pre-miRNA Information
pre-miRNA mmu-mir-410   
Genomic Coordinates chr12: 109743715 - 109743795
Synonyms Mirn410, mmu-mir-410, Mir410
Description Mus musculus miR-410 stem-loop
Comment Seitz et al. predicted a cluster of 40 miRNAs in the imprinted human 14q32 domain, and confirmed the expression of a subset by Northern blot or primer extension in mouse .
RNA Secondary Structure

Mature miRNA Information
Mature miRNA mmu-miR-410-3p
Sequence 50| AAUAUAACACAGAUGGCCUGU |70
Evidence Experimental
Experiments Northern
Putative Targets

Gene Information
Gene Symbol Erc1   
Synonyms 4930404L01Rik, 5033405M01Rik, 9630025C19Rik, B430107L16Rik, CAST2, ELKS, Elks1, RAB6IP2A, RAB6IP2B, Rab6ip2, mKIAA1081
Description ELKS/RAB6-interacting/CAST family member 1
Transcript NM_053204   
Other Transcripts NM_178085   
Expression
Putative miRNA Targets on Erc1
3'UTR of Erc1
(miRNA target sites are highlighted)
>Erc1|NM_053204|3'UTR
   1 TGTGCTCCTGACAAGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCACACCAGA
  81 CTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTGAATGTTGCCTGCTCA
 161 AGTCTCCCTGGTCTCCATGAAGAACTGCCCTTGGCATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAAC
 241 AGGAAGCCAGAAGCCACTCAGCTCATCTGGAGCCCACTCAGATTCCGTGCTCCGGGAGCTTGGAGCTGAAGCTTTAGCAC
 321 GAGTGCTTTCTCCTCAGAGGGTTACAGAAGGAGGGAGGAGGTGACCAGGGACAAAGAGAAGAACGAATACTCCTCTCTGC
 401 GCCCGCGCTGCCCTCCTGTTTACCATCATGAGCCCCAGGTACAGGCCAGCTTCATGCAGCTTAGCTCTCAGCCTGTTGCC
 481 TGTCTCACCTGCACTGCTTTTAGTTGACAGGAGAAGGATGTTCACAGTGGTCACCCTGATCGCTCTTTAAGTCCTTTGAC
 561 CTTCCCATGCTACATTGGTAGGCTAAATGTCTGACTGAAGAGAAGAGGGCTTAATTTGTAGGGCCCTCTTGTCACTGCCT
 641 GCAGTTTTGTTCCTCAGAAGCTGTCCTGGAGGGCCAGGCTGATTCCTCCTGAGCATCACCCACAGTGCTCTCTGCTCCCA
 721 ACACCTTGCCCCAAGCTGCTGTTGACCAGGGGTTGCTAGAGTATGTGATCCACTGCCCACCTTCTCAGCTTTACTCTCAA
 801 GATACAACCACAGAGCCACAGCCTTGTACCTGCCTAGAAACTTCTTTTGGCACAACTGAGTTTGTCTTAATGCACACACA
 881 TTCCCTCCTCCAATTCATTCACTCAAAAAATAGTATGAAATGCCTACTTGTGTGCACATCCATGTGCACAGTGTCATCCT
 961 TGGAAAAGCCTCGGATAGGGATGGTGTGGAAGCCCTGTGAGATGTGCTCAGTTGAATCATGGCAGTGAACGCATACCTTC
1041 TCCCTTCCTTCTTCGCAGACCAGCATTCTTTGTTCTCCACCCTCATGGCATCTATGGGCTTGGGTGAGCCACCTCTCTGC
1121 CTGGAAGGTCCCATGTGGTAGGTCAGGATCTTTGCTGTCAGTGTTACTACCCTGAAACATGTTCGTTTGTGTCAGCTGCC
1201 TGCTTAACACAGCCATGCACACCTCATGGGCTTGGCCATGCTGCAATCAGATGCAGATCCCCCCAACCCCATCCCCAGCT
