTGCTTCAGCTAACATCTGATTTGGTGTCTTACTTTGCCC
3121 TTGGATGTAGATGCAGCCAGTGATGTATGAAAGGCAATTGAGGAGAGACTCTGAGGGGTCCTTTGTGGTGTGACTGCAGG
3201 TGTGGGCCTCGAAGAAAACTAGATGTGTGGTGTTTGTTTAGAACCTAAAGGAAGGCAGAAAGGGGCTGTGAGAGCTGGCA
3281 AGCTGACAGGGCCAGTCCCCTCCAAGGGACTGTGGGGTGCCTGCTGCTACCTGCTTCAACAGCAGGACCTTCCCAAGCCC
3361 AGTGCATGTTGTGCTCTGCCCCACTGTCCTCTGCTTGGGTTCCCTAAAGATGGTGATTCTTAGCTGACTTGGGGAAGAGC
3441 AGGTGGCCTATCAACCAGCTGAAAACTCGAAAGACCCTGTTAGAACCTGCTTGCCGCAGATCCCAGATGGGAATGGCGAC
3521 AAGCACATGATCTGTCAGCTTTACGCACTTCACTTCGTGGAAAGGTGCTGCTGCTGGGTGGTTCTGCATGTCAGGCAGCT
3601 CAGCCTATGCTGCTAGAAGAAGGGCTCAGTACAAAGTGTTTCAAAAGTGGCAAAGGTGTTTGCTTTGTTTGTTTTGTTTT
3681 CCTAGAAAGGAAAAGGATGCAGGATCTAAAACCTTCTGATTGAATAGCCTCTGCTTGTGTCCCATTGGTCCCCTCACTGC
3761 AAGCTCGATTGTGATTTTTATGTCAAAGGAAGCCAAAATTTGCAATACTATTTTTAGCAGACAAAAAGATAACTCGGTAT
3841 AAAATGTATAAATATTTTTGACTTGAACATTTTGGGTGTCTCTGGGTGCAAGAAGAACATTAATCCCTTCAGGGGGATGT
3921 TTGGAGAACAGGACCGGAGGAAGGGGGTTGTTTTGAAGGCACTGTCCAGGGGTTAAAGTAGCATCATAATTCATGACTGT
4001 TAGGAATTAAGTTAATAAAGTCAGTGCTCCCCTACCTCTAAGGAGGCCTTCACAGAACCACTGAGCTAGAGCAGACACCA
4081 CATCTTGGCTTTCTTTTTAGGGAGGAGGAGGCTTTGGTTTTTGGTTTCTTTTGGTTTCCTTTTGTTTTGTCCCTCCAGCA
4161 TCCTCCTCTCTCTGTGCTGTGACCCCCGTAGTGACAAGACTGTTACTTTGTAGCCATGGCTGAAAACATTGTATCTATAA
4241 CAACAACAAAAAATAAAACAAACAAACACAGCTATGTCCGCAAGCCGACCAGGGAAACCCTAGAGCTTTGAGCCTGTGCT
4321 CAGAGCTGTTTCAGAAGTGGAAATCCATGACAAAAGGATGTTCTCGTTAACTGTAAGGCGCTTTGTAAAGTTCACATTTA
4401 CAGAATAATAAAGTCAATTCAAACCC
Target sites
Provided by authors
Predicted by miRanda
DRVs
SNPs
DRVs & SNPs
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miRNA-target interactions (Predicted by miRanda) |
|
Experimental Support 1 for Functional miRNA-Target Interaction | |
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miRNA:Target | ---- |
Validation Method |
|
Conditions | mESCs |
Location of target site | 3'UTR |
Tools used in this research | TargetScan , miRTarCLIP , Piranha |
Original Description (Extracted from the article) |
...
HITS-CLIP data was present in GSM622570. RNA binding protein: AGO2. Condition:WT1A
HITS-CLIP data was present in GSM622572. RNA binding protein: AGO2. Condition:WT2
... - Leung AK; Young AG; Bhutkar A; Zheng GX; et al., 2011, Nature structural & molecular biology. |
Article |
- Leung AK; Young AG; Bhutkar A; Zheng GX; et al. - Nature structural & molecular biology, 2011
MicroRNAs (miRNAs) are 19-22-nucleotide noncoding RNAs that post-transcriptionally regulate mRNA targets. We have identified endogenous miRNA binding sites in mouse embryonic stem cells (mESCs), by performing photo-cross-linking immunoprecipitation using antibodies to Argonaute (Ago2) followed by deep sequencing of RNAs (CLIP-seq). We also performed CLIP-seq in Dicer(-)/(-) mESCs that lack mature miRNAs, allowing us to define whether the association of Ago2 with the identified sites was miRNA dependent. A significantly enriched motif, GCACUU, was identified only in wild-type mESCs in 3' untranslated and coding regions. This motif matches the seed of a miRNA family that constitutes ~68% of the mESC miRNA population. Unexpectedly, a G-rich motif was enriched in sequences cross-linked to Ago2 in both the presence and absence of miRNAs. Expression analysis and reporter assays confirmed that the seed-related motif confers miRNA-directed regulation on host mRNAs and that the G-rich motif can modulate this regulation.
