miRTarBase - #MIRT583084


—
pre-miRNA Information
pre-miRNA mmu-mir-743b   
Genomic Coordinates chrX: 66777256 - 66777332
Description Mus musculus miR-743b stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA mmu-miR-743b-3p
Sequence 46| GAAAGACAUCAUGCUGAAUAGA |67
Evidence Experimental
Experiments Cloned
Putative Targets

Gene Information
Gene Symbol Hlcs   
Synonyms 410I21.SP6, D16Jhu34
Description holocarboxylase synthetase (biotin- ligase)
Transcript NM_139145   
Expression
Putative miRNA Targets on Hlcs
3'UTR of Hlcs
(miRNA target sites are highlighted)		 
>Hlcs|NM_139145|3'UTR
   1 CACCTTCCTGTGTCCCCAGACAGCTTGGATCTACTGCAACAGGGAAGCTGCTCCTGGGATCTCCTGGGAGCACTGAGCAG
  81 GCGCACTCCGCTTGCATAACTGTTGTCTCTGCCTGCCTAGGGCCTGGGAAGCTAATGCAGAGTTAGAGGCCAGTTGTTAA
 161 TTCTTCAGGTTGTGGGTTCCCTGCCCCCACCCCCTCCCCACCCCGGGATTTGGGACACATATATGTGGTTTTACTGGGTG
 241 TTTGAAGGTGCATCTGGTGAGGATTGACTCACAGGCGAAGAAGGGTCAGTTTAGCCTAGGAGTTTAGTTTGCCTTGTGAG
 321 GTATAGAAGTGCTCTTCCCCATGTGGGCTTGGATTTGTGTGTACTGGGAGGGAAATGAGAAGCAAGGGGTTAGGAATAGC
 401 GCTGAGATAGTACAAATATATCCCAAGGAGTGAAGGCCTTTAGCCCTCTGCTGTTGAAACAGTGAATGCCCACAGCTCAG
 481 GGGCATGCTCACTGCTGTCCCAGAACACACAAGTGTTGACCTGCACGTAGGGTTGTTGCTGGTTTCCTTTGTCAAGTTGG
 561 GCTTCTTGTAGTAGCCTGGAACACAGGACTGAAGGATGGCCACAGAAATGCTGCTAACCAGCGTTATCTCCTTTCCAGGA
 641 TCAGATGTGTCAGGTTTTAGATGTTTAAGCCATGATGGCAGCTTCCTTAGAGACAAAGGCTTGCCCAGGCTGATGGAGAC
 721 GTGGGCTCACCCTCTTGCCCACACAAGGGAGGATTCTTGGAGCTTTTAAGCTGATCAGTTGCAGGCTCTGTTAGAATGCC
 801 ACATCCCCATAAGCTTGTGTCCCCAAGCAGGGCCGAGTGCAGCACTGTATTGTAAGTCATGACTTTCTGCCCCCAATTTC
 881 ATAATGTCAGGAAGGAGAGAGAGAGAGACTGACACAAAAATGCCATCAGTTTGGAGAGACGTATGTGCGTGCAGAGCATG
 961 CCTGATTTTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTTTAAAAGAAGATGTTCAAAACTTGATGTGCT
1041 AAAACGTCTCCGTGGAAGAACAAAGGAGAGGAAGCCTTTCTGGGCTTGCGTTTCCAGATGTGCTCCGTGCTTTCCCGTGT
1121 ACCTCCCGTCTCTGTGGAGCTTGTGAATCATACCCATCGCTGCCCAGCCTGAAAGAACTAGTTCCTGTCTGCCCTCCTGC
1201 TTCCTGCCACTTCCACTGAAGTGGGCGGACGGAACAGATCGCTTCGCTTAGAGCAAGATCCTCGTCATAAACGAGTACCA
1281 TCTTTATCCAGCTTCTGTAGTCAGGGCCAACTCCAGAAACCAGAGGTCTTCGGCATAGAATCCACTCACCCTCAGCCTAG
1361 CAGAGTCAGCCCCATTTGAAGCAAAAAATAAAATAAATAAATAACAGGGTGAACTATACCAACCTGACGTGTGTTTGAGG