1281 GTAGAGGACAGCTATCAGATGGAGTCGGGCCCTAAGAGAGTGCAGCTCATGTCTCATTCTTCATCCCTGAAGCAGACTCC
1361 TGACACTGCTGTCTTCTGGTGAGAGGCTAAGGCCTCTCAGCCTGCATCTCCCCTTCTGCCCAGTTAACACTCTCAAAGGA
1441 ATTTAATGTTGCCCACAAATCTCTCTCACCCTCAACCTAGGACATCATGCGGCCACTACTGTCACAGTCACAGCCCTAGC
1521 TCCCCTTCTTCCCTGACATGAAGTGTTCCCTTGTATGGGATGCTGGAGAGAATTCCTCGTGAGGGTTGGGTGGCCTCTGC
1601 CATGAACCTCTCATGGAGGTGCTTTTGGAGGTCCCAGCCTGGCCACCAGGAATATGGAAATTAGGCTAAAAGATGATAAT
1681 CATTGCTGCTCAGTTCTCTCAATTTTTTTTAATTGTCCTATCCATAAATCCTTTAGAAAATCCCGGTATTTCAGGATAGG
1761 AAGGTTAGGATCTTATTTATTCTCATAAGGAACCACTACCTAGTAACAGCTTCACAGGCTACAGTGGAAATCAGAAAACT
1841 TAGAAGAGTCCAGGCCCACAGGAGTAGCCTAGCACTGCCACTGGCCAGCTGCTGCTCCAGCTGTTCTGTGAGGGATCACC
1921 ACAGACAGGCCTCCTTACATGTACCCATTTTGGTGTTTATTAGCAGAAGTACCATCTGCCACCCTTACTAACTGCACATA
2001 TGAACCCCTCCACCCCTTCCTTCTCCATCAGGTCCCTCCAGAGAGGTTGCAGGAGCCCTGCAGGACATGTGCTTAATTGA
2081 GAAGGCAAGTTTGTAAGGCAGACTGTGTCTGATCTCTGCACTATAGCAAAGGCTTCTCCTCCTCAGGGAGTGATCCAGCA
2161 GCTCAAGTGGCTCTGGAGACTGTGGAGCTAAAGTTGAACCATAAATGTAGTGTTTGTGGTCTTTGTGTTAGGCAAAGTTA
2241 ATAGGGTATCTGGCATTGGGATCCTACTGACTGCCATTCAGTAAGCCAATAGTTACTAAATGCGTAACTGCCATTGCACT
2321 GTACATGTCATTCCATGACTGTCTGCATGCACATGATCCTTAAGGTAGCTGGCCCTGAGAGCTCACTGCAGGTTGGCTGA
2401 GATCATCCCTGCCTCTTCATTCCATCGTCAAGCCTCATAGCCTTCGCACCTAAGGTAAAGGTGGCCTCCCCCCAGGCCTT
2481 CCTCATTGGCCTCCTCCAGGCCTTCCTCATTGGCCTCCCTCCAGGTCTTTGAAGAAGGGTCAAAGCAAGAATATGTCGCT
2561 ATGTAGGGTATGATACCCACAGGCCTAAGTGCCAGCAGACCCCTGTGTCAGCAGTGTCTACCCCAAGTGACATCATAAAG
2641 ATGATAGTAGGAAAAGAGGGCTAGAAGCCAACCTGGGGCTCCCAGCTCTGCATGCCTTAGTAGACTCTGTCCCAGGCCCT
2721 CATTGAGTGACTGGGATTAGCAAGTACTTACGGACATTTAAGATGAAGAAGTCAGAGTGGGGTTTAGCAACTCAGCAATG
2801 CGGAGGGGCTCCTGCAATTCCTGCCAGCCTTTATTCTCCCACTTGAGAAGGCCTGAGTGTACCTCTTCCTCGCCAGTGGG
2881 CTTTAGAAGAGCACTGGAACAAGGAGAGCAGACTGGAACAAGACCACCAGTGGTGTTGGAGGTCACGCTGTGGCTGGCCG
2961 TGTCCTGTCCCATCCGTTTGGCCTCCTGGGAAGAATGTGTTGGCTCAATTTCTTTCTCAGGAGAGATGAAGTCAGTCCAG
3041 ATGGTTCTCACGTGCTACTGTCCTGCCCTCTGCTATTAACACTGGGACTGGCTTGGCACCACACCCTCCTATGTGACTGA
3121 AGCACAGACTCATTGGCCTCCCTCCAGGTCTTTGAAGAAGGGTCAAAGCAAGGATATGTCACTCCGTAGGATGTGATACC
3201 CACAGGCCTAAGTCCCACCAGACCCTATGTCAGCAGTATTGATAACAACTCTCGAGTCTGCCTCACCTCCTGCCTGCAGA
3281 GTCCAGAGTCATGGGAAAGGAGCCAGAGGGATGAGGCCGCACCACAGGCCTGTTGGGCACCCGCCGTCACTGCCAGTCTC
