pre-miRNA Information
pre-miRNA hsa-mir-6867   
Genomic Coordinates chr17: 40193597 - 40193663
Description Homo sapiens miR-6867 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6867-3p
Sequence 47| CUCUCCCUCUUUACCCACUAG |67
Evidence Experimental
Experiments Meta-analysis
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSM7811173 21 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1403216522 1 dbSNP
rs781776276 3 dbSNP
rs202050374 4 dbSNP
rs367842831 5 dbSNP
rs1223489976 6 dbSNP
rs907256096 9 dbSNP
rs753257137 14 dbSNP
rs757843554 17 dbSNP
rs371369162 18 dbSNP
Putative Targets

Gene Information
Gene Symbol CLUAP1   
Synonyms CFAP22, FAP22, IFT38
Description clusterin associated protein 1
Transcript NM_015041   
Other Transcripts NM_024793   
Expression
Putative miRNA Targets on CLUAP1
3'UTR of CLUAP1
(miRNA target sites are highlighted)
>CLUAP1|NM_015041|3'UTR
   1 CCCTTTTGCCAAGGGACCCTGGCAGATTAAAACCCTCAGACTTGTAGGTAAATGGGAACTTAGAAGGTTAGGAAGGTAAC
  81 CCCTGTTTTGTTTACTAAGCTGGCTGGACTCATGATCACTGAAGCAATACTTATTTCTGCTTTAGCCTCCTATGTTTGCA
 161 TTCCATGAAGCTTAAATAAGAATTGAAGCAAATCCCTAAGATTTATTTTTTTCCACCTTATTTATCTTCTAAAACTTGAG
 241 GAATGCATGTGTTCTTAGTGATTCACATCCACGGGACAAAAACTCAAGAAGAAATAAGAGCTGACGCCACACAAGTCTTG
 321 GCTGCTTTTGTTACTATACATTTTCTCTGAGACTCCAGCAGAGTTGGGGCTGGAACTTGGCACTGGGGACTCATGTTTGG
 401 AATCGTAGGGGAACATCTGGCTGTTAATCACTTGCACAGTTGAGAACATTTCCTATACATCGGCTTTTAATTCTAGCTCT
 481 TATTTCATTTTGTAATCTTATTTTCTTTCGTCTGCATGTTCACAATACCAAGCATTAAATGTATTTTAATAACTAAACTT
 561 TTCTGAAAGAAGGTTAGCTAAAGTTAAATGAAAACTTGGTTTCTTTGAAAATCAGGCAATAGAGACAGGCTCCAGATGAG
 641 GAATCCTCCATTTTCTGTCCGAAGCTGACATTCCTCTGGCAGTCCAGTTCACCTTGGATTACAGCCACCTTCATGTTTCC
 721 ACGGTTGGTACTAAATCTGGAAACTCTGGTGACCTGGGCTGCCCTCTCAGAAACTCCAGACTCCCATGGCAATGACAGCC
 801 GGGACACTTTTCTTCCCTCCAGCCAGGGTTTCTCTAAAGGAGCTTTGTTTTGTCTAAAGTGTGGCAAGACATAGTGCACA
 881 ACACAGGGACAAAGGCAGGTTTCCTGCAGCTCGCTACCTAAGTGTTTCTGTAGGGGAAGGAGCCAATTAAGAAAAAGTGT
 961 TGGTACAGATTCATGTTTCTGATTTAAAAAAACAACAACACAGGATTGAATTAAGTAGAGTAATAGCACTAGAAGAATTT
1041 TTCTGTTGTGAAATTAGAAGTGGAGTTGGTTTTTTTCTTTTTTCTTCTTCTTTTTTTTTAATATGAAAAGTACTTAGCTG
1121 GGAGTGGTGGCAAGCGCCCTTGGGTCCAGCTACTCAGGAGGCCAAGGTGGGAGGATCACTTGAGCCCAGGAGTTTTAGAC
1201 TAGCCTGGACAACTAAGTGAGACTCCATCTCTACAAAAAATTAAAAAATTAGCCAGGTGTGGAGGGGCATGCCTGTGGTC
1281 TCAGCTATTCAGGAGGCTGAGGCAGGAGAATCACTTGAGACCAGGAAGTTGAGGCTGCAATGAGCCGTGATCATGCCACT
1361 GCACTCCAGCCTGGGTGACAGAGTGAGACCCTGTCTTTAAAAAAAAGAAAAAGAAAAGCACGCTGCTTGTAAAAAGCGTA
1441 CAGTAGGTCAGGCGTGGTGGCTCATGCCTGTAATCCTAGCACTTTGAGAGGCTGAGGTGGGTAGATCACCTGAGGTCAGG
1521 GGTTTGAGACCAGCCTGGCCAACATGGCGAAACCCCACCTCTACTAAAAATACAAAAATTAGCCGGGCGTGGTAGCGCAT
1601 GCCTGTAACCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTAGGAGGCGGAGGTTGCAGTGAGCCGAGA
1681 TGGCGCCACTGCACTCCAGCCTGGGCAGCAGAGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAGCATACAGTAA
1761 ATAAAAAAGCACAAAACAGTTTTCACTTATTTTACAATTAAAAAGTCAGAAGACTTCTGAAGTTACTTATCTTTTAATAC
1841 ATGTATTTAACACCATACTTCATATTATTAAATAGGTTTTACTTAAAAATATAATTATTGTATTTGTACCTGTCAGATAT
1921 AAATACTTATTCAGGAGTTCACAGGTACGAAAAGATACACATAAATTTTAGGAACTTTTGAGTTATTTCTGTCATTTTTG
2001 CTTTTTTCTCTTTCTTTTCCTAAATTTTATGTATAAGATTACCCCTAAAAAAAAAAAAACAGCCAGTATTCAGTGAATTC
2081 ACCAGTAATTTGAAATGCACCATATTGTAAATGATCCACTGACAGGGAAGCCAGCGTGTTGGAGCCATGCCAGCCACCTC
2161 AGACACCGTGGCTCTAAGATGCGGAAGAGTCACTGCATCTTCTTGAATGTTACAGATTTGGTTTGCCTGAATGTGACTTG
2241 ACTTCTGTTTTGAAAAAACATACGAATAGAGTTCTATTTTCCTTATGTGATGCTTTCTTCTAACACACTTTAACACAGAA
2321 GCCTAACCTAGCTACAAAGAGCCTATCCACAGACATAGGCAACAGCTCCAAAGGGTATTTCATTGTGTCACCTGCTTCTA
2401 GATCATCTGTTAGTTAACTGACTTTGTGCAAGGTCTCACCATGTATAGCACTGCCTTGCTTGAGCACGGAAGTTTCTGTC
2481 AACAGCAAGCTTTATGTGCTCTATCATTTTTATTAAAGTATTTCAGTCAATAGTGACCCATTGTAGAATGGATGCAGGAT
2561 TCACATGTGCAAGTGCTTTGTGACCTGGCACCATTTGGTTTTGGCCAAGCAGCAGAGCAGACCTCAGGACCTAACGAGGA
2641 TGGTTGTGATTAGGTCAAATAGAAAACTAGCAGGCCATTGCTGACAATTTTTACTATATAATTAGAGGACTTCCTAAAAT
2721 GCTTTAAAAAAAAATGTGTATGGATGGAAAATACAAAGGAATTTTTCAAATACTCAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' gaucACCCAUU-UCUCCCUCUc 5'
              |||||:| |||| |||| 
Target 5' agccTGGGTGACAGAGTGAGAc 3'
1368 - 1389 141.00 -16.60
2
miRNA  3' gaucACCCAUU-UCUCCCUCUc 5'
              |||| |: |||| |||| 
Target 5' agccTGGGCAGCAGAGTGAGAc 3'
