pre-miRNA Information
pre-miRNA hsa-mir-1306   
Genomic Coordinates chr22: 20086058 - 20086142
Synonyms MIRN1306, hsa-mir-1306, MIR1306
Description Homo sapiens miR-1306 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-1306-5p
Sequence 15| CCACCUCCCCUGCAAACGUCCA |36
Evidence Not_experimental
Experiments
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSM5858927 8 COSMIC
COSM8222405 15 COSMIC
COSM1032175 17 COSMIC
COSM122562 22 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1197492175 14 dbSNP
rs1245517093 17 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol VSIG10   
Synonyms -
Description V-set and immunoglobulin domain containing 10
Transcript NM_019086   
Expression
Putative miRNA Targets on VSIG10
3'UTR of VSIG10
(miRNA target sites are highlighted)
>VSIG10|NM_019086|3'UTR
   1 AGAAGAGGATGGTCCATGGTTGTCTTGCTCTGAAAGCTTGGAGAGCTACATTGAAGACGAGCTCTTCATTCAGCTTTGAC
  81 TCCACCTGCACCCCTGGCGGGGGCTTGCACTAACAATGTTTGGGTCTCAGCAAAAAACAAAACCAAGCACACACATCTTT
 161 CCTTCCATGTATTGAAAAACATTGGTTTGATTTGCTCTAAGTTTTCCCAATGATGTTTAAAAGCTTTGAGAAGGAAAGCT
 241 GCTTTGGTGTCTGAGGTGCCACTTCTGCTGTGAATCCTGGCTTTATCCAGGTTGATCTACTGTGATAGATGCTGATTTAG
 321 AGGGAACAGAGGTCAGGGAAGCACTGGGTCTTGGTGCCTTTTGCCGCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGG
 401 AGTCTCCCTCTATTGCCCAGGCTGGAGTGCAATGGCACGATCTTGGCTCACCACAACTTCTGCCTCCCAGGTTCAAGCGA
 481 TTCTCCTGCCTCAGCCACGGCACCTTGCAAATATCAGCTCCTTGGAACAGGTGAAGTTCCAGGTACCAATGCCAATCAGA
 561 GGAAGGCAGTTTGGTTCAGGCTTTGGAGTTAGAAACACCTGAAGTTGAATCTGGGCTCTGTTGCTTCCTTCTTTCATGGG
 641 CTAGAGCACGACTCTTTACCTCTCTCTTGGCCTCAATTTCCTCACCTGTAAAATAGATGAGGAAGCTGCTCACTTATTAT
 721 TGTCTCGTTCTGAAAGCTTGGAAAGCTACATCGAAGATGAGCTCTTCATTCAGCTTTGATTTGACCTGTACCCCTGGTGG
 801 GGGATTGCACTGGCAACATTTGGGTCTCAGCAAAAAAACCAAGCACACACATCTTTCCTTCCATTTATTGAAAAACATCT
 881 TTGTAAGATCCATTCATTGAAAAACATAATCCATTTATTGAAAAATATCTTTGTAAGATCACCTGCTAAATATGAAAATC
 961 TGACTTGAATTTGTACTCTTTAAAGTTGCGTATCTGCTCTAGTGGGCAGGACCTAGGGCTTAAAGGGGAACTTCCTTTCT
1041 CCATTTCTAAGAACTGGGACTCTAAAATGAGAAGCTGGTTGTCTGAAGTAACCCTGCAGGTGTGGTTGGGGAAGGTCTGT
1121 TTTCTTGGATGAAGGAACTAAACTAAGCATATCAGAGCACTGTCTTAACCAGTTTTATTTCCCTGGAGATAGAATTCTTT
1201 TAAAAAGAGTTAGGGAGCTGGTAATAGGAAGTGCCTTTCATTATAACTACATTTTGCAGAGCTTCATATTTATATACAAG
1281 CCTCCTAGGTGATACACTGTTAGCTTGCAGACTTTCCTATGCTTCATTTCTCCTGTTGCTTTCAAAGAAGGCAGGAGACA
1361 CGTTTAATAACGGAGTATCTGGTGATAAGAATTGCTTGGGCAAACCAGCTCATCTGGACTCTTTCTCAGTCTTGGAAGTG
1441 GGAAGAGGAAAACTTGTTTCCTTCCTGCTTCTTAAGGATATTCTGAGGGTACACTGATCAATAACACTAAATTTGGAATG
1521 AAAATACCATGTGATGAGTTTAGCCTGCTGATGCTTCCAGTAGATCCTTGTATAGTTTCAAGATTTAAGTTTTCCGATTT
1601 CATATAAATTTCTTAAAGTCGAGGACCTTATAAGGGTGCAATGGATGTTTGCTAAATATGAAAAACTGACTTGAATTTGC
1681 ACTCTTTAATGTTGCGTATCTGCTCTAGTGGGCAGGACCTAGGGCTTAAAGGGGAACTTCCTTTCTCCAATTCTAGGAAC
1761 TGGGACTCTAAAATGAGAAGCTGGTTGTCTGAAGTAACCCTGCAGGTGTGGTTGGGGAAGGTCTGTTTTCTTGGATGAAG
1841 GGATTAAACTGAGCAAATCACTAGAAGTATGCCCTGTCCCCTGCTCAGAACACTGGGGAGCTCAAGAGTGGGCTGCAATG
1921 TGCACCCCTCAGGAATAGCTGTGAATTGCAGGTCTACTGGCTTTTTGCTTTTTGTCTTTTGCTGCAAGGTACCCCACGTA
2001 CTTAACCATTCTCAACAGTGTAAATCAGTGTCATTTTAGAATGAGATACTCAGCTTGCTTCTAAAGTCACTGAATTACTG
2081 AGTGAGTCTCTCCTTTAGAGTCTTCGGCAACCAAATTCCAGAATTGAAGAGTCTACTACTCAGAGGCAACAAGATTAAAA
2161 AAAGAAAACACAAAAACTGTTGAGGTGAAAAAAAAAAAAAACCCTAGCTAGGAACACAGAGAATGTTTTGTAGGATCACT
2241 GGGATATTTTCCACAACTTCCTCTTCTCTAGCACACACATCTGTTGATAGGAAATATTTGAGGGTTTTTCCACTACCAAA
2321 TGGGAGCTTCATGGTCCTGGTGTCAAACACTATAAACCTTTGACCAGCTGAGCTGTGACTGCTGTCACATATCTGAGTCC
2401 TGTGTGCACAGTAATATCCTGGGTCAGGTAAAATCCAGGTCTTCAAGTTTTAAGGATTTTTTGAAGAATTCGGGCTTCTT
2481 TAAGACGATCCATGCCCAAATCCACAAGCTTGTTGACAGTGGATTACAGTTTGTGTGGCAAAGTCCAAGTTGTTACACTG
2561 TGCTTTAAAAAAAATCTTATCTGCATGTATTGTTAACTTAGAGACCATGAGATCTATTTATCAGGACCAGGAAGATACAC
2641 ACTTCAGGTCCATTGCAACTGACTTTTTTCTTGTTTTTCTCAAACCCTGGTGGAGCCTGGGAAGGGGGCCTCCACAATTC
2721 TGTGGCTTTGATATTAGCCCCAATTCTCACAAGCACATACAAGCCCCATAATTGCCGCAGGAAAACACAAGATGGAAAAT
2801 TGCAATAACCCATGCACTGAGACTTAGAAAATCATCCTTACTAGGCAAAATGTATTATGATGCAATAAGTGCCAACTGAT
2881 ATTTCTCACGTTGGGACTGGCCAGGAACTGCTGCAAAGAAAAATAAGCAGCTCCTTCTCCATTATTTACATTTTAAGATG
2961 TGGTGGGGGGAGGTTGGGAGAAATTAGTTCTGAGGTTATCATATGCCTTTTTTAAAAGATAATGGAATAAAGCTATTTTT
3041 AAGTAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' acCUGCA-AACGUCCCCUCCAcc 5'
            ||:||  || :||||||||  
Target 5' aaGATGTGGTG-GGGGGAGGTtg 3'
2955 - 2976 143.00 -24.70
2
miRNA  3' accugcaaacgucccCUCCACc 5'
                         |||||| 
Target 5' gctgctttggtgtctGAGGTGc 3'
238 - 259 120.00 -9.40
3
miRNA  3' accugcaaacgucccCUCCACc 5'
                         |||||| 
Target 5' aacacaaaaactgttGAGGTGa 3'
2167 - 2188 120.00 -7.70
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN24304287 14 COSMIC
COSN30108364 58 COSMIC
COSN31500556 59 COSMIC
