pre-miRNA Information
pre-miRNA hsa-mir-1306   
Genomic Coordinates chr22: 20086058 - 20086142
Synonyms MIRN1306, hsa-mir-1306, MIR1306
Description Homo sapiens miR-1306 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-1306-5p
Sequence 15| CCACCUCCCCUGCAAACGUCCA |36
Evidence Not_experimental
Experiments
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSM5858927 8 COSMIC
COSM8222405 15 COSMIC
COSM1032175 17 COSMIC
COSM122562 22 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1197492175 14 dbSNP
rs1245517093 17 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol C21orf62   
Synonyms B37, C21orf120, PRED81
Description chromosome 21 open reading frame 62
Transcript NM_001162495   
Other Transcripts NM_001162496 , NM_019596   
Expression
Putative miRNA Targets on C21orf62
3'UTR of C21orf62
(miRNA target sites are highlighted)
>C21orf62|NM_001162495|3'UTR
   1 CATAATAACTGTGTCCAGCTGCCTGGAACTTTGGCAAATGATGAATAATTTGCAGAAGGAATCTGGAAATAAGGCCGTGA
  81 GATAGGTATCCCTACCCACAACTGTGCCTCTCTCCGCAGGCTCCATTTGCAACACAGCCACACATACCAATAACCAGCTC
 161 TCTGTTCTGCTCTGTGCCCAACTGCGAGAACACTTTTGAAAAACAAAAGAAAAAGAAACCAAAAAACCAACTTGATTCCG
 241 TCCAGGGACATGTCTTGGGAGCCAGCTAGGCTTGGTCTCTGCAACTAGAAGCCTGCAGGGAAATGTCCCGTCAGAAATGG
 321 AGAAAGCAATACACCCTAGAGACTGCTTAGTGGAGCTCCTCCTAGAAGGTGACCCCCAAGAAACATATCTTCTTTCAAAA
 401 TACTGCCTTAATTTTTTTCTGTTTCATTTTGTGAAATTGCTTGGAATTCCCCTAAGTAGAGAATAATCAATTTCAGAGGT
 481 TTGGGGACTATGAGTTTTATAAAATGGTCGGGCACAGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGG
 561 GCGGATCACCTGAGGTCGGGAGTTCAAGACCAGCCTGACCAACATGGAGAAACCCCATCTCTACTAAAAATACAAAATTA
 641 GCCGGGCATGGTGGCACATGCCTGTAATCCCAGCTACTCGGAGGCTGAGCAGGAGAATCGCTTGAACCTGGGAGGCGGAG
 721 GTTGCAGTGAGCCAAAATCGTGCCACTGCACTCTACACTCCAGCCTGGGTGACAGAGTCAGAGATCACACCATTGCACTC
 801 CAGCCTGGGCAACAAGAGCGAAACTCCATCTCAAAAAAAAAAAAAATAATAATAATAAAATGATTAGGTTCTCTTAAACT
 881 GATCTTTTCTAAATACCTTGCTAAGAATAGATGCACCAAGAAATAAGAGGTTGGAGACTGTGTTTGTTGGGGTGGAGGTA
 961 CCACAGGCATGGATAGGGTAAGACCTTAGGATCAAATGGGGGGACCAGTGTTCCAGAGAGAGGGATGCAGCAGTGAAAAT
1041 TGGAGGACACAAAACACATTTGCATCTATCTCAAAATTTTGCTTAGAGCACAGCCTAACTGCAAGGAAAGTTCTTCACTT
1121 CTAGCCTTTCACATTCTTTTCCTTTTCTTTCTTTGCATGGTCTGTCTTTGCCCCTGCTATACCATTTCACCAATTTCTCT
1201 TCTCATTTTCATCTTCTTTCTCCTACTCCTTTTCCTCTTGCTCCAAAAATCAGAACTTAGATGAATACCATTCAAGCTAT
1281 GTTTAACTACATTAGGGGCTAGCCTGGGAATTTACTCACCACTTACAACATTATTTCTATTGTTAAAAGTGCTCAAATTA
1361 TTAACAGATAATTAACAAAAAAACATCTAAGGCTCAATCCATTTGGAAGGTTAAGATTGCAAAGTGAAGGCATTTTATAT
1441 GACACGGTTAACACAAAATGATTTTATGTGTGCTGATAAAAGGAACCAAAGCAACATACTTTTGAAAAAATTAAATGGAT
1521 TCATTATTGTACAAAGAAAATTTTCCCTCATAGAGACGCAACTTGCCATTAAAGTGGACTGTAAAGAATCCATGGCTTGG
1601 GAGGCCGAGGCAGGCGGATCACCTGAGGTCGGGAGTTCGAGACCAGCCTGACCAACATGGAGAAACCCTGTCTCTACTAA
1681 AAATACAAAATAAGCCAGGCGTGGTGGTGCATGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAGTCACTTGA
1761 ACCTGGGAGGCGGAGGTTGCAGTGAGCCAAGATTGCGCCACTGCACTCCAGCCTGGGCAACAAGAGCAAAACTCCATCTC
1841 AAAAAAAAAAAAAGAAAAGAAAAAAGAATCCACTGCAATTGTGATACAAATGTCTAAACCTGGAGTGGAATGAATTTGAA
1921 ACATTATTGCATTCATGATACCATAATGATAAGAAATAGTCCATGACTTAACAGGATATCCTGGGGTTGATGACTTTAGA
2001 TCACATACATCACTTTTTTTTTTTTTTCACTTAACCTTAACATAGAGTAACTGAAATAATCTGCAATTTCTACATTTGCT
2081 TAATTGGTGGGGGATTTAGCCATTCAGGCTAATTAGCATGAGCCCATGTCAGTGTTTAAATTAGGCCAAAACAAAGACCA
2161 AAGTATGAATTTTAATAGAAAAATGTGACCTCATTACTGACATTGTACTGCAGATAATGTTAAAGTGAAAGAAAAAATAA
2241 GGAAAAGGGGAAAAAGGAGGAAAAAGGAAAGCAAGAAAAGACAAGTGAAAAGATTAGTAATATATTCATTGTCATTAGTT
2321 ACTGAAAATATAACAAATTGAATTTTAATAATTTTTATTAATAAAGTATAAAATTAAATGATGATAGAAAGTATATGCCT
2401 CCTATAAATATCTTCCATTTGGTAGCTTTTAATAGTTTCAAAGCCCTTTCACATATGTTTTAAGTAAGTCTTTTGAGAAA
2481 TACTTGTGAGTTAATGGGACTTAAACCAACAGAAAAGGAAAGCTAATTTAGTTATAAATCAAGCCTGAGGTTTCAGATTT
2561 CTGGACTAAAAATATGGTTCAGTTTGTGCTGCTGTGGGATGAAGAATGGGCAGAGAAAATCCACAGTGCAGGCATGGGGA
2641 TTAATGGCATTTGGCACTTAGCTGCAGGGTTTGGGGGACAACAGGGAGTGGTGGGATGGTGGTTAAGTAAGGGTGCATGC
2721 CCCACCTGAAGCTCTACAGTGGCTCAGCTCCAACTGAGTGTTGCCATGGGAAAATCTGATGGGGCCAGATCTGATCCTTC
2801 AGAGAATGAGGAATTCCAGGTTGTTATGTGAATTCTCACAATTTGTAAATGTCGGCTTGCCATTCAGCTTTTTTGTTTGT
2881 TTGTTTTAAATAATATCATGTGGGTCAAACAAACTATGTTAATGGTAGCCATCTGGCCTGGGGCTAGTAGCTTATTGCCT