1441 GGCTGTGACACTAAAGGAACTTGAAAGTAACTTTTCTTGCAAATAAGACTTTGACTAATGTTTTTCTCAAAAAAAGAAAA
1521 AGATACATATATAAAATTTAGTTCCGCTATTTTTTTAAATTCATGCGAGTTTAAATAAAACTGTACGCCACCCCAAATTA
1601 TAAAGTGACAGGCCCAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGAGAGCATCTGTAAAATAT
1681 CATCAAGAATGAAGATCTCCAAGCTGGCTGTTGCAAAGGTTCATTTCTCAGACTTTGTAATATAAGGCTGTTCATCTCTC
1761 AGAACCGCCATCATTACATTTGAAATTTCTATGGGGGATTATTTAATGAAAAACATGCTATGTTTTATTTTAAGCTGAAG
1841 GCCTATTCTGGATAGTTCTACTTTGGGGAAAAAAATGTTATCATTTAATTTCCTTTCTGTAAGTTAAAACTAATGAAGTG
1921 TGGTCATGTCAGAGCAGACAGAGATGTTCTGGGCATGCTGATTGGCCCTGGGGTAGTTACACTGTTTGGGGGTATTCTTG
2001 CGTATGCAGACAGGACACTCCTTGTCTCGAGAGACAGCACAGCCTGAAGCACTGAAGCTGCATTCCCCACTGGCCTGACT
2081 TGGCCTCACATGAACCAAAGACTTCAGATTTCACATCGTAGAGAGCATTTCTGCCGATGGGGCGTGTGAAGGCTGCCACT
2161 GTACCCGCCACATGCGAGGGTATTCACACTCTCAGTGTCCCAGGACCTCCAAGAACTTTACAAGTCTCCTAACCTCGATG
2241 CCTCCTAATCTGGAGACGTGGCCACCTAACCCCGACTCTGTATTTGCCGTAAGCAGGTTACTCCTAGTGTTAACCTGCTT
2321 GCATATCTACCCCTGGGTGTTGGAAGGCACAGGTAAGCAAGCACTGGGTCTCACACAACTCAGCTGAAGCAGTGAGCGGC
2401 TTTGCTACCCTGACATGCCAGCAACGGGGCAACCTCATTCCTGGTTCATCTCTATGCATCTTTGAAATAAACAAAAATGT
2481 AAACCTTT
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' agAUA-AGUCGUAC-UACAGAAAg 5'
            |:| |  |::|| :||||||| 
Target 5' tgTGTGTGTGTGTGTGTGTCTTTa 3'
 989 - 1012 152.00 -9.70
2 
miRNA  3' agauAAGUCGUACUACAGAAAg 5'
              ||:: | | ||||:||| 
Target 5' agacTTTGAC-TAATGTTTTTc 3'
 1486 - 1506 137.00 -7.30
3 
miRNA  3' agAUAAGUCGU--ACUACAGAAAg 5'
            ||||  |:|  | ||| |||| 
Target 5' tgTATT--GTAAGTCATGACTTTc 3'
 846 - 867 126.00 -8.00
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Brain (Mouse neocortex)
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in Chi_BrainB_130_50. RNA binding protein: AGO. Condition:Brain B 2A8 P13 130 KD ...

- Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' agAUA-AGUCGUAC-UACAGAAAg 5'
            |:| |  |::|| :||||||| 
Target 5' ugUGUGUGUGUGUGUGUGUCUUUa 3'
 		11 - 34
Article - Chi SW; Zang JB; Mele A; Darnell RB
- Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions mESCs
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM622571. RNA binding protein: AGO2. Condition:WT1B ...