1698 - 1719 133.00 -12.40
3
miRNA  3' gaUCACCCAUU-UCUCCCUCUc 5'
            ||||   || | ||||| | 
Target 5' atAGTGCACAACACAGGGACAa 3'
871 - 892 123.00 -8.68
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN20078710 9 COSMIC
COSN30448240 36 COSMIC
COSN19727390 37 COSMIC
COSN26971062 76 COSMIC
COSN23086682 84 COSMIC
COSN30184715 103 COSMIC
COSN31611759 116 COSMIC
COSN30153871 122 COSMIC
COSN31572825 146 COSMIC
COSN15658365 315 COSMIC
COSN24157713 481 COSMIC
COSN6084874 511 COSMIC
COSN5406831 649 COSMIC
COSN30379427 661 COSMIC
COSN5857286 724 COSMIC
COSN4765254 779 COSMIC
COSN8391443 781 COSMIC
COSN17182216 863 COSMIC
COSN26741591 952 COSMIC
COSN6084875 1312 COSMIC
COSN15597287 1436 COSMIC
COSN5800509 1534 COSMIC
COSN4765255 1689 COSMIC
COSN27198034 2060 COSMIC
COSN27431610 2060 COSMIC
COSN28012067 2061 COSMIC
COSN23509622 2137 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs145278481 3 dbSNP
rs776986723 9 dbSNP
rs1415827579 12 dbSNP
rs762474201 13 dbSNP
rs1207024572 14 dbSNP
rs770248966 16 dbSNP
rs745862135 17 dbSNP
rs773759602 18 dbSNP
rs759227390 20 dbSNP
rs767084888 21 dbSNP
rs752197699 24 dbSNP
rs370663489 25 dbSNP
rs201924645 31 dbSNP
rs757236414 39 dbSNP
rs376816338 49 dbSNP
rs758106510 50 dbSNP
rs1435215673 62 dbSNP
rs1357045850 63 dbSNP
rs1318172977 68 dbSNP
rs1399748355 74 dbSNP
rs960242098 77 dbSNP
rs1164206162 78 dbSNP
rs1473957899 79 dbSNP
rs143456139 84 dbSNP
rs34821558 84 dbSNP
rs1450212201 86 dbSNP
rs1249977232 89 dbSNP
rs759033910 91 dbSNP
rs1339750522 98 dbSNP
rs968285960 104 dbSNP
rs1197511786 105 dbSNP
rs978307460 125 dbSNP
rs978555916 126 dbSNP
rs921714431 131 dbSNP
rs924092018 135 dbSNP
rs1429341640 141 dbSNP
rs1331362319 145 dbSNP
rs953136720 149 dbSNP
rs1407487138 153 dbSNP
rs939463769 155 dbSNP
rs545387773 166 dbSNP
rs1364071300 169 dbSNP
rs1163590838 176 dbSNP
rs1430943904 178 dbSNP
rs992626662 183 dbSNP
rs1166236836 191 dbSNP
rs1186010482 197 dbSNP
rs1475101062 206 dbSNP
rs1368257213 211 dbSNP
rs1475923261 212 dbSNP
rs552382026 215 dbSNP
rs376553240 221 dbSNP
rs916581318 222 dbSNP
rs1489810101 227 dbSNP
rs564495457 230 dbSNP
rs1205854145 235 dbSNP
rs760750991 239 dbSNP
rs527313906 248 dbSNP
rs1213503852 249 dbSNP
rs940944360 267 dbSNP
rs898443655 268 dbSNP
rs1395029807 269 dbSNP
rs547056812 273 dbSNP
rs187831962 274 dbSNP
rs529783076 295 dbSNP
rs905304701 297 dbSNP
rs1007980212 299 dbSNP
rs1018004323 306 dbSNP
rs1311513786 307 dbSNP
rs1056885786 308 dbSNP
rs1479570748 310 dbSNP
rs1428785072 311 dbSNP
rs775643903 315 dbSNP
rs1182632679 324 dbSNP
rs1326822639 325 dbSNP
rs1483886942 332 dbSNP
rs1229399162 335 dbSNP
rs192595616 337 dbSNP
rs370990221 338 dbSNP
rs1021281507 340 dbSNP
rs1280114601 341 dbSNP
rs1281151510 341 dbSNP
rs1221096044 342 dbSNP
rs569788890 356 dbSNP
rs1322411565 357 dbSNP
rs968357572 360 dbSNP
rs1229417135 364 dbSNP
rs1486657892 365 dbSNP
rs1010116652 371 dbSNP
rs1198981119 372 dbSNP
rs113499009 384 dbSNP
rs767122770 393 dbSNP
rs1000007245 395 dbSNP
rs1405658020 396 dbSNP
rs184414370 396 dbSNP
rs1160154186 398 dbSNP
rs1031185847 400 dbSNP
rs961117921 405 dbSNP
rs992262235 406 dbSNP
rs74703634 407 dbSNP
rs548525071 409 dbSNP
rs1388691243 417 dbSNP
rs1239065837 432 dbSNP
rs1201266351 433 dbSNP
rs534199350 435 dbSNP
rs374296198 437 dbSNP
rs1268420538 439 dbSNP
rs987201220 441 dbSNP
rs1174742167 444 dbSNP
rs1319172002 456 dbSNP
rs969428936 460 dbSNP
rs1223517938 462 dbSNP
rs760337967 463 dbSNP
rs554242195 472 dbSNP
rs1450607268 478 dbSNP
rs974074649 478 dbSNP
rs919901104 481 dbSNP
rs1382089667 483 dbSNP
rs1385268544 498 dbSNP
rs1455529082 510 dbSNP
rs929930519 511 dbSNP
rs1158114999 519 dbSNP
rs574160433 531 dbSNP
rs1047383957 537 dbSNP
rs920871754 542 dbSNP
rs1181653929 557 dbSNP
rs1248098150 564 dbSNP
rs1190175362 569 dbSNP
rs1484696492 570 dbSNP
rs376418140 572 dbSNP
rs542795712 574 dbSNP
rs1215557757 575 dbSNP
rs556678540 578 dbSNP
rs751771364 582 dbSNP
rs1294639109 584 dbSNP
rs1244419092 585 dbSNP
rs762162822 589 dbSNP
rs899606669 590 dbSNP
rs1298445365 593 dbSNP
rs1383932317 594 dbSNP
rs1360177675 596 dbSNP
rs1234940235 618 dbSNP
rs193292964 620 dbSNP
rs1436988639 633 dbSNP
rs1042757821 645 dbSNP
rs1045271941 649 dbSNP
rs1423908073 661 dbSNP
rs576564547 662 dbSNP