2961 CTGGCCAGTGGTGTGCTAACAAAAGTTTAACCAGCAGCTCTCCAACAAAAAAGGGAGGTGGGCTGCTCTGCCTATGCAGT
3041 AGCCATGCTTTTATTCCTTTACTTTGTTAATAAACTTGCTTTCACTTTAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' accugcaaacgUCCCCUCCACc 5'
                     | |||||||| 
Target 5' ctccaacaaaaAAGGGAGGTGg 3'
3000 - 3021 147.00 -19.10
2
miRNA  3' acCUG---CAAACGUCC---CCUCCAcc 5'
            |||   |||||: ||   ||||||  
Target 5' gaGACTGTGTTTGTTGGGGTGGAGGTac 3'
934 - 961 144.00 -20.30
3
miRNA  3' acCUGCAAACGUCC-CCUCCAcc 5'
            ||   | | ||| ||||||  
Target 5' ttGAACCTGGGAGGCGGAGGTtg 3'
702 - 724 132.00 -17.10
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30133342 3 COSMIC
COSN24315573 26 COSMIC
COSN30522566 32 COSMIC
COSN28776931 35 COSMIC
COSN8407882 52 COSMIC
COSM8794362 75 COSMIC
COSN31510270 76 COSMIC
COSN30193694 96 COSMIC
COSN507278 115 COSMIC
COSN24307285 116 COSMIC
COSN30139651 119 COSMIC
COSN30154057 167 COSMIC
COSN30180482 168 COSMIC
COSN30728224 181 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1192411805 2 dbSNP
rs375164231 9 dbSNP
rs752201249 15 dbSNP
rs1314231299 16 dbSNP
rs752207127 17 dbSNP
rs1011809864 18 dbSNP
rs767430057 21 dbSNP
rs535418618 22 dbSNP
rs1439914772 24 dbSNP
rs774246169 32 dbSNP
rs1352267898 40 dbSNP
rs770869916 42 dbSNP
rs764728493 46 dbSNP
rs376124156 47 dbSNP
rs773532965 48 dbSNP
rs769981563 49 dbSNP
rs1025694172 50 dbSNP
rs1291870380 54 dbSNP
rs778965115 54 dbSNP
rs748249766 55 dbSNP
rs781148411 62 dbSNP
rs769143331 64 dbSNP
rs372600850 76 dbSNP
rs780348377 77 dbSNP
rs1178230464 78 dbSNP
rs1209378523 81 dbSNP
rs937218888 85 dbSNP
rs1433251697 93 dbSNP
rs758740610 94 dbSNP
rs750827168 95 dbSNP
rs1489037713 96 dbSNP
rs1486399041 101 dbSNP
rs1186362931 103 dbSNP
rs1263515453 105 dbSNP
rs368511326 106 dbSNP
rs929996846 107 dbSNP
rs755735083 109 dbSNP
rs1395182766 111 dbSNP
rs375024046 113 dbSNP
rs766964726 115 dbSNP
rs759495278 116 dbSNP
rs751517863 117 dbSNP
rs766456419 121 dbSNP
rs370140004 123 dbSNP
rs773203324 124 dbSNP
rs1399164520 125 dbSNP
rs138552991 131 dbSNP
rs1304386970 132 dbSNP
rs570939971 134 dbSNP
rs776735696 136 dbSNP
rs1347256701 137 dbSNP
rs1289957880 141 dbSNP
rs1225693593 147 dbSNP
rs1286423013 150 dbSNP
rs1374409809 154 dbSNP
rs1318104859 158 dbSNP
rs941523038 159 dbSNP
rs911355820 160 dbSNP
rs1052779189 169 dbSNP
rs985635612 170 dbSNP
rs1253169336 174 dbSNP
rs552831765 175 dbSNP
rs529641762 185 dbSNP
rs574473392 186 dbSNP
rs1304905761 191 dbSNP
rs1044323449 205 dbSNP
rs948643899 206 dbSNP
rs2231391 209 dbSNP
rs1370613756 218 dbSNP
rs1438959191 219 dbSNP
rs1281391308 221 dbSNP
rs1364740407 227 dbSNP
rs975730511 235 dbSNP
rs1223741374 236 dbSNP
rs113251491 239 dbSNP
rs548971378 240 dbSNP
rs918687683 246 dbSNP
rs972797395 249 dbSNP
rs1020444296 265 dbSNP
rs548906741 268 dbSNP
rs965566215 270 dbSNP
rs1176243681 288 dbSNP
rs4817501 294 dbSNP
rs892878547 295 dbSNP
rs1176560068 298 dbSNP
rs1405610940 299 dbSNP
rs1034151392 300 dbSNP
rs985586431 309 dbSNP
rs747372360 310 dbSNP
rs1001335694 327 dbSNP
rs1460101381 334 dbSNP
rs1021847273 335 dbSNP
rs1267360049 339 dbSNP
rs1011674294 348 dbSNP
rs907104922 352 dbSNP
rs1277854800 355 dbSNP
rs559343672 359 dbSNP
rs759881459 364 dbSNP
rs373448292 374 dbSNP
rs754023476 376 dbSNP
rs897194296 383 dbSNP
rs1333093309 388 dbSNP
rs1207719650 390 dbSNP
rs1031411621 392 dbSNP
rs1002568758 404 dbSNP
rs1317868402 408 dbSNP
rs907085280 410 dbSNP
rs1044212648 414 dbSNP
rs1283889943 421 dbSNP
rs1038780205 427 dbSNP
rs540756086 444 dbSNP
rs371362639 449 dbSNP
rs1471655513 450 dbSNP
rs62214287 464 dbSNP
rs558812260 468 dbSNP
rs931332145 470 dbSNP
rs1409596894 479 dbSNP
rs934173241 482 dbSNP
rs922838592 483 dbSNP
rs1415968062 491 dbSNP
rs978370759 492 dbSNP
rs967443702 500 dbSNP
rs1353964643 504 dbSNP
rs1344877738 506 dbSNP
rs1019908096 509 dbSNP
rs944105004 510 dbSNP
rs1432692127 515 dbSNP
rs990229420 518 dbSNP
rs1157952030 520 dbSNP
rs954211498 536 dbSNP
rs1022318395 540 dbSNP
rs957114356 545 dbSNP
rs373178684 553 dbSNP
rs1007469512 554 dbSNP
rs1034531660 558 dbSNP
rs564662191 559 dbSNP
rs907073775 562 dbSNP
rs1024174289 563 dbSNP
rs889006576 565 dbSNP
rs866310146 566 dbSNP
rs1435352382 567 dbSNP
rs186613890 571 dbSNP