COSN32053516 64 COSMIC
COSN29270048 92 COSMIC
COSN30461694 94 COSMIC
COSN30144132 99 COSMIC
COSN30461133 111 COSMIC
COSN31488773 146 COSMIC
COSN30148893 157 COSMIC
COSN31598697 157 COSMIC
COSN30101798 170 COSMIC
COSN31582344 173 COSMIC
COSN30187974 210 COSMIC
COSN30108809 254 COSMIC
COSN7312546 857 COSMIC
COSN5932030 904 COSMIC
COSN31959408 1295 COSMIC
COSN20647237 1757 COSMIC
COSN27096668 1812 COSMIC
COSN29312710 2079 COSMIC
COSN10098954 2113 COSMIC
COSN20110187 2187 COSMIC
COSN32055652 2286 COSMIC
COSN4727079 2548 COSMIC
COSN5713018 2661 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs769732873 2 dbSNP
rs201690227 5 dbSNP
rs776469682 7 dbSNP
rs202051447 8 dbSNP
rs747114121 9 dbSNP
rs1007053680 11 dbSNP
rs780118172 16 dbSNP
rs1320964436 17 dbSNP
rs1400746278 19 dbSNP
rs758435131 20 dbSNP
rs377534719 24 dbSNP
rs374194907 27 dbSNP
rs1275574675 28 dbSNP
rs757605743 35 dbSNP
rs754227208 37 dbSNP
rs764567841 47 dbSNP
rs898533219 52 dbSNP
rs769555825 58 dbSNP
rs1394020814 59 dbSNP
rs1422866913 61 dbSNP
rs747851999 62 dbSNP
rs556199135 63 dbSNP
rs1173139035 76 dbSNP
rs1401068157 78 dbSNP
rs1387940306 81 dbSNP
rs1400576913 82 dbSNP
rs1359634366 85 dbSNP
rs1465187597 88 dbSNP
rs1327371307 97 dbSNP
rs928689503 98 dbSNP
rs556583563 99 dbSNP
rs113033206 103 dbSNP
rs372708606 108 dbSNP
rs913373421 109 dbSNP
rs990450327 112 dbSNP
rs1316688187 122 dbSNP
rs916419379 124 dbSNP
rs1198705071 126 dbSNP
rs1291489827 129 dbSNP
rs536500016 131 dbSNP
rs1452099484 147 dbSNP
rs567446093 152 dbSNP
rs1275519686 153 dbSNP
rs1266465782 154 dbSNP
rs780816567 155 dbSNP
rs921599100 162 dbSNP
rs974370556 168 dbSNP
rs1297186345 172 dbSNP
rs1424621842 180 dbSNP
rs936760965 181 dbSNP
rs1166224399 185 dbSNP
rs553593087 194 dbSNP
rs1393043113 202 dbSNP
rs1245733961 205 dbSNP
rs533725410 210 dbSNP
rs1406431768 214 dbSNP
rs1342689086 223 dbSNP
rs1364053755 233 dbSNP
rs965798152 238 dbSNP
rs1298362266 241 dbSNP
rs1018679937 251 dbSNP
rs925386110 255 dbSNP
rs754565440 256 dbSNP
rs193024631 260 dbSNP
rs1285423457 276 dbSNP
rs1356482465 278 dbSNP
rs1227629677 279 dbSNP
rs1289527060 285 dbSNP
rs796358608 288 dbSNP
rs1489114876 297 dbSNP
rs1217070211 299 dbSNP
rs978129897 332 dbSNP
rs950611311 341 dbSNP
rs1191355608 350 dbSNP
rs1027895712 357 dbSNP
rs539955446 365 dbSNP
rs1375086361 366 dbSNP
rs372925120 367 dbSNP
rs57466188 368 dbSNP
rs895028835 368 dbSNP
rs1310317450 369 dbSNP
rs1030306543 394 dbSNP
rs1159620953 394 dbSNP
rs1240858502 394 dbSNP
rs1258550156 394 dbSNP
rs1285015800 394 dbSNP
rs1312745026 394 dbSNP
rs1335810534 394 dbSNP
rs1340493409 394 dbSNP
rs1355759511 394 dbSNP
rs1380134783 394 dbSNP
rs1402480774 394 dbSNP
rs1422137404 394 dbSNP
rs1446665333 394 dbSNP
rs1466280010 394 dbSNP
rs1491021672 394 dbSNP
rs35019751 394 dbSNP
rs397850129 394 dbSNP
rs764334329 394 dbSNP
rs1334104317 395 dbSNP
rs1413620687 395 dbSNP
rs1431134077 395 dbSNP
rs1387730811 398 dbSNP
rs1447373688 404 dbSNP
rs1167009995 405 dbSNP
rs868196030 410 dbSNP
rs113098973 412 dbSNP
rs1370046569 415 dbSNP
rs1185130743 416 dbSNP
rs187889481 422 dbSNP
rs747497625 427 dbSNP
rs1252461537 429 dbSNP
rs1179752761 431 dbSNP
rs1250448260 438 dbSNP
rs1417631307 439 dbSNP
rs113568436 447 dbSNP
rs1482129003 457 dbSNP
rs1272350195 461 dbSNP
rs1210704984 462 dbSNP
rs964949425 464 dbSNP
rs12311701 466 dbSNP
rs1001462810 467 dbSNP
rs907315855 470 dbSNP
rs568797730 471 dbSNP
rs1282585140 478 dbSNP
rs758718917 479 dbSNP
rs1394245695 485 dbSNP
rs1351442317 494 dbSNP
rs142144474 498 dbSNP
rs184209527 499 dbSNP
rs1223096262 507 dbSNP
rs866201806 517 dbSNP
rs946115514 525 dbSNP
rs1368204695 549 dbSNP
rs1199352661 554 dbSNP
rs892002929 558 dbSNP
rs1327593922 561 dbSNP
rs1479935379 562 dbSNP
rs1006381588 563 dbSNP
rs1268457031 565 dbSNP
rs888231904 574 dbSNP
rs1196763485 576 dbSNP
rs1161031693 578 dbSNP
rs560756060 584 dbSNP
rs1026673456 591 dbSNP
rs1460757215 604 dbSNP
rs1169121136 614 dbSNP
rs750746208 619 dbSNP
rs1370893184 620 dbSNP
rs1054991315 623 dbSNP
rs138924054 624 dbSNP
rs1364673304 625 dbSNP
rs1402881608 634 dbSNP
rs1301452362 636 dbSNP
rs922148563 637 dbSNP
rs533543088 643 dbSNP
rs137979895 644 dbSNP
rs896839496 649 dbSNP
rs564592572 650 dbSNP
rs768802018 651 dbSNP
rs911544642 654 dbSNP
rs983256997 656 dbSNP
rs950520113 660 dbSNP
rs1490269764 669 dbSNP
rs1453330202 674 dbSNP
rs1027493509 676 dbSNP
rs949345008 685 dbSNP
rs1488402468 686 dbSNP
rs1185615648 694 dbSNP
rs973612363 700 dbSNP
rs959296750 703 dbSNP
rs1055394811 711 dbSNP
rs544658581 717 dbSNP
rs1384535351 718 dbSNP
rs3202930 719 dbSNP
rs555779715 720 dbSNP
rs945406630 722 dbSNP
rs923286583 726 dbSNP
rs976081796 727 dbSNP
rs1315908171 737 dbSNP
rs1359335395 738 dbSNP
rs1244487007 740 dbSNP