3361 AGAGATTCTGACTGTTCAAAGACATGTTCTTCCTGTGAACCAAGAGGACGTTCAGGGAAAAAGAAAACATGTTTTACCTA
3441 GGGATCCTTCTGAACAAAATGGCTGTCTGTACTCTTTTTAACCAGAAACTTTCCAAACTTTTTAGTGTCAAAATTGTAAC
3521 CAAGTGTCTCCTGATTCTTCCCGATGTGCTTGGCAAGTGCTGTGACCCTGTTGTAGGTATTTCTCCTCCTGCCTCTTCTG
3601 AGGGAGAAGTGATTTTAGGGGTTGATTGGAGGGAGCCGGTGTCTGTCTGGCTCCTGCCACCTCTCTTGTTTCTCTGCTTG
3681 TTGATATTGTTTGTGTGATTCAGAGAACGGGGCAGTTACATTGTGTCCATTGTTGAGAATATTAAAATATTAAAACAGTA
3761 GTTATAGAACTAAAAAATTAAAGAGCTGTGTTTTAAAAGATGCAAACCCATCAATATCATGTTAACAAAGGAATTCAAGC
3841 TATGGGCAGCCTAGCTCCTCCCCCCAGGTCGGTGTGGTGGTAGCCAGGCCAGCCCTTGGGAGACACACTCTCCACACCTG
3921 AGTTAGGTAGCTGCCTGGGAACAAGAATCTGGGGCTCAGAGACTCTCAGTTGTGTCAGGGTTTTCTCTACATCCTCAGGA
4001 CCTCTGGGTAGGGGTTTCAAAGTTGGTGACCCCAGAACCACCCTCACCCTCACATTGGATCAAGCCTTGTGTGCCTAGTG
4081 CTATATTGTAACCTGGGCTTGGGCCTGGAGCCCCTGCTTGCAAGGCCACAGGACCTCTTCCTGCCCACTTGGTGCTATCT
4161 CATCATGTCCATCTATCAGGGCAGCCTGGGCTCCTGGAGCCTGTGGGCCAGGTGCCGTGGGTGGCCCTCAAGAGCTTAGC
4241 TCTCTCTGGCTCCTGATCCTAGATTTTTTTTTCCTTTGAAGCTTTCTCTTGGCTCCAGAGATGTCAGAGTTAGGGAAGGA
4321 AATGAGCCAGGCTGAGGCGAGGAGATCCACCCCTATGCCACAGTGAGCACACCAGCCCAGCCCCTTTCCCGCCACACCAG
4401 TATTACACCCATTCTTTAAAGCATCTAGTCCCACCTGAGGCACATGCCATTCAGTGGCCCAGCTGCCCAGTGCAGACTAG
4481 AAACCTAGGCCGGGGATGGGGACGTTTCTCTGCACCCCTACTTCAGAAGAGGCATGTTGCACTTTAGTGGGGAACCCAGA
4561 ACGTTGGGCACTGGCTTCCTGTAGCTTGAGTCCCTGTAGATAGCCATGGTGGCAGCCTGATGGCTTGTGTGAAGCAGCTG
4641 CAGCTGCTGCCAGCTGTGCACATGTGTGCAGCTCCTAGAGTCAAATTGCCGGCCTGATGATGACATCACAAAGATGTGTT
4721 CTGTTCAACTTTGCCTTGGTAATTATTGTAAACACTTTGTTCAATTTTTTTTTCTTTTTTTATTCACAAACTAAATCCAT
4801 CAGGAAATTATAAACTTATTTAAAAACTG
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' uguCCGGUAGAC--ACAA-UAUAa 5'
             | :: ||||  |||| |||| 
Target 5' cttGTTTCTCTGCTTGTTGATATt 3'
3665 - 3688 124.00 -5.40
2
miRNA  3' ugucCGGUAGACACAAUAUAa 5'
              |||  : ||| ||||| 
Target 5' gtgtGCC--TAGTGCTATATt 3'
4069 - 4087 121.00 -7.50
3
miRNA  3' ugUCCG-GU-----AGACACAAUAUAa 5'
            :||| ||     |||  |||:|:| 
Target 5' tgGGGCTCAGAGACTCTCAGTTGTGTc 3'
3950 - 3976 119.00 -9.24
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Brain (Mouse neocortex)
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in Chi_BrainB_130_50. RNA binding protein: AGO. Condition:Brain B 2A8 P13 130 KD ...

- Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' uguccgGUAGACACA-AUAUAa 5'
                ::| ||||| |:|:| 
Target 5' ugugugUGUGUGUGUGUGUGUg 3'
14 - 35
Article - Chi SW; Zang JB; Mele A; Darnell RB
- Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Liver
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in ERR266287. RNA binding protein: AGO2. Condition:B_Liver partial hapatectomy 36h HITS-CLIP data was present in ERR266292. RNA binding protein: AGO2. Condition:B_Liver partial hapatectomy 48h HITS-CLIP data was present in ERR266295. RNA binding protein: AGO2. Condition:B_Liver partial hapatectomy 1h ...

- Schug J; McKenna LB; Walton G; Hand N; et al., 2013, BMC genomics.

Article - Schug J; McKenna LB; Walton G; Hand N; et al.
- BMC genomics, 2013
BACKGROUND: Validation of physiologic miRNA targets has been met with significant challenges. We employed HITS-CLIP to identify which miRNAs participate in liver regeneration, and to identify their target mRNAs. RESULTS: miRNA recruitment to the RISC is highly dynamic, changing more than five-fold for several miRNAs. miRNA recruitment to the RISC did not correlate with changes in overall miRNA expression for these dynamically recruited miRNAs, emphasizing the necessity to determine miRNA recruitment to the RISC in order to fully assess the impact of miRNA regulation. We incorporated RNA-seq quantification of total mRNA to identify expression-weighted Ago footprints, and developed a microRNA regulatory element (MRE) prediction algorithm that represents a greater than 20-fold refinement over computational methods alone. These high confidence MREs were used to generate candidate 'competing endogenous RNA' (ceRNA) networks. CONCLUSION: HITS-CLIP analysis provide novel insights into global miRNA:mRNA relationships in the regenerating liver.
LinkOut: [PMID: 23597149]
Experimental Support 3 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions C2C12
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1385343. RNA binding protein: 聽AGO2. Condition:C2C12_DM_Ago2_CLIP-Seq_myotubes ...

- Zhang X; Zuo X; Yang B; Li Z; Xue Y; Zhou et al., 2014, Cell.

Article - Zhang X; Zuo X; Yang B; Li Z; Xue Y; Zhou et al.
- Cell, 2014
MicroRNAs are well known to mediate translational repression and mRNA degradation in the cytoplasm. Various microRNAs have also been detected in membrane-compartmentalized organelles, but the functional significance has remained elusive. Here, we report that miR-1, a microRNA specifically induced during myogenesis, efficiently enters the mitochondria where it unexpectedly stimulates, rather than represses, the translation of specific mitochondrial genome-encoded transcripts. We show that this positive effect requires specific miR:mRNA base-pairing and Ago2, but not its functional partner GW182, which is excluded from the mitochondria. We provide evidence for the direct action of Ago2 in mitochondrial translation by crosslinking immunoprecipitation coupled with deep sequencing (CLIP-seq), functional rescue with mitochondria-targeted Ago2, and selective inhibition of the microRNA machinery in the cytoplasm. These findings unveil a positive function of microRNA in mitochondrial translation and suggest a highly coordinated myogenic program via miR-1-mediated translational stimulation in the mitochondria and repression in the cytoplasm.