LinkOut: [PMID: 21258322]
|
Experimental Support 2 for Functional miRNA-Target Interaction | |||||||
---|---|---|---|---|---|---|---|
miRNA:Target | ---- | ||||||
Validation Method |
|
||||||
Conditions | CD4+ T cells (C57BL/6) | ||||||
Disease | MIMAT0004880 | ||||||
Location of target site | 3'UTR | ||||||
Tools used in this research | TargetScan , miRTarCLIP , Piranha | ||||||
Original Description (Extracted from the article) |
...
"HITS-CLIP data was present in GSM1013594. RNA binding protein: AGO2. Condition:CD4+ T cells
... - Loeb GB; Khan AA; Canner D; Hiatt JB; et al., 2012, Molecular cell. |
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miRNA-target interactions (Provided by authors) |
|
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Article |
- Loeb GB; Khan AA; Canner D; Hiatt JB; et al. - Molecular cell, 2012
MicroRNAs (miRNAs) are essential components of gene regulation, but identification of miRNA targets remains a major challenge. Most target prediction and discovery relies on perfect complementarity of the miRNA seed to the 3' untranslated region (UTR). However, it is unclear to what extent miRNAs target sites without seed matches. Here, we performed a transcriptome-wide identification of the endogenous targets of a single miRNA-miR-155-in a genetically controlled manner. We found that approximately 40% of miR-155-dependent Argonaute binding occurs at sites without perfect seed matches. The majority of these noncanonical sites feature extensive complementarity to the miRNA seed with one mismatch. These noncanonical sites confer regulation of gene expression, albeit less potently than canonical sites. Thus, noncanonical miRNA binding sites are widespread, often contain seed-like motifs, and can regulate gene expression, generating a continuum of targeting and regulation.
LinkOut: [PMID: 23142080]
|
Experimental Support 3 for Functional miRNA-Target Interaction | |
---|---|
miRNA:Target | ---- |
Validation Method |
|
Conditions | Liver |
Location of target site | 3'UTR |
Tools used in this research | TargetScan , miRTarCLIP , Piranha |
Original Description (Extracted from the article) |
...
HITS-CLIP data was present in ERR266293. RNA binding protein: AGO2. Condition:A_Liver partial hapatectomy 36h
HITS-CLIP data was present in ERR266298. RNA binding protein: AGO2. Condition:A_Untreated
... - Schug J; McKenna LB; Walton G; Hand N; et al., 2013, BMC genomics. |
Article |
- Schug J; McKenna LB; Walton G; Hand N; et al. - BMC genomics, 2013
BACKGROUND: Validation of physiologic miRNA targets has been met with significant challenges. We employed HITS-CLIP to identify which miRNAs participate in liver regeneration, and to identify their target mRNAs. RESULTS: miRNA recruitment to the RISC is highly dynamic, changing more than five-fold for several miRNAs. miRNA recruitment to the RISC did not correlate with changes in overall miRNA expression for these dynamically recruited miRNAs, emphasizing the necessity to determine miRNA recruitment to the RISC in order to fully assess the impact of miRNA regulation. We incorporated RNA-seq quantification of total mRNA to identify expression-weighted Ago footprints, and developed a microRNA regulatory element (MRE) prediction algorithm that represents a greater than 20-fold refinement over computational methods alone. These high confidence MREs were used to generate candidate 'competing endogenous RNA' (ceRNA) networks. CONCLUSION: HITS-CLIP analysis provide novel insights into global miRNA:mRNA relationships in the regenerating liver.
LinkOut: [PMID: 23597149]
|
Experimental Support 4 for Functional miRNA-Target Interaction | |
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miRNA:Target | ---- |
Validation Method |
|
Conditions | C2C12 |
Location of target site | 3'UTR |
Tools used in this research | TargetScan , miRTarCLIP , Piranha |
Original Description (Extracted from the article) |
...