rs78087118 750 dbSNP
rs573634192 753 dbSNP
rs1010323670 764 dbSNP
rs1332282074 766 dbSNP
rs891839501 783 dbSNP
rs1321203542 786 dbSNP
rs1054641926 789 dbSNP
rs1483906186 792 dbSNP
rs1389159687 794 dbSNP
rs776680228 796 dbSNP
rs1161099577 797 dbSNP
rs1442673969 799 dbSNP
rs1180474604 815 dbSNP
rs553630581 828 dbSNP
rs1158571687 839 dbSNP
rs1380637430 839 dbSNP
rs936129430 839 dbSNP
rs1343650101 840 dbSNP
rs1407166675 846 dbSNP
rs1467826792 850 dbSNP
rs1337447312 852 dbSNP
rs1491144530 852 dbSNP
rs1491350597 853 dbSNP
rs1312131373 861 dbSNP
rs1451049969 861 dbSNP
rs373105748 863 dbSNP
rs900651552 871 dbSNP
rs1017837835 875 dbSNP
rs1223578838 876 dbSNP
rs866824023 877 dbSNP
rs1282673823 890 dbSNP
rs1245028291 895 dbSNP
rs1193283052 896 dbSNP
rs771060099 906 dbSNP
rs1465507936 909 dbSNP
rs1261931096 919 dbSNP
rs73217917 921 dbSNP
rs1200405298 926 dbSNP
rs1238719232 926 dbSNP
rs1469625003 927 dbSNP
rs1207238919 929 dbSNP
rs1427067912 929 dbSNP
rs1316635676 937 dbSNP
rs1279995117 941 dbSNP
rs1177465851 944 dbSNP
rs191749565 946 dbSNP
rs1346569325 955 dbSNP
rs1468315353 963 dbSNP
rs1300588982 966 dbSNP
rs1439796142 973 dbSNP
rs777729114 973 dbSNP
rs557437304 976 dbSNP
rs537903013 979 dbSNP
rs1432672079 989 dbSNP
rs1370228160 990 dbSNP
rs1223702904 997 dbSNP
rs896884850 999 dbSNP
rs1344336140 1012 dbSNP
rs777202469 1019 dbSNP
rs1024608123 1025 dbSNP
rs1273168105 1036 dbSNP
rs1334803150 1044 dbSNP
rs920311635 1050 dbSNP
rs757926268 1051 dbSNP
rs1437142778 1058 dbSNP
rs1013236303 1069 dbSNP
rs1248203586 1071 dbSNP
rs568859370 1073 dbSNP
rs549006020 1075 dbSNP
rs1428871869 1076 dbSNP
rs113219917 1083 dbSNP
rs764113360 1088 dbSNP
rs548649623 1102 dbSNP
rs1001158604 1108 dbSNP
rs1327469708 1111 dbSNP
rs778240257 1115 dbSNP
rs1405947240 1119 dbSNP
rs903693299 1123 dbSNP
rs1450105144 1124 dbSNP
rs1343241943 1125 dbSNP
rs774280459 1149 dbSNP
rs1024316042 1154 dbSNP
rs1338218941 1158 dbSNP
rs1010623865 1160 dbSNP
rs1186871601 1162 dbSNP
rs956165886 1162 dbSNP
rs1033533591 1166 dbSNP
rs1485761134 1182 dbSNP
rs1195648139 1204 dbSNP
rs1040801741 1208 dbSNP
rs1212909453 1210 dbSNP
rs1475138081 1210 dbSNP
rs1441191428 1216 dbSNP
rs1166605139 1218 dbSNP
rs1416596052 1224 dbSNP
rs1277648625 1231 dbSNP
rs943381173 1233 dbSNP
rs187149577 1237 dbSNP
rs1401421473 1243 dbSNP
rs1342198203 1251 dbSNP
rs910828836 1270 dbSNP
rs1299391626 1272 dbSNP
rs1212416056 1274 dbSNP
rs985067831 1280 dbSNP
rs182459103 1285 dbSNP
rs919443488 1286 dbSNP
rs1245211672 1289 dbSNP
rs74482885 1293 dbSNP
rs1355622874 1295 dbSNP
rs900703860 1309 dbSNP
rs961138288 1332 dbSNP
rs1285233065 1336 dbSNP
rs763006757 1344 dbSNP
rs1039220599 1347 dbSNP
rs1312131782 1348 dbSNP
rs1445733328 1353 dbSNP
rs773119366 1357 dbSNP
rs1024660330 1361 dbSNP
rs769751180 1362 dbSNP
rs1421915544 1365 dbSNP
rs1167002191 1368 dbSNP
rs544476051 1371 dbSNP
rs928942208 1372 dbSNP
rs1398654825 1373 dbSNP
rs1415064697 1376 dbSNP
rs1341520021 1381 dbSNP
rs1382940180 1382 dbSNP
rs1451779973 1385 dbSNP
rs1312865240 1392 dbSNP
rs538510700 1392 dbSNP
rs562024429 1395 dbSNP
rs1278807623 1399 dbSNP
rs542234885 1403 dbSNP
rs1203652590 1405 dbSNP
rs937755522 1409 dbSNP
rs926460653 1417 dbSNP
rs1257468277 1421 dbSNP
rs568545224 1423 dbSNP
rs1483124795 1427 dbSNP
rs80245079 1431 dbSNP
rs970632173 1439 dbSNP
rs913784160 1442 dbSNP
rs1042274962 1449 dbSNP
rs553663462 1453 dbSNP
rs1182960811 1466 dbSNP
rs1363638234 1468 dbSNP
rs1202081511 1474 dbSNP
rs1009386555 1491 dbSNP
rs551719010 1493 dbSNP
rs768151962 1496 dbSNP
rs1128304 1507 dbSNP
rs1468847490 1517 dbSNP
rs988054568 1521 dbSNP
rs1402366772 1522 dbSNP
rs1391944484 1523 dbSNP
rs540093380 1527 dbSNP
rs1312910933 1531 dbSNP
rs1333796727 1540 dbSNP
rs956263140 1546 dbSNP
rs79612628 1547 dbSNP
rs1324283510 1548 dbSNP
rs943414073 1557 dbSNP
rs1000322871 1561 dbSNP
rs1353290384 1571 dbSNP
rs76341621 1573 dbSNP
rs1049508031 1575 dbSNP
rs1250213400 1582 dbSNP
rs540967871 1589 dbSNP
rs115641416 1595 dbSNP
rs574596690 1596 dbSNP
rs1479945013 1602 dbSNP
rs1461726752 1607 dbSNP
rs746503204 1612 dbSNP
rs1048472895 1620 dbSNP
rs1297560224 1621 dbSNP
rs1393990706 1622 dbSNP
rs1406548037 1626 dbSNP
rs971534002 1631 dbSNP
rs917690263 1632 dbSNP
rs1460224061 1634 dbSNP
rs993752735 1639 dbSNP
rs555149768 1644 dbSNP
rs1228736785 1645 dbSNP
rs1251260052 1654 dbSNP
rs1337783615 1667 dbSNP
rs1219110246 1680 dbSNP
rs1225182814 1681 dbSNP
rs959361131 1684 dbSNP
rs1033366386 1686 dbSNP
rs898861397 1689 dbSNP
rs753410648 1690 dbSNP
rs1000522384 1691 dbSNP
rs967982627 1695 dbSNP
rs766854718 1696 dbSNP
rs1479986204 1697 dbSNP
rs11610878 1698 dbSNP
rs1163953698 1698 dbSNP
rs926346419 1701 dbSNP
rs1046233496 1703 dbSNP
rs1364102038 1704 dbSNP
rs1382853849 1705 dbSNP