LinkOut: [PMID: 25083871]
154 mmu-miR-410-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT411453 Timp3 tissue inhibitor of metalloproteinase 3 1 1
MIRT429039 Nfib nuclear factor I/B 1 1
MIRT577363 Zbed6 zinc finger, BED type containing 6 1 1
MIRT577415 Ugt2b35 UDP glucuronosyltransferase 2 family, polypeptide B35 1 1
MIRT577447 Ttc17 tetratricopeptide repeat domain 17 1 1
MIRT577509 Tmem100 transmembrane protein 100 1 1
MIRT577583 Tcf21 transcription factor 21 1 1
MIRT577727 Slc12a8 solute carrier family 12 (potassium/chloride transporters), member 8 1 1
MIRT577749 Shh sonic hedgehog 1 1
MIRT577866 Rassf5 Ras association (RalGDS/AF-6) domain family member 5 1 1
MIRT577939 Ppp6r1 protein phosphatase 6, regulatory subunit 1 1 1
MIRT577946 Pou4f2 POU domain, class 4, transcription factor 2 1 1
MIRT577955 Pm20d2 peptidase M20 domain containing 2 1 1
MIRT578018 Pfkl phosphofructokinase, liver, B-type 1 2
MIRT578052 Pcdhb17 protocadherin beta 17 1 1
MIRT578199 Nadsyn1 NAD synthetase 1 1 1
MIRT578517 Igfbp3 insulin-like growth factor binding protein 3 1 1
MIRT578557 Hopx HOP homeobox 1 1
MIRT578586 Hist1h1d histone cluster 1, H1d 1 1
MIRT578724 Gm8369 predicted gene 8369 1 1
MIRT578808 Folh1 folate hydrolase 1 1 1
MIRT578868 Fam151b family with sequence similarity 151, member B 1 1
MIRT579020 Ctxn3 cortexin 3 1 1
MIRT579049 Crp C-reactive protein, pentraxin-related 1 1
MIRT579405 Akna AT-hook transcription factor 1 1
MIRT579630 Mettl20 electron transfer flavoprotein beta subunit lysine methyltransferase 1 1
MIRT579670 1200011I18Rik GPALPP motifs containing 1 1 1
MIRT579703 Zmynd8 zinc finger, MYND-type containing 8 1 1
MIRT579745 Zfp644 zinc finger protein 644 1 1
MIRT579786 Zfp384 zinc finger protein 384 1 1
MIRT579807 Zfp148 zinc finger protein 148 1 1
MIRT579834 Zfand5 zinc finger, AN1-type domain 5 1 1
MIRT579839 Zer1 zyg-11 related, cell cycle regulator 1 1
MIRT579858 Zc3hav1l zinc finger CCCH-type, antiviral 1-like 1 1
MIRT579995 Wnt3 wingless-type MMTV integration site family, member 3 1 1
MIRT580002 Wnt11 wingless-type MMTV integration site family, member 11 1 1
MIRT580021 Whsc1l1 nuclear receptor binding SET domain protein 3 1 1
MIRT580090 Usp6nl USP6 N-terminal like 1 1
MIRT580211 Ttc39b tetratricopeptide repeat domain 39B 1 1
MIRT580239 Trps1 transcriptional repressor GATA binding 1 1 1
MIRT580243 Trpc7 transient receptor potential cation channel, subfamily C, member 7 1 1
MIRT580411 Tmem161b transmembrane protein 161B 1 1
MIRT580506 Tfam transcription factor A, mitochondrial 1 1
MIRT580533 Tead3 TEA domain family member 3 1 1
MIRT580554 Tcf7l2 transcription factor 7 like 2, T cell specific, HMG box 1 1
MIRT580568 Tbx4 T-box 4 1 1
MIRT580612 Syp synaptophysin 1 1
MIRT580665 Strbp spermatid perinuclear RNA binding protein 1 1
MIRT580793 Snx27 sorting nexin family member 27 1 1
MIRT580819 Smurf2 SMAD specific E3 ubiquitin protein ligase 2 1 1
MIRT580868 Slc8a1 solute carrier family 8 (sodium/calcium exchanger), member 1 1 1