HITS-CLIP data was present in GSM1385342. RNA binding protein: 聽AGO2. Condition:C2C12_GM_Ago2_CLIP-Seq_myoblast
HITS-CLIP data was present in GSM1385343. RNA binding protein: 聽AGO2. Condition:C2C12_DM_Ago2_CLIP-Seq_myotubes
... - Zhang X; Zuo X; Yang B; Li Z; Xue Y; Zhou et al., 2014, Cell. |
Article |
- Zhang X; Zuo X; Yang B; Li Z; Xue Y; Zhou et al. - Cell, 2014
MicroRNAs are well known to mediate translational repression and mRNA degradation in the cytoplasm. Various microRNAs have also been detected in membrane-compartmentalized organelles, but the functional significance has remained elusive. Here, we report that miR-1, a microRNA specifically induced during myogenesis, efficiently enters the mitochondria where it unexpectedly stimulates, rather than represses, the translation of specific mitochondrial genome-encoded transcripts. We show that this positive effect requires specific miR:mRNA base-pairing and Ago2, but not its functional partner GW182, which is excluded from the mitochondria. We provide evidence for the direct action of Ago2 in mitochondrial translation by crosslinking immunoprecipitation coupled with deep sequencing (CLIP-seq), functional rescue with mitochondria-targeted Ago2, and selective inhibition of the microRNA machinery in the cytoplasm. These findings unveil a positive function of microRNA in mitochondrial translation and suggest a highly coordinated myogenic program via miR-1-mediated translational stimulation in the mitochondria and repression in the cytoplasm.
LinkOut: [PMID: 25083871]
|
CLIP-seq Support 1 for dataset GSM622570 | |
---|---|
Method / RBP | HITS-CLIP / AGO2 |
Cell line / Condition | mESCs / WT1A |
Location of target site | NM_001037098 | 3UTR | GUAUGCGUGUGUGUGUGUGUGUGUGUGCGUGUGUGUGUGUGUGUGUGUGUGU |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 21258322 / GSE25310 |
CLIP-seq Viewer | Link |
CLIP-seq Support 2 for dataset GSM622572 | |
---|---|
Method / RBP | HITS-CLIP / AGO2 |
Cell line / Condition | mESCs / WT2 |
Location of target site | NM_001037098 | 3UTR | AUGCGUGUGUGUGUGUGUGUGUGUGCGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGCAUGU |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 21258322 / GSE25310 |
CLIP-seq Viewer | Link |
CLIP-seq Support 3 for dataset GSM1013594 | |
---|---|
Method / RBP | HITS-CLIP / AGO2 |
Cell line / Condition | CD4+ T cells (C57BL/6) / CD4+ T cells, WT, biological rep8 |
Location of target site | NM_026495 | 3UTR | UAUGCGUGUGUGUGUGUGUGUGUGUG |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 23142080 / GSE41285 |
CLIP-seq Viewer | Link |
CLIP-seq Support 4 for dataset ERR266293 | |
---|---|
Method / RBP | HITS-CLIP / AGO2 |
Cell line / Condition | Liver / A_Liver partial hapatectomy 36h |
Location of target site | NM_026495 | 3UTR | UGUAUGCGUGUGUGUGUGUGUGUGUGUGCGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGCAUGUGUGU |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 23597149 / E-MTAB-1612 |
CLIP-seq Viewer | Link |
CLIP-seq Support 5 for dataset ERR266298 | |
---|---|
Method / RBP | HITS-CLIP / AGO2 |
Cell line / Condition | Liver / A_Untreated |
Location of target site | NM_001037098 | 3UTR | AUGCGUGUGUGUGUGUGUGUGUGUGCGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGCAUGUGU |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 23597149 / E-MTAB-1612 |
CLIP-seq Viewer | Link |
CLIP-seq Support 6 for dataset GSM1385342 | |
---|---|
Method / RBP | HITS-CLIP / AGO2 |
Cell line / Condition | C2C12 / C2C12_GM_Ago2_CLIP-Seq_myoblast |
Location of target site | NM_026495 | 3UTR | UGCGUGUGUGUGUGUGUGUGUGUGCGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGCAUGUGUGUGUA |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 25083871 / GSE57596 |
CLIP-seq Viewer | Link |
CLIP-seq Support 7 for dataset GSM1385343 | |
---|---|
Method / RBP | HITS-CLIP / AGO2 |
Cell line / Condition | C2C12 / C2C12_DM_Ago2_CLIP-Seq_myotubes |
Location of target site | NM_026495 | 3UTR | AUGUAUGUAUGCGUGUGUGUGUGUGUGUGUGUGCGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGCAUGUG |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 25083871 / GSE57596 |
CLIP-seq Viewer | Link |
186 mmu-miR-466e-3p Target Genes:
Functional analysis:
ID![]() |
Target | Description | Validation methods |
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Strong evidence | Less strong evidence | |||||||||||
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MIRT577218 | Zfp963 | zinc finger protein 963 | ![]() |
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2 | 6 | ||||||
MIRT577289 | Zfp446 | zinc finger protein 446 | ![]() |
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2 | 2 | ||||||
MIRT577554 | Tdrd1 | tudor domain containing 1 | ![]() |
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2 | 6 | ||||||
