Gene Symbol |
ZC3H14
|
Synonyms |
MRT56, MSUT-2, NY-REN-37, SUT2, UKp68 |
Description |
zinc finger CCCH-type containing 14 |
Transcript |
NM_001160103
|
Other Transcripts |
NM_001160104
,
NM_024824
,
NM_207660
,
NM_207661
,
NM_207662
|
Expression |
|
Putative miRNA Targets on ZC3H14 |
|
3'UTR of ZC3H14 (miRNA target sites are highlighted) |
>ZC3H14|NM_001160103|3'UTR
1 CACCCAGTCCTGCCTGGCAGAAGATCATGCAGTTTGGAAGTTTTCATGTACTGATGAAAGATACTCTACAGAACTTGTCA
81 AATCTTTGAAACTTGGAATATATTGCTTTCATAATATGAAGTTTTATTGCCTATCTATCTGAAGTGTCTAATTTTTCAAG
161 TTTGTAAGTTTATTATGTGGTTTTAACATTGGGTGTTTTTGTTTTGTTTTTACTATGAAAAGACAGCTTAAGGAAGAGCT
241 AAATTCTGTTAAAATATTTGGGGCATGTTTGTGCACTGCTGTTGTGAGGATCAGCATATGAAATTGACATCATGGTTAGT
321 CATGGTACTGCAGCTTAGGGGGCTACACGGTTGCTGTGTGAGTGGAGAGATGCAGTGAGGCAGTTGTCATTATTCTAAAA
401 ATTGTACTACTTTCACTTTTCCCAAAGATTATATAATGTTCATAATCCACCATGAAAACAGCATTGGCCAAAGGTACTGA
481 GGCTGCTTAAAATATTCAATTCTGCTTTTTAATTTTTAAGTGAATTTAGTTTGAAAAGCATGATTATACAGGCCTCTCAG
561 GCTGAGTGCTACTTTGGTAAAGTTCCCAGTTTTCCTGCCTTCTGTGACAGGATGAATGAGGTGGGTATGGACAGTGGAGG
641 CAGCTGGAATGGCAAGTGCAGAAAATAGGAACAGTTCTATACAGTGCTCTCATTTACTAATAACATAATGCCTTCTAAAT
721 AATTTTTTTGGGAAACTACATTATCACAAAATTATACAAATTTTTTTACAAGTATTTACATACTGTATCTGAAAACAGAC
801 TTTAAAGTCACAAGATTATAAATGTACATATATATTCTCACATTCTGAAAAATAACATTCTCAGAATCCACAGAAAATAT
881 ACTTAGTTACTACTGAAGATAATTTTTGAAATGTAAAAATTAGATTTAAATAGTATATTTTAAATGACAGAACTATAATT
961 ACAGAGATCAGATCAGATAGGTAAACTGCAAGATAGATAGGATGAAACTTTTGGCCTACTGTATTACTTACAGAGTTTTT
1041 TTGTGTGTGGTTTTTAAAACTGTTAAGGCAAGAAGTGTCAAATGCTTTAGAGTTAAATAACAGATCACTGATTTCAAAGA
1121 CTTGGTGTATAGTGTTAAAAATTAAAGCTTAAAAGGTGGTTAGAAAAGTGGATTAATGCAAAAGGGGTAATAAAGACTGC
1201 AACATTCTCAGGACCAAATTAAACTGCTAAAAAAAAAAAAAAAGTTCATTGACTTGCTTAGTCGTATACTCAAATGATGA
1281 TAAACCTACATGTGCAAAGGCTCACGTTTAAGATTGTCAAGCCAGCAGTCTACTGTTGTGTTGCCATTGCTTTTCCATTG
1361 GGAGAAGAAAGAATTAACCAGTCATTAAACCATTTGGTAAGTTGCACTTTGCTGTGCTGATCCCACAGGAAAGGCTTGAA
1441 ACACGAGAAGCAGCAAAGACAGAGCACACAAGTGCATAAGGCTGTTGTCTTCGGCTTGGGTGAAATGACAGTTCCTCTTC
1521 ATTCTAAAGGTTTACTCCATTGAATTTAAGGCATTTGTTCATTCCAGTGTTGAGATGCTTTGCATCTCTGCAGAAGAAAT
1601 TTATTTTAAATTGTTTAAATATCTGGAAATACTTTTAGCTATCATTTATAAAGATAGTTTTGTTCTCAGTTTCACTATAA
1681 ATTATAGAACAAATGGGAAACAAGGGTTTAATTTAGTTCAGCCATTTTACAAGGAAATAATAAAATACTAAAATCTGAAA
1761 AAAAAAAAAAAA
Target sites
Provided by authors
Predicted by miRanda
DRVs
SNPs
DRVs & SNPs
|
miRNA-target interactions (Predicted by miRanda) |
ID |
Duplex structure |
Position |
Score |
MFE |
1
|
miRNA 3' acucUGUCCA--AGUACGACGAua 5'
| |||| | | ||||||
Target 5' ggccAAAGGTACTGAGGCTGCTta 3'
|
466 - 489
|
136.00 |
-12.30 |
2
|
miRNA 3' acUCUGUCCAAGUA---CGACGAUa 5'
| ||| || ||| ||||:|:
Target 5' gcACACAAGTGCATAAGGCTGTTGt 3'
|
1464 - 1488
|
132.00 |
-10.90 |
3
|
miRNA 3' acUCUGUCCAA----GU-ACGACGAUa 5'
:|:|| ||| || |||||:|:
Target 5' tgGGGCATGTTTGTGCACTGCTGTTGt 3'
|
259 - 285
|
130.00 |
-17.70 |
|
DRVs in gene 3'UTRs |
|
SNPs in gene 3'UTRs |
|