rs1374244783 575 dbSNP
rs1032863395 576 dbSNP
rs368887202 577 dbSNP
rs534077064 578 dbSNP
rs1049869710 580 dbSNP
rs1429619544 590 dbSNP
rs1486412803 595 dbSNP
rs1294875292 596 dbSNP
rs1002455715 603 dbSNP
rs1241853768 605 dbSNP
rs934137232 615 dbSNP
rs1278980474 617 dbSNP
rs1342849931 618 dbSNP
rs1206793498 621 dbSNP
rs1262204274 624 dbSNP
rs922802623 626 dbSNP
rs906970633 629 dbSNP
rs566691800 631 dbSNP
rs945613033 638 dbSNP
rs1013184511 642 dbSNP
rs575841966 643 dbSNP
rs989807809 644 dbSNP
rs1263977349 647 dbSNP
rs1223024510 648 dbSNP
rs887601669 651 dbSNP
rs1049481110 653 dbSNP
rs1455916578 660 dbSNP
rs1321468697 661 dbSNP
rs144634301 664 dbSNP
rs1216215635 668 dbSNP
rs1441160428 677 dbSNP
rs897200633 680 dbSNP
rs1328810333 689 dbSNP
rs772117609 693 dbSNP
rs1261176744 699 dbSNP
rs560516947 700 dbSNP
rs1432616088 701 dbSNP
rs113939746 707 dbSNP
rs1469111678 711 dbSNP
rs138255407 714 dbSNP
rs1265390156 716 dbSNP
rs1024058526 717 dbSNP
rs553365962 721 dbSNP
rs1363793784 729 dbSNP
rs1173204017 740 dbSNP
rs985542647 746 dbSNP
rs1167617500 748 dbSNP
rs866388507 750 dbSNP
rs182845395 751 dbSNP
rs1292529397 753 dbSNP
rs1387962350 755 dbSNP
rs914738344 769 dbSNP
rs1307075144 770 dbSNP
rs990845911 771 dbSNP
rs1187131942 772 dbSNP
rs1017290858 778 dbSNP
rs1294945070 783 dbSNP
rs1446789167 785 dbSNP
rs1005540721 786 dbSNP
rs956294150 788 dbSNP
rs1203216750 791 dbSNP
rs150449358 797 dbSNP
rs1481738515 799 dbSNP
rs372240206 800 dbSNP
rs1249887755 803 dbSNP
rs1482335443 810 dbSNP
rs924833674 810 dbSNP
rs1190650227 816 dbSNP
rs889820856 819 dbSNP
rs1049835206 820 dbSNP
rs971014964 828 dbSNP
rs1463186965 829 dbSNP
rs1456892658 832 dbSNP
rs1022694922 839 dbSNP
rs202168574 842 dbSNP
rs1204583405 843 dbSNP
rs901264565 843 dbSNP
rs34514035 844 dbSNP
rs7277298 844 dbSNP
rs112216086 845 dbSNP
rs1042550039 846 dbSNP
rs72230431 846 dbSNP
rs1213656230 847 dbSNP
rs1491451394 847 dbSNP
rs201973808 847 dbSNP
rs761941441 847 dbSNP
rs867045317 847 dbSNP
rs1384701294 848 dbSNP
rs1389035728 849 dbSNP
rs1339023666 850 dbSNP
rs915477645 850 dbSNP
rs1376056602 852 dbSNP
rs993701235 853 dbSNP
rs1054474272 856 dbSNP
rs200903085 859 dbSNP
rs868041960 860 dbSNP
rs544002187 868 dbSNP
rs1008254371 871 dbSNP
rs891118873 873 dbSNP
rs1462039977 876 dbSNP
rs769479092 885 dbSNP
rs971093292 890 dbSNP
rs1354540175 891 dbSNP
rs1167234455 903 dbSNP
rs140567202 905 dbSNP
rs917016191 907 dbSNP
rs972575855 908 dbSNP
rs1386208111 912 dbSNP
rs74803729 916 dbSNP
rs1016846367 917 dbSNP
rs1183227530 930 dbSNP
rs1447269067 931 dbSNP
rs1195010886 932 dbSNP
rs549827517 946 dbSNP
rs531714260 947 dbSNP
rs1252907601 948 dbSNP
rs776674947 953 dbSNP
rs372762206 961 dbSNP
rs1454058547 968 dbSNP
rs1319634400 980 dbSNP
rs934802642 982 dbSNP
rs924884419 984 dbSNP
rs953943594 990 dbSNP
rs570264157 998 dbSNP
rs540861844 1002 dbSNP
rs971068596 1007 dbSNP
rs190018093 1016 dbSNP
rs770667677 1017 dbSNP
rs1463301000 1020 dbSNP
rs1386772646 1025 dbSNP
rs1253112862 1028 dbSNP
rs565519621 1032 dbSNP
rs879589417 1033 dbSNP
rs547343337 1040 dbSNP
rs1419585173 1042 dbSNP
rs1158205993 1048 dbSNP
rs1386139021 1050 dbSNP
rs576172507 1055 dbSNP
rs993347423 1056 dbSNP
rs777471486 1065 dbSNP
rs532028164 1068 dbSNP
rs1434489171 1069 dbSNP
rs1281340147 1081 dbSNP
rs1374759627 1083 dbSNP
rs13051248 1086 dbSNP
rs1009723877 1100 dbSNP
rs564597846 1109 dbSNP
rs893998922 1120 dbSNP
rs757964961 1125 dbSNP
rs938229174 1135 dbSNP
rs546023023 1136 dbSNP
rs891171680 1142 dbSNP
rs1290068510 1156 dbSNP
rs1049753629 1157 dbSNP
rs1044017902 1174 dbSNP
rs1218813234 1175 dbSNP
rs1371922046 1182 dbSNP
rs1483362492 1193 dbSNP
rs949746400 1196 dbSNP
rs893234498 1197 dbSNP
rs1476031788 1199 dbSNP
rs1427030802 1212 dbSNP
rs543117725 1213 dbSNP
rs1165930300 1216 dbSNP
rs1413417725 1220 dbSNP
rs1054924425 1228 dbSNP
rs17696057 1241 dbSNP
rs1355149777 1250 dbSNP
rs924771547 1270 dbSNP
rs1306658614 1276 dbSNP
rs867212994 1277 dbSNP
rs560789142 1280 dbSNP
rs1234361133 1287 dbSNP
rs972927013 1294 dbSNP
rs1283956103 1298 dbSNP
rs1469150386 1303 dbSNP
rs1456707747 1312 dbSNP
rs1365799959 1315 dbSNP
rs1045999391 1317 dbSNP
rs1483068341 1319 dbSNP
rs1418604026 1322 dbSNP