MIRT577573 | Tctn3 | tectonic family member 3 | ![]() |
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2 | 2 | ||||||
MIRT577705 | Slc28a3 | solute carrier family 28 (sodium-coupled nucleoside transporter), member 3 | ![]() |
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2 | 2 | ||||||
MIRT577720 | Slc22a15 | solute carrier family 22 (organic anion/cation transporter), member 15 | ![]() |
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2 | 2 | ||||||
MIRT577765 | Serpinb10 | serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 10 | ![]() |
1 | 1 | |||||||
MIRT577864 | Rassf5 | Ras association (RalGDS/AF-6) domain family member 5 | ![]() |
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2 | 2 | ||||||
MIRT577925 | Prl5a1 | prolactin family 5, subfamily a, member 1 | ![]() |
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2 | 2 | ||||||
MIRT577975 | Pira2 | paired-Ig-like receptor A2 | ![]() |
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2 | 2 | ||||||
MIRT577982 | Pira1 | paired-Ig-like receptor A1 | ![]() |
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2 | 2 | ||||||
MIRT578457 | Ints12 | integrator complex subunit 12 | ![]() |
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2 | 2 | ||||||
MIRT578576 | Hist1h1d | histone cluster 1, H1d | ![]() |
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2 | 2 | ||||||
MIRT578612 | Haus2 | HAUS augmin-like complex, subunit 2 | ![]() |
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2 | 2 | ||||||
MIRT578669 | Gramd1c | GRAM domain containing 1C | ![]() |
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2 | 2 | ||||||
MIRT578694 | Golt1a | golgi transport 1A | ![]() |
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2 | 2 | ||||||
MIRT578832 | Fech | ferrochelatase | ![]() |
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2 | 2 | ||||||
MIRT578857 | Mtfr2 | mitochondrial fission regulator 2 | ![]() |
1 | 3 | |||||||
MIRT578898 | Erich1 | glutamate rich 1 | ![]() |
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2 | 2 | ||||||
MIRT579230 | Ccdc138 | coiled-coil domain containing 138 | ![]() |
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2 | 2 | ||||||
MIRT579236 | Casp8 | caspase 8 | ![]() |
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2 | 2 | ||||||
MIRT579263 | Bub1 | BUB1, mitotic checkpoint serine/threonine kinase | ![]() |
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2 | 2 | ||||||
MIRT579331 | Atf7 | activating transcription factor 7 | ![]() |
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2 | 2 | ||||||
MIRT579464 | Acot11 | acyl-CoA thioesterase 11 | ![]() |
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2 | 4 | ||||||
MIRT579502 | A630001G21Rik | RIKEN cDNA A630001G21 gene | ![]() |
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2 | 2 | ||||||
MIRT579550 | Tmem241 | transmembrane protein 241 | ![]() |
1 | 1 | |||||||
MIRT579628 | Mettl20 | electron transfer flavoprotein beta subunit lysine methyltransferase | ![]() |
1 | 1 | |||||||
MIRT579756 | Zfp608 | zinc finger protein 608 | ![]() |
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2 | 2 | ||||||
MIRT579920 | Zbtb39 | zinc finger and BTB domain containing 39 | ![]() |
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2 | 2 | ||||||
MIRT580179 | Twist2 | twist basic helix-loop-helix transcription factor 2 | ![]() |
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2 | 2 | ||||||
MIRT580204 | Ttc7 | tetratricopeptide repeat domain 7 | ![]() |
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2 | 2 | ||||||
MIRT580221 | Tspan12 | tetraspanin 12 | ![]() |
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2 | 2 | ||||||
MIRT580287 | Trhr | thyrotropin releasing hormone receptor | ![]() |
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2 | 2 | ||||||
MIRT580313 | Tnrc6b | trinucleotide repeat containing 6b | ![]() |
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2 | 2 | ||||||
MIRT580389 | Slc35g1 | solute carrier family 35, member G1 | ![]() |
1 | 1 | |||||||
MIRT580402 | Tmem167 | transmembrane protein 167 | ![]() |
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2 | 2 | ||||||
MIRT580422 | Tmem161b | transmembrane protein 161B | ![]() |
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2 | 2 | ||||||
MIRT580482 | Tigd5 | tigger transposable element derived 5 | ![]() |
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2 | 2 | ||||||
MIRT580511 | Tet3 | tet methylcytosine dioxygenase 3 | ![]() |
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2 | 2 | ||||||
MIRT580643 | Stxbp6 | syntaxin binding protein 6 (amisyn) | ![]() |
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2 | 4 | ||||||
MIRT580700 | Stard8 | START domain containing 8 | ![]() |
