pre-miRNA Information | |
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pre-miRNA | hsa-mir-6501 |
Genomic Coordinates | chr21: 33550662 - 33550728 |
Description | Homo sapiens miR-6501 stem-loop |
Comment | None |
RNA Secondary Structure | ![]() |
Mature miRNA Information | ||||||||||||||||
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Mature miRNA | hsa-miR-6501-5p | |||||||||||||||
Sequence | 3| AGUUGCCAGGGCUGCCUUUGGU |24 | |||||||||||||||
Evidence | Experimental | |||||||||||||||
Experiments | Illumina | DRVs in miRNA |
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SNPs in miRNA |
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Putative Targets |
miRNA Expression profile | |
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Human miRNA Tissue Atlas | |
Circulating MicroRNA Expression Profiling |
Gene Information | |||||||||||||||||||||
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Gene Symbol | TIPRL | ||||||||||||||||||||
Synonyms | TIP, TIP41, TIPRL1 | ||||||||||||||||||||
Description | TOR signaling pathway regulator | ||||||||||||||||||||
Transcript | NM_152902 | ||||||||||||||||||||
Other Transcripts | NM_001031800 | ||||||||||||||||||||
Expression | |||||||||||||||||||||
Putative miRNA Targets on TIPRL | |||||||||||||||||||||
3'UTR of TIPRL (miRNA target sites are highlighted) |
>TIPRL|NM_152902|3'UTR 1 AATGTGATACAACATATACTCACTATGGAATCTGACTGGACACCTTGGCTATTTGTAAGGGGTTATTTTTATTATGAGAA 81 TTAATTGCCTTGTTTATGTACAGATTTTCTGTAGCCTTAAAGGAAAAAAAAATAAAGATCGTTACAGGCAGGTTTCACTC 161 AACTGCTGTTTGTACTGTCTGTCTTCACATTCATATTCCAGATTTATATTTTCTGGAGTTAAATTTGGATGATTTCTAAA 241 TTATCACAAAGTGGGACCTCAGCAGTAGTGATGTGTGTGTCTCATGAGCAGTGAGCACAGTCTGCATTCATCATGAAACA 321 CTATCTTCTACCAGGAGGAGGTTAATGTAAATCACCAAATCCCAATGCCTTGTGACTTTCATAGGATTCCTGATCATGCA 401 TGTTGATGTACTGGCTCTTCACTTTGGGCTTTCTGATGTTTATTCACACCTTTGGAGAGTTGCAACTTGCCACATACGAA 481 ATTAGTCTCATAGTGTAGTGAACTTCAACCCCAAAATTTTAAAAATGTATTTCCCCCCAGTTTTAAATTGCCTTTGAAAT 561 TTAAAAAAAAAAAATTTAGACTTAGTACCAGAACCAAAAATACCTAGATTTTTGGAGAACTTATTACATACATAGAAACA 641 TGAATATGGTTTACCACTGTGTGTGTGTAGGATGTTAGAATTATCTGTCCTCCATCTTTAGGTGCTTTTTCTTAAATGTG 721 GTTCTACTTATACTGATATTTTTAATTTCCATCTTCCATGCAACCTCAGAGTGAATAAACCCCTTAAATTTGGTGCTGGT 801 TCGAAAAAGTCTAAAGGGTTTATTAGGGGTTGTTTTTCGCAAATATTACATCAATCCTTAAAGCAACAAGATTAATTTTC 881 TGCTTAAAATATTTGGGAAGATAGGTAAGGAGGAGGGGGTTTTAAAATATAAAAGCAAGTTTTTCTATTTTAAGGTGCAT 961 ATTTGTAACATTACAGGGGATGAAGTAAAATGTAATTAATTAGCACAAGACTTAGGGAGTACAGAAAATACACAGAAGTA 1041 AATTTCAAATCCATTTGATTGTTTTCATAGTGACCCCTTAGTCATTTTATATTCTTGTCTGCCTTTCTAGAAAAATGGTT 1121 GTCATAAAGTGGAAAGTGATTAAAAAGCATCAAATAAGAAATTATTTCAAGTGGATTTTTAAAAATATTTTTTTGAAGGG 1201 CAGGGGGAAAATTCACCCCTTTTCTGATTTGAAATATGTTGTACATATTTCCATTTGATGGATAAATCATTAAGTAAGAA 1281 TATTTGATTTAAAGTATTAGCCAACCTCTTCAGGTATTAGCCTGAAGATAAATTTTAACAAAACATATACACTTGGGTAT 1361 CCGTCATTGCTCAAACTCTATAGTGTATTGCTGGAGCCAATAGGCAGGGTATATTTTATTAGCTAAATTTGATATTTGTC 1441 TTCTGCCTTCTGTATCACCTCCAAGCTATAGGAAATCAGGATTTTGTTGGCTTTAAGAAAACACATGGTATGTTCACTGT 1521 ATATTAAATATACCTGTATTTAATGTTTTCTCTTAGGACAGAAAAGTAGACACACACACACACACACACACACATGTTGT 1601 GTTCAGCTTTCTGTTTTATATTATTTGCCATTGAGATTAGAATAGAACAGGCTCTATTCATGCAAACTATATGAAATGAA 1681 AAACTTTTAAGACTCTTCATTAATTGGAGCTTCTGGGCAACATCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 1761 ATACAGACATTTTTTTTTTAACTTGTTGATTCAGATGTCTTGGTCCCTGAATAGTCCTAGATTACTTATTTTGAGAATTC 1841 ATTGTTAAAAATTACAGGGAATTAAAATAATTGCCTTTTTTTTTTTTAGAGGGTAAGAGATGGGTAGAAGAGTATGCCTC 1921 TGAAAATTTTATTAGTTTATTCTTGTGGAGAATACCAAGAAAATGTGTATTTGCCCATTGCTAAATATGATATATGCCAT 2001 TTTGTATTTATTTGTCCCAAGTGTCTTTTTGTAAGAGGAGAATAAACAATAAGGAATTACTGATCAAA Target sites
Provided by authors
Predicted by miRanda
DRVs
SNPs
DRVs & SNPs
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miRNA-target interactions (Predicted by miRanda) |
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DRVs in gene 3'UTRs | |||||||||||||||||||||
SNPs in gene 3'UTRs |
Experimental Support 1 for Functional miRNA-Target Interaction | |
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miRNA:Target | ---- |
Validation Method |
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Conditions | HeLa |
Location of target site | 3'UTR |
Tools used in this research | TargetScan , miRTarCLIP , Piranha |
Original Description (Extracted from the article) |
...