rs545656950 664 dbSNP
rs1255460487 665 dbSNP
rs1351743348 674 dbSNP
rs145429006 681 dbSNP
rs1056516712 686 dbSNP
rs1191383393 688 dbSNP
rs1489050687 693 dbSNP
rs1271479051 696 dbSNP
rs866438862 697 dbSNP
rs1464696997 704 dbSNP
rs1359360209 705 dbSNP
rs867146316 708 dbSNP
rs1275928550 710 dbSNP
rs565254079 716 dbSNP
rs1194822507 723 dbSNP
rs1305819247 724 dbSNP
rs1295171952 735 dbSNP
rs1255493664 741 dbSNP
rs1431911578 742 dbSNP
rs892536538 744 dbSNP
rs1404034624 753 dbSNP
rs371122237 759 dbSNP
rs1031634684 765 dbSNP
rs960978897 767 dbSNP
rs188712361 782 dbSNP
rs1371997754 787 dbSNP
rs1455039402 790 dbSNP
rs1023747170 793 dbSNP
rs1176411771 794 dbSNP
rs73503381 799 dbSNP
rs1366941866 801 dbSNP
rs1490275501 802 dbSNP
rs560593619 804 dbSNP
rs142644469 806 dbSNP
rs1327644626 817 dbSNP
rs146916040 825 dbSNP
rs1009140746 828 dbSNP
rs1018738414 829 dbSNP
rs1222693123 835 dbSNP
rs961773688 844 dbSNP
rs1317524484 846 dbSNP
rs1241484701 848 dbSNP
rs951425615 857 dbSNP
rs1328721845 859 dbSNP
rs971753093 862 dbSNP
rs982796013 865 dbSNP
rs569783872 867 dbSNP
rs1487823809 870 dbSNP
rs1480339075 878 dbSNP
rs981007656 891 dbSNP
rs192551576 905 dbSNP
rs568366408 910 dbSNP
rs939568316 913 dbSNP
rs1039586058 914 dbSNP
rs992733353 915 dbSNP
rs1462669890 919 dbSNP
rs1261553757 931 dbSNP
rs1203269188 940 dbSNP
rs1329682553 947 dbSNP
rs1262283579 952 dbSNP
rs1236530619 953 dbSNP
rs1335136090 955 dbSNP
rs1313286252 956 dbSNP
rs1454165444 958 dbSNP
rs1250622847 961 dbSNP
rs1457428114 963 dbSNP
rs914009194 965 dbSNP
rs1160656565 972 dbSNP
rs1452027281 976 dbSNP
rs1363750261 983 dbSNP
rs562521439 986 dbSNP
rs921069425 986 dbSNP
rs1228630608 991 dbSNP
rs947139149 991 dbSNP
rs1043718142 996 dbSNP
rs1410833490 997 dbSNP
rs1461611978 1000 dbSNP
rs1349660443 1001 dbSNP
rs1042786337 1002 dbSNP
rs1266006579 1005 dbSNP
rs565964157 1007 dbSNP
rs536524852 1014 dbSNP
rs1248080448 1019 dbSNP
rs902854468 1021 dbSNP
rs534944442 1030 dbSNP
rs1313750850 1031 dbSNP
rs1435101673 1034 dbSNP
rs1056796240 1038 dbSNP
rs143243334 1041 dbSNP
rs757055627 1052 dbSNP
rs1315729149 1054 dbSNP
rs74906935 1056 dbSNP
rs905332320 1062 dbSNP
rs995557523 1070 dbSNP
rs1164843610 1071 dbSNP
rs536705600 1071 dbSNP
rs1050401619 1078 dbSNP
rs1298639582 1082 dbSNP
rs1383858317 1082 dbSNP
rs1374176137 1085 dbSNP
rs1393260377 1088 dbSNP
rs556405465 1089 dbSNP
rs1286494991 1090 dbSNP
rs1008757175 1091 dbSNP
rs1244108764 1091 dbSNP
rs576548250 1091 dbSNP
rs889030549 1091 dbSNP
rs1446281713 1094 dbSNP
rs1019182054 1100 dbSNP
rs1027518505 1100 dbSNP
rs1350170767 1101 dbSNP
rs1234113311 1102 dbSNP
rs1489839481 1103 dbSNP
rs1295517504 1104 dbSNP
rs1320225039 1105 dbSNP
rs538834071 1108 dbSNP
rs558756675 1123 dbSNP
rs897592137 1124 dbSNP
rs1340832786 1131 dbSNP
rs993223129 1132 dbSNP
rs1226233080 1136 dbSNP
rs1027325477 1137 dbSNP
rs951658747 1138 dbSNP
rs1407107668 1142 dbSNP
rs1364276824 1153 dbSNP
rs1303055551 1168 dbSNP
rs1252359145 1188 dbSNP
rs1410645567 1193 dbSNP
rs983213393 1193 dbSNP
rs1019597107 1205 dbSNP
rs980836443 1207 dbSNP
rs1481893938 1208 dbSNP
rs1202461527 1226 dbSNP
rs1213943954 1235 dbSNP
rs1201352824 1237 dbSNP
rs150425402 1244 dbSNP
rs975303846 1245 dbSNP
rs961226986 1251 dbSNP
rs1475365431 1253 dbSNP
rs138228342 1258 dbSNP
rs1411395756 1268 dbSNP
rs1270290851 1272 dbSNP
rs1194670746 1279 dbSNP
rs1323853660 1283 dbSNP
rs1422977442 1296 dbSNP
rs947167146 1299 dbSNP
rs978607501 1302 dbSNP
rs945479401 1304 dbSNP
rs1274851071 1309 dbSNP
rs979453712 1316 dbSNP
rs1170853988 1322 dbSNP
rs113520372 1328 dbSNP
rs1409408978 1334 dbSNP
rs1407138944 1336 dbSNP
rs925364774 1337 dbSNP
rs934407858 1338 dbSNP
rs8052563 1341 dbSNP
rs895462066 1347 dbSNP
rs1050174804 1353 dbSNP
rs1471122763 1357 dbSNP
rs1231063440 1358 dbSNP
rs1446858209 1363 dbSNP
rs1461360859 1365 dbSNP
rs1264665464 1367 dbSNP
rs1369961607 1373 dbSNP
rs543475457 1375 dbSNP
rs1415634458 1377 dbSNP
rs1295311649 1378 dbSNP
rs1377467104 1379 dbSNP
rs1228163639 1380 dbSNP
rs1278381063 1382 dbSNP
rs563252786 1390 dbSNP
rs771977973 1391 dbSNP
rs1278240328 1392 dbSNP
rs1309854693 1393 dbSNP
rs1226821695 1394 dbSNP
rs1446191771 1398 dbSNP
rs1339017285 1399 dbSNP
rs1468419113 1399 dbSNP
rs532268086 1399 dbSNP
rs1405548008 1402 dbSNP
