miRTarBase - #MIRT614923


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pre-miRNA Information
pre-miRNA hsa-mir-3152   
Genomic Coordinates chr9: 18573306 - 18573379
Description Homo sapiens miR-3152 stem-loop
Comment Berezikov et al. proposed this sequence as a miRNA candidate based on the RAKE method .
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3152-5p
Sequence 11| AUUGCCUCUGUUCUAACACAAG |32
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1019691326 2 dbSNP
rs1282676806 8 dbSNP
rs762305650 11 dbSNP
rs1364318615 12 dbSNP
rs556364307 18 dbSNP
rs1002755159 19 dbSNP
rs1238555909 21 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol MARCH6   
Synonyms DOA10, MARCH-VI, RNF176, TEB4
Description membrane associated ring-CH-type finger 6
Transcript NM_005885   
Expression
Putative miRNA Targets on MARCH6
3'UTR of MARCH6
(miRNA target sites are highlighted)		 
>MARCH6|NM_005885|3'UTR
   1 AGTAGTTGTCTCAACAACTTGACCTTCCCCTTTACATGTCCTTTTTTGTGGACTTCTCTCTTTGGAGATTTTTCCCAGTG
  81 ATCTCTCAGCGTTGTTTTTAAGTTAAATGTATTTGACTTGTGTTCTCAGCATTCAGAGAGCAGCGGTGTAAGATTCTGCT
 161 GTTCTCCCTGGATCTTCTGACATTACTGCTGTCTGAGATTTGTATATGTGTAAATACAAGTTCCTTGATACCCTAAAACC
 241 TTGGATTAAACAGAATGTGCATTGTACATCTTTAAACAAAATGTATATTAATTTATTAAATCTAGTTGTCACTTTATTTT
 321 GGACCTGCTGTGATCTCGACAGGAAACGTGCCACAGAGCAGTAGTGCGCAGGCAAGACTTTTCAGTGACGCCTTGTGGAA
 401 CGCAGTTCATGATGTCCTAGCAGCTCTCACTAAGGGAACTGTACATTCTTTCTTTCTTGGCTATTCAGACCTTACCAAGA
 481 ACGTTAAAGGAAACAAGTAGAAATCAGCAGTGGAGTGTCTGTGGTAAGAAAACATGAACTTTATGCTTCACTGTTAGTTG
 561 TTTGTGGAAGTTATTTTGTATAACACCAAAGCTGTTGTACATTTCCTACTGCCTGATTTTTTTCATGTGTCTGTGTTTGT
 641 AATATTGTATAGTATCTTGTGCTAGGTGAGGAAATTATTTTTAATTTTGATAATTTAATATTCCTAGTGTGATCAGCATT
 721 GGGAGTTGGGTTTCAGTGGGGCATGTCTATACTTAGAGAAAAAAAGTCCAAATGAAGATTTTCATGAGTCAGCCCCCCCG
 801 CCCGCCCCCACCCCACACCCACATCCTCTCTTTTCCACACACAACTATCTGTTTATTTTTTGTAGCAGTGGCCGAAAGTC
 881 CTGCAAGGTCATAAATCTTTCAGAGTGACATCACCAACTGTACTGCATCTTACTGGATTTAGGACTTCTGAGATGCTTGT
 961 GAAGTATAGATGTGGTTGTGGTCTTAGATTGACAGCATTAGAGAAGACTGGTTAGAACATCTGGTCTCGCTGGTTAGTGC
1041 CTCGTTGGCTGAGGACTAGGTGTGCATTTCTCCTAGCTTTTCATCAGGAAATCCCAAAGTTTCCAAAGCTTTTTGTTTAC