rs949263860 1711 dbSNP
rs758813392 1726 dbSNP
rs1248863749 1730 dbSNP
rs1292910297 1731 dbSNP
rs746430716 1737 dbSNP
rs1219724122 1750 dbSNP
rs779211159 1755 dbSNP
rs1262125972 1756 dbSNP
rs1272279013 1760 dbSNP
rs1185415256 1763 dbSNP
rs3087752 1769 dbSNP
rs1331118949 1770 dbSNP
rs925950434 1775 dbSNP
rs978725632 1781 dbSNP
rs754002251 1789 dbSNP
rs1017680001 1798 dbSNP
rs1036562677 1806 dbSNP
rs1347178473 1814 dbSNP
rs950266135 1820 dbSNP
rs1438941309 1828 dbSNP
rs987535476 1839 dbSNP
rs955074086 1841 dbSNP
rs1288340857 1845 dbSNP
rs917444752 1851 dbSNP
rs992040829 1860 dbSNP
rs937805685 1861 dbSNP
rs1394287458 1866 dbSNP
rs1026476393 1871 dbSNP
rs994194514 1872 dbSNP
rs1459099714 1874 dbSNP
rs1309676030 1882 dbSNP
rs1317112312 1890 dbSNP
rs111657969 1901 dbSNP
rs540182638 1918 dbSNP
rs1001801394 1919 dbSNP
rs1204159401 1920 dbSNP
rs904849505 1928 dbSNP
rs1046158219 1930 dbSNP
rs1242465289 1933 dbSNP
rs949154174 1938 dbSNP
rs1442780255 1950 dbSNP
rs1178715102 1951 dbSNP
rs1408503793 1953 dbSNP
rs892331636 1956 dbSNP
rs8239 1977 dbSNP
rs1018791380 1984 dbSNP
rs1409776618 1985 dbSNP
rs76958817 1989 dbSNP
rs1466856460 1993 dbSNP
rs1446522570 1996 dbSNP
rs529886718 1997 dbSNP
rs1027690440 1998 dbSNP
rs1330867632 2007 dbSNP
rs1286091229 2015 dbSNP
rs530989607 2018 dbSNP
rs190688314 2022 dbSNP
rs1223591250 2027 dbSNP
rs1262030658 2032 dbSNP
rs11550987 2042 dbSNP
rs548357124 2044 dbSNP
rs1206588606 2049 dbSNP
rs145475496 2049 dbSNP
rs910542830 2055 dbSNP
rs150083579 2063 dbSNP
rs954815512 2071 dbSNP
rs1232436669 2077 dbSNP
rs1249883658 2078 dbSNP
rs559073286 2082 dbSNP
rs1481573205 2084 dbSNP
rs1177211996 2088 dbSNP
rs1428726528 2093 dbSNP
rs950318434 2098 dbSNP
rs1173196556 2101 dbSNP
rs1321386274 2102 dbSNP
rs762767794 2105 dbSNP
rs545792900 2106 dbSNP
rs1441943165 2110 dbSNP
rs773314046 2112 dbSNP
rs1306641912 2118 dbSNP
rs1346993010 2119 dbSNP
rs1437762714 2120 dbSNP
rs1405232307 2124 dbSNP
rs1282056410 2142 dbSNP
rs1383199002 2147 dbSNP
rs1288849578 2150 dbSNP
rs1466981078 2153 dbSNP
rs1377769622 2155 dbSNP
rs1174961809 2156 dbSNP
rs1306912471 2157 dbSNP
rs116423199 2162 dbSNP
rs986343258 2164 dbSNP
rs1490892459 2169 dbSNP
rs1188745335 2170 dbSNP
rs1448568408 2171 dbSNP
rs1055993278 2173 dbSNP
rs1259361941 2173 dbSNP
rs1200451715 2182 dbSNP
rs1204555543 2183 dbSNP
rs1483527185 2184 dbSNP
rs1236069601 2187 dbSNP
rs1188740382 2195 dbSNP
rs1420847179 2196 dbSNP
rs1208819922 2198 dbSNP
rs1167077519 2199 dbSNP
rs1170798189 2202 dbSNP
rs1302172959 2202 dbSNP
rs1367895587 2202 dbSNP
rs397965056 2202 dbSNP
rs57049627 2202 dbSNP
rs796757942 2202 dbSNP
rs937504882 2204 dbSNP
rs202036639 2205 dbSNP
rs963984442 2206 dbSNP
rs1289441812 2207 dbSNP
rs1016493811 2208 dbSNP
rs1450159147 2216 dbSNP
rs1002395288 2224 dbSNP
rs904898817 2226 dbSNP
rs1449362818 2228 dbSNP
rs1187263733 2235 dbSNP
rs1387415911 2243 dbSNP
rs1445623859 2259 dbSNP
rs1163419687 2260 dbSNP
rs140669843 2266 dbSNP
rs1024593183 2268 dbSNP
rs932196463 2272 dbSNP
rs1344119984 2276 dbSNP
rs987776027 2277 dbSNP
rs1397183030 2279 dbSNP
rs1317089102 2281 dbSNP
rs150958414 2288 dbSNP
rs1013753358 2292 dbSNP
rs1405002342 2293 dbSNP
rs1244975724 2298 dbSNP
rs892183480 2303 dbSNP
rs1052713302 2305 dbSNP
rs1207161158 2308 dbSNP
rs1284997461 2311 dbSNP
rs1464520692 2312 dbSNP
rs966017371 2319 dbSNP
rs145089141 2320 dbSNP
rs1462199849 2326 dbSNP
rs761710102 2327 dbSNP
rs1367125020 2330 dbSNP
rs12810915 2331 dbSNP
rs903672171 2352 dbSNP
rs1406531128 2362 dbSNP
rs1455195260 2363 dbSNP
rs1338213672 2364 dbSNP
rs1039671613 2365 dbSNP
rs535503350 2367 dbSNP
rs1406721263 2368 dbSNP
rs188208625 2369 dbSNP
rs1331918075 2383 dbSNP
rs910596764 2392 dbSNP
rs987451665 2397 dbSNP
rs746730845 2402 dbSNP
rs953323607 2410 dbSNP
rs1328824383 2411 dbSNP
rs1371185332 2412 dbSNP
rs184056808 2418 dbSNP
rs1190769409 2421 dbSNP
rs78976826 2427 dbSNP
rs1424103632 2428 dbSNP
rs1200414324 2434 dbSNP
rs564821588 2435 dbSNP
rs371926353 2437 dbSNP
rs1250613946 2441 dbSNP
rs537665453 2447 dbSNP
rs1485415564 2448 dbSNP
rs963541813 2452 dbSNP
rs1177944406 2458 dbSNP
rs1275410083 2471 dbSNP
rs909375445 2472 dbSNP
rs1337685974 2474 dbSNP
rs1014655271 2478 dbSNP
rs1170767035 2482 dbSNP
rs1398292095 2484 dbSNP
rs139707510 2486 dbSNP
rs969571755 2487 dbSNP
rs548663688 2510 dbSNP
rs1025070787 2512 dbSNP
rs1350076599 2517 dbSNP
rs1013224644 2518 dbSNP
rs956681669 2522 dbSNP
rs1285226770 2528 dbSNP
rs1233087642 2529 dbSNP
rs1324393094 2529 dbSNP
rs528606624 2549 dbSNP
rs1342169325 2550 dbSNP
rs1342598317 2559 dbSNP
rs559414714 2562 dbSNP
rs1481853126 2563 dbSNP
rs1201175095 2566 dbSNP
rs946462763 2567 dbSNP
rs1432108902 2569 dbSNP
rs903722737 2573 dbSNP
rs1039556370 2574 dbSNP