rs1485689036 1404 dbSNP
rs1402182889 1407 dbSNP
rs552378597 1408 dbSNP
rs1157900944 1409 dbSNP
rs1444789424 1422 dbSNP
rs1244435298 1423 dbSNP
rs944593326 1424 dbSNP
rs573828101 1425 dbSNP
rs559633777 1430 dbSNP
rs1482704150 1435 dbSNP
rs1027137671 1438 dbSNP
rs887219094 1439 dbSNP
rs897623373 1442 dbSNP
rs1360332136 1444 dbSNP
rs993254052 1446 dbSNP
rs1167814480 1447 dbSNP
rs1378748046 1448 dbSNP
rs1004270636 1450 dbSNP
rs1389667698 1454 dbSNP
rs1343213676 1455 dbSNP
rs528354211 1461 dbSNP
rs1425242975 1465 dbSNP
rs1336226675 1467 dbSNP
rs548508139 1468 dbSNP
rs750373503 1469 dbSNP
rs1447569375 1493 dbSNP
rs965332674 1501 dbSNP
rs1443424622 1505 dbSNP
rs777723139 1506 dbSNP
rs975333294 1510 dbSNP
rs1028275728 1515 dbSNP
rs34107792 1518 dbSNP
rs1487092337 1523 dbSNP
rs1240704742 1528 dbSNP
rs1216271165 1535 dbSNP
rs1490657415 1539 dbSNP
rs746877518 1545 dbSNP
rs184904335 1550 dbSNP
rs1296646970 1559 dbSNP
rs979024227 1560 dbSNP
rs1360065337 1562 dbSNP
rs1297364516 1583 dbSNP
rs1297449963 1585 dbSNP
rs1349203205 1586 dbSNP
rs536267802 1590 dbSNP
rs1235901285 1597 dbSNP
rs1021079836 1598 dbSNP
rs924441812 1602 dbSNP
rs1215989849 1604 dbSNP
rs550184985 1610 dbSNP
rs1193421718 1620 dbSNP
rs189789035 1620 dbSNP
rs1480955967 1637 dbSNP
rs1271733700 1639 dbSNP
rs925396538 1643 dbSNP
rs1488232164 1644 dbSNP
rs1206635754 1646 dbSNP
rs1306018317 1647 dbSNP
rs1463347640 1648 dbSNP
rs1277745337 1653 dbSNP
rs1223938176 1654 dbSNP
rs1187879066 1660 dbSNP
rs59650409 1661 dbSNP
rs985492051 1665 dbSNP
rs1397050724 1666 dbSNP
rs1455508253 1677 dbSNP
rs1459990137 1685 dbSNP
rs1399157194 1686 dbSNP
rs912531124 1689 dbSNP
rs1470547208 1690 dbSNP
rs1174462656 1691 dbSNP
rs1423141946 1692 dbSNP
rs1414137230 1694 dbSNP
rs1160049512 1699 dbSNP
rs558713699 1712 dbSNP
rs1391314200 1714 dbSNP
rs1179046549 1717 dbSNP
rs1479683890 1721 dbSNP
rs1433408149 1727 dbSNP
rs1244384433 1728 dbSNP
rs1309030574 1728 dbSNP
rs1336309297 1728 dbSNP
rs1337052823 1728 dbSNP
rs1375516604 1728 dbSNP
rs1389219738 1728 dbSNP
rs34360832 1728 dbSNP
rs527631148 1728 dbSNP
rs769197760 1728 dbSNP
rs1454261790 1735 dbSNP
rs1403365453 1736 dbSNP
rs1320266227 1737 dbSNP
rs1171226649 1738 dbSNP
rs1372445800 1739 dbSNP
rs1465816671 1739 dbSNP
rs1161870362 1742 dbSNP
rs1364924280 1742 dbSNP
rs1437976406 1750 dbSNP
rs1476041858 1751 dbSNP
rs1272585730 1752 dbSNP
rs1366204971 1754 dbSNP
rs12596887 1755 dbSNP
rs1224026063 1756 dbSNP
rs568352312 1758 dbSNP
rs1326616260 1759 dbSNP
rs1207923308 1763 dbSNP
rs1254290479 1763 dbSNP
rs572313136 1764 dbSNP
rs1469816320 1770 dbSNP
rs1196591495 1771 dbSNP
rs1245062345 1773 dbSNP
rs146038717 1775 dbSNP
rs1236778941 1790 dbSNP
rs12596890 1798 dbSNP
rs1315149955 1800 dbSNP
rs1454084562 1804 dbSNP
rs919167502 1810 dbSNP
rs1333065883 1812 dbSNP
rs1395845837 1814 dbSNP
rs1414511742 1825 dbSNP
rs1386124646 1827 dbSNP
rs1291201960 1832 dbSNP
rs776480886 1836 dbSNP
rs1044037684 1840 dbSNP
rs905477701 1842 dbSNP
rs1446469786 1845 dbSNP
rs1366981695 1850 dbSNP
rs1048906503 1853 dbSNP
rs887562663 1855 dbSNP
rs931553589 1862 dbSNP
rs1263602865 1863 dbSNP
rs574339422 1867 dbSNP
rs1054815048 1872 dbSNP
rs1292352165 1875 dbSNP
rs1247602971 1880 dbSNP
rs75684939 1896 dbSNP
rs60140661 1901 dbSNP
rs180816815 1903 dbSNP
rs1327769930 1912 dbSNP
rs1298189738 1913 dbSNP
rs1348819233 1915 dbSNP
rs1398498696 1919 dbSNP
rs1360473882 1926 dbSNP
rs545923845 1927 dbSNP
rs1442366607 1930 dbSNP
rs537866202 1931 dbSNP
rs1426699723 1946 dbSNP
rs901248178 1949 dbSNP
rs183753111 1950 dbSNP
rs1028308264 1955 dbSNP
rs189240799 1959 dbSNP
rs554519725 1962 dbSNP
rs561820165 1971 dbSNP
rs1477362534 1973 dbSNP
rs1000095902 1976 dbSNP
rs912573783 1981 dbSNP
rs965793007 1993 dbSNP
rs1449429780 1997 dbSNP
rs1195805189 1998 dbSNP
rs1289117286 2001 dbSNP
rs1438289054 2002 dbSNP
rs1341079035 2005 dbSNP
rs1217238607 2009 dbSNP
rs972725520 2009 dbSNP
rs1205389182 2011 dbSNP
rs1340293355 2013 dbSNP
rs919198651 2015 dbSNP
rs1407311241 2021 dbSNP
rs1329786216 2028 dbSNP
rs1323004869 2033 dbSNP
rs781452756 2034 dbSNP
rs1410552949 2043 dbSNP
rs1254052211 2046 dbSNP
rs1398965778 2047 dbSNP
rs1450636301 2047 dbSNP
rs570322073 2047 dbSNP
rs530864577 2048 dbSNP
rs1181933813 2054 dbSNP