MIRT580880 Slc7a11 solute carrier family 7 (cationic amino acid transporter, y+ system), member 11 1 1
MIRT580920 Slc35a1 solute carrier family 35 (CMP-sialic acid transporter), member 1 1 1
MIRT581144 Senp3 SUMO/sentrin specific peptidase 3 1 1
MIRT581245 Rufy2 RUN and FYVE domain-containing 2 1 1
MIRT581261 Rragb Ras-related GTP binding B 1 1
MIRT581293 Rnf166 ring finger protein 166 1 1
MIRT581352 Ret ret proto-oncogene 1 1
MIRT581388 Rbms3 RNA binding motif, single stranded interacting protein 1 1
MIRT581422 Rasal2 RAS protein activator like 2 1 1
MIRT581453 Ranbp10 RAN binding protein 10 1 1
MIRT581541 Pten phosphatase and tensin homolog 1 1
MIRT581573 Prrx1 paired related homeobox 1 1 1
MIRT581589 Lzts3 leucine zipper, putative tumor suppressor family member 3 1 1
MIRT581665 Ppp4r2 protein phosphatase 4, regulatory subunit 2 1 1
MIRT581738 Plxnc1 plexin C1 1 1
MIRT581791 Plaur plasminogen activator, urokinase receptor 1 1
MIRT581820 Pkib protein kinase inhibitor beta, cAMP dependent, testis specific 1 1
MIRT581893 Phf17 jade family PHD finger 1 1 1
MIRT581982 Pcsk5 proprotein convertase subtilisin/kexin type 5 1 1
MIRT582003 Pcdh20 protocadherin 20 1 1
MIRT582052 Osbp oxysterol binding protein 1 1
MIRT582100 Nupl2 nucleoporin like 2 1 1
MIRT582149 Nol7 nucleolar protein 7 1 1
MIRT582156 Nln neurolysin (metallopeptidase M3 family) 1 1
MIRT582256 Nckap5l NCK-associated protein 5-like 1 1
MIRT582373 Map1a microtubule-associated protein 1 A 1 1
MIRT582410 Mpped2 metallophosphoesterase domain containing 2 1 1
MIRT582442 Mgea5 meningioma expressed antigen 5 (hyaluronidase) 1 1
MIRT582587 Lrrtm2 leucine rich repeat transmembrane neuronal 2 1 1
MIRT582671 Lin54 lin-54 homolog (C. elegans) 1 1
MIRT582719 Larp1 La ribonucleoprotein domain family, member 1 1 1
MIRT582727 L3mbtl4 l(3)mbt-like 4 (Drosophila) 1 2
MIRT582764 Klf12 Kruppel-like factor 12 1 1
MIRT582858 Ism1 isthmin 1, angiogenesis inhibitor 1 1
MIRT582943 Ikzf5 IKAROS family zinc finger 5 1 1
MIRT582999 Id2 inhibitor of DNA binding 2 1 1
MIRT583061 Hoxa11 homeobox A11 1 1
MIRT583100 Hiat1 major facilitator superfamily domain containing 14A 1 1
MIRT583108 Hexim1 hexamethylene bis-acetamide inducible 1 1 1
MIRT583136 Has2 hyaluronan synthase 2 1 1
MIRT583187 Grhl3 grainyhead-like 3 (Drosophila) 1 1
MIRT583231 Gpc6 glypican 6 1 1
MIRT583391 Fzd5 frizzled class receptor 5 1 1
MIRT583411 Fzd1 frizzled class receptor 1 1 1
MIRT583425 Fsd1l fibronectin type III and SPRY domain containing 1-like 1 1
MIRT583527 Fgf16 fibroblast growth factor 16 1 1
MIRT583544 Fbxl20 F-box and leucine-rich repeat protein 20 1 1
MIRT583611 Fam46a family with sequence similarity 46, member A 1 1
MIRT583738 Erc1 ELKS/RAB6-interacting/CAST family member 1 1 3
MIRT583770 Ep300 E1A binding protein p300 1 1
MIRT583797 Elavl4 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D) 1 1
MIRT583817 Eif2s1 eukaryotic translation initiation factor 2, subunit 1 alpha 1 1
MIRT583953 Dlx3 distal-less homeobox 3 1 1