rs1374709933 2575 dbSNP
rs1462475170 2575 dbSNP
rs1052123418 2577 dbSNP
rs1354345310 2577 dbSNP
rs1006815379 2592 dbSNP
rs1368505628 2598 dbSNP
rs368558947 2605 dbSNP
rs746329003 2606 dbSNP
rs1052216979 2612 dbSNP
rs1393879287 2620 dbSNP
rs779409537 2627 dbSNP
rs986458829 2638 dbSNP
rs1228851227 2641 dbSNP
rs919238473 2645 dbSNP
rs953280121 2649 dbSNP
rs1036480408 2655 dbSNP
rs778857440 2661 dbSNP
rs1487993175 2662 dbSNP
rs552190119 2664 dbSNP
rs532351741 2666 dbSNP
rs1263270186 2670 dbSNP
rs909386821 2683 dbSNP
rs796906231 2686 dbSNP
rs1474839425 2689 dbSNP
rs575577354 2690 dbSNP
rs1184094516 2696 dbSNP
rs969627494 2697 dbSNP
rs1350676140 2705 dbSNP
rs918154211 2706 dbSNP
rs564428669 2707 dbSNP
rs1250119929 2708 dbSNP
rs1436400389 2709 dbSNP
rs778170328 2709 dbSNP
rs992803521 2710 dbSNP
rs1034314942 2712 dbSNP
rs1316228217 2715 dbSNP
rs1320706424 2737 dbSNP
rs1271653999 2740 dbSNP
rs1242199266 2741 dbSNP
rs1002212451 2747 dbSNP
rs956429803 2749 dbSNP
rs1233272379 2750 dbSNP
rs1330442525 2754 dbSNP
rs868610404 2761 dbSNP
rs1207955429 2765 dbSNP
rs756269708 2766 dbSNP
rs753002816 2767 dbSNP
rs1290675971 2768 dbSNP
rs1031076935 2772 dbSNP
rs1183950754 2776 dbSNP
rs147823738 2777 dbSNP
rs967751821 2778 dbSNP
rs1162981375 2779 dbSNP
rs1018129702 2786 dbSNP
rs1365551808 2788 dbSNP
rs1457840917 2797 dbSNP
rs1006703936 2802 dbSNP
rs1387076705 2804 dbSNP
rs1455090122 2810 dbSNP
rs1303749444 2812 dbSNP
rs890944368 2814 dbSNP
rs1378928990 2825 dbSNP
rs1386962221 2825 dbSNP
rs1043275330 2826 dbSNP
rs1051049894 2833 dbSNP
rs1010390700 2836 dbSNP
rs994483461 2841 dbSNP
rs1227227074 2843 dbSNP
rs4128858 2846 dbSNP
rs546172263 2854 dbSNP
rs191868771 2857 dbSNP
rs1236636557 2859 dbSNP
rs1482161535 2865 dbSNP
rs11550988 2866 dbSNP
rs909273993 2868 dbSNP
rs1252924517 2869 dbSNP
rs1473076027 2873 dbSNP
rs4128857 2879 dbSNP
rs1409887886 2881 dbSNP
rs931923014 2882 dbSNP
rs1199931156 2887 dbSNP
rs1358875673 2889 dbSNP
rs948249438 2893 dbSNP
rs761904232 2894 dbSNP
rs1350701805 2900 dbSNP
rs753670682 2916 dbSNP
rs1213460665 2924 dbSNP
rs1346876769 2929 dbSNP
rs1219680977 2930 dbSNP
rs186145451 2934 dbSNP
rs1286978228 2937 dbSNP
rs1206342930 2939 dbSNP
rs545835606 2945 dbSNP
rs961846177 2949 dbSNP
rs576727023 2957 dbSNP
rs1181754852 2963 dbSNP
rs1249635722 2964 dbSNP
rs907680641 2965 dbSNP
rs1191908267 2967 dbSNP
rs993325511 2969 dbSNP
rs35369829 2971 dbSNP
rs1413312067 2972 dbSNP
rs1347977163 2974 dbSNP
rs1371596733 2978 dbSNP
rs1428657617 2981 dbSNP
rs1305817320 2983 dbSNP
rs114833616 2987 dbSNP
rs537296229 2999 dbSNP
rs1198098887 3000 dbSNP
rs1234648609 3003 dbSNP
rs1436568249 3003 dbSNP
rs1365381463 3005 dbSNP
rs757561303 3008 dbSNP
rs979059702 3009 dbSNP
rs866686316 3013 dbSNP
rs1297997229 3022 dbSNP
rs967807439 3023 dbSNP
rs1341212721 3025 dbSNP
rs980113677 3028 dbSNP
rs763995989 3033 dbSNP
rs1222365904 3035 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084044. RNA binding protein: AGO2. Condition:CLIP_noarsenite_rep3 HITS-CLIP data was present in GSM1084047. RNA binding protein: AGO2. Condition:CLIP_arsenite_rep4 HITS-CLIP data was present in GSM1084064. RNA binding protein: AGO2. Condition:CLIP_noemetine_AbnovaAb HITS-CLIP data was present in GSM1084065. RNA binding protein: AGO2. Condition:CLIP_emetine_AbnovaAb HITS-CLIP data was present in GSM1084066. RNA binding protein: AGO2. Condition:CLIP_noemetine_SantaCruzAb HITS-CLIP data was present in GSM1084067. RNA binding protein: AGO2. Condition:CLIP_emetine_SantaCruzAb HITS-CLIP data was present in GSM1084068. RNA binding protein: AGO2. Condition:CLIP_noemetine_SigmaAb HITS-CLIP data was present in GSM1084069. RNA binding protein: AGO2. Condition:CLIP_emetine_SigmaAb HITS-CLIP data was present in GSM1084074. RNA binding protein: AGO2. Condition:CLIP_nohippuristanol_rep1_SantaCruzAb HITS-CLIP data was present in GSM1084075. RNA binding protein: AGO2. Condition:CLIP_hippuristanol_rep1_SantaCruzAb HITS-CLIP data was present in GSM1084078. RNA binding protein: AGO2. Condition:CLIP_nohippuristanol_rep2_AbnovaAb HITS-CLIP data was present in GSM1084079. RNA binding protein: AGO2. Condition:CLIP_hippuristanol_rep2_AbnovaAb HITS-CLIP data was present in GSM1084080. RNA binding protein: AGO2. Condition:CLIP_nohippuristanol_rep2_SantaCruzAb HITS-CLIP data was present in GSM1084081. RNA binding protein: AGO2. Condition:CLIP_hippuristanol_rep2_SantaCruzAb HITS-CLIP data was present in GSM1084082. RNA binding protein: AGO2. Condition:CLIP_nohippuristanol_rep2_SigmaAb HITS-CLIP data was present in GSM1084083. RNA binding protein: AGO2. Condition:CLIP_hippuristanol_rep2_SigmaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084044