HITS-CLIP data was present in Chi_124A_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell miR-124 + A
HITS-CLIP data was present in Chi_ControlB_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell Control B
... - Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature. |
Article |
- Chi SW; Zang JB; Mele A; Darnell RB - Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
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Experimental Support 2 for Functional miRNA-Target Interaction | |
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miRNA:Target | ---- |
Validation Method |
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Conditions | BCBL-1 |
Location of target site | 3'UTR |
Tools used in this research | TargetScan , miRTarCLIP , Piranha |
Original Description (Extracted from the article) |
...
HITS-CLIP data was present in GSM1015448. RNA binding protein: AGO2. Condition:BCBL-1 mRNA
... - Haecker I; Gay LA; Yang Y; Hu J; Morse AM; et al., 2012, PLoS pathogens. |
Article |
- Haecker I; Gay LA; Yang Y; Hu J; Morse AM; et al. - PLoS pathogens, 2012
KSHV is the etiological agent of Kaposi's sarcoma (KS), primary effusion lymphoma (PEL), and a subset of multicentricCastleman's disease (MCD). The fact that KSHV-encoded miRNAs are readily detectable in all KSHV-associated tumors suggests a potential role in viral pathogenesis and tumorigenesis. MiRNA-mediated regulation of gene expression is a complex network with each miRNA having many potential targets, and to date only few KSHV miRNA targets have been experimentally determined. A detailed understanding of KSHV miRNA functions requires high-through putribonomics to globally analyze putative miRNA targets in a cell type-specific manner. We performed Ago HITS-CLIP to identify viral and cellular miRNAs and their cognate targets in two latently KSHV-infected PEL cell lines. Ago HITS-CLIP recovered 1170 and 950 cellular KSHV miRNA targets from BCBL-1 and BC-3, respectively. Importantly, enriched clusters contained KSHV miRNA seed matches in the 3'UTRs of numerous well characterized targets, among them THBS1, BACH1, and C/EBPbeta. KSHV miRNA targets were strongly enriched for genes involved in multiple pathways central for KSHV biology, such as apoptosis, cell cycle regulation, lymphocyte proliferation, and immune evasion, thus further supporting a role in KSHV pathogenesis and potentially tumorigenesis. A limited number of viral transcripts were also enriched by HITS-CLIP including vIL-6 expressed only in a subset of PEL cells during latency. Interestingly, Ago HITS-CLIP revealed extremely high levels of Ago-associated KSHV miRNAs especially in BC-3 cells where more than 70% of all miRNAs are of viral origin. This suggests that in addition to seed match-specific targeting of cellular genes, KSHV miRNAs may also function by hijacking RISCs, thereby contributing to a global de-repression of cellular gene expression due to the loss of regulation by human miRNAs. In summary, we provide an extensive list of cellular and viral miRNA targets representing an important resource to decipher KSHV miRNA function.
LinkOut: [PMID: 22927820]
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Experimental Support 3 for Functional miRNA-Target Interaction | |
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miRNA:Target | ---- |
Validation Method |
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Conditions | Hela |
Location of target site | 3'UTR |
Tools used in this research | TargetScan , miRTarCLIP , Piranha |
Original Description (Extracted from the article) |
...
HITS-CLIP data was present in GSM1048187. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_control
... - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell. |
Article |
- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al. - Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
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Experimental Support 4 for Functional miRNA-Target Interaction | |
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miRNA:Target | ---- |
Validation Method |
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Conditions | HEK293S |
Location of target site | 3'UTR |
Tools used in this research | TargetScan , miRTarCLIP , Piranha |
Original Description (Extracted from the article) |
...
HITS-CLIP data was present in GSM1084040. RNA binding protein: AGO2. Condition:CLIP_noarsenite_rep1
HITS-CLIP data was present in GSM1084041. RNA binding protein: AGO2. Condition:CLIP_arsenite_rep1
HITS-CLIP data was present in GSM1084042. RNA binding protein: AGO2. Condition:CLIP_noarsenite_rep2
HITS-CLIP data was present in GSM1084043. RNA binding protein: AGO2. Condition:CLIP_arsenite_rep2
HITS-CLIP data was present in GSM1084044. RNA binding protein: AGO2. Condition:CLIP_noarsenite_rep3
HITS-CLIP data was present in GSM1084045. RNA binding protein: AGO2. Condition:CLIP_arsenite_rep3
HITS-CLIP data was present in GSM1084046. RNA binding protein: AGO2. Condition:CLIP_noarsenite_rep4
HITS-CLIP data was present in GSM1084047. RNA binding protein: AGO2. Condition:CLIP_arsenite_rep4
HITS-CLIP data was present in GSM1084064. RNA binding protein: AGO2. Condition:CLIP_noemetine_AbnovaAb
HITS-CLIP data was present in GSM1084065. RNA binding protein: AGO2. Condition:CLIP_emetine_AbnovaAb
HITS-CLIP data was present in GSM1084066. RNA binding protein: AGO2. Condition:CLIP_noemetine_SantaCruzAb
HITS-CLIP data was present in GSM1084067. RNA binding protein: AGO2. Condition:CLIP_emetine_SantaCruzAb
HITS-CLIP data was present in GSM1084068. RNA binding protein: AGO2. Condition:CLIP_noemetine_SigmaAb
HITS-CLIP data was present in GSM1084069. RNA binding protein: AGO2. Condition:CLIP_emetine_SigmaAb
HITS-CLIP data was present in GSM1084072. RNA binding protein: AGO2. Condition:CLIP_nohippuristanol_rep1_AbnovaAb
HITS-CLIP data was present in GSM1084073. RNA binding protein: AGO2. Condition:CLIP_hippuristanol_rep1_AbnovaAb
HITS-CLIP data was present in GSM1084074. RNA binding protein: AGO2. Condition:CLIP_nohippuristanol_rep1_SantaCruzAb
HITS-CLIP data was present in GSM1084075. RNA binding protein: AGO2. Condition:CLIP_hippuristanol_rep1_SantaCruzAb