rs1439021050 2056 dbSNP
rs1255805266 2057 dbSNP
rs1165993702 2060 dbSNP
rs59258212 2060 dbSNP
rs1393447574 2061 dbSNP
rs1048936894 2063 dbSNP
rs1323727007 2065 dbSNP
rs955867746 2066 dbSNP
rs1473952150 2069 dbSNP
rs1221251992 2077 dbSNP
rs909013802 2086 dbSNP
rs1274750676 2092 dbSNP
rs748500165 2098 dbSNP
rs937776263 2099 dbSNP
rs993063298 2103 dbSNP
rs1161804403 2106 dbSNP
rs917035801 2120 dbSNP
rs549907298 2121 dbSNP
rs1412495660 2122 dbSNP
rs1390694414 2127 dbSNP
rs1159044893 2128 dbSNP
rs969761741 2136 dbSNP
rs570076526 2137 dbSNP
rs949081478 2138 dbSNP
rs1368102790 2148 dbSNP
rs1042026050 2152 dbSNP
rs920231951 2154 dbSNP
rs931574479 2165 dbSNP
rs1224817892 2166 dbSNP
rs115308832 2168 dbSNP
rs908711436 2169 dbSNP
rs940234385 2170 dbSNP
rs539660679 2176 dbSNP
rs1304788077 2181 dbSNP
rs1283373608 2183 dbSNP
rs1445595919 2183 dbSNP
rs552253588 2184 dbSNP
rs1230446268 2187 dbSNP
rs1318658037 2190 dbSNP
rs996919554 2193 dbSNP
rs1276869270 2206 dbSNP
rs1157549289 2212 dbSNP
rs1049777395 2215 dbSNP
rs965472901 2217 dbSNP
rs1179746737 2230 dbSNP
rs904487086 2233 dbSNP
rs556309814 2239 dbSNP
rs1025620149 2248 dbSNP
rs1031624159 2255 dbSNP
rs565905252 2258 dbSNP
rs1489576139 2261 dbSNP
rs181953331 2264 dbSNP
rs74779991 2265 dbSNP
rs1226834691 2269 dbSNP
rs1024081075 2270 dbSNP
rs369858816 2274 dbSNP
rs917690191 2277 dbSNP
rs754509353 2283 dbSNP
rs372838087 2284 dbSNP
rs1476037747 2291 dbSNP
rs568637601 2292 dbSNP
rs537794819 2297 dbSNP
rs936934307 2300 dbSNP
rs1351098250 2301 dbSNP
rs1054480881 2306 dbSNP
rs142173701 2307 dbSNP
rs1173678797 2309 dbSNP
rs758128501 2323 dbSNP
rs576911597 2329 dbSNP
rs1019767432 2334 dbSNP
rs1261706846 2344 dbSNP
rs140530883 2354 dbSNP
rs1193572530 2355 dbSNP
rs940247712 2368 dbSNP
rs1267307571 2369 dbSNP
rs1219413249 2375 dbSNP
rs1321372694 2376 dbSNP
rs1273946313 2377 dbSNP
rs1041261852 2390 dbSNP
rs1333278255 2404 dbSNP
rs1326735739 2412 dbSNP
rs1220279415 2426 dbSNP
rs1338138515 2431 dbSNP
rs1203350553 2442 dbSNP
rs1405501371 2446 dbSNP
rs1437226282 2463 dbSNP
rs535738918 2468 dbSNP
rs932726864 2469 dbSNP
rs1354803584 2472 dbSNP
rs1172337285 2478 dbSNP
rs1049808452 2479 dbSNP
rs1421920290 2479 dbSNP
rs1193312575 2480 dbSNP
rs1481068156 2481 dbSNP
rs1270033123 2486 dbSNP
rs746777658 2487 dbSNP
rs1488178819 2494 dbSNP
rs554597332 2496 dbSNP
rs757157447 2497 dbSNP
rs553120338 2498 dbSNP
rs573010775 2502 dbSNP
rs1233730315 2526 dbSNP
rs1053513275 2531 dbSNP
rs1347474346 2532 dbSNP
rs1257199123 2533 dbSNP
rs984112408 2540 dbSNP
rs1313905458 2541 dbSNP
rs891742593 2544 dbSNP
rs1014099109 2550 dbSNP
rs1198890963 2568 dbSNP
rs1255913291 2570 dbSNP
rs1465600468 2571 dbSNP
rs1333020214 2581 dbSNP
rs959307146 2587 dbSNP
rs1399042064 2591 dbSNP
rs1246767759 2593 dbSNP
rs1466852639 2594 dbSNP
rs1462778887 2596 dbSNP
rs61535266 2606 dbSNP
rs781184020 2609 dbSNP
rs1173779065 2611 dbSNP
rs1432731360 2616 dbSNP
rs917736837 2621 dbSNP
rs1180509995 2628 dbSNP
rs557209759 2630 dbSNP
rs771714159 2636 dbSNP
rs1237748089 2637 dbSNP
rs1378800736 2641 dbSNP
rs1001245472 2645 dbSNP
rs1204119095 2657 dbSNP
rs1484095142 2661 dbSNP
rs745849388 2662 dbSNP
rs949141923 2664 dbSNP
rs1317385318 2667 dbSNP
rs977777834 2668 dbSNP
rs1237262296 2675 dbSNP
rs923686418 2676 dbSNP
rs577165067 2677 dbSNP
rs936381670 2682 dbSNP
rs1053436896 2695 dbSNP
rs150737134 2698 dbSNP
rs1301397146 2699 dbSNP
rs951884499 2700 dbSNP
rs1465980702 2702 dbSNP
rs1381434197 2704 dbSNP
rs983160916 2706 dbSNP
rs1385429235 2711 dbSNP
rs377270930 2711 dbSNP
rs1437886212 2715 dbSNP
rs1041626012 2720 dbSNP
rs549886685 2726 dbSNP
rs901300508 2726 dbSNP
rs961662099 2726 dbSNP
rs1199598147 2727 dbSNP
rs774295870 2736 dbSNP
rs775102531 2740 dbSNP
rs922774720 2741 dbSNP
rs1213875315 2745 dbSNP
rs1318262409 2751 dbSNP
rs67733706 2754 dbSNP
rs763905466 2754 dbSNP
rs1246549880 2762 dbSNP
rs1005996190 2771 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084065. RNA binding protein: AGO2. Condition:CLIP_emetine_AbnovaAb HITS-CLIP data was present in GSM1084066. RNA binding protein: AGO2. Condition:CLIP_noemetine_SantaCruzAb HITS-CLIP data was present in GSM1084067. RNA binding protein: AGO2. Condition:CLIP_emetine_SantaCruzAb HITS-CLIP data was present in GSM1084068. RNA binding protein: AGO2. Condition:CLIP_noemetine_SigmaAb HITS-CLIP data was present in GSM1084079. RNA binding protein: AGO2. Condition:CLIP_hippuristanol_rep2_AbnovaAb HITS-CLIP data was present in GSM1084081. RNA binding protein: AGO2. Condition:CLIP_hippuristanol_rep2_SantaCruzAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084065