- Leung AK; Young AG; Bhutkar A; Zheng GX; et al., 2011, Nature structural & molecular biology.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' agAUA-AGUCGUAC-UACAGAAAg 5'
            |:| |  |::|| :||||||| 
Target 5' ugUGUGUGUGUGUGUGUGUCUUUa 3'
 		3 - 26
Article - Leung AK; Young AG; Bhutkar A; Zheng GX; et al.
- Nature structural & molecular biology, 2011
MicroRNAs (miRNAs) are 19-22-nucleotide noncoding RNAs that post-transcriptionally regulate mRNA targets. We have identified endogenous miRNA binding sites in mouse embryonic stem cells (mESCs), by performing photo-cross-linking immunoprecipitation using antibodies to Argonaute (Ago2) followed by deep sequencing of RNAs (CLIP-seq). We also performed CLIP-seq in Dicer(-)/(-) mESCs that lack mature miRNAs, allowing us to define whether the association of Ago2 with the identified sites was miRNA dependent. A significantly enriched motif, GCACUU, was identified only in wild-type mESCs in 3' untranslated and coding regions. This motif matches the seed of a miRNA family that constitutes ~68% of the mESC miRNA population. Unexpectedly, a G-rich motif was enriched in sequences cross-linked to Ago2 in both the presence and absence of miRNAs. Expression analysis and reporter assays confirmed that the seed-related motif confers miRNA-directed regulation on host mRNAs and that the G-rich motif can modulate this regulation.
LinkOut: [PMID: 21258322]
Experimental Support 3 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Liver
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in ERR266281. RNA binding protein: AGO2. Condition:A_Liver partial hapatectomy 48h HITS-CLIP data was present in ERR266287. RNA binding protein: AGO2. Condition:B_Liver partial hapatectomy 36h HITS-CLIP data was present in ERR266292. RNA binding protein: AGO2. Condition:B_Liver partial hapatectomy 48h HITS-CLIP data was present in ERR266293. RNA binding protein: AGO2. Condition:A_Liver partial hapatectomy 36h HITS-CLIP data was present in ERR266295. RNA binding protein: AGO2. Condition:B_Liver partial hapatectomy 1h HITS-CLIP data was present in ERR266300. RNA binding protein: AGO2. Condition:B_Untreated ...

- Schug J; McKenna LB; Walton G; Hand N; et al., 2013, BMC genomics.

Article - Schug J; McKenna LB; Walton G; Hand N; et al.
- BMC genomics, 2013
BACKGROUND: Validation of physiologic miRNA targets has been met with significant challenges. We employed HITS-CLIP to identify which miRNAs participate in liver regeneration, and to identify their target mRNAs. RESULTS: miRNA recruitment to the RISC is highly dynamic, changing more than five-fold for several miRNAs. miRNA recruitment to the RISC did not correlate with changes in overall miRNA expression for these dynamically recruited miRNAs, emphasizing the necessity to determine miRNA recruitment to the RISC in order to fully assess the impact of miRNA regulation. We incorporated RNA-seq quantification of total mRNA to identify expression-weighted Ago footprints, and developed a microRNA regulatory element (MRE) prediction algorithm that represents a greater than 20-fold refinement over computational methods alone. These high confidence MREs were used to generate candidate 'competing endogenous RNA' (ceRNA) networks. CONCLUSION: HITS-CLIP analysis provide novel insights into global miRNA:mRNA relationships in the regenerating liver.
LinkOut: [PMID: 23597149]
Experimental Support 4 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions C2C12
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1385342. RNA binding protein: 聽AGO2. Condition:C2C12_GM_Ago2_CLIP-Seq_myoblast HITS-CLIP data was present in GSM1385343. RNA binding protein: 聽AGO2. Condition:C2C12_DM_Ago2_CLIP-Seq_myotubes ...

- Zhang X; Zuo X; Yang B; Li Z; Xue Y; Zhou et al., 2014, Cell.

Article - Zhang X; Zuo X; Yang B; Li Z; Xue Y; Zhou et al.