rs1249667437 1351 dbSNP
rs1204363984 1360 dbSNP
rs1249445234 1365 dbSNP
rs950302114 1385 dbSNP
rs939865505 1389 dbSNP
rs1236652901 1391 dbSNP
rs1490803872 1396 dbSNP
rs909669804 1405 dbSNP
rs542542290 1412 dbSNP
rs1353955871 1417 dbSNP
rs779420258 1420 dbSNP
rs1262145110 1433 dbSNP
rs1429117302 1435 dbSNP
rs1166795986 1439 dbSNP
rs1377855290 1442 dbSNP
rs1239262295 1445 dbSNP
rs572332578 1446 dbSNP
rs1285843823 1447 dbSNP
rs991182138 1454 dbSNP
rs930280237 1460 dbSNP
rs1445385546 1461 dbSNP
rs976731869 1470 dbSNP
rs1271513845 1478 dbSNP
rs1342261038 1478 dbSNP
rs965400054 1490 dbSNP
rs971792183 1499 dbSNP
rs553801926 1502 dbSNP
rs541380347 1507 dbSNP
rs1429700600 1511 dbSNP
rs1277684032 1517 dbSNP
rs1440426729 1527 dbSNP
rs560670832 1528 dbSNP
rs559042806 1531 dbSNP
rs1449080841 1539 dbSNP
rs1186806094 1543 dbSNP
rs376336894 1557 dbSNP
rs1303040072 1558 dbSNP
rs1172451870 1561 dbSNP
rs893898555 1568 dbSNP
rs987262320 1572 dbSNP
rs1402734789 1575 dbSNP
rs1319385247 1577 dbSNP
rs1387538635 1581 dbSNP
rs953329029 1582 dbSNP
rs760936008 1593 dbSNP
rs1372480324 1594 dbSNP
rs996877727 1594 dbSNP
rs1233900207 1597 dbSNP
rs893109168 1606 dbSNP
rs542514869 1607 dbSNP
rs1268498298 1615 dbSNP
rs537586651 1616 dbSNP
rs1207010940 1620 dbSNP
rs1178749951 1628 dbSNP
rs1046658246 1630 dbSNP
rs151323511 1631 dbSNP
rs895523765 1633 dbSNP
rs1036699871 1635 dbSNP
rs1160424573 1638 dbSNP
rs896469174 1639 dbSNP
rs113179155 1643 dbSNP
rs894744300 1653 dbSNP
rs1263502505 1662 dbSNP
rs1392270309 1666 dbSNP
rs1205367779 1674 dbSNP
rs1056430360 1683 dbSNP
rs939733711 1695 dbSNP
rs536470576 1698 dbSNP
rs909647611 1700 dbSNP
rs566330579 1701 dbSNP
rs1241055441 1707 dbSNP
rs932497927 1710 dbSNP
rs1224859160 1711 dbSNP
rs1288779626 1712 dbSNP
rs547786628 1715 dbSNP
rs1328165304 1719 dbSNP
rs921170520 1721 dbSNP
rs976700630 1722 dbSNP
rs1275207640 1724 dbSNP
rs1323590867 1729 dbSNP
rs965369180 1736 dbSNP
rs1021340363 1737 dbSNP
rs775301058 1738 dbSNP
rs971846230 1739 dbSNP
rs1411706523 1744 dbSNP
rs958339077 1747 dbSNP
rs1328571029 1748 dbSNP
rs1167549652 1750 dbSNP
rs1319330316 1752 dbSNP
rs1458079007 1754 dbSNP
rs1032449992 1771 dbSNP
rs1002313465 1772 dbSNP
rs1411608057 1775 dbSNP
rs1386814052 1777 dbSNP
rs1308495815 1780 dbSNP
rs1349654816 1782 dbSNP
rs1407838226 1791 dbSNP
rs185201443 1792 dbSNP
rs760402697 1794 dbSNP
rs1025176195 1796 dbSNP
rs574314408 1797 dbSNP
rs1206508053 1803 dbSNP
rs1028934033 1805 dbSNP
rs1190580268 1810 dbSNP
rs549456666 1811 dbSNP
rs1171929960 1815 dbSNP
rs1476966941 1821 dbSNP
rs1374711094 1824 dbSNP
rs1193711017 1825 dbSNP
rs1448609267 1826 dbSNP
rs1245862695 1827 dbSNP
rs1431028870 1832 dbSNP
rs1205115064 1836 dbSNP
rs531338510 1837 dbSNP
rs1369934691 1838 dbSNP
rs1407896573 1840 dbSNP
rs1304413591 1849 dbSNP
rs1379563686 1853 dbSNP
rs1310766126 1854 dbSNP
rs1395685859 1854 dbSNP
rs957429710 1854 dbSNP
rs1277214762 1856 dbSNP
rs1340718851 1860 dbSNP
rs1037078148 1861 dbSNP
rs1032974475 1864 dbSNP
rs556212885 1865 dbSNP
rs888176496 1879 dbSNP
rs180807552 1885 dbSNP
rs375178149 1887 dbSNP
rs1450928194 1896 dbSNP
rs1228182586 1902 dbSNP
rs894619033 1905 dbSNP
rs560726582 1912 dbSNP
rs1040902196 1916 dbSNP
rs1178073179 1925 dbSNP
rs943907076 1939 dbSNP
rs913837021 1946 dbSNP
rs542778887 1947 dbSNP
rs544300700 1951 dbSNP
rs1036037506 1959 dbSNP
rs1391178046 1964 dbSNP
rs1332341723 1974 dbSNP
rs1411722165 1976 dbSNP
rs940308826 1981 dbSNP
rs1398592825 1984 dbSNP
rs759279771 1985 dbSNP
rs1302500047 1986 dbSNP
rs35294464 1989 dbSNP
rs527508404 1989 dbSNP
rs925349615 1991 dbSNP
rs980859667 1992 dbSNP
rs1270388608 1998 dbSNP
rs560352783 1999 dbSNP
rs1466005503 2002 dbSNP
rs969445533 2004 dbSNP
rs1208922192 2006 dbSNP
rs1246896591 2014 dbSNP
rs1447060394 2027 dbSNP
rs1192427390 2028 dbSNP
rs1332654982 2028 dbSNP
rs1425861442 2028 dbSNP
rs768803653 2028 dbSNP
rs879233697 2028 dbSNP
rs931863733 2028 dbSNP
rs1185059762 2029 dbSNP
rs1320068251 2029 dbSNP
rs1444808436 2030 dbSNP
rs1236526507 2031 dbSNP
rs1386546841 2037 dbSNP
rs776529035 2042 dbSNP
rs1294177646 2046 dbSNP
rs1013723171 2051 dbSNP
rs1274385338 2060 dbSNP
rs544976717 2062 dbSNP
rs1290631483 2065 dbSNP