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noarsenite_rep3
Location of target site ENST00000359236.5 | 3UTR | AGGUGAAAAAAAAAAAAAA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1084047
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_arsenite_rep4
Location of target site ENST00000359236.5 | 3UTR | AGGUGAAAAAAAAAAAAAAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM1084064
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noemetine_AbnovaAb
Location of target site ENST00000359236.5 | 3UTR | GAGGUGAAAAAAAAAAAAAA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM1084065
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_emetine_AbnovaAb
Location of target site ENST00000359236.5 | 3UTR | GAGGUGAAAAAAAAAAAAAAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 5 for dataset GSM1084066
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noemetine_SantaCruzAb
Location of target site ENST00000359236.5 | 3UTR | AGGUGAAAAAAAAAAAAAA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 6 for dataset GSM1084067
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_emetine_SantaCruzAb
Location of target site ENST00000359236.5 | 3UTR | AGGUGAAAAAAAAAAAAAAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 7 for dataset GSM1084068
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noemetine_SigmaAb
Location of target site ENST00000359236.5 | 3UTR | UGAGGUGAAAAAAAAAAAAAAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 8 for dataset GSM1084069
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_emetine_SigmaAb
Location of target site ENST00000359236.5 | 3UTR | AGGUGAAAAAAAAAAAAAA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 9 for dataset GSM1084074
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_nohippuristanol_rep1_SantaCruzAb
Location of target site ENST00000359236.5 | 3UTR | UUGAGGUGAAAAAAAAAAAAAA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 10 for dataset GSM1084075
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_hippuristanol_rep1_SantaCruzAb
Location of target site ENST00000359236.5 | 3UTR | AGGUGAAAAAAAAAAAAAAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 11 for dataset GSM1084078
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_nohippuristanol_rep2_AbnovaAb
Location of target site ENST00000359236.5 | 3UTR | GAGGUGAAAAAAAAAAAAAAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 12 for dataset GSM1084079
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_hippuristanol_rep2_AbnovaAb
Location of target site ENST00000359236.5 | 3UTR | GAGGUGAAAAAAAAAAAAAAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 13 for dataset GSM1084081
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_hippuristanol_rep2_SantaCruzAb
Location of target site ENST00000359236.5 | 3UTR | GAGGUGAAAAAAAAAAAAAACC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 14 for dataset GSM1084082
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_nohippuristanol_rep2_SigmaAb
Location of target site ENST00000359236.5 | 3UTR | UGAGGUGAAAAAAAAAAAAAAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 15 for dataset GSM1084083
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_hippuristanol_rep2_SigmaAb
Location of target site ENST00000359236.5 | 3UTR | AGGUGAAAAAAAAAAAAAAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
184 hsa-miR-1306-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT089458 TET3 tet methylcytosine dioxygenase 3 2 2
MIRT167143 LHFPL2 LHFPL tetraspan subfamily member 2 2 2
MIRT290873 BCL10 B-cell CLL/lymphoma 10 2 2
MIRT320237 CYCS cytochrome c, somatic 2 2
MIRT462980 ZNF784 zinc finger protein 784 2 2
MIRT478039 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT479102 CNNM4 cyclin and CBS domain divalent metal cation transport mediator 4 2 4
MIRT482763 TMEM126B transmembrane protein 126B 2 2
MIRT489972 MCC mutated in colorectal cancers 2 4
MIRT495484 TNFAIP2 TNF alpha induced protein 2 2 2
MIRT496148 GPS1 G protein pathway suppressor 1 2 2
MIRT523370 GSR glutathione-disulfide reductase 2 2
MIRT526299 SORCS2 sortilin related VPS10 domain containing receptor 2 2 4
MIRT527427 NRL neural retina leucine zipper 2 2
MIRT527860 SMOC1 SPARC related modular calcium binding 1 2 6
MIRT529685 FBXL19 F-box and leucine rich repeat protein 19 2 2
MIRT531526 NOM1 nucleolar protein with MIF4G domain 1 2 2
MIRT532461 PLGRKT plasminogen receptor with a C-terminal lysine 2 2
MIRT532519 KCNN1 potassium calcium-activated channel subfamily N member 1 2 2
MIRT532668 APOBEC3D apolipoprotein B mRNA editing enzyme catalytic subunit 3D 2 2
MIRT532718 SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 2 2
MIRT533205 WAPAL WAPL cohesin release factor 2 2