- Cell, 2014
MicroRNAs are well known to mediate translational repression and mRNA degradation in the cytoplasm. Various microRNAs have also been detected in membrane-compartmentalized organelles, but the functional significance has remained elusive. Here, we report that miR-1, a microRNA specifically induced during myogenesis, efficiently enters the mitochondria where it unexpectedly stimulates, rather than represses, the translation of specific mitochondrial genome-encoded transcripts. We show that this positive effect requires specific miR:mRNA base-pairing and Ago2, but not its functional partner GW182, which is excluded from the mitochondria. We provide evidence for the direct action of Ago2 in mitochondrial translation by crosslinking immunoprecipitation coupled with deep sequencing (CLIP-seq), functional rescue with mitochondria-targeted Ago2, and selective inhibition of the microRNA machinery in the cytoplasm. These findings unveil a positive function of microRNA in mitochondrial translation and suggest a highly coordinated myogenic program via miR-1-mediated translational stimulation in the mitochondria and repression in the cytoplasm.
LinkOut: [PMID: 25083871]
CLIP-seq Support 1 for dataset Chi_BrainB_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition Brain (Mouse neocortex) / Brain B 2A8 P13 130 KD
Location of target site NM_139145 | 3UTR | UGUGUGUGUGUGUGUGUGUGUGUGUGUGUCUUUAA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM622571
Method / RBP HITS-CLIP / AGO2
Cell line / Condition mESCs / WT1B
Location of target site NM_139145 | 3UTR | UGUGUGUGUGUGUGUGUGUGUCUUUA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21258322 / GSE25310
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset ERR266281
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Liver / A_Liver partial hapatectomy 48h
Location of target site NM_139145 | 3UTR | UUGCGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUCUUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23597149 / E-MTAB-1612
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset ERR266287
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Liver / B_Liver partial hapatectomy 36h
Location of target site NM_139145 | 3UTR | UUUUGCGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUCUUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23597149 / E-MTAB-1612
CLIP-seq Viewer Link
CLIP-seq Support 5 for dataset ERR266292
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Liver / B_Liver partial hapatectomy 48h
Location of target site NM_139145 | 3UTR | UUUUGCGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUCUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23597149 / E-MTAB-1612
CLIP-seq Viewer Link
CLIP-seq Support 6 for dataset ERR266293
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Liver / A_Liver partial hapatectomy 36h
Location of target site NM_139145 | 3UTR | UUUGCGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUCUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23597149 / E-MTAB-1612
CLIP-seq Viewer Link
CLIP-seq Support 7 for dataset ERR266295
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Liver / B_Liver partial hapatectomy 1h
Location of target site NM_139145 | 3UTR | UGUGUGUGUGUGUGUGUGUGUGUGUCUUUAA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23597149 / E-MTAB-1612
CLIP-seq Viewer Link
CLIP-seq Support 8 for dataset ERR266300