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_emetine_AbnovaAb
Location of target site ENST00000576634.1 | 3UTR | GAAAAGGGAGAGAGGGAGGACUCUUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1084066
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noemetine_SantaCruzAb
Location of target site ENST00000576634.1 | 3UTR | GAGAGAGGGAGGACUCUUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM1084067
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_emetine_SantaCruzAb
Location of target site ENST00000576634.1 | 3UTR | AAAAGGGAGAGAGGGAGGACUCUUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM1084068
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noemetine_SigmaAb
Location of target site ENST00000576634.1 | 3UTR | AGGGAGAGAGGGAGGACUCUUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 5 for dataset GSM1084079
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_hippuristanol_rep2_AbnovaAb
Location of target site ENST00000576634.1 | 3UTR | AAAGGGAGAGAGGGAGGACUCUUUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 6 for dataset GSM1084081
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_hippuristanol_rep2_SantaCruzAb
Location of target site ENST00000576634.1 | 3UTR | AAAAGGGAGAGAGGGAGGACUCUUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
203 hsa-miR-6867-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT078229 DYNLL2 dynein light chain LC8-type 2 2 2
MIRT107799 SLC1A1 solute carrier family 1 member 1 2 2
MIRT115808 CAPN15 calpain 15 2 2
MIRT137570 RCOR1 REST corepressor 1 2 2
MIRT161372 MBNL1 muscleblind like splicing regulator 1 2 2
MIRT320477 HOXA10 homeobox A10 2 2
MIRT444449 PTPRG protein tyrosine phosphatase, receptor type G 2 2
MIRT461305 MRPS27 mitochondrial ribosomal protein S27 2 6
MIRT470306 PPP6R1 protein phosphatase 6 regulatory subunit 1 2 2
MIRT471679 PABPN1 poly(A) binding protein nuclear 1 2 2
MIRT475546 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U like 1 2 2
MIRT480901 BCL2L2-PABPN1 BCL2L2-PABPN1 readthrough 2 2
MIRT489368 RAB11B RAB11B, member RAS oncogene family 2 2
MIRT489557 PLD6 phospholipase D family member 6 2 2
MIRT494969 TMEM233 transmembrane protein 233 2 2
MIRT496634 SLC46A1 solute carrier family 46 member 1 2 2
MIRT500259 ZNF788 zinc finger family member 788 2 6
MIRT500272 ZNF781 zinc finger protein 781 2 8
MIRT500328 ZNF487P zinc finger protein 487 1 3
MIRT504012 ACSL6 acyl-CoA synthetase long chain family member 6 2 2
MIRT504830 EREG epiregulin 2 2
MIRT513588 DCTN6 dynactin subunit 6 2 2
MIRT520896 STMN1 stathmin 1 2 2
MIRT525275 C18orf32 chromosome 18 open reading frame 32 2 2
MIRT526166 ANKRD65 ankyrin repeat domain 65 2 2
MIRT526582 CCDC43 coiled-coil domain containing 43 2 2
MIRT527812 TMEM74B transmembrane protein 74B 2 2
MIRT528141 LRRC38 leucine rich repeat containing 38 2 2
MIRT529903 C1orf64 steroid receptor associated and regulated protein 2 4
MIRT531980 SLCO1B3 solute carrier organic anion transporter family member 1B3 2 2
MIRT532251 TBPL2 TATA-box binding protein like 2 2 2
MIRT534300 SKIDA1 SKI/DACH domain containing 1 2 2
MIRT534879 QKI QKI, KH domain containing RNA binding 2 2
MIRT538305 CSNK2A1 casein kinase 2 alpha 1 2 2
MIRT539385 ADRB1 adrenoceptor beta 1 2 2
MIRT541304 GDE1 glycerophosphodiester phosphodiesterase 1 2 2
MIRT543960 RNF20 ring finger protein 20 2 2
MIRT544380 ZNF266 zinc finger protein 266 2 2
MIRT544451 KRBOX4 KRAB box domain containing 4 2 2
MIRT545783 ZNF791 zinc finger protein 791 2 4
MIRT548156 FRAT2 FRAT2, WNT signaling pathway regulator 2 2
MIRT556660 KMT2D lysine methyltransferase 2D 2 4
MIRT557715 GABARAPL1 GABA type A receptor associated protein like 1 2 2
MIRT562701 ZNF415 zinc finger protein 415 2 2
MIRT563050 ZNF138 zinc finger protein 138 2 2
MIRT564307 CCNT1 cyclin T1 2 2
MIRT568333 BACH1 BTB domain and CNC homolog 1 2 2