rs989453396 2083 dbSNP
rs958199780 2084 dbSNP
rs1267177472 2087 dbSNP
rs751314457 2089 dbSNP
rs1294328168 2092 dbSNP
rs1015201147 2099 dbSNP
rs1004274219 2109 dbSNP
rs1247155820 2113 dbSNP
rs1189353164 2125 dbSNP
rs1413915782 2127 dbSNP
rs1472755561 2129 dbSNP
rs888154213 2141 dbSNP
rs1410104621 2156 dbSNP
rs1048170583 2158 dbSNP
rs996558132 2159 dbSNP
rs1165620937 2166 dbSNP
rs865975562 2170 dbSNP
rs770823127 2176 dbSNP
rs1434975285 2178 dbSNP
rs1040876276 2180 dbSNP
rs577304220 2189 dbSNP
rs1351639901 2197 dbSNP
rs1014745340 2203 dbSNP
rs1286827738 2208 dbSNP
rs1348153812 2214 dbSNP
rs746714114 2218 dbSNP
rs1229639684 2220 dbSNP
rs1290001585 2225 dbSNP
rs1336371371 2226 dbSNP
rs1220162023 2232 dbSNP
rs1253970132 2233 dbSNP
rs1483335957 2238 dbSNP
rs1308590005 2243 dbSNP
rs565316397 2251 dbSNP
rs1052396151 2261 dbSNP
rs936663000 2275 dbSNP
rs1473916199 2280 dbSNP
rs925267059 2281 dbSNP
rs1165305729 2282 dbSNP
rs1405739700 2287 dbSNP
rs777561521 2293 dbSNP
rs189506706 2299 dbSNP
rs771724382 2305 dbSNP
rs1371766906 2308 dbSNP
rs992270726 2312 dbSNP
rs1429637985 2314 dbSNP
rs962267694 2320 dbSNP
rs2833956 2331 dbSNP
rs1470892265 2340 dbSNP
rs1449789019 2343 dbSNP
rs1284358986 2348 dbSNP
rs1232884211 2358 dbSNP
rs1182105918 2362 dbSNP
rs1482393363 2379 dbSNP
rs1036591483 2380 dbSNP
rs1342834918 2382 dbSNP
rs1271676348 2386 dbSNP
rs1223736683 2391 dbSNP
rs1270651306 2392 dbSNP
rs186993285 2394 dbSNP
rs1321469571 2396 dbSNP
rs554783342 2398 dbSNP
rs952401160 2405 dbSNP
rs1442984118 2415 dbSNP
rs1026618062 2421 dbSNP
rs890114458 2422 dbSNP
rs16989777 2425 dbSNP
rs899565484 2426 dbSNP
rs1449414484 2435 dbSNP
rs1167194131 2446 dbSNP
rs1287744808 2447 dbSNP
rs1415473148 2452 dbSNP
rs1226639358 2453 dbSNP
rs1358271337 2461 dbSNP
rs182012591 2464 dbSNP
rs142317078 2466 dbSNP
rs1299215997 2469 dbSNP
rs189858138 2470 dbSNP
rs892337370 2479 dbSNP
rs1052700029 2490 dbSNP
rs1436992875 2502 dbSNP
rs936565817 2505 dbSNP
rs570894337 2508 dbSNP
rs549393534 2510 dbSNP
rs1270121318 2511 dbSNP
rs1054039123 2522 dbSNP
rs1321212728 2540 dbSNP
rs184976176 2543 dbSNP
rs923880755 2547 dbSNP
rs1402023713 2548 dbSNP
rs756468495 2550 dbSNP
rs1045023712 2555 dbSNP
rs1191115376 2563 dbSNP
rs1379943570 2568 dbSNP
rs1478632437 2572 dbSNP
rs967385122 2575 dbSNP
rs1412234377 2579 dbSNP
rs1467928627 2580 dbSNP
rs750651162 2582 dbSNP
rs917989886 2586 dbSNP
rs992291567 2602 dbSNP
rs1433788313 2607 dbSNP
rs1315585272 2609 dbSNP
rs1432140996 2632 dbSNP
rs1192229166 2634 dbSNP
rs1332798886 2636 dbSNP
rs2833955 2642 dbSNP
rs959049954 2645 dbSNP
rs539375339 2647 dbSNP
rs985371573 2648 dbSNP
rs1464605296 2651 dbSNP
rs1218232572 2659 dbSNP
rs995432359 2663 dbSNP
rs952306370 2666 dbSNP
rs1029271724 2676 dbSNP
rs963521807 2679 dbSNP
rs759103924 2689 dbSNP
rs963739461 2692 dbSNP
rs1325731433 2693 dbSNP
rs147670206 2699 dbSNP
rs1007937567 2708 dbSNP
rs1005130388 2716 dbSNP
rs560133091 2735 dbSNP
rs1452564821 2753 dbSNP
rs1156333946 2756 dbSNP
rs1051872307 2771 dbSNP
rs111613966 2783 dbSNP
rs1387289686 2788 dbSNP
rs1302392187 2789 dbSNP
rs145414607 2796 dbSNP
rs1366652971 2798 dbSNP
rs1272915661 2799 dbSNP
rs1411498394 2803 dbSNP
rs533295628 2817 dbSNP
rs1288727089 2823 dbSNP
rs1328800310 2826 dbSNP
rs562795170 2827 dbSNP
rs1267328155 2830 dbSNP
rs1319445961 2839 dbSNP
rs900264744 2844 dbSNP
rs1001127368 2845 dbSNP
rs1290303776 2850 dbSNP
rs751617662 2853 dbSNP
rs148539862 2854 dbSNP
rs1418170413 2858 dbSNP
rs1179151995 2862 dbSNP
rs936535573 2869 dbSNP
rs1162366555 2873 dbSNP
rs538401662 2874 dbSNP
rs1042323807 2875 dbSNP
rs1433057988 2876 dbSNP
rs1308445786 2879 dbSNP
rs1372282940 2883 dbSNP
rs750035517 2887 dbSNP
rs917798436 2896 dbSNP
rs1341292353 2897 dbSNP
rs1244216880 2899 dbSNP
rs1289643198 2900 dbSNP
rs1344974714 2903 dbSNP
rs993250307 2920 dbSNP
rs759563156 2923 dbSNP
rs1274384876 2943 dbSNP
rs113221600 2944 dbSNP
rs561387606 2958 dbSNP
rs973500600 2959 dbSNP
rs963574134 2962 dbSNP
rs896531524 2963 dbSNP
rs983580608 2967 dbSNP
rs1169079775 2987 dbSNP
rs1353714486 2995 dbSNP
rs954951239 3017 dbSNP
rs542802094 3018 dbSNP
rs1403230576 3019 dbSNP
rs940752287 3021 dbSNP
rs1256597351 3022 dbSNP