HITS-CLIP data was present in GSM1084076. RNA binding protein: AGO2. Condition:CLIP_nohippuristanol_rep1_SigmaAb
HITS-CLIP data was present in GSM1084077. RNA binding protein: AGO2. Condition:CLIP_hippuristanol_rep1_SigmaAb
HITS-CLIP data was present in GSM1084078. RNA binding protein: AGO2. Condition:CLIP_nohippuristanol_rep2_AbnovaAb
HITS-CLIP data was present in GSM1084079. RNA binding protein: AGO2. Condition:CLIP_hippuristanol_rep2_AbnovaAb
HITS-CLIP data was present in GSM1084080. RNA binding protein: AGO2. Condition:CLIP_nohippuristanol_rep2_SantaCruzAb
HITS-CLIP data was present in GSM1084081. RNA binding protein: AGO2. Condition:CLIP_hippuristanol_rep2_SantaCruzAb
HITS-CLIP data was present in GSM1084082. RNA binding protein: AGO2. Condition:CLIP_nohippuristanol_rep2_SigmaAb
HITS-CLIP data was present in GSM1084083. RNA binding protein: AGO2. Condition:CLIP_hippuristanol_rep2_SigmaAb
... - Karginov FV; Hannon GJ, 2013, Genes & development. |
Article |
- Karginov FV; Hannon GJ - Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
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Experimental Support 5 for Functional miRNA-Target Interaction | |
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miRNA:Target | ---- |
Validation Method |
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Conditions | Liver Tissue |
Location of target site | 3'UTR |
Tools used in this research | TargetScan , miRTarCLIP , Piranha |
Original Description (Extracted from the article) |
...
HITS-CLIP data was present in GSM2550620. RNA binding protein: AGO2. Condition:Patient 2 Tumor 1
HITS-CLIP data was present in GSM2550619. RNA binding protein: AGO2. Condition:Patient 1 Tumor 2
HITS-CLIP data was present in GSM2550618. RNA binding protein: AGO2. Condition:Patient 1 Tumor 1
... - Luna JM; Barajas JM; Teng KY; Sun HL; Moore et al., 2017, Molecular cell. |
Article |
- Luna JM; Barajas JM; Teng KY; Sun HL; Moore et al. - Molecular cell, 2017
MicroRNA-122, an abundant and conserved liver-specific miRNA, regulates hepatic metabolism and functions as a tumor suppressor, yet systematic and direct biochemical elucidation of the miR-122 target network remains incomplete. To this end, we performed Argonaute crosslinking immunoprecipitation (Argonaute [Ago]-CLIP) sequencing in miR-122 knockout and control mouse livers, as well as in matched human hepatocellular carcinoma (HCC) and benign liver tissue to identify miRNA target sites transcriptome-wide in two species. We observed a majority of miR-122 binding on 3' UTRs and coding exons followed by extensive binding to other genic and non-genic sites. Motif analysis of miR-122-dependent binding revealed a G-bulged motif in addition to canonical motifs. A large number of miR-122 targets were found to be species specific. Upregulation of several common mouse and human targets, most notably BCL9, predicted survival in HCC patients. These results broadly define the molecular consequences of miR-122 downregulation in hepatocellular carcinoma.
LinkOut: [PMID: 28735896]
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CLIP-seq Support 1 for dataset Chi_124A_2A8_130_50 | |
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Method / RBP | HITS-CLIP / AGO |
Cell line / Condition | HeLa / HeLa cell miR-124 + A |
Location of target site | ENST00000367833.2 | 3UTR | AUUGGAGCUUCUGGG |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 19536157 / Chi_HITSCLIP |
CLIP-seq Viewer | Link |
CLIP-seq Support 2 for dataset Chi_ControlB_2A8_130_50 | |
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Method / RBP | HITS-CLIP / AGO |
Cell line / Condition | HeLa / HeLa cell Control B |
Location of target site | ENST00000367833.2 | 3UTR | ACAUCGUGUGUGUGUGUGUGUGUGU |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 19536157 / Chi_HITSCLIP |
CLIP-seq Viewer | Link |
CLIP-seq Support 3 for dataset GSM1015448 | |
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Method / RBP | HITS-CLIP / AGO2 |
Cell line / Condition | BCBL-1 / BCBL-1 mRNA |
Location of target site | ENST00000367833.2 | 3UTR | CAUCGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGU |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 22927820 / GSE41357 |
CLIP-seq Viewer | Link |
CLIP-seq Support 4 for dataset GSM1048187 | |
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Method / RBP | HITS-CLIP / AGO2 |
Cell line / Condition | Hela / Hela_AGO2_CLIP_control |
Location of target site | ENST00000367833.2 | 3UTR | ACAUCGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUG |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 23313552 / GSE42701 |
CLIP-seq Viewer | Link |
CLIP-seq Support 5 for dataset GSM1084040 | |
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Method / RBP | HITS-CLIP / AGO2 |
Cell line / Condition | HEK293S / CLIP_noarsenite_rep1 |
Location of target site | ENST00000367833.2 | 3UTR | AACAUCGUGUGUGUGUGUGUGUGUGUGUGUGUGUGU |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 23824327 / GSE44404 |
CLIP-seq Viewer | Link |
CLIP-seq Support 6 for dataset GSM1084041 | |
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Method / RBP | HITS-CLIP / AGO2 |
Cell line / Condition | HEK293S / CLIP_arsenite_rep1 |
Location of target site | ENST00000367833.2 | 3UTR | ACAUCGUGUGUGUGUGUGUGUGUGUGUGUGUGUGU |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 23824327 / GSE44404 |
CLIP-seq Viewer | Link |
CLIP-seq Support 7 for dataset GSM1084042 | |
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Method / RBP | HITS-CLIP / AGO2 |
Cell line / Condition | HEK293S / CLIP_noarsenite_rep2 |
Location of target site | ENST00000367833.2 | 3UTR | ACAUCGUGUGUGUGUGUGUGUGUGUGUGUGUGUGU |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 23824327 / GSE44404 |
CLIP-seq Viewer | Link |
CLIP-seq Support 8 for dataset GSM1084043 | |
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Method / RBP | HITS-CLIP / AGO2 |
Cell line / Condition | HEK293S / CLIP_arsenite_rep2 |
Location of target site | ENST00000367833.2 | 3UTR | AACAUCGUGUGUGUGUGUGUGUGUGUGUGUGUGUGU |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 23824327 / GSE44404 |