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2 | 2 | ||||||
MIRT580754 | Spry1 | sprouty homolog 1 (Drosophila) | ![]() |
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2 | 2 | ||||||
MIRT580818 | Snx27 | sorting nexin family member 27 | ![]() |
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2 | 2 | ||||||
MIRT580863 | Slc8a1 | solute carrier family 8 (sodium/calcium exchanger), member 1 | ![]() |
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2 | 2 | ||||||
MIRT580877 | Slc7a11 | solute carrier family 7 (cationic amino acid transporter, y+ system), member 11 | ![]() |
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2 | 2 | ||||||
MIRT581027 | Sipa1l1 | signal-induced proliferation-associated 1 like 1 | ![]() |
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2 | 2 | ||||||
MIRT581107 | Sept8 | septin 8 | ![]() |
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2 | 2 | ||||||
MIRT581119 | Sept3 | septin 3 | ![]() |
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2 | 2 | ||||||
MIRT581208 | Satb2 | special AT-rich sequence binding protein 2 | ![]() |
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2 | 2 | ||||||
MIRT581412 | Rbm47 | RNA binding motif protein 47 | ![]() |
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2 | 4 | ||||||
MIRT581498 | Pvrl4 | nectin cell adhesion molecule 4 | ![]() |
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2 | 2 | ||||||
MIRT581511 | Ptpro | protein tyrosine phosphatase, receptor type, O | ![]() |
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2 | 2 | ||||||
MIRT581550 | Ptdss1 | phosphatidylserine synthase 1 | ![]() |
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2 | 2 | ||||||
MIRT581612 | Prkcd | protein kinase C, delta | ![]() |
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2 | 2 | ||||||
MIRT581621 | Prkca | protein kinase C, alpha | ![]() |
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2 | 2 | ||||||
MIRT581701 | Ppm1k | protein phosphatase 1K (PP2C domain containing) | ![]() |
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2 | 2 | ||||||
MIRT581727 | Pofut1 | protein O-fucosyltransferase 1 | ![]() |
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2 | 2 | ||||||
MIRT581758 | Plxna1 | plexin A1 | ![]() |
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2 | 2 | ||||||
MIRT581814 | Plag1 | pleiomorphic adenoma gene 1 | ![]() |
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2 | 2 | ||||||
MIRT581840 | Piwil2 | piwi-like RNA-mediated gene silencing 2 | ![]() |
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2 | 2 | ||||||
MIRT581872 | Pik3ca | phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha | ![]() |
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2 | 2 | ||||||
MIRT581889 | Pias1 | protein inhibitor of activated STAT 1 | ![]() |
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2 | 2 | ||||||
MIRT581924 | Pgm2l1 | phosphoglucomutase 2-like 1 | ![]() |
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2 | 2 | ||||||
MIRT581979 | Pcsk5 | proprotein convertase subtilisin/kexin type 5 | ![]() |
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2 | 2 | ||||||
MIRT582089 | Ogdh | oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) | ![]() |
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2 | 2 | ||||||
MIRT582162 | Nln | neurolysin (metallopeptidase M3 family) | ![]() |
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2 | 2 | ||||||
MIRT582194 | Nfkbia | nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha | ![]() |
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2 | 2 | ||||||
MIRT582310 | Nacc2 | nucleus accumbens associated 2, BEN and BTB (POZ) domain containing | ![]() |
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2 | 8 | ||||||
MIRT582534 | Mapk1 | mitogen-activated protein kinase 1 | ![]() |
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2 | 2 | ||||||
MIRT582686 | Lhfpl4 | lipoma HMGIC fusion partner-like protein 4 | ![]() |
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2 | 6 | ||||||
MIRT582901 | Il3 | interleukin 3 | ![]() |
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2 | 2 | ||||||
MIRT582926 | Il15ra | interleukin 15 receptor, alpha chain | ![]() |
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2 | 2 | ||||||
MIRT582947 | Ikzf5 | IKAROS family zinc finger 5 | ![]() |
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2 | 2 | ||||||
MIRT583009 | Iars2 | isoleucine-tRNA synthetase 2, mitochondrial | ![]() |
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2 | 2 | ||||||
MIRT583029 | Htt | huntingtin | ![]() |
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2 | 2 | ||||||
MIRT583120 | Hecw1 | HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 | ![]() |