rs1209486552 3025 dbSNP
rs572591563 3028 dbSNP
rs984958624 3037 dbSNP
rs1229788920 3039 dbSNP
rs900151229 3042 dbSNP
rs1216155326 3047 dbSNP
rs1365597763 3055 dbSNP
rs930827509 3059 dbSNP
rs1296455861 3066 dbSNP
rs1432354346 3067 dbSNP
rs79168354 3070 dbSNP
rs1235955117 3073 dbSNP
rs1302982322 3080 dbSNP
rs1000566956 3089 dbSNP
rs538923234 3090 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084064. RNA binding protein: AGO2. Condition:CLIP_noemetine_AbnovaAb HITS-CLIP data was present in GSM1084065. RNA binding protein: AGO2. Condition:CLIP_emetine_AbnovaAb HITS-CLIP data was present in GSM1084073. RNA binding protein: AGO2. Condition:CLIP_hippuristanol_rep1_AbnovaAb HITS-CLIP data was present in GSM1084079. RNA binding protein: AGO2. Condition:CLIP_hippuristanol_rep2_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084064
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noemetine_AbnovaAb
Location of target site ENST00000536776.1 | 3UTR | AAAAAGGGAGGUGGGCUGC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1084065
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_emetine_AbnovaAb
Location of target site ENST00000536776.1 | 3UTR | AAAAGGGAGGUGGGCUGC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM1084073
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_hippuristanol_rep1_AbnovaAb
Location of target site ENST00000536776.1 | 3UTR | AAAAGGGAGGUGGGCUGC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM1084079
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_hippuristanol_rep2_AbnovaAb
Location of target site ENST00000536776.1 | 3UTR | AAAAGGGAGGUGGGCUGC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
184 hsa-miR-1306-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT089458 TET3 tet methylcytosine dioxygenase 3 2 2
MIRT167143 LHFPL2 LHFPL tetraspan subfamily member 2 2 2
MIRT290873 BCL10 B-cell CLL/lymphoma 10 2 2
MIRT320237 CYCS cytochrome c, somatic 2 2
MIRT462980 ZNF784 zinc finger protein 784 2 2
MIRT478039 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT479102 CNNM4 cyclin and CBS domain divalent metal cation transport mediator 4 2 4
MIRT482763 TMEM126B transmembrane protein 126B 2 2
MIRT489972 MCC mutated in colorectal cancers 2 4
MIRT495484 TNFAIP2 TNF alpha induced protein 2 2 2
MIRT496148 GPS1 G protein pathway suppressor 1 2 2
MIRT523370 GSR glutathione-disulfide reductase 2 2
MIRT526299 SORCS2 sortilin related VPS10 domain containing receptor 2 2 4
MIRT527427 NRL neural retina leucine zipper 2 2
MIRT527860 SMOC1 SPARC related modular calcium binding 1 2 6
MIRT529685 FBXL19 F-box and leucine rich repeat protein 19 2 2
MIRT531526 NOM1 nucleolar protein with MIF4G domain 1 2 2
MIRT532461 PLGRKT plasminogen receptor with a C-terminal lysine 2 2
MIRT532519 KCNN1 potassium calcium-activated channel subfamily N member 1 2 2
MIRT532668 APOBEC3D apolipoprotein B mRNA editing enzyme catalytic subunit 3D 2 2
MIRT532718 SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 2 2
MIRT533205 WAPAL WAPL cohesin release factor 2 2
MIRT536480 KIAA1549 KIAA1549 2 2
MIRT537158 GID8 GID complex subunit 8 homolog 2 2
MIRT539307 AKIRIN1 akirin 1 2 2
MIRT539569 CNKSR3 CNKSR family member 3 2 4
MIRT540045 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 4
MIRT540235 SAMD5 sterile alpha motif domain containing 5 2 2
MIRT543016 CRK CRK proto-oncogene, adaptor protein 2 2
MIRT551436 F2 coagulation factor II, thrombin 2 2
MIRT556146 MED12L mediator complex subunit 12 like 2 2
MIRT570714 DGKE diacylglycerol kinase epsilon 2 2
MIRT572037 GRWD1 glutamate rich WD repeat containing 1 2 2
MIRT572409 MRPS14 mitochondrial ribosomal protein S14 2 2
MIRT572660 AGMAT agmatinase 2 4
MIRT611450 NRIP3 nuclear receptor interacting protein 3 2 2
MIRT611601 JAKMIP3 Janus kinase and microtubule interacting protein 3 2 4
MIRT612208 TMEM109 transmembrane protein 109 2 2
MIRT612312 VSIG10 V-set and immunoglobulin domain containing 10 2 2
MIRT614146 MAFK MAF bZIP transcription factor K 2 2
MIRT617371 C21orf62 chromosome 21 open reading frame 62 2 2
MIRT617689 MAPKBP1 mitogen-activated protein kinase binding protein 1 2 2
MIRT618495 DENND5B DENN domain containing 5B 2 4