CLIP-seq Viewer | Link |
CLIP-seq Support 9 for dataset GSM1084044 | |
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Method / RBP | HITS-CLIP / AGO2 |
Cell line / Condition | HEK293S / CLIP_noarsenite_rep3 |
Location of target site | ENST00000367833.2 | 3UTR | ACAUCGUGUGUGUGUGUGUGUGUGUGUGUGUGUGU |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 23824327 / GSE44404 |
CLIP-seq Viewer | Link |
CLIP-seq Support 10 for dataset GSM1084045 | |
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Method / RBP | HITS-CLIP / AGO2 |
Cell line / Condition | HEK293S / CLIP_arsenite_rep3 |
Location of target site | ENST00000367833.2 | 3UTR | ACAUCGUGUGUGUGUGUGUGUGUGUGUGUGUGUGU |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 23824327 / GSE44404 |
CLIP-seq Viewer | Link |
CLIP-seq Support 11 for dataset GSM1084046 | |
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Method / RBP | HITS-CLIP / AGO2 |
Cell line / Condition | HEK293S / CLIP_noarsenite_rep4 |
Location of target site | ENST00000367833.2 | 3UTR | ACAUCGUGUGUGUGUGUGUGUGUGUGUGUGUGUGU |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 23824327 / GSE44404 |
CLIP-seq Viewer | Link |
CLIP-seq Support 12 for dataset GSM1084047 | |
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Method / RBP | HITS-CLIP / AGO2 |
Cell line / Condition | HEK293S / CLIP_arsenite_rep4 |
Location of target site | ENST00000367833.2 | 3UTR | ACAUCGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUAUAC |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 23824327 / GSE44404 |
CLIP-seq Viewer | Link |
CLIP-seq Support 13 for dataset GSM1084064 | |
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Method / RBP | HITS-CLIP / AGO2 |
Cell line / Condition | HEK293S / CLIP_noemetine_AbnovaAb |
Location of target site | ENST00000367833.2 | 3UTR | ACAUCGUGUGUGUGUGUGUGUGUGUGUGUGUGUGU |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 23824327 / GSE44404 |
CLIP-seq Viewer | Link |
CLIP-seq Support 14 for dataset GSM1084065 | |
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Method / RBP | HITS-CLIP / AGO2 |
Cell line / Condition | HEK293S / CLIP_emetine_AbnovaAb |
Location of target site | ENST00000367833.2 | 3UTR | AACAUCGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUG |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 23824327 / GSE44404 |
CLIP-seq Viewer | Link |
CLIP-seq Support 15 for dataset GSM1084066 | |
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Method / RBP | HITS-CLIP / AGO2 |
Cell line / Condition | HEK293S / CLIP_noemetine_SantaCruzAb |
Location of target site | ENST00000367833.2 | 3UTR | ACAUCGUGUGUGUGUGUGUGUGUGUGUGUGUGU |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 23824327 / GSE44404 |
CLIP-seq Viewer | Link |
CLIP-seq Support 16 for dataset GSM1084067 | |
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Method / RBP | HITS-CLIP / AGO2 |
Cell line / Condition | HEK293S / CLIP_emetine_SantaCruzAb |
Location of target site | ENST00000367833.2 | 3UTR | ACAUCGUGUGUGUGUGUGUGUGUGUGUGUGUGU |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 23824327 / GSE44404 |
CLIP-seq Viewer | Link |
CLIP-seq Support 17 for dataset GSM1084068 | |
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Method / RBP | HITS-CLIP / AGO2 |
Cell line / Condition | HEK293S / CLIP_noemetine_SigmaAb |
Location of target site | ENST00000367833.2 | 3UTR | AUUGGAGCUUCUGGGCAACAUCGUGUGUGUGUGUGUGUGUGUGUGUGUGUGU |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 23824327 / GSE44404 |
CLIP-seq Viewer | Link |
CLIP-seq Support 18 for dataset GSM1084069 | |
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Method / RBP | HITS-CLIP / AGO2 |
Cell line / Condition | HEK293S / CLIP_emetine_SigmaAb |
Location of target site | ENST00000367833.2 | 3UTR | AACAUCGUGUGUGUGUGUGUGUGUGUGUGUGUGU |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 23824327 / GSE44404 |
CLIP-seq Viewer | Link |
CLIP-seq Support 19 for dataset GSM1084072 | |
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Method / RBP | HITS-CLIP / AGO2 |
Cell line / Condition | HEK293S / CLIP_nohippuristanol_rep1_AbnovaAb |
Location of target site | ENST00000367833.2 | 3UTR | ACAUCGUGUGUGUGUGUGUGUGUGUGUGUGUGU |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 23824327 / GSE44404 |
CLIP-seq Viewer | Link |
CLIP-seq Support 20 for dataset GSM1084073 | |
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Method / RBP | HITS-CLIP / AGO2 |
Cell line / Condition | HEK293S / CLIP_hippuristanol_rep1_AbnovaAb |
Location of target site | ENST00000367833.2 | 3UTR | ACAUCGUGUGUGUGUGUGUGUGUGUGUGUGUGU |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 23824327 / GSE44404 |
CLIP-seq Viewer | Link |
CLIP-seq Support 21 for dataset GSM1084074 | |
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Method / RBP | HITS-CLIP / AGO2 |
Cell line / Condition | HEK293S / CLIP_nohippuristanol_rep1_SantaCruzAb |
Location of target site | ENST00000367833.2 | 3UTR | ACAUCGUGUGUGUGUGUGUGUGUGUGUGUGUGUGU |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 23824327 / GSE44404 |
CLIP-seq Viewer | Link |
CLIP-seq Support 22 for dataset GSM1084075 | |
---|---|
Method / RBP | HITS-CLIP / AGO2 |
Cell line / Condition | HEK293S / CLIP_hippuristanol_rep1_SantaCruzAb |
Location of target site | ENST00000367833.2 | 3UTR | ACAUCGUGUGUGUGUGUGUGUGUGUGUGU |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 23824327 / GSE44404 |
CLIP-seq Viewer | Link |
CLIP-seq Support 23 for dataset GSM1084076 | |
---|---|
Method / RBP | HITS-CLIP / AGO2 |
Cell line / Condition | HEK293S / CLIP_nohippuristanol_rep1_SigmaAb |
Location of target site | ENST00000367833.2 | 3UTR | ACAUCGUGUGUGUGUGUGUGUGUGUGUGUGUGU |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 23824327 / GSE44404 |
CLIP-seq Viewer | Link |
CLIP-seq Support 24 for dataset GSM1084077 | |
---|---|
Method / RBP | HITS-CLIP / AGO2 |
Cell line / Condition | HEK293S / CLIP_hippuristanol_rep1_SigmaAb |
Location of target site | ENST00000367833.2 | 3UTR | AACAUCGUGUGUGUGUGUGUGUGUGUGUGUGUGU |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 23824327 / GSE44404 |
CLIP-seq Viewer | Link |