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2 | 2 | ||||||
MIRT583215 | Gpr123 | adhesion G protein-coupled receptor A1 | ![]() |
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2 | 6 | ||||||
MIRT583298 | Glra2 | glycine receptor, alpha 2 subunit | ![]() |
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2 | 2 | ||||||
MIRT583335 | Paxbp1 | PAX3 and PAX7 binding protein 1 | ![]() |
1 | 3 | |||||||
MIRT583370 | Gabra2 | gamma-aminobutyric acid (GABA) A receptor, subunit alpha 2 | ![]() |
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2 | 2 | ||||||
MIRT583404 | Fzd3 | frizzled class receptor 3 | ![]() |
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2 | 2 | ||||||
MIRT583537 | Fbxo45 | F-box protein 45 | ![]() |
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2 | 2 | ||||||
MIRT583598 | Fam63b | MINDY lysine 48 deubiquitinase 2 | ![]() |
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2 | 2 | ||||||
MIRT583638 | Tmem236 | transmembrane protein 236 | ![]() |
1 | 1 | |||||||
MIRT583975 | Dennd4a | DENN/MADD domain containing 4A | ![]() |
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2 | 2 | ||||||
MIRT584001 | Dcdc2a | doublecortin domain containing 2a | ![]() |
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2 | 2 | ||||||
MIRT584050 | Cysltr1 | cysteinyl leukotriene receptor 1 | ![]() |
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2 | 2 | ||||||
MIRT584093 | Csrnp3 | cysteine-serine-rich nuclear protein 3 | ![]() |
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2 | 2 | ||||||
MIRT584300 | Chic1 | cysteine-rich hydrophobic domain 1 | ![]() |
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2 | 2 | ||||||
MIRT584316 | Chek1 | checkpoint kinase 1 | ![]() |
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2 | 6 | ||||||
MIRT584366 | Cdk19 | cyclin-dependent kinase 19 | ![]() |
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2 | 2 | ||||||
MIRT584724 | Atp8b1 | ATPase, class I, type 8B, member 1 | ![]() |
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2 | 2 | ||||||
MIRT584781 | Arl8a | ADP-ribosylation factor-like 8A | ![]() |
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2 | 2 | ||||||
MIRT584804 | Arl15 | ADP-ribosylation factor-like 15 | ![]() |
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2 | 2 | ||||||
MIRT584827 | Arhgef33 | Rho guanine nucleotide exchange factor (GEF) 33 | ![]() |
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2 | 2 | ||||||
MIRT584906 | Alg6 | asparagine-linked glycosylation 6 (alpha-1,3,-glucosyltransferase) | ![]() |
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2 | 2 | ||||||
MIRT584953 | Adamts4 | a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 4 | ![]() |
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2 | 6 | ||||||
MIRT585037 | Lrrc71 | leucine rich repeat containing 71 | ![]() |
1 | 1 | |||||||
MIRT585057 | Pcnxl4 | pecanex homolog 4 | ![]() |
1 | 1 | |||||||
MIRT585104 | Zfp941 | zinc finger protein 941 | ![]() |
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2 | 2 | ||||||
MIRT585152 | Zfp874b | zinc finger protein 874b | ![]() |
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2 | 2 | ||||||
MIRT585337 | Ybey | ybeY metallopeptidase | ![]() |
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2 | 2 | ||||||
MIRT585398 | Wfdc12 | WAP four-disulfide core domain 12 | ![]() |
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2 | 2 | ||||||
MIRT585482 | Txlnb | taxilin beta | ![]() |
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2 | 2 | ||||||
MIRT585516 | Trp53rk | transformation related protein 53 regulating kinase B | ![]() |
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2 | 2 | ||||||
MIRT585552 | Tpte | transmembrane phosphatase with tensin homology | ![]() |
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2 | 2 | ||||||
MIRT585706 | Tbc1d24 | TBC1 domain family, member 24 | ![]() |
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2 | 2 | ||||||
MIRT585749 | Stat1 | signal transducer and activator of transcription 1 | ![]() |
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2 | 2 | ||||||
MIRT585894 | Slc1a7 | solute carrier family 1 (glutamate transporter), member 7 | ![]() |
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2 | 2 | ||||||
MIRT585919 | Slc16a9 | solute carrier family 16 (monocarboxylic acid transporters), member 9 | ![]() |
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2 | 2 | ||||||
MIRT586027 | Sass6 | SAS-6 centriolar assembly protein | ![]() |
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2 | 4 | ||||||
MIRT586036 | Rsad1 | radical S-adenosyl methionine domain containing 1 | ![]() |
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2 | 2 | ||||||
MIRT586137 | Rbm41 | RNA binding motif protein 41 | ![]() |