MIRT618802 SPATA21 spermatogenesis associated 21 2 2
MIRT619061 TTC4 tetratricopeptide repeat domain 4 2 2
MIRT619902 NPTXR neuronal pentraxin receptor 2 2
MIRT620080 DZIP1L DAZ interacting zinc finger protein 1 like 2 2
MIRT622233 SLC25A45 solute carrier family 25 member 45 2 2
MIRT625262 ZNF566 zinc finger protein 566 2 2
MIRT625725 CXorf38 chromosome X open reading frame 38 2 2
MIRT625813 POFUT1 protein O-fucosyltransferase 1 2 2
MIRT625839 NXPE2 neurexophilin and PC-esterase domain family member 2 2 2
MIRT626024 XRCC2 X-ray repair cross complementing 2 2 2
MIRT626054 PDE4C phosphodiesterase 4C 2 2
MIRT626082 CWF19L1 CWF19 like 1, cell cycle control (S. pombe) 2 2
MIRT626356 PACS1 phosphofurin acidic cluster sorting protein 1 2 2
MIRT626790 KCNK6 potassium two pore domain channel subfamily K member 6 2 2
MIRT627797 RAB11FIP1 RAB11 family interacting protein 1 2 2
MIRT628234 FAM212B family with sequence similarity 212 member B 2 2
MIRT628241 FADS1 fatty acid desaturase 1 2 2
MIRT628249 ETF1 eukaryotic translation termination factor 1 2 2
MIRT628799 A2ML1 alpha-2-macroglobulin like 1 2 2
MIRT628879 FAM177A1 family with sequence similarity 177 member A1 2 4
MIRT629333 ZNF487P zinc finger protein 487 1 1
MIRT629435 RPL34 ribosomal protein L34 2 2
MIRT629977 MRPL36 mitochondrial ribosomal protein L36 2 2
MIRT630727 FPR1 formyl peptide receptor 1 2 2
MIRT630776 MSANTD3 Myb/SANT DNA binding domain containing 3 2 2
MIRT631074 ZNF829 zinc finger protein 829 2 2
MIRT633139 C6orf132 chromosome 6 open reading frame 132 2 2
MIRT633178 AGO3 argonaute 3, RISC catalytic component 2 2
MIRT633510 RNF14 ring finger protein 14 2 2
MIRT633613 APCDD1 APC down-regulated 1 2 2
MIRT633668 MYO1F myosin IF 2 2
MIRT633707 LRRC8B leucine rich repeat containing 8 VRAC subunit B 2 2
MIRT633798 SOX7 SRY-box 7 2 2
MIRT634203 TMOD2 tropomodulin 2 2 4
MIRT634297 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT634509 NYAP2 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 2 2
MIRT634518 NKAP NFKB activating protein 2 2
MIRT634754 CRCP CGRP receptor component 2 2
MIRT635741 IFNAR1 interferon alpha and beta receptor subunit 1 2 2
MIRT636480 KLHL7 kelch like family member 7 2 2
MIRT637042 FITM2 fat storage inducing transmembrane protein 2 2 2
MIRT637748 POLR3K RNA polymerase III subunit K 2 2
MIRT638568 IFNE interferon epsilon 2 2
MIRT639155 TMEM167A transmembrane protein 167A 2 2
MIRT639848 ZBTB20 zinc finger and BTB domain containing 20 2 2
MIRT641770 ZNF207 zinc finger protein 207 2 2
MIRT642285 ZNF99 zinc finger protein 99 2 2
MIRT642685 KRT74 keratin 74 2 2
MIRT643530 ERAP2 endoplasmic reticulum aminopeptidase 2 2 2
MIRT643742 ZNF284 zinc finger protein 284 2 4
MIRT643945 WIPF3 WAS/WASL interacting protein family member 3 2 2
MIRT644320 NFKBID NFKB inhibitor delta 2 2
MIRT644383 ZNF286A zinc finger protein 286A 2 2
MIRT645130 HES2 hes family bHLH transcription factor 2 2 2
MIRT645607 PCDH11X protocadherin 11 X-linked 2 2
MIRT647121 ZNF446 zinc finger protein 446 2 2
MIRT648484 CMBL carboxymethylenebutenolidase homolog 2 2
MIRT648549 BBS5 Bardet-Biedl syndrome 5 2 2
MIRT649252 TRIM65 tripartite motif containing 65 2 2
MIRT649468 SLC10A7 solute carrier family 10 member 7 2 2
MIRT650013 KLB klotho beta 2 2
MIRT650068 CCDC134 coiled-coil domain containing 134 2 2
MIRT650325 RTN2 reticulon 2 2 2
MIRT651093 ZNF516 zinc finger protein 516 2 2
MIRT651265 ZKSCAN4 zinc finger with KRAB and SCAN domains 4 2 2
MIRT651272 ZKSCAN1 zinc finger with KRAB and SCAN domains 1 2 2
MIRT651402 ZBTB16 zinc finger and BTB domain containing 16 2 2
MIRT652163 TRIM66 tripartite motif containing 66 2 2
MIRT653153 SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 2 2
MIRT653477 SLC4A1 solute carrier family 4 member 1 (Diego blood group) 2 2
MIRT653922 SERPINC1 serpin family C member 1 2 2
MIRT654243 RNF115 ring finger protein 115 2 2
MIRT655354 PCDH11Y protocadherin 11 Y-linked 2 2
MIRT655958 NDST1 N-deacetylase and N-sulfotransferase 1 2 2
MIRT656318 MESDC1 talin rod domain containing 1 2 2
MIRT656578 LSM10 LSM10, U7 small nuclear RNA associated 2 2
MIRT657210 IKZF2 IKAROS family zinc finger 2 2 2