CLIP-seq Support 25 for dataset GSM1084078 | |
---|---|
Method / RBP | HITS-CLIP / AGO2 |
Cell line / Condition | HEK293S / CLIP_nohippuristanol_rep2_AbnovaAb |
Location of target site | ENST00000367833.2 | 3UTR | ACAUCGUGUGUGUGUGUGUGUGUGUGUGUGUGU |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 23824327 / GSE44404 |
CLIP-seq Viewer | Link |
CLIP-seq Support 26 for dataset GSM1084079 | |
---|---|
Method / RBP | HITS-CLIP / AGO2 |
Cell line / Condition | HEK293S / CLIP_hippuristanol_rep2_AbnovaAb |
Location of target site | ENST00000367833.2 | 3UTR | ACAUCGUGUGUGUGUGUGUGUGUGUGUGUGUGU |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 23824327 / GSE44404 |
CLIP-seq Viewer | Link |
CLIP-seq Support 27 for dataset GSM1084081 | |
---|---|
Method / RBP | HITS-CLIP / AGO2 |
Cell line / Condition | HEK293S / CLIP_hippuristanol_rep2_SantaCruzAb |
Location of target site | ENST00000367833.2 | 3UTR | ACAUCGUGUGUGUGUGUGUGUGUGUGUGUGUGU |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 23824327 / GSE44404 |
CLIP-seq Viewer | Link |
CLIP-seq Support 28 for dataset GSM1084082 | |
---|---|
Method / RBP | HITS-CLIP / AGO2 |
Cell line / Condition | HEK293S / CLIP_nohippuristanol_rep2_SigmaAb |
Location of target site | ENST00000367833.2 | 3UTR | ACAUCGUGUGUGUGUGUGUGUGUGUGUGUGUGU |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 23824327 / GSE44404 |
CLIP-seq Viewer | Link |
CLIP-seq Support 29 for dataset GSM1084083 | |
---|---|
Method / RBP | HITS-CLIP / AGO2 |
Cell line / Condition | HEK293S / CLIP_hippuristanol_rep2_SigmaAb |
Location of target site | ENST00000367833.2 | 3UTR | ACAUCGUGUGUGUGUGUGUGUGUGUGUGUGUGUGU |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 23824327 / GSE44404 |
CLIP-seq Viewer | Link |
MiRNA-Target Expression Profile | |||||||
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MiRNA-Target Expression Profile (TCGA) | |||||||
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167 hsa-miR-6501-5p Target Genes:
Functional analysis:
ID![]() |
Target | Description | Validation methods |
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Strong evidence | Less strong evidence | |||||||||||
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|||||
MIRT156859 | FAM126B | family with sequence similarity 126 member B | ![]() |
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2 | 2 | ||||||
MIRT173355 | TP53INP1 | tumor protein p53 inducible nuclear protein 1 | ![]() |
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2 | 2 | ||||||
MIRT369102 | CHAC1 | ChaC glutathione specific gamma-glutamylcyclotransferase 1 | ![]() |
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2 | 2 | ||||||
MIRT442037 | TRPV2 | transient receptor potential cation channel subfamily V member 2 | ![]() |
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2 | 2 | ||||||
MIRT442829 | AZIN1 | antizyme inhibitor 1 | ![]() |
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2 | 2 | ||||||
MIRT443729 | CCND2 | cyclin D2 | ![]() |
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2 | 2 | ||||||
MIRT453771 | NUCB1 | nucleobindin 1 | ![]() |
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2 | 10 | ||||||
MIRT453875 | IFRD1 | interferon related developmental regulator 1 | ![]() |
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2 | 12 | ||||||
MIRT454229 | OSBPL10 | oxysterol binding protein like 10 | ![]() |
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2 | 11 | ||||||
MIRT458829 | RPUSD2 | RNA pseudouridylate synthase domain containing 2 | ![]() |
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2 | 2 | ||||||
MIRT459898 | PIGO | phosphatidylinositol glycan anchor biosynthesis class O | ![]() |
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2 | 10 | ||||||
MIRT464162 | VMP1 | vacuole membrane protein 1 | ![]() |
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2 | 15 | ||||||
MIRT495411 | SMAD2 | SMAD family member 2 | ![]() |
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2 | 2 | ||||||
MIRT496906 | TRIM56 | tripartite motif containing 56 | ![]() |
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2 | 2 | ||||||
MIRT498653 | AP3B2 | adaptor related protein complex 3 beta 2 subunit | ![]() |
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2 | 6 | ||||||
MIRT498706 | PGAM5 | PGAM family member 5, mitochondrial serine/threonine protein phosphatase | ![]() |
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2 | 10 | ||||||
MIRT499308 | ZNF485 | zinc finger protein 485 | ![]() |
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2 | 6 | ||||||
MIRT499707 | NFATC2IP | nuclear factor of activated T-cells 2 interacting protein | ![]() |
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2 | 10 | ||||||
MIRT499755 | CIRH1A | UTP4, small subunit processome component | ![]() |
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2 | 6 | ||||||
MIRT499827 | PCSK9 | proprotein convertase subtilisin/kexin type 9 | ![]() |
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2 | 8 | ||||||
MIRT503691 | MAVS | mitochondrial antiviral signaling protein | ![]() |
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2 | 2 | ||||||
MIRT512418 | LAYN | layilin | ![]() |
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2 | 4 | ||||||
MIRT516232 | RAB3B | RAB3B, member RAS oncogene family | ![]() |
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2 | 2 | ||||||
MIRT522554 | MCAM | melanoma cell adhesion molecule | ![]() |
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2 | 4 | ||||||
MIRT523760 | FBXO27 | F-box protein 27 | ![]() |
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2 | 4 | ||||||
MIRT525107 | PRKD2 | protein kinase D2 | ![]() |
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2 | 2 | ||||||
MIRT525919 | KIAA0391 | KIAA0391 | ![]() |
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2 | 2 | ||||||
MIRT527246 | COMMD6 | COMM domain containing 6 | ![]() |
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2 | 2 | ||||||
MIRT527564 | ADCY7 | adenylate cyclase 7 | ![]() |
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2 | 2 | ||||||
MIRT528764 | CD1D | CD1d molecule | ![]() |