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2 | 2 | ||||||
MIRT586185 | Ptprr | protein tyrosine phosphatase, receptor type, R | ![]() |
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2 | 2 | ||||||
MIRT586347 | Pdxk | pyridoxal (pyridoxine, vitamin B6) kinase | ![]() |
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2 | 2 | ||||||
MIRT586392 | Padi2 | peptidyl arginine deiminase, type II | ![]() |
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2 | 4 | ||||||
MIRT586426 | Oip5 | Opa interacting protein 5 | ![]() |
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2 | 2 | ||||||
MIRT586504 | Neu4 | sialidase 4 | ![]() |
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2 | 2 | ||||||
MIRT586627 | Mfsd2b | major facilitator superfamily domain containing 2B | ![]() |
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2 | 2 | ||||||
MIRT586676 | Mbd4 | methyl-CpG binding domain protein 4 | ![]() |
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2 | 2 | ||||||
MIRT586952 | Gstt3 | glutathione S-transferase, theta 3 | ![]() |
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2 | 2 | ||||||
MIRT587235 | Nxpe3 | neurexophilin and PC-esterase domain family, member 3 | ![]() |
1 | 1 | |||||||
MIRT587548 | Cxcl5 | chemokine (C-X-C motif) ligand 5 | ![]() |
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2 | 2 | ||||||
MIRT587740 | Cd28 | CD28 antigen | ![]() |
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2 | 2 | ||||||
MIRT587785 | Ccpg1 | cell cycle progression 1 | ![]() |
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2 | 2 | ||||||
MIRT587902 | BC003965 | cDNA sequence BC003965 | ![]() |
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2 | 2 | ||||||
MIRT588023 | Akap7 | A kinase (PRKA) anchor protein 7 | ![]() |
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2 | 2 | ||||||
MIRT588064 | Fam211b | leucine rich repeat containing 75B | ![]() |
1 | 1 | |||||||
MIRT588077 | AI429214 | expressed sequence AI429214 | ![]() |
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2 | 2 | ||||||
MIRT588154 | Ccdc169 | coiled-coil domain containing 169 | ![]() |
1 | 1 | |||||||
MIRT588370 | Zfp462 | zinc finger protein 462 | ![]() |
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2 | 2 | ||||||
MIRT588437 | Ythdc2 | YTH domain containing 2 | ![]() |
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2 | 2 | ||||||
MIRT588493 | Wbp4 | WW domain binding protein 4 | ![]() |
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2 | 2 | ||||||
MIRT588518 | Uty | ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome | ![]() |
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2 | 2 | ||||||
MIRT588605 | Tsc22d3 | TSC22 domain family, member 3 | ![]() |
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2 | 2 | ||||||
MIRT588652 | Tmem200a | transmembrane protein 200A | ![]() |
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2 | 2 | ||||||
MIRT588747 | Synj2bp | synaptojanin 2 binding protein | ![]() |
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2 | 2 | ||||||
MIRT588778 | Strbp | spermatid perinuclear RNA binding protein | ![]() |
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2 | 2 | ||||||
MIRT588794 | Ss18l1 | SS18, nBAF chromatin remodeling complex subunit like 1 | ![]() |
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2 | 6 | ||||||
MIRT588817 | Srgap3 | SLIT-ROBO Rho GTPase activating protein 3 | ![]() |
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2 | 2 | ||||||
MIRT588838 | Sort1 | sortilin 1 | ![]() |
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2 | 2 | ||||||
MIRT588962 | Scn2a1 | sodium channel, voltage-gated, type II, alpha | ![]() |
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2 | 2 | ||||||
MIRT589067 | Rbbp9 | retinoblastoma binding protein 9, serine hydrolase | ![]() |
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2 | 2 | ||||||
MIRT589077 | Rbbp5 | retinoblastoma binding protein 5, histone lysine methyltransferase complex subunit | ![]() |
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2 | 2 | ||||||
MIRT589087 | Rasal2 | RAS protein activator like 2 | ![]() |
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2 | 2 | ||||||
MIRT589114 | Rasa2 | RAS p21 protein activator 2 | ![]() |
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2 | 2 | ||||||
MIRT589121 | Rai1 | retinoic acid induced 1 | ![]() |
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2 | 2 | ||||||
MIRT589139 | Rad51d | RAD51 paralog D | ![]() |
1 | 1 | |||||||
MIRT589277 | Pitpnb | phosphatidylinositol transfer protein, beta | ![]() |
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2 | 2 | ||||||
MIRT589409 | Nrf1 | nuclear respiratory factor 1 | ![]() |