MIRT570864 ZNF525 zinc finger protein 525 2 2
MIRT570874 ZFP1 ZFP1 zinc finger protein 2 2
MIRT571516 ZNF625 zinc finger protein 625 2 2
MIRT572470 MTMR10 myotubularin related protein 10 2 2
MIRT572898 RUNDC3B RUN domain containing 3B 2 2
MIRT573084 APLN apelin 2 2
MIRT575251 Timp3 tissue inhibitor of metalloproteinase 3 2 2
MIRT575275 Mapk8ip2 mitogen-activated protein kinase 8 interacting protein 2 2 2
MIRT607230 LINS lines homolog 1 2 4
MIRT611803 FCRL4 Fc receptor like 4 2 2
MIRT612669 POU2F1 POU class 2 homeobox 1 2 4
MIRT612739 MYOCD myocardin 2 2
MIRT613409 CDH8 cadherin 8 2 4
MIRT614007 PAOX polyamine oxidase 2 2
MIRT615188 CLUAP1 clusterin associated protein 1 2 2
MIRT616497 ATP6AP1L ATPase H+ transporting accessory protein 1 like 2 2
MIRT616524 URM1 ubiquitin related modifier 1 2 2
MIRT617066 SPIB Spi-B transcription factor 2 2
MIRT617813 EMX2 empty spiracles homeobox 2 2 2
MIRT619291 FAM26E calcium homeostasis modulator family member 5 2 2
MIRT619375 KLHL12 kelch like family member 12 2 2
MIRT619499 TXLNB taxilin beta 2 2
MIRT619601 MKKS McKusick-Kaufman syndrome 2 2
MIRT619754 MYO1F myosin IF 2 2
MIRT619976 ZSCAN22 zinc finger and SCAN domain containing 22 2 2
MIRT620743 CCR5 C-C motif chemokine receptor 5 (gene/pseudogene) 2 2
MIRT620871 KCTD7 potassium channel tetramerization domain containing 7 2 2
MIRT621380 CLNK cytokine dependent hematopoietic cell linker 2 2
MIRT621511 ZNF638 zinc finger protein 638 2 2
MIRT621537 ZNF500 zinc finger protein 500 2 2
MIRT621772 TMEM87B transmembrane protein 87B 2 2
MIRT622193 SLC5A12 solute carrier family 5 member 12 2 2
MIRT622319 SEC63 SEC63 homolog, protein translocation regulator 2 2
MIRT622738 PITPNM3 PITPNM family member 3 2 2
MIRT622996 ONECUT3 one cut homeobox 3 2 2
MIRT625301 SHISA6 shisa family member 6 2 2
MIRT625637 KCNQ3 potassium voltage-gated channel subfamily Q member 3 2 2
MIRT627698 RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase 2 2
MIRT627751 RAD51L3-RFFL RAD51L3-RFFL readthrough 2 2
MIRT628438 ANTXR2 anthrax toxin receptor 2 2 2
MIRT635440 SLC25A44 solute carrier family 25 member 44 2 2
MIRT637166 TMEM50A transmembrane protein 50A 2 2
MIRT638207 SPTLC2 serine palmitoyltransferase long chain base subunit 2 2 2
MIRT639288 TFAP2A transcription factor AP-2 alpha 2 4
MIRT639398 NEURL1B neuralized E3 ubiquitin protein ligase 1B 2 2
MIRT641230 SEMA3E semaphorin 3E 2 2
MIRT641501 STC2 stanniocalcin 2 2 2
MIRT642577 PSTPIP1 proline-serine-threonine phosphatase interacting protein 1 2 2
MIRT642735 TDRD6 tudor domain containing 6 2 2
MIRT644001 PPP1R3G protein phosphatase 1 regulatory subunit 3G 2 2
MIRT644210 CBS cystathionine-beta-synthase 2 2
MIRT645405 FAM110A family with sequence similarity 110 member A 2 2
MIRT645685 TBC1D13 TBC1 domain family member 13 2 2
MIRT645699 C1orf50 chromosome 1 open reading frame 50 2 2
MIRT645761 SURF6 surfeit 6 2 2
MIRT645826 INADL PATJ, crumbs cell polarity complex component 2 2
MIRT645914 PLXNA3 plexin A3 2 2
MIRT646167 PTPN14 protein tyrosine phosphatase, non-receptor type 14 2 2
MIRT646634 COA4 cytochrome c oxidase assembly factor 4 homolog 2 2
MIRT647547 CYP2B6 cytochrome P450 family 2 subfamily B member 6 2 2
MIRT648262 ZNF582 zinc finger protein 582 2 2
MIRT648385 ZNF22 zinc finger protein 22 2 2
MIRT648629 LEMD2 LEM domain containing 2 2 2
MIRT649353 SLC27A2 solute carrier family 27 member 2 2 2
MIRT649395 SH2D4A SH2 domain containing 4A 2 2
MIRT650241 CD68 CD68 molecule 2 2
MIRT650379 PTGIS prostaglandin I2 synthase 2 2
MIRT650705 KRT32 keratin 32 2 2
MIRT650854 UNC13D unc-13 homolog D 2 2
MIRT651042 ZNF644 zinc finger protein 644 2 2
MIRT651102 ZNF48 zinc finger protein 48 2 2
MIRT651130 ZNF398 zinc finger protein 398 2 2
MIRT652089 TSKU tsukushi, small leucine rich proteoglycan 2 2
MIRT652200 TRIM33 tripartite motif containing 33 2 2
MIRT652422 TMEM239 transmembrane protein 239 2 2
MIRT652755 TET3 tet methylcytosine dioxygenase 3 2 2
MIRT653201 SP9 Sp9 transcription factor 2 2
MIRT653338 SMG7 SMG7, nonsense mediated mRNA decay factor 2 2
MIRT653715 SLC25A32 solute carrier family 25 member 32 2 2
MIRT654456 RAP2B RAP2B, member of RAS oncogene family 2 2
MIRT654499 RABIF RAB interacting factor 2 2