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Liver / B_Untreated
Location of target site NM_139145 | 3UTR | UGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUCUUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23597149 / E-MTAB-1612
CLIP-seq Viewer Link
CLIP-seq Support 9 for dataset GSM1385342
Method / RBP HITS-CLIP /  AGO2
Cell line / Condition C2C12 / C2C12_GM_Ago2_CLIP-Seq_myoblast
Location of target site NM_139145 | 3UTR | GAUUUUGCGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUCUUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 25083871 / GSE57596
CLIP-seq Viewer Link
CLIP-seq Support 10 for dataset GSM1385343
Method / RBP HITS-CLIP /  AGO2
Cell line / Condition C2C12 / C2C12_DM_Ago2_CLIP-Seq_myotubes
Location of target site NM_139145 | 3UTR | UGAUUUUGCGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUCUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 25083871 / GSE57596
CLIP-seq Viewer Link
101 mmu-miR-743b-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT577961 Pm20d2 peptidase M20 domain containing 2 2 2
MIRT578387 Klra2 killer cell lectin-like receptor, subfamily A, member 2 2 6
MIRT579831 Zfhx3 zinc finger homeobox 3 2 8
MIRT580616 Syp synaptophysin 2 2
MIRT580731 Srrm4 serine/arginine repetitive matrix 4 2 2
MIRT581440 Rasa2 RAS p21 protein activator 2 2 2
MIRT582031 Pappa pregnancy-associated plasma protein A 2 2
MIRT582678 Lin28b lin-28 homolog B (C. elegans) 2 8
MIRT582831 Itih5 inter-alpha (globulin) inhibitor H5 2 2
MIRT583084 Hlcs holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase) 2 8
MIRT583879 Dusp18 dual specificity phosphatase 18 2 6
MIRT583900 Dstyk dual serine/threonine and tyrosine protein kinase 2 4
MIRT585980 Sfxn4 sideroflexin 4 2 4
MIRT590345 Cntn2 contactin 2 2 6
MIRT591765 Ppm1f protein phosphatase 1F (PP2C domain containing) 2 4
MIRT592938 Astn2 astrotactin 2 2 2
MIRT593579 Zfp709 zinc finger protein 709 2 2
MIRT593675 Slc5a3 solute carrier family 5 (inositol transporters), member 3 2 2
MIRT593750 Peg10 paternally expressed 10 2 2
MIRT593771 Nmnat3 nicotinamide nucleotide adenylyltransferase 3 2 2
MIRT593825 Krit1 KRIT1, ankyrin repeat containing 2 2
MIRT593859 Gm5460 predicted gene 5460 2 2
MIRT593871 Galnt10 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 2 2
MIRT593891 Elovl5 ELOVL family member 5, elongation of long chain fatty acids (yeast) 2 2
MIRT593935 Cxcl3 chemokine (C-X-C motif) ligand 3 2 2
MIRT593937 Cttnbp2nl CTTNBP2 N-terminal like 2 2
MIRT594001 Aptx aprataxin 2 2
MIRT594019 Tmem241 transmembrane protein 241 1 1
MIRT594730 Zfp931 zinc finger protein 931 2 2
MIRT594766 Tmlhe trimethyllysine hydroxylase, epsilon 2 2
MIRT594836 Opa3 optic atrophy 3 2 2
MIRT594873 Magt1 magnesium transporter 1 2 2
MIRT594927 Gm14326 predicted gene 14326 2 2
MIRT594941 Fosl2 fos-like antigen 2 2 2
MIRT594980 Eda2r ectodysplasin A2 receptor 2 2
MIRT595014 Cpd carboxypeptidase D 2 2
MIRT595076 Yae1d1 Yae1 domain containing 1 1 1
MIRT595132 Lrrc4c leucine rich repeat containing 4C 2 2
MIRT595148 Epha7 Eph receptor A7 2 2
MIRT595169 Zpbp zona pellucida binding protein 2 2
MIRT595180 Tsn translin 2 2
MIRT595185 Trim25 tripartite motif-containing 25 2 2
MIRT595187 Top2a topoisomerase (DNA) II alpha 2 2
MIRT595193 Tmtc3 transmembrane and tetratricopeptide repeat containing 3 2 2
MIRT595199 Tbc1d2b TBC1 domain family, member 2B 2 2
