pre-miRNA Information
pre-miRNA hsa-mir-1306   
Genomic Coordinates chr22: 20086058 - 20086142
Synonyms MIRN1306, hsa-mir-1306, MIR1306
Description Homo sapiens miR-1306 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-1306-5p
Sequence 15| CCACCUCCCCUGCAAACGUCCA |36
Evidence Not_experimental
Experiments
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSM5858927 8 COSMIC
COSM8222405 15 COSMIC
COSM1032175 17 COSMIC
COSM122562 22 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1197492175 14 dbSNP
rs1245517093 17 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol MAPKBP1   
Synonyms JNKBP-1, JNKBP1, NPHP20
Description mitogen-activated protein kinase binding protein 1
Transcript NM_001128608   
Other Transcripts NM_014994   
Expression
Putative miRNA Targets on MAPKBP1
3'UTR of MAPKBP1
(miRNA target sites are highlighted)
>MAPKBP1|NM_001128608|3'UTR
   1 GTTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCCCCTCTGCCCCTCACCAAAACCTGCG
  81 GGGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAGAGGCAAAGCAGCCTTCCCAGCCGCTCCTCGTGGGGGGCCTGTA
 161 TTTATTAATTTATTTCCCTGACTGTTGCCTCACTTCCTTGGAACTCCTGCCTCCACAGCCCCTCCAGTGGCAGGGACAGG
 241 TCTTGGGTCTTTGTCATCTTGGTGCTGTGAGAGGTAGGAGGGCAGCCTGCCCCATCTAGGAATCTGGGAAGGGCTGGCCC
 321 TCTCTTAGAAGCCATTTGAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGGGGTCGAGGT
 401 GAGAGGTGATGTGGTATTCAGTGCCCGTCAGCCAACTGTGGGCCTTCACCTCTACCTGCACTTCCCCTCTCACACCAGCT
 481 GCACTCCCGTGGCTGCCAGAGCAGGGTGGTTTTCCCCAATACCTGGAGCTCAGAAAGGCAGAGCCATCTGGCCCTCCAGG
 561 GTGTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTCCACTCCCATTCTCCCTCCAAGAGG
 641 GGCCCAGCATTGTATTTCCCTGTGACCCCTTACTCTCCTGGCCAGAACTTGAGCCAGCTGTGGGATGTTGCTGCAGGACA
 721 GTAAGCCCTCACCTGGGCAAACATGAAGCTCTGGCCTCCTTTCCTCAGCCCCTTGTTCTTCCCTGTCCTCCACCCTGGAC
 801 CCCAGCCGGCTGCTGGAGCCCAGAGGCCACCTTCTCCCTGCATCCTGAATGATGCTTAGTCAGAAGCCTGTGTTGGAACA
 881 TCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGAGGACCTCAGCCACAGATGAGATCACACGCATGCACGTGCACACATG
 961 TACACACACACACCTACCTGCACAGCACGCTGTTGAGTGTTGGTTGCTAGAGTATCTGGCTGGCTGCTGTGTGCCTGGTT
1041 TCCTCACATCCTGCCTCAGCTTCACCACCCTGGCTTATGTGGAACACCTATCAGGGAGCAGAAAAGGGGTGCAGTACACT
1121 AAGTGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCATAGGACACCTGGTTTAGGTAG
1201 AAGGAGCCTCCTCAAAGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGAGGTGCTGGGGC
1281 CAAAGGAGACACTAGAAAAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAATGTAAAAGGGCAG
1361 TAATTAGGGGTGAGGGAAAGGAGATAGGGGACCCTAGGAGGTAGAGTGGGACCATGTCGTGAGGCAGTTGAAGAGTTGAG
1441 GAAAGGTTTTTCTGGGCCCTACTGCTCCCCTCTGCTGCAGGTAAGTCAGAGCAGCTTTACCACAGCTTCAGGCCACGAGA
1521 GCCCCTTCACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCTGGGCCAGGTGTGGTGGCTCAAGCC
1601 TGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACCTGAGGTTAGGAGTTCGAGATCAGCCTGGCCAACATGGT
1681 GAAACCCTGTCTACTAAAAATAAAAAAATTAGCTGGGCGTGGTGGTGGGCGCCTGTAATCCCAGCTACTCGGGAGGTTTA
1761 GGCAGGAGAATCGCTTGAACCCTGGAGGTGGAGGTGGAGGTTGCAGTGAGCCGAGATCGCGCCATTGCACTCCAACCTAG
1841 GTGACAAAGCTACACGCCATCTCAAAAAAAAAAAAGAAAAAGGGTTACAAAAGGTTCCCAGCTCCGGGGCATCAGCCTGA
1921 GTGCGCTTGAGCTGCTCCAAACCTGGCCCTTCCCCACTCCTCTAGCATCGCCACCCGCATGGCCCTGGAACTCCCGCGGC
2001 GGCGGGGGCGGGCCCGTGCCTGCTGTGCCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCC
2081 TCTGGGCCAGGTCCTTCACGAGGAGGGAGCTACCCTTCGCCAGAAGTTTGTGAGAATGTGGCCGCCCTTTTCCTGCCCTC
2161 TGCCCCATGTGGGTGGGGGGCCTCGTGGCCCGGCCGGCGCCCCGTCCCCTTCTGCATGTCTGAGGCCACCGGCAACCGCC
2241 GCCCCACTCCAGATTTGCCCCCGCCTTGTTTTGAAAGCCCCTTATTTATAACTTTTATACTTTGTGCAGGTCGCGGCGCT
2321 TCCTGCCTCATCCTCGGCTGCATGGGGCGGGGGCGCTGTTTTTAACGTGCCCGTTTGTACTGATGTATGAACTTGTCAAT
2401 AAACACAATTGTTTGTTAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' acCUGCAAAC-GUC--CCCUCCACc 5'
            |: |||||  ||  |||||||| 
Target 5' ctGGAGTTTGAGAGGAGGGAGGTGc 3'
1250 - 1274 162.00 -24.90
2
miRNA  3' accugcaaACGUCC-CCUCCACc 5'
                  || ||| ||||||| 
Target 5' ttgaacccTGGAGGTGGAGGTGg 3'
1775 - 1797 154.00 -23.20
3
miRNA  3' accugcaaACGUCCCCUCCAcc 