MIRT584138 Crebzf CREB/ATF bZIP transcription factor 1 1
MIRT584210 Cops7b COP9 signalosome subunit 7B 1 1
MIRT584435 Ccdc90b coiled-coil domain containing 90B 1 1
MIRT584453 Cbx3 chromobox 3 1 1
MIRT584467 Casc4 cancer susceptibility candidate 4 1 1
MIRT584506 Calm1 calmodulin 1 1 1
MIRT584735 Atp2b2 ATPase, Ca++ transporting, plasma membrane 2 1 1
MIRT584809 Arl15 ADP-ribosylation factor-like 15 1 1
MIRT584849 Arhgap11a Rho GTPase activating protein 11A 1 1
MIRT584997 Ndnf neuron-derived neurotrophic factor 1 1
MIRT585041 Lrrc71 leucine rich repeat containing 71 1 1
MIRT585730 Synpr synaptoporin 1 1
MIRT585764 Sri sorcin 1 1
MIRT586097 Reep5 receptor accessory protein 5 1 1
MIRT586120 Rccd1 RCC1 domain containing 1 1 1
MIRT587442 Dimt1 DIM1 dimethyladenosine transferase 1-like (S. cerevisiae) 1 1
MIRT587533 Cxxc5 CXXC finger 5 1 1
MIRT588362 Zfp518b zinc finger protein 518B 1 1
MIRT588472 Wwtr1 WW domain containing transcription regulator 1 1 1
MIRT588619 Trak2 trafficking protein, kinesin binding 2 1 1
MIRT588696 Tet2 tet methylcytosine dioxygenase 2 1 1
MIRT588844 Sort1 sortilin 1 1 1
MIRT588974 Runx1t1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related) 1 1
MIRT589264 Plau plasminogen activator, urokinase 1 1
MIRT589381 Ntrk3 neurotrophic tyrosine kinase, receptor, type 3 1 1
MIRT589449 Nck2 non-catalytic region of tyrosine kinase adaptor protein 2 1 1
MIRT589536 Mllt3 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3 1 1
MIRT590500 Cacnb2 calcium channel, voltage-dependent, beta 2 subunit 1 1
MIRT590676 Anln anillin, actin binding protein 1 3
MIRT590761 Acbd5 acyl-Coenzyme A binding domain containing 5 1 1
MIRT590795 4921524J17Rik RIKEN cDNA 4921524J17 gene 1 1
MIRT593050 Nf2 neurofibromin 2 1 1
MIRT594246 Sox11 SRY (sex determining region Y)-box 11 1 1
MIRT594396 Ints6 integrator complex subunit 6 1 1
MIRT594712 Zwint ZW10 interactor 1 1
MIRT594774 Tex12 testis expressed gene 12 1 1
MIRT594790 Slitrk2 SLIT and NTRK-like family, member 2 1 1
MIRT595122 Mex3b mex3 RNA binding family member B 1 1
MIRT595538 Etv3 ets variant 3 1 1
MIRT595682 Rnf6 ring finger protein (C3H2C3 type) 6 1 1
MIRT595833 Tmem56 transmembrane protein 56 1 1
MIRT595896 Cd69 CD69 antigen 1 1
MIRT595962 Znrf1 zinc and ring finger 1 1 1
MIRT595979 Ocrl OCRL, inositol polyphosphate-5-phosphatase 1 1
MIRT596009 Ceacam1 carcinoembryonic antigen-related cell adhesion molecule 1 1 1
MIRT596190 Lrig2 leucine-rich repeats and immunoglobulin-like domains 2 1 1
MIRT603671 Olr1 oxidized low density lipoprotein (lectin-like) receptor 1 1 1
MIRT735076 Hmgb1 high mobility group box 1 3 0
MIRT755744 Nos2 nitric oxide synthase 2, inducible 1 1
MIRT755745 Slc7a1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 1 1
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-410 Reversine NULL 210332 Microarray C2C12 myoblast cells 24513286 2014 up-regulated
miR-410 5-Fluorouracil approved 3385 Microarray CNE cells 22614822 2012 up-regulated

Error report submission