MIRT657856 GJB1 gap junction protein beta 1 2 2
MIRT658207 FBXO44 F-box protein 44 2 2
MIRT659003 DIAPH1 diaphanous related formin 1 2 2
MIRT659349 CSRP1 cysteine and glycine rich protein 1 2 2
MIRT659501 CISD3 CDGSH iron sulfur domain 3 2 2
MIRT659761 CCDC171 coiled-coil domain containing 171 2 2
MIRT660149 BRD4 bromodomain containing 4 2 2
MIRT661582 EPHX2 epoxide hydrolase 2 2 2
MIRT661753 ATM ATM serine/threonine kinase 2 2
MIRT662223 CCRL2 C-C motif chemokine receptor like 2 2 2
MIRT663883 CXorf56 chromosome X open reading frame 56 2 2
MIRT664308 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT664649 GALM galactose mutarotase 2 2
MIRT664671 L2HGDH L-2-hydroxyglutarate dehydrogenase 2 2
MIRT665050 C3 complement C3 2 2
MIRT666467 SCRG1 stimulator of chondrogenesis 1 2 2
MIRT666529 RNF170 ring finger protein 170 2 2
MIRT669118 CDC42BPG CDC42 binding protein kinase gamma 2 2
MIRT669311 C17orf75 chromosome 17 open reading frame 75 2 2
MIRT669358 BHLHE22 basic helix-loop-helix family member e22 2 2
MIRT669691 ABLIM1 actin binding LIM protein 1 2 2
MIRT674223 FAM120AOS family with sequence similarity 120A opposite strand 2 2
MIRT674766 QRSL1 glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 2 2
MIRT675207 ZNF554 zinc finger protein 554 2 2
MIRT675271 ZNF431 zinc finger protein 431 2 2
MIRT676265 PBOV1 prostate and breast cancer overexpressed 1 2 2
MIRT676573 VSIG1 V-set and immunoglobulin domain containing 1 2 2
MIRT677566 C19orf52 translocase of inner mitochondrial membrane 29 2 2
MIRT677631 ALG1 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase 2 2
MIRT678115 MICA MHC class I polypeptide-related sequence A 2 2
MIRT678694 RNF157 ring finger protein 157 2 2
MIRT679583 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT679621 MED28 mediator complex subunit 28 2 2
MIRT683700 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT683721 LACTB lactamase beta 2 2
MIRT690967 APOL1 apolipoprotein L1 2 2
MIRT691611 IPP intracisternal A particle-promoted polypeptide 2 2
MIRT702524 KCND3 potassium voltage-gated channel subfamily D member 3 2 2
MIRT704762 CDKN2AIPNL CDKN2A interacting protein N-terminal like 2 2
MIRT708738 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT708898 SKIDA1 SKI/DACH domain containing 1 2 2
MIRT709965 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT710373 GM2A GM2 ganglioside activator 2 2
MIRT710533 TMEM201 transmembrane protein 201 2 2
MIRT710582 HLCS holocarboxylase synthetase 2 2
MIRT711030 MBOAT2 membrane bound O-acyltransferase domain containing 2 2 2
MIRT712200 SHROOM4 shroom family member 4 2 2
MIRT713798 CPLX2 complexin 2 2 2
MIRT714096 ZNF486 zinc finger protein 486 2 2
MIRT714923 PPP1R12C protein phosphatase 1 regulatory subunit 12C 2 2
MIRT716518 TNPO2 transportin 2 2 2
MIRT716701 HLA-B major histocompatibility complex, class I, B 2 2
MIRT717070 MTMR6 myotubularin related protein 6 2 2
MIRT719561 CBL Cbl proto-oncogene 2 2
MIRT719688 ALDH1L2 aldehyde dehydrogenase 1 family member L2 2 2
MIRT720134 RIMKLA ribosomal modification protein rimK like family member A 2 2
MIRT720222 IPPK inositol-pentakisphosphate 2-kinase 2 2
MIRT720982 METTL21A methyltransferase like 21A 2 2
MIRT723821 PDS5A PDS5 cohesin associated factor A 2 2
MIRT723999 LMTK2 lemur tyrosine kinase 2 2 2
MIRT724963 PTK6 protein tyrosine kinase 6 2 2
MIRT725217 PEA15 phosphoprotein enriched in astrocytes 15 2 2
MIRT725262 PARVB parvin beta 2 2
MIRT755883 METTL14 methyltransferase like 14 3 1
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-1306 Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)
hsa-mir-1306 Fluorouracil 3385 NSC19893 approved resistant cell line (KYSE)
hsa-miR-1306-5p Imatinib 5291 NSC743414 approved resistant High Chronic Myelogenous Leukemia tissue
hsa-miR-1306-5p Paclitaxel 36314 NSC125973 approved sensitive cell line (HS578T)
hsa-miR-1306-5p Doxorubicin 31703 NSC123127 approved sensitive cell line (HS578T)
hsa-miR-1306-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-1306-5p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)

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