1121 AGAATAAAACTTCAAATAAAACCAATTCATTATTTGTCCAGAAGGAAGCTTGGCTGAGCTGGCCTTTTAACATAGGAATG
1201 TATTTCGTTGGAAACATTCTGAAAAATCTCAGAGAACTGAACCCTTACAAACTTTGTTTTCCCTCATAACCAAAGCTTCA
1281 GGTTAGAAGTTTAGAAAAATAGAATGGTTGGGTACATGATCTAAATGTTTAATGCTAAAGGTATATCGTAAGGGTAGTGT
1361 TTGTTTTTGAACGATAATTTAGAAGTTCTCATAGAAAGCGTATAACATAGGTCTTCAGAAACTATAAAAGAATTTTCATA
1441 TAGTATTAAAATCCATAGACTAAAATCTGAGAATTTTTTAACATATGCAAGTCAGCCAAACATAAGCTACCAAAATAAAG
1521 AGCAATGTGTTCTGGCTGTTTTATACTTCAACAATTTTTTCCCTAAGTGGTAAGCAATTACTTTAAAACATATTTTTAAA
1601 AACATCGGTATCGGGAGCTGCGGTGGCTCCGGCCGGTTGTCCTGGCACACAAGGAGGCGAGGCTATGCGTTCGAGGCCAA
1681 CCTAGGCAAAATTGGAAAAAAAAAAAAAAATCAGTATCAGAAATAATGCTTGACATAGGATTCAGTGTTATACTCTTTGG
1761 CACTTTAGAGCAGCCTTTTCTCTCATTTGAAATAAGGTCTTTGTTAGCCCTACCTTTACTCAGAAATTTAGTCCTACTAT
1841 AAAAAATTAGGATTTTAAAATATAATGCTGCCTGTCATAGTGTATTTCTAAATTGCTCTCTTTGGGAGAAAAACATTATT
1921 ATTGAATTGAGCATATAACTATATAACTATATAACTATATATATATATATATATATATATATATATATATATATATATAT
2001 ATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCCCCCGAGACAGAGTCTTACTCTGTTGCCCAGGCT
2081 GGAGTGCAGTGGCACGATCCTGGTTCACTGCACCCTCTGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAG
2161 TAGCTGGTACTACAGGTGCGTGCCACCACACCTGGCTTATTTTAGTTATTTTAGTAGAGATAGGGTTTCACCATGTTGGC
2241 CAGGCTGGTCTCGGAACTCCTGACTGCAGGTGATCCGTCCTCCTTGGGCTCCCAAAGTGCTGGGATTATAGGTGTGAGCC
2321 CCCACGCCTGGCCAACTTGATTATATTAATTTTGGGTTTTTTGTTTTGTTTTGTTTTGTTTTTTAATTTTTCAAAGAATT
2401 TGTGGATCTTGGTATAAAGTCATTGGAACATATCTGTTTTAACAGCAAGAGATCCTAGGCAGATACTTCAAAAGGTTAAA
2481 AATTCTTAATCCTACAGAATTTTAAATGAATCTTATCAATGTTTTGTAAACAAACAATATGAATGGCCAAAAAATTGCCC
2561 TCCATTTTACTGGCAGGTAATTTATATTGTCTTACTTAAGAATTCTCCCCTAGTTTTTCAATTGTACTTTATCGTGTTGT
2641 TTTCAATGAGATAAGTATTTTCATAGGGAAAGCATTTTCCAGCATAATATTTGCTTGGGTAGCATCCGGGTTTTAGTATT
2721 TAACCAAGAGCCTTTTAAATATTGAAAACCCATAGTTCAGAAAATGTTAGTATTGCTGCCCTTCTTCACATAAATTTTTT
2801 TTTAAATTATACTATTATTTTGCTTAATTTTATATTGGGTTAAAACAACCTTCAAGAAGGTTAACTAGGAAAGAAGACCT
2881 TTTTGTTTTATTTTTACTATTTATATATAGAAGACAAATCAGCATTTGGTGATAGTTTTACATGACCAGTTATCAAACGG
2961 TCATAGTATGAAGTGTGCAGTTGTTCATTATTAGTAAATTATGTTTGATTTTTAAACTATTTAGTACTAATAGTTGAGAT
3041 GAAAACTGAAGAAAAATGCCAATGTGACGTTTGTGTATAGCTAGCCTTAAAAAACTTCCCATGTTTTTAGGTGACTTTTT