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2 | 2 | ||||||
MIRT529362 | YWHAB | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta | ![]() |
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2 | 4 | ||||||
MIRT529464 | ZNF546 | zinc finger protein 546 | ![]() |
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2 | 2 | ||||||
MIRT530676 | CHRNB1 | cholinergic receptor nicotinic beta 1 subunit | ![]() |
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2 | 4 | ||||||
MIRT531635 | C19orf52 | translocase of inner mitochondrial membrane 29 | ![]() |
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2 | 4 | ||||||
MIRT531909 | SLC4A1 | solute carrier family 4 member 1 (Diego blood group) | ![]() |
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2 | 2 | ||||||
MIRT532172 | SEC14L5 | SEC14 like lipid binding 5 | ![]() |
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2 | 4 | ||||||
MIRT534234 | SLC25A16 | solute carrier family 25 member 16 | ![]() |
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2 | 4 | ||||||
MIRT534561 | RRAGD | Ras related GTP binding D | ![]() |
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2 | 2 | ||||||
MIRT534971 | PSD3 | pleckstrin and Sec7 domain containing 3 | ![]() |
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2 | 2 | ||||||
MIRT536738 | HSPA4L | heat shock protein family A (Hsp70) member 4 like | ![]() |
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2 | 2 | ||||||
MIRT538544 | CELF1 | CUGBP Elav-like family member 1 | ![]() |
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2 | 2 | ||||||
MIRT540462 | ZNF71 | zinc finger protein 71 | ![]() |
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2 | 2 | ||||||
MIRT540554 | PPIC | peptidylprolyl isomerase C | ![]() |
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2 | 2 | ||||||
MIRT543593 | KIAA1549 | KIAA1549 | ![]() |
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2 | 2 | ||||||
MIRT543963 | RNF20 | ring finger protein 20 | ![]() |
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2 | 2 | ||||||
MIRT544047 | C9orf64 | chromosome 9 open reading frame 64 | ![]() |
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2 | 2 | ||||||
MIRT544670 | AP1S1 | adaptor related protein complex 1 sigma 1 subunit | ![]() |
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2 | 2 | ||||||
MIRT550665 | TRAF1 | TNF receptor associated factor 1 | ![]() |
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2 | 2 | ||||||
MIRT558540 | CSNK1G3 | casein kinase 1 gamma 3 | ![]() |
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2 | 4 | ||||||
MIRT574917 | Vmp1 | vacuole membrane protein 1 | ![]() |
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2 | 9 | ||||||
MIRT575298 | Osbpl10 | oxysterol binding protein-like 10 | ![]() |
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2 | 7 | ||||||
MIRT607960 | SNX22 | sorting nexin 22 | ![]() |
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2 | 2 | ||||||
MIRT610649 | TIPRL | TOR signaling pathway regulator | ![]() |
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2 | 8 | ||||||
MIRT615899 | GATAD1 | GATA zinc finger domain containing 1 | ![]() |
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2 | 2 | ||||||
MIRT617438 | CCS | copper chaperone for superoxide dismutase | ![]() |
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2 | 2 | ||||||
MIRT617510 | C5orf45 | MRN complex interacting protein | ![]() |
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2 | 2 | ||||||
MIRT617548 | MTO1 | mitochondrial tRNA translation optimization 1 | ![]() |
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2 | 2 | ||||||
MIRT620565 | WBSCR27 | methyltransferase like 27 | ![]() |
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2 | 2 | ||||||
MIRT623166 | NAA50 | N(alpha)-acetyltransferase 50, NatE catalytic subunit | ![]() |
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2 | 2 | ||||||
MIRT624161 | DGKE | diacylglycerol kinase epsilon | ![]() |
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2 | 2 | ||||||
MIRT626090 | MKLN1 | muskelin 1 | ![]() |
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2 | 2 | ||||||
MIRT627010 | FIG4 | FIG4 phosphoinositide 5-phosphatase | ![]() |
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2 | 2 | ||||||
MIRT627073 | SF3A1 | splicing factor 3a subunit 1 | ![]() |
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2 | 2 | ||||||
MIRT627136 | HS3ST1 | heparan sulfate-glucosamine 3-sulfotransferase 1 | ![]() |
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2 | 2 | ||||||
MIRT627340 | TSHZ2 | teashirt zinc finger homeobox 2 | ![]() |
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2 | 2 | ||||||
MIRT627436 | TAS2R5 | taste 2 receptor member 5 | ![]() |
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2 | 2 | ||||||
MIRT628273 | CYB5D1 | cytochrome b5 domain containing 1 | ![]() |
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2 | 2 | ||||||
MIRT629091 | F2RL1 | F2R like trypsin receptor 1 | ![]() |
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2 | 4 | ||||||
MIRT629282 | UNC13A | unc-13 homolog A | ![]() |
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2 | 2 | ||||||
MIRT630122 | ARHGEF5 | Rho guanine nucleotide exchange factor 5 | ![]() |
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2 | 2 | ||||||
MIRT630247 | SMTNL2 | smoothelin like 2 | ![]() |
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2 | 2 | ||||||
MIRT631260 | CENPM | centromere protein M | ![]() |
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2 | 2 | ||||||
MIRT631336 | CD300E | CD300e molecule | ![]() |
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2 | 2 | ||||||
MIRT631399 | IL2RA | interleukin 2 receptor subunit alpha | ![]() |
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2 | 2 | ||||||
MIRT632593 | PDP2 | pyruvate dehyrogenase phosphatase catalytic subunit 2 | ![]() |
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2 | 2 | ||||||
MIRT632991 | DUSP18 | dual specificity phosphatase 18 | ![]() |
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2 | 2 | ||||||