MIRT536480 KIAA1549 KIAA1549 2 2
MIRT537158 GID8 GID complex subunit 8 homolog 2 2
MIRT539307 AKIRIN1 akirin 1 2 2
MIRT539569 CNKSR3 CNKSR family member 3 2 4
MIRT540045 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 4
MIRT540235 SAMD5 sterile alpha motif domain containing 5 2 2
MIRT543016 CRK CRK proto-oncogene, adaptor protein 2 2
MIRT551436 F2 coagulation factor II, thrombin 2 2
MIRT556146 MED12L mediator complex subunit 12 like 2 2
MIRT570714 DGKE diacylglycerol kinase epsilon 2 2
MIRT572037 GRWD1 glutamate rich WD repeat containing 1 2 2
MIRT572409 MRPS14 mitochondrial ribosomal protein S14 2 2
MIRT572660 AGMAT agmatinase 2 4
MIRT611450 NRIP3 nuclear receptor interacting protein 3 2 2
MIRT611601 JAKMIP3 Janus kinase and microtubule interacting protein 3 2 4
MIRT612208 TMEM109 transmembrane protein 109 2 2
MIRT612312 VSIG10 V-set and immunoglobulin domain containing 10 2 2
MIRT614146 MAFK MAF bZIP transcription factor K 2 2
MIRT617371 C21orf62 chromosome 21 open reading frame 62 2 2
MIRT617689 MAPKBP1 mitogen-activated protein kinase binding protein 1 2 2
MIRT618495 DENND5B DENN domain containing 5B 2 4
MIRT618802 SPATA21 spermatogenesis associated 21 2 2
MIRT619061 TTC4 tetratricopeptide repeat domain 4 2 2
MIRT619902 NPTXR neuronal pentraxin receptor 2 2
MIRT620080 DZIP1L DAZ interacting zinc finger protein 1 like 2 2
MIRT622233 SLC25A45 solute carrier family 25 member 45 2 2
MIRT625262 ZNF566 zinc finger protein 566 2 2
MIRT625725 CXorf38 chromosome X open reading frame 38 2 2
MIRT625813 POFUT1 protein O-fucosyltransferase 1 2 2
MIRT625839 NXPE2 neurexophilin and PC-esterase domain family member 2 2 2
MIRT626024 XRCC2 X-ray repair cross complementing 2 2 2
MIRT626054 PDE4C phosphodiesterase 4C 2 2
MIRT626082 CWF19L1 CWF19 like 1, cell cycle control (S. pombe) 2 2
MIRT626356 PACS1 phosphofurin acidic cluster sorting protein 1 2 2
MIRT626790 KCNK6 potassium two pore domain channel subfamily K member 6 2 2
MIRT627797 RAB11FIP1 RAB11 family interacting protein 1 2 2
MIRT628234 FAM212B family with sequence similarity 212 member B 2 2
MIRT628241 FADS1 fatty acid desaturase 1 2 2
MIRT628249 ETF1 eukaryotic translation termination factor 1 2 2
MIRT628799 A2ML1 alpha-2-macroglobulin like 1 2 2
MIRT628879 FAM177A1 family with sequence similarity 177 member A1 2 4
MIRT629333 ZNF487P zinc finger protein 487 1 1
MIRT629435 RPL34 ribosomal protein L34 2 2
MIRT629977 MRPL36 mitochondrial ribosomal protein L36 2 2
MIRT630727 FPR1 formyl peptide receptor 1 2 2
MIRT630776 MSANTD3 Myb/SANT DNA binding domain containing 3 2 2
MIRT631074 ZNF829 zinc finger protein 829 2 2
MIRT633139 C6orf132 chromosome 6 open reading frame 132 2 2
MIRT633178 AGO3 argonaute 3, RISC catalytic component 2 2
MIRT633510 RNF14 ring finger protein 14 2 2
MIRT633613 APCDD1 APC down-regulated 1 2 2
MIRT633668 MYO1F myosin IF 2 2
MIRT633707 LRRC8B leucine rich repeat containing 8 VRAC subunit B 2 2
MIRT633798 SOX7 SRY-box 7 2 2
MIRT634203 TMOD2 tropomodulin 2 2 4
MIRT634297 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT634509 NYAP2 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 2 2
MIRT634518 NKAP NFKB activating protein 2 2
MIRT634754 CRCP CGRP receptor component 2 2
MIRT635741 IFNAR1 interferon alpha and beta receptor subunit 1 2 2
MIRT636480 KLHL7 kelch like family member 7 2 2
MIRT637042 FITM2 fat storage inducing transmembrane protein 2 2 2
MIRT637748 POLR3K RNA polymerase III subunit K 2 2
MIRT638568 IFNE interferon epsilon 2 2
MIRT639155 TMEM167A transmembrane protein 167A 2 2
MIRT639848 ZBTB20 zinc finger and BTB domain containing 20 2 2
MIRT641770 ZNF207 zinc finger protein 207 2 2
MIRT642285 ZNF99 zinc finger protein 99 2 2
MIRT642685 KRT74 keratin 74 2 2
MIRT643530 ERAP2 endoplasmic reticulum aminopeptidase 2 2 2
MIRT643742 ZNF284 zinc finger protein 284 2 4
MIRT643945 WIPF3 WAS/WASL interacting protein family member 3 2 2
MIRT644320 NFKBID NFKB inhibitor delta 2 2
MIRT644383 ZNF286A zinc finger protein 286A 2 2
MIRT645130 HES2 hes family bHLH transcription factor 2 2 2
MIRT645607 PCDH11X protocadherin 11 X-linked 2 2
MIRT647121 ZNF446 zinc finger protein 446 2 2
MIRT648484 CMBL carboxymethylenebutenolidase homolog 2 2
MIRT648549 BBS5 Bardet-Biedl syndrome 5 2 2
MIRT649252 TRIM65 tripartite motif containing 65 2 2
MIRT649468 SLC10A7 solute carrier family 10 member 7 2 2
MIRT650013 KLB klotho beta 2 2
MIRT650068 CCDC134 coiled-coil domain containing 134 2 2
MIRT650325 RTN2 reticulon 2 2 2
MIRT651093 ZNF516 zinc finger protein 516 2 2
MIRT651265 ZKSCAN4 zinc finger with KRAB and SCAN domains 4 2 2
MIRT651272 ZKSCAN1 zinc finger with KRAB and SCAN domains 1 2 2
MIRT651402 ZBTB16 zinc finger and BTB domain containing 16 2 2