3121 TCCCCCTCTTAGTACTCTGGAGAAACAATGAAGATGGGCCATCTCAATTCCAGATGTAAACAAAAAGTAATTTTTATTTC
3201 AACATTTAATGTAACTGCTATTATTGTGGATTCTTGTCTTGTGTATTTTCTTTCCCTTATTCAAGTAATATAGAATAACT
3281 TTCCTTAAAATGATTTGATCCAAGATACGTCATTTCTGTATTGGCAAAATGCCACTATTAAAGTGTAATTCTTGAATTTA
3361 GGTTGAATTGATGACTTTTTAAAACAAAACAAACACTGGACAGTTCTACATTGTATTGCGTTTGCGAATGTGCGTGAACA
3441 CACGCACACGTGCAGGAGAATGTAGTGCCATAAGAACACTGGCGCTTTTTAAAACTTTCCAAGCTAGCTACTTATTTTCA
3521 TTTTCAGGGTTGAGTACTCTAAGCTCTCTACTTACTGTGAGAAGTTTTCTACATTGTAAAATTAAAAGATTATATTTAAA
3601 ATACTTCTTTAGGATGTTATTCAGCCATCAAAAAAAAACCCAACTAAAATGTCTTACCAGTAAAGTATTATTAAAAGCCT
3681 CATTTGTGGAGATTCGCTGACTTCCTTGGTTAAGCTGTCTTGTATTTACTTAATTTGTCCCCTCAACCAGGTGTTTTCTT
3761 TTCAGCCTGTTACTGTCCTGTGCCATTTTTAAAAATAGCCATCATGAGTAAGGGCTTCTTTAAAATAATCCCTGACAATA
3841 TCTTTGGCATTAATACGACATAAAGACAAGACAGTATATGTATGTTTTCATTCCTGTTTTGTACGAGTGCCTCATTTTGT
3921 AGTCATGAAAGTAACATAGTACCTTAAATAAAAATGTAATGACTAATCTAAGGTCTAGGAATAACTATTGTAGAAGCTAA
4001 GTAGAACACTTAGTTTGGGGTGTCAATTTTCTATCAACGCAAACACCTTAGGGTACCCAGACCAATTTTATGTATATATA
4081 TTCTGAAATGCTCCCTTTTTAATGTGGTCATTTGTTGCCTTCTAAGTTGAGAGGACAAAACTGAATAAAGTGAATGTTAA
4161 TTGTAGTCTAGTTTTTTTGTTTGTTTTTGTGTTATTGCAAGATTGCTTTAAGATTGCAGAAATATGCATTATTAGCCAGC
4241 ATAGATAATCCAGATGTTATAATAGGAAGGAAAAACAACTCCAGTTAAATGTGACTGTGGCGACTCCCTTTTATGTATAC
4321 ATTTAAATGCATAGTTGCAGAGGACACATCCCTCCCCTTCTGTCTCCCTAACTTGAACTGTAGACCGTCCTCACTGGGAA
4401 GAGTAAGGCCCCACATTTTGTGCAATAGCAAGCTACTGCCCACTTCTGCATGTCTGCTACGAGATCAGAAAGTCAGTTTC
4481 ACTAAGGTTGTCTTTTAGCTGAATACTTAGAGTAAAACCAATCAAATCCATTGTACATACCTGACCATATGTCCCAGATA
4561 AAAAGGAAAGACTTGCGTGATGTTTTTTTCCTTCTGAGTGCCCTGAGGAGATCCTTTTGCTTCAGACTATTTCTAATTTT
4641 TCTTTGTTTATAGGTTCAGAATTTTTTCCATGATTGTTTTCCCCCAAACAAGTGCATTTTTAATTACTTTAAATGCAGGG
4721 GTGATAGAGGAAATGCTATTCGAACCATAGACATCTTTAATCTGTGAAGCTGAAATTTTTCAGCAAAGGAAATTGCATGG
4801 TCAAGTTCAGAAACTGGCCATTAATTTCCCCCTTCCGCTCCACAGTTCATAGCTACTCTTGTTGCAAACATGTAGTGATA
4881 AGGAGAACTAACGTATCAAGGGGCTGAGAGGGTAACGTTCCCCTCCTCCTCCATGTTTTTATTTTGGTGTCTGTTTTGTT
4961 TCTAGCACTGTATTTAGTACTGTAGTTGAATGAGGTATGATGTCTCCCTTCAAGGAACTCAGAATGGAACAGAAGCATGA
5041 GCAAAAGATTGTATTACAGAGGTATGAATAAAATGCCATGGGGAACACAGAGAAAGGTTCACCCGGGAGAGATGGCCTAG