MIRT633079 | CXorf21 | chromosome X open reading frame 21 | ![]() |
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2 | 2 | ||||||
MIRT634223 | TMEM132B | transmembrane protein 132B | ![]() |
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2 | 2 | ||||||
MIRT635046 | MYH11 | myosin heavy chain 11 | ![]() |
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2 | 2 | ||||||
MIRT636444 | LRCH3 | leucine rich repeats and calponin homology domain containing 3 | ![]() |
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2 | 2 | ||||||
MIRT636649 | CDK4 | cyclin dependent kinase 4 | ![]() |
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2 | 2 | ||||||
MIRT637129 | BAMBI | BMP and activin membrane bound inhibitor | ![]() |
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2 | 2 | ||||||
MIRT637282 | IBA57 | IBA57 homolog, iron-sulfur cluster assembly | ![]() |
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2 | 2 | ||||||
MIRT637527 | RGS9BP | regulator of G protein signaling 9 binding protein | ![]() |
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2 | 2 | ||||||
MIRT637783 | OLA1 | Obg like ATPase 1 | ![]() |
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2 | 2 | ||||||
MIRT637920 | LILRA2 | leukocyte immunoglobulin like receptor A2 | ![]() |
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2 | 2 | ||||||
MIRT638238 | SLC1A5 | solute carrier family 1 member 5 | ![]() |
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2 | 2 | ||||||
MIRT638444 | PLXDC2 | plexin domain containing 2 | ![]() |
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2 | 2 | ||||||
MIRT639765 | GPR45 | G protein-coupled receptor 45 | ![]() |
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2 | 2 | ||||||
MIRT640437 | ERVMER34-1 | endogenous retrovirus group MER34 member 1, envelope | ![]() |
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2 | 2 | ||||||
MIRT643006 | ZNF829 | zinc finger protein 829 | ![]() |
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2 | 2 | ||||||
MIRT644233 | SLC35E3 | solute carrier family 35 member E3 | ![]() |
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2 | 2 | ||||||
MIRT644661 | TMCO1 | transmembrane and coiled-coil domains 1 | ![]() |
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2 | 2 | ||||||
MIRT644957 | ATP6AP1L | ATPase H+ transporting accessory protein 1 like | ![]() |
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2 | 2 | ||||||
MIRT645086 | SLC35E2B | solute carrier family 35 member E2B | ![]() |
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2 | 2 | ||||||
MIRT645256 | DFFA | DNA fragmentation factor subunit alpha | ![]() |
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2 | 2 | ||||||
MIRT645861 | GBP6 | guanylate binding protein family member 6 | ![]() |
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2 | 2 | ||||||
MIRT645987 | ACP6 | acid phosphatase 6, lysophosphatidic | ![]() |
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2 | 2 | ||||||
MIRT646502 | FAM217B | family with sequence similarity 217 member B | ![]() |
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2 | 2 | ||||||
MIRT646811 | COX19 | COX19, cytochrome c oxidase assembly factor | ![]() |
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2 | 2 | ||||||
MIRT647706 | NFX1 | nuclear transcription factor, X-box binding 1 | ![]() |
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2 | 2 | ||||||
MIRT649657 | TEP1 | telomerase associated protein 1 | ![]() |
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2 | 2 | ||||||
MIRT650550 | YIPF4 | Yip1 domain family member 4 | ![]() |
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2 | 2 | ||||||
MIRT650785 | GSR | glutathione-disulfide reductase | ![]() |
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2 | 2 | ||||||
MIRT651461 | XIAP | X-linked inhibitor of apoptosis | ![]() |
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2 | 2 | ||||||
MIRT652098 | TRUB2 | TruB pseudouridine synthase family member 2 | ![]() |
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2 | 2 | ||||||
MIRT654117 | RPS6KA5 | ribosomal protein S6 kinase A5 | ![]() |
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2 | 2 | ||||||
MIRT658901 | DPY19L4 | dpy-19 like 4 | ![]() |
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2 | 2 | ||||||
MIRT659370 | CREG2 | cellular repressor of E1A stimulated genes 2 | ![]() |
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2 | 2 | ||||||
MIRT662537 | MTAP | methylthioadenosine phosphorylase | ![]() |
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2 | 2 | ||||||
MIRT662617 | MCM8 | minichromosome maintenance 8 homologous recombination repair factor | ![]() |
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2 | 2 | ||||||
MIRT663491 | IYD | iodotyrosine deiodinase | ![]() |
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2 | 2 | ||||||
MIRT663899 | MRI1 | methylthioribose-1-phosphate isomerase 1 | ![]() |
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2 | 2 | ||||||
MIRT664552 | MKI67IP | nucleolar protein interacting with the FHA domain of MKI67 | ![]() |
1 | 1 | |||||||
MIRT664582 | HSD17B12 | hydroxysteroid 17-beta dehydrogenase 12 | ![]() |
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2 | 2 | ||||||
MIRT664953 | PTCD3 | pentatricopeptide repeat domain 3 | ![]() |
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2 | 2 | ||||||
MIRT665193 | ESF1 | ESF1 nucleolar pre-rRNA processing protein homolog | ![]() |
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2 | 2 | ||||||
MIRT665446 | WDR17 | WD repeat domain 17 | ![]() |
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2 | 2 | ||||||
MIRT665894 | TCEANC2 | transcription elongation factor A N-terminal and central domain containing 2 | ![]() |
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2 | 2 | ||||||
MIRT666480 | SBNO1 | strawberry notch homolog 1 | ![]() |
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2 | 2 | ||||||
MIRT666514 | RNF170 | ring finger protein 170 | ![]() |
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2 | 2 | ||||||
MIRT666692 | RBM23 | RNA binding motif protein 23 | ![]() |