MIRT652163 TRIM66 tripartite motif containing 66 2 2
MIRT653153 SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 2 2
MIRT653477 SLC4A1 solute carrier family 4 member 1 (Diego blood group) 2 2
MIRT653922 SERPINC1 serpin family C member 1 2 2
MIRT654243 RNF115 ring finger protein 115 2 2
MIRT655354 PCDH11Y protocadherin 11 Y-linked 2 2
MIRT655958 NDST1 N-deacetylase and N-sulfotransferase 1 2 2
MIRT656318 MESDC1 talin rod domain containing 1 2 2
MIRT656578 LSM10 LSM10, U7 small nuclear RNA associated 2 2
MIRT657210 IKZF2 IKAROS family zinc finger 2 2 2
MIRT657856 GJB1 gap junction protein beta 1 2 2
MIRT658207 FBXO44 F-box protein 44 2 2
MIRT659003 DIAPH1 diaphanous related formin 1 2 2
MIRT659349 CSRP1 cysteine and glycine rich protein 1 2 2
MIRT659501 CISD3 CDGSH iron sulfur domain 3 2 2
MIRT659761 CCDC171 coiled-coil domain containing 171 2 2
MIRT660149 BRD4 bromodomain containing 4 2 2
MIRT661582 EPHX2 epoxide hydrolase 2 2 2
MIRT661753 ATM ATM serine/threonine kinase 2 2
MIRT662223 CCRL2 C-C motif chemokine receptor like 2 2 2
MIRT663883 CXorf56 chromosome X open reading frame 56 2 2
MIRT664308 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT664649 GALM galactose mutarotase 2 2
MIRT664671 L2HGDH L-2-hydroxyglutarate dehydrogenase 2 2
MIRT665050 C3 complement C3 2 2
MIRT666467 SCRG1 stimulator of chondrogenesis 1 2 2
MIRT666529 RNF170 ring finger protein 170 2 2
MIRT669118 CDC42BPG CDC42 binding protein kinase gamma 2 2
MIRT669311 C17orf75 chromosome 17 open reading frame 75 2 2
MIRT669358 BHLHE22 basic helix-loop-helix family member e22 2 2
MIRT669691 ABLIM1 actin binding LIM protein 1 2 2
MIRT674223 FAM120AOS family with sequence similarity 120A opposite strand 2 2
MIRT674766 QRSL1 glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 2 2
MIRT675207 ZNF554 zinc finger protein 554 2 2
MIRT675271 ZNF431 zinc finger protein 431 2 2
MIRT676265 PBOV1 prostate and breast cancer overexpressed 1 2 2
MIRT676573 VSIG1 V-set and immunoglobulin domain containing 1 2 2
MIRT677566 C19orf52 translocase of inner mitochondrial membrane 29 2 2
MIRT677631 ALG1 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase 2 2
MIRT678115 MICA MHC class I polypeptide-related sequence A 2 2
MIRT678694 RNF157 ring finger protein 157 2 2
MIRT679583 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT679621 MED28 mediator complex subunit 28 2 2
MIRT683700 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT683721 LACTB lactamase beta 2 2
MIRT690967 APOL1 apolipoprotein L1 2 2
MIRT691611 IPP intracisternal A particle-promoted polypeptide 2 2
MIRT702524 KCND3 potassium voltage-gated channel subfamily D member 3 2 2
MIRT704762 CDKN2AIPNL CDKN2A interacting protein N-terminal like 2 2
MIRT708738 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT708898 SKIDA1 SKI/DACH domain containing 1 2 2
MIRT709965 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT710373 GM2A GM2 ganglioside activator 2 2
MIRT710533 TMEM201 transmembrane protein 201 2 2
MIRT710582 HLCS holocarboxylase synthetase 2 2
MIRT711030 MBOAT2 membrane bound O-acyltransferase domain containing 2 2 2
MIRT712200 SHROOM4 shroom family member 4 2 2
MIRT713798 CPLX2 complexin 2 2 2
MIRT714096 ZNF486 zinc finger protein 486 2 2
MIRT714923 PPP1R12C protein phosphatase 1 regulatory subunit 12C 2 2
MIRT716518 TNPO2 transportin 2 2 2
MIRT716701 HLA-B major histocompatibility complex, class I, B 2 2
MIRT717070 MTMR6 myotubularin related protein 6 2 2
MIRT719561 CBL Cbl proto-oncogene 2 2
MIRT719688 ALDH1L2 aldehyde dehydrogenase 1 family member L2 2 2
MIRT720134 RIMKLA ribosomal modification protein rimK like family member A 2 2
MIRT720222 IPPK inositol-pentakisphosphate 2-kinase 2 2
MIRT720982 METTL21A methyltransferase like 21A 2 2
MIRT723821 PDS5A PDS5 cohesin associated factor A 2 2
MIRT723999 LMTK2 lemur tyrosine kinase 2 2 2
MIRT724963 PTK6 protein tyrosine kinase 6 2 2
MIRT725217 PEA15 phosphoprotein enriched in astrocytes 15 2 2
MIRT725262 PARVB parvin beta 2 2
MIRT755883 METTL14 methyltransferase like 14 3 1
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-1306 Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)
hsa-mir-1306 Fluorouracil 3385 NSC19893 approved resistant cell line (KYSE)
hsa-miR-1306-5p Imatinib 5291 NSC743414 approved resistant High Chronic Myelogenous Leukemia tissue
hsa-miR-1306-5p Paclitaxel 36314 NSC125973 approved sensitive cell line (HS578T)
hsa-miR-1306-5p Doxorubicin 31703 NSC123127 approved sensitive cell line (HS578T)
hsa-miR-1306-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-1306-5p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)

Error report submission