5121 CCACTTCCTTAGTGACTGTTTGGTATATGTAGGTCCCCCTGCCATTACTCTTTCAGCCTTCTGCAATCTAGTTCTACTTA
5201 GTCACACACTTCTCTAAGACCACTCATACGTAAACACTACGTAGAGGCCCCTTTTTGCCTCATTTTACATTGTTTAGTTA
5281 TCATTTTGAAACTTTTCTTCACATATGTAACAGTGCCGGAGTTTTTCTGCTTCTCTGTGTTTGTTCAGTAACTCTTCTTT
5361 AGGATACACCTAAAGATGAGAAGCTTCATACCCAGTACTCCTCTTCATTCACTCATATGTTTTTGGGATCAGTCCCTTCT
5441 GCTGGCTGTGCATTGGTCTAATGGAACAGAATAGAGTCCAGAAATAACCCAACATGTATGTGGACAACTGGTTTTTGACA
5521 GAGGTGCAAAGGTCTTGAAAAAATGATGCTGGAATAATTGGGCATCAGATGCAAAATTAAAAACAAATTGATCCATATCT
5601 TAACACTGGCAAAGATTAAAGTCCAAATGGATTATAGTTCCCCAAAACTGTATAATTTCTAGAAGACAACAAGGAAAACG
5681 TGTTCAGCCTTGGGTTAGGAAAAGATTTCTTAAATCCAACACCAAAAGCACAATCCATGAAGGAAAAATCGATAAATTGT
5761 ACTTTATCAAAATTGAGAACTTCTCTTTGAAAGGTACCATAAGGAGAACAAAAAGACAAGCTGTAGAGTGGCAGAAAAAT
5841 ATTTGCAAAACATTTCTGATAAATGAGTTGCATCTAGATTACATAAAGAAGTCTCAAAACTGAACAAGTAAACCCATTGT
5921 TTACTTAATCGCTGTTTCTCCTGAGCTTGCTGCCTCTGCCCCTGCTCTCTCTCCTTTTCCATTTGTTTTCAACATTGAAT
6001 CCAGAATGTTCTTCTTGAGATCCAAGTCAGATCACACCAACCCTCAGAACTCTCCAATAGACGACCATGGCACTCAAAAG
6081 TCCACAATAGCCTTCAATGCTGGGCAAAACATGAAGCACCCCTTTTCTCCCTTCTCTGACCCCATCACCTCTGTGTTCAC
6161 CCTGCTCCTGCCGTCCTCCCTGCCTCCAAAACAGGTCAGGCCTTCGTGCCTTTGCACTTACTATTTGCAATACCCAAATG
6241 TTCTTCAGGCTCTTTAGCCTCTTCATTTCTTTCCTGAAGTGTCATTCTCACTGAGGCTTATCTAAAGCTGCAGCTACTGG
6321 GGCATTCCTGTCTCATCTCCCTGCTGTATTTTGTACTCCCGGCTCTCTTTTGTACTTTTAAACATACTATATGGTTTACC
6401 TTTGTTGTTTATATTTGCATGTTGTTTCCCACTTGAATGTAAGCTCCAAAGATTTTATTTTTTTAAACTGAATTATTACT
6481 GTATTCCCAGAACAATTCCCTGGCAAATATTTGGTACTCAATAGTAATGCTAAGTTAGTAAATAAATGATGAATTTAGAA
6561 TCAAAATAATGTGTCTATGGCCAAAATAAAACCTGAAATCCCTGTCCTATTTCCCAGAGGTAACTGCTGTTAATAGTTTA
6641 GTTGTGTGCTTCCAGACATACCTTCACAGAATCATTTATCACAATAAAGGTGTCATACTATGCAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' gaACACAAUCUUGU----CUCCGUUa 5'
            |||  |:| |||    |||||:| 
Target 5' gtTGTCCTGGCACACAAGGAGGCGAg 3'
 1636 - 1661 142.00 -13.30
2 
miRNA  3' gaacacaaucuuGUCUCCGUUa 5'
                      ||||||:|| 
Target 5' tgtcctatttccCAGAGGTAAc 3'
 6603 - 6624 134.00 -10.80
3 
miRNA  3' gaACACAA--UC---UUGUCUCCGUUa 5'
            || |||  ||   |||  |||||| 
Target 5' taTGCGTTCGAGGCCAACCTAGGCAAa 3'
 1664 - 1690 130.00 -9.40