MIRT654678 PSMB5 proteasome subunit beta 5 2 2
MIRT655162 PHF20L1 PHD finger protein 20 like 1 2 2
MIRT655540 PADI2 peptidyl arginine deiminase 2 2 4
MIRT655850 NFE2L1 nuclear factor, erythroid 2 like 1 2 2
MIRT656248 MEX3A mex-3 RNA binding family member A 2 2
MIRT656581 LSAMP limbic system-associated membrane protein 2 2
MIRT657597 GRID1 glutamate ionotropic receptor delta type subunit 1 2 2
MIRT657824 GJD3 gap junction protein delta 3 2 2
MIRT658466 FAM102B family with sequence similarity 102 member B 2 2
MIRT659083 DENR density regulated re-initiation and release factor 2 2
MIRT659196 CYBB cytochrome b-245 beta chain 2 2
MIRT659558 CGGBP1 CGG triplet repeat binding protein 1 2 2
MIRT659860 CAPRIN1 cell cycle associated protein 1 2 2
MIRT660172 BNC2 basonuclin 2 2 2
MIRT660626 ANKRD52 ankyrin repeat domain 52 2 2
MIRT660917 ADAM19 ADAM metallopeptidase domain 19 2 2
MIRT660979 ABHD2 abhydrolase domain containing 2 2 2
MIRT661564 EPHX2 epoxide hydrolase 2 2 2
MIRT662214 CCRL2 C-C motif chemokine receptor like 2 2 2
MIRT662246 C15orf52 chromosome 15 open reading frame 52 2 2
MIRT662560 IL2RA interleukin 2 receptor subunit alpha 2 2
MIRT662591 MAGEB4 MAGE family member B4 2 2
MIRT663294 TECPR2 tectonin beta-propeller repeat containing 2 2 2
MIRT663437 FBXO2 F-box protein 2 2 2
MIRT663811 RNF128 ring finger protein 128, E3 ubiquitin protein ligase 2 2
MIRT663821 NLRP12 NLR family pyrin domain containing 12 2 2
MIRT665959 SZRD1 SUZ RNA binding domain containing 1 2 2
MIRT666115 SRRM4 serine/arginine repetitive matrix 4 2 2
MIRT667448 MAPK14 mitogen-activated protein kinase 14 2 2
MIRT669330 BSND barttin CLCNK type accessory beta subunit 2 2
MIRT669409 ATP9A ATPase phospholipid transporting 9A (putative) 2 2
MIRT669641 ACSBG1 acyl-CoA synthetase bubblegum family member 1 2 2
MIRT672663 GTF2H5 general transcription factor IIH subunit 5 2 2
MIRT673266 RUNDC1 RUN domain containing 1 2 2
MIRT676995 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT679290 SSBP2 single stranded DNA binding protein 2 2 2
MIRT687508 NCKAP1 NCK associated protein 1 2 2
MIRT698932 SPATA2 spermatogenesis associated 2 2 2
MIRT700852 PERP PERP, TP53 apoptosis effector 2 2
MIRT702426 KIAA1958 KIAA1958 2 2
MIRT703939 EPB41L1 erythrocyte membrane protein band 4.1 like 1 2 2
MIRT708962 SLC12A3 solute carrier family 12 member 3 2 2
MIRT709742 UBD ubiquitin D 2 2
MIRT709946 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT711121 CYYR1 cysteine and tyrosine rich 1 2 2
MIRT711217 RETSAT retinol saturase 2 2
MIRT711576 ASPA aspartoacylase 2 2
MIRT711599 LHX5 LIM homeobox 5 2 2
MIRT712232 RCC2 regulator of chromosome condensation 2 2 2
MIRT713317 TMEM44 transmembrane protein 44 2 2
MIRT713510 PAFAH2 platelet activating factor acetylhydrolase 2 2 2
MIRT713543 GJB1 gap junction protein beta 1 2 2
MIRT713621 MED8 mediator complex subunit 8 2 2
MIRT714988 TSPAN11 tetraspanin 11 2 2
MIRT715449 PTCD1 pentatricopeptide repeat domain 1 2 2
MIRT715575 ATP5J2-PTCD1 ATP5J2-PTCD1 readthrough 2 2
MIRT715771 DDX42 DEAD-box helicase 42 2 2
MIRT715887 GNG2 G protein subunit gamma 2 2 2
MIRT716091 HARS histidyl-tRNA synthetase 2 2
MIRT717403 ZCCHC24 zinc finger CCHC-type containing 24 2 2
MIRT717965 PXMP4 peroxisomal membrane protein 4 2 2
MIRT718324 METTL7A methyltransferase like 7A 2 2
MIRT718628 DIP2A disco interacting protein 2 homolog A 2 2
MIRT719213 CAMK4 calcium/calmodulin dependent protein kinase IV 2 2
MIRT719234 CYSLTR2 cysteinyl leukotriene receptor 2 2 2
MIRT719817 LRRC4 leucine rich repeat containing 4 2 2
MIRT719978 MAPK1 mitogen-activated protein kinase 1 2 2
MIRT720480 TMEM178B transmembrane protein 178B 2 2
MIRT720713 RAPGEF6 Rap guanine nucleotide exchange factor 6 2 2
MIRT721006 ZNF619 zinc finger protein 619 2 2
MIRT721741 SDK2 sidekick cell adhesion molecule 2 2 2
MIRT723547 ZDHHC22 zinc finger DHHC-type containing 22 2 2
MIRT723596 FKRP fukutin related protein 2 2
MIRT723746 AIFM2 apoptosis inducing factor, mitochondria associated 2 2 2
MIRT724784 C1D C1D nuclear receptor corepressor 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-6867-3p Paclitaxel 36314 NSC125973 approved sensitive cell line (A2780)

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