MIRT595204 St6gal1 beta galactoside alpha 2,6 sialyltransferase 1 2 2
MIRT595210 Snx27 sorting nexin family member 27 2 2
MIRT595226 Serinc1 serine incorporator 1 2 2
MIRT595229 Sema4d sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D 2 2
MIRT595232 Sec24a Sec24 related gene family, member A (S. cerevisiae) 2 2
MIRT595235 Scn3a sodium channel, voltage-gated, type III, alpha 2 2
MIRT595242 Rc3h1 RING CCCH (C3H) domains 1 2 2
MIRT595255 Ppm1k protein phosphatase 1K (PP2C domain containing) 2 2
MIRT595259 Plxna4 plexin A4 2 2
MIRT595264 Phf3 PHD finger protein 3 2 2
MIRT595271 Nxph1 neurexophilin 1 2 2
MIRT595273 Npas3 neuronal PAS domain protein 3 2 2
MIRT595298 Kcnv1 potassium channel, subfamily V, member 1 2 2
MIRT595317 Gna14 guanine nucleotide binding protein, alpha 14 2 2
MIRT595321 Gm10318 predicted gene 10318 2 2
MIRT595328 Galnt4 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4 2 2
MIRT595347 Frem2 Fras1 related extracellular matrix protein 2 2 2
MIRT595375 Epb4.1l4a erythrocyte membrane protein band 4.1 like 4a 2 2
MIRT595380 Dusp11 dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) 2 2
MIRT595383 Dek DEK oncogene (DNA binding) 2 2
MIRT595385 Dcun1d1 DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) 2 2
MIRT595391 Cetn3 centrin 3 2 2
MIRT595394 Cd8a CD8 antigen, alpha chain 2 2
MIRT595398 Asprv1 aspartic peptidase, retroviral-like 1 2 2
MIRT595403 Arid2 AT rich interactive domain 2 (ARID, RFX-like) 2 2
MIRT595414 Ankrd16 ankyrin repeat domain 16 2 2
MIRT595416 Anapc11 anaphase promoting complex subunit 11 2 2
MIRT595421 Akna AT-hook transcription factor 2 2
MIRT595438 9930013L23Rik cell migration inducing protein, hyaluronan binding 2 2
MIRT595441 9030617O03Rik D-glutamate cyclase 2 2
MIRT595459 Zswim6 zinc finger SWIM-type containing 6 2 2
MIRT595465 Tspan13 tetraspanin 13 2 2
MIRT595467 Tmem41b transmembrane protein 41B 2 2
MIRT595472 Sv2b synaptic vesicle glycoprotein 2 b 2 2
MIRT595475 Sgk3 serum/glucocorticoid regulated kinase 3 2 2
MIRT595480 Scaf11 SR-related CTD-associated factor 11 2 2
MIRT595485 Phox2b paired-like homeobox 2b 2 2
MIRT595490 Pgp phosphoglycolate phosphatase 2 2
MIRT595494 Nr1d2 nuclear receptor subfamily 1, group D, member 2 2 2
MIRT595511 Lrig1 leucine-rich repeats and immunoglobulin-like domains 1 2 2
MIRT595524 Grm2 glutamate receptor, metabotropic 2 2 2
MIRT595528 Foxn3 forkhead box N3 2 2
MIRT595536 Fign fidgetin 2 2
MIRT595546 Celf2 CUGBP, Elav-like family member 2 2 2
MIRT595553 Cd28 CD28 antigen 2 2
MIRT595840 Sumf1 sulfatase modifying factor 1 2 2
MIRT595953 Rab6a RAB6A, member RAS oncogene family 1 1
MIRT598445 Lix1 limb and CNS expressed 1 2 2
MIRT600750 Iws1 IWS1, SUPT6 interacting protein 2 2
MIRT601150 Bach2 BTB and CNC homology, basic leucine zipper transcription factor 2 2 2
MIRT602248 Grm1 glutamate receptor, metabotropic 1 2 2
MIRT603333 Slc35d2 solute carrier family 35, member D2 2 2
MIRT603399 Serpina1a serine (or cysteine) peptidase inhibitor, clade A, member 1A 2 2
MIRT604755 Rad51d RAD51 paralog D 1 1
MIRT605865 Atpbd4 diphthamine biosynthesis 6 2 2
MIRT606713 0610030E20Rik RIKEN cDNA 0610030E20 gene 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-743b Propranolol approved 4946 Quantitative real-time PCR heart 22847192 2012 down-regulated
miR-743b-3p (S)-3,5-dihydroxyphenylglycine (DHPG) NULL 443586 Quantitative real-time PCR mouse brain 22309833 2012 down-regulated

Error report submission