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31499960 22 COSMIC
COSN30169299 24 COSMIC
COSN14132683 74 COSMIC
COSN23323830 79 COSMIC
COSN30139089 181 COSMIC
COSN31524062 246 COSMIC
COSN31488212 277 COSMIC
COSN31576997 328 COSMIC
COSN26636076 571 COSMIC
COSN31545320 599 COSMIC
COSN19656235 805 COSMIC
COSN31606533 1223 COSMIC
COSN31520127 1235 COSMIC
COSN31539297 1251 COSMIC
COSN24301226 1348 COSMIC
COSN31544688 1385 COSMIC
COSN26554532 1492 COSMIC
COSN31534456 1533 COSMIC
COSN20384024 1635 COSMIC
COSN9249045 1693 COSMIC
COSN25844101 1696 COSMIC
COSN27466138 1711 COSMIC
COSN2056757 2207 COSMIC
COSN28239718 2334 COSMIC
COSN15187217 2399 COSMIC
COSN26470926 2919 COSMIC
COSN5066300 3317 COSMIC
COSN5808896 3445 COSMIC
COSN20635585 3448 COSMIC
COSN16374413 4034 COSMIC
COSN24373163 4119 COSMIC
COSN24373164 4120 COSMIC
COSN30144541 4120 COSMIC
COSN9249060 4151 COSMIC
COSN21912095 4544 COSMIC
COSN5066309 5172 COSMIC
COSN19342296 5414 COSMIC
COSN24990779 5427 COSMIC
COSN2056788 5902 COSMIC
COSN14508068 5940 COSMIC
COSN16752326 5954 COSMIC
COSN5066313 6563 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1305866960 5 dbSNP
rs1239554861 9 dbSNP
rs1238179363 10 dbSNP
rs775305981 11 dbSNP
rs1345371812 13 dbSNP
rs112962671 27 dbSNP
rs1335426660 31 dbSNP
rs1212338036 35 dbSNP
rs1393513635 37 dbSNP
rs917464191 39 dbSNP
rs374571506 41 dbSNP
rs772832633 42 dbSNP
rs1376692902 55 dbSNP
rs977446389 59 dbSNP
rs752723806 69 dbSNP
rs1025854833 74 dbSNP
rs532578614 79 dbSNP
rs773743783 80 dbSNP
rs1344822179 84 dbSNP
rs984091319 86 dbSNP
rs1285115324 88 dbSNP
rs1486621813 91 dbSNP
rs779142248 92 dbSNP
rs948139061 103 dbSNP
rs1261592122 105 dbSNP
rs899926824 107 dbSNP
rs547153194 108 dbSNP
rs927823161 112 dbSNP
rs1293087943 117 dbSNP
rs1415894816 122 dbSNP
rs552484206 132 dbSNP
rs1051615290 135 dbSNP
rs1486604183 137 dbSNP
rs117046686 145 dbSNP
rs1052786812 146 dbSNP
rs1456174637 152 dbSNP
rs1009135814 154 dbSNP
rs892350521 163 dbSNP
rs1188426325 167 dbSNP
rs534515300 168 dbSNP
rs1476106838 170 dbSNP
rs1489635636 182 dbSNP
rs1260951950 183 dbSNP
rs548320880 188 dbSNP
rs1202275741 190 dbSNP
rs1262658016 196 dbSNP
rs77353977 201 dbSNP