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2 | 2 | ||||||
MIRT666791 | PSMD1 | proteasome 26S subunit, non-ATPase 1 | ![]() |
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2 | 2 | ||||||
MIRT667453 | MAPK14 | mitogen-activated protein kinase 14 | ![]() |
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2 | 2 | ||||||
MIRT667553 | LRAT | lecithin retinol acyltransferase | ![]() |
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2 | 4 | ||||||
MIRT667744 | KDELR1 | KDEL endoplasmic reticulum protein retention receptor 1 | ![]() |
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2 | 2 | ||||||
MIRT668080 | GMEB1 | glucocorticoid modulatory element binding protein 1 | ![]() |
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2 | 2 | ||||||
MIRT668114 | GK5 | glycerol kinase 5 (putative) | ![]() |
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2 | 2 | ||||||
MIRT668501 | ESYT2 | extended synaptotagmin 2 | ![]() |
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2 | 2 | ||||||
MIRT668942 | CNKSR3 | CNKSR family member 3 | ![]() |
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2 | 2 | ||||||
MIRT670408 | ELP2 | elongator acetyltransferase complex subunit 2 | ![]() |
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2 | 2 | ||||||
MIRT671134 | CD226 | CD226 molecule | ![]() |
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2 | 2 | ||||||
MIRT671919 | PLEKHS1 | pleckstrin homology domain containing S1 | ![]() |
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2 | 4 | ||||||
MIRT672287 | GP2 | glycoprotein 2 | ![]() |
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2 | 2 | ||||||
MIRT672427 | POLR2D | RNA polymerase II subunit D | ![]() |
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2 | 2 | ||||||
MIRT672762 | UBE2V2 | ubiquitin conjugating enzyme E2 V2 | ![]() |
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2 | 2 | ||||||
MIRT672923 | LRRC2 | leucine rich repeat containing 2 | ![]() |
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2 | 2 | ||||||
MIRT673150 | C1orf50 | chromosome 1 open reading frame 50 | ![]() |
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2 | 2 | ||||||
MIRT673309 | UBE2G2 | ubiquitin conjugating enzyme E2 G2 | ![]() |
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2 | 2 | ||||||
MIRT673560 | PLA2G16 | phospholipase A2 group XVI | ![]() |
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2 | 2 | ||||||
MIRT673895 | DCTN6 | dynactin subunit 6 | ![]() |
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2 | 2 | ||||||
MIRT674513 | PRR23A | proline rich 23A | ![]() |
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2 | 2 | ||||||
MIRT674614 | RBBP4 | RB binding protein 4, chromatin remodeling factor | ![]() |
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2 | 2 | ||||||
MIRT674747 | SLC16A1 | solute carrier family 16 member 1 | ![]() |
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2 | 2 | ||||||
MIRT675693 | PIWIL1 | piwi like RNA-mediated gene silencing 1 | ![]() |
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2 | 2 | ||||||
MIRT675890 | SNAP29 | synaptosome associated protein 29 | ![]() |
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2 | 2 | ||||||
MIRT685271 | KIAA1143 | KIAA1143 | ![]() |
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2 | 2 | ||||||
MIRT686057 | KCNA7 | potassium voltage-gated channel subfamily A member 7 | ![]() |
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2 | 2 | ||||||
MIRT693886 | C3orf62 | chromosome 3 open reading frame 62 | ![]() |
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2 | 2 | ||||||
MIRT695594 | TMEM199 | transmembrane protein 199 | ![]() |
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2 | 2 | ||||||
MIRT696592 | ORMDL2 | ORMDL sphingolipid biosynthesis regulator 2 | ![]() |
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2 | 2 | ||||||
MIRT698041 | TRPM7 | transient receptor potential cation channel subfamily M member 7 | ![]() |
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2 | 2 | ||||||
MIRT699907 | RUNDC1 | RUN domain containing 1 | ![]() |
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2 | 2 | ||||||
MIRT706608 | CYB5B | cytochrome b5 type B | ![]() |
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2 | 2 | ||||||
MIRT706628 | PNPT1 | polyribonucleotide nucleotidyltransferase 1 | ![]() |
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2 | 2 | ||||||
MIRT706640 | NCBP2 | nuclear cap binding protein subunit 2 | ![]() |
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2 | 2 | ||||||
MIRT706676 | COL13A1 | collagen type XIII alpha 1 chain | ![]() |
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2 | 2 | ||||||
MIRT706723 | RFK | riboflavin kinase | ![]() |
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2 | 2 | ||||||
MIRT706857 | MAFF | MAF bZIP transcription factor F | ![]() |
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2 | 2 | ||||||
MIRT706891 | ST3GAL1 | ST3 beta-galactoside alpha-2,3-sialyltransferase 1 | ![]() |
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2 | 2 | ||||||
MIRT706958 | FANCC | Fanconi anemia complementation group C | ![]() |
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2 | 2 | ||||||
MIRT706976 | XPO5 | exportin 5 | ![]() |
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2 | 2 | ||||||
MIRT707010 | RRP36 | ribosomal RNA processing 36 | ![]() |
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2 | 2 | ||||||
MIRT707028 | ACTR5 | ARP5 actin related protein 5 homolog | ![]() |
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2 | 2 | ||||||
MIRT707068 | MED29 | mediator complex subunit 29 | ![]() |
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2 | 2 | ||||||
MIRT713253 | ZFP30 | ZFP30 zinc finger protein | ![]() |
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2 | 2 | ||||||
MIRT719130 | NR2F6 | nuclear receptor subfamily 2 group F member 6 | ![]() |
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2 | 2 |
miRNA-Drug Resistance Associations | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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