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2 | 2 | ||||||
MIRT589459 | Nceh1 | neutral cholesterol ester hydrolase 1 | ![]() |
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2 | 2 | ||||||
MIRT589513 | Mtf1 | metal response element binding transcription factor 1 | ![]() |
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2 | 2 | ||||||
MIRT589634 | Loxl3 | lysyl oxidase-like 3 | ![]() |
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2 | 2 | ||||||
MIRT589758 | Iws1 | IWS1, SUPT6 interacting protein | ![]() |
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2 | 2 | ||||||
MIRT589896 | Gtpbp2 | GTP binding protein 2 | ![]() |
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2 | 2 | ||||||
MIRT589946 | Gfod1 | glucose-fructose oxidoreductase domain containing 1 | ![]() |
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2 | 2 | ||||||
MIRT590058 | Fbxl17 | F-box and leucine-rich repeat protein 17 | ![]() |
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2 | 4 | ||||||
MIRT590129 | Ephb3 | Eph receptor B3 | ![]() |
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2 | 2 | ||||||
MIRT590405 | Ccna2 | cyclin A2 | ![]() |
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2 | 2 | ||||||
MIRT590436 | Casz1 | castor zinc finger 1 | ![]() |
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2 | 2 | ||||||
MIRT590466 | Car5b | carbonic anhydrase 5b, mitochondrial | ![]() |
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2 | 2 | ||||||
MIRT590476 | Camsap2 | calmodulin regulated spectrin-associated protein family, member 2 | ![]() |
1 | 1 | |||||||
MIRT590512 | Bsn | bassoon | ![]() |
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2 | 6 | ||||||
MIRT590570 | B3gnt2 | UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 | ![]() |
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2 | 2 | ||||||
MIRT590731 | Ado | 2-aminoethanethiol (cysteamine) dioxygenase | ![]() |
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2 | 2 | ||||||
MIRT590816 | 1110059G10Rik | RIKEN cDNA 1110059G10 gene | ![]() |
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2 | 2 | ||||||
MIRT591122 | Oas3 | 2'-5' oligoadenylate synthetase 3 | ![]() |
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2 | 2 | ||||||
MIRT591368 | E2f1 | E2F transcription factor 1 | ![]() |
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2 | 2 | ||||||
MIRT592056 | Tbc1d13 | TBC1 domain family, member 13 | ![]() |
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2 | 2 | ||||||
MIRT592232 | Ly96 | lymphocyte antigen 96 | ![]() |
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2 | 2 | ||||||
MIRT592722 | Fbxl14 | F-box and leucine-rich repeat protein 14 | ![]() |
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2 | 6 | ||||||
MIRT592778 | Diap2 | diaphanous related formin 2 | ![]() |
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2 | 6 | ||||||
MIRT593254 | Tas1r3 | taste receptor, type 1, member 3 | ![]() |
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2 | 2 | ||||||
MIRT594456 | Evi2b | ecotropic viral integration site 2b | ![]() |
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2 | 2 | ||||||
MIRT594616 | Myt1l | myelin transcription factor 1-like | ![]() |
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2 | 2 | ||||||
MIRT594672 | Ehf | ets homologous factor | ![]() |
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2 | 2 | ||||||
MIRT594751 | Wdr89 | WD repeat domain 89 | ![]() |
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2 | 2 | ||||||
MIRT595407 | Arid2 | AT rich interactive domain 2 (ARID, RFX-like) | ![]() |
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2 | 2 | ||||||
MIRT595645 | Abi3bp | ABI gene family, member 3 (NESH) binding protein | ![]() |
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2 | 2 | ||||||
MIRT603345 | Slc16a10 | solute carrier family 16 (monocarboxylic acid transporters), member 10 | ![]() |
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2 | 2 | ||||||
MIRT604327 | Bpifc | BPI fold containing family C | ![]() |
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2 | 2 | ||||||
MIRT604500 | 2510049J12Rik | makorin, ring finger protein 2, opposite strand | ![]() |
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2 | 2 | ||||||
MIRT604864 | Mef2a | myocyte enhancer factor 2A | ![]() |
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2 | 2 | ||||||
MIRT605407 | Tacr2 | tachykinin receptor 2 | ![]() |
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2 | 2 | ||||||
MIRT605870 | Atpbd4 | diphthamine biosynthesis 6 | ![]() |
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2 | 2 | ||||||
MIRT606108 | Unc5c | unc-5 netrin receptor C | ![]() |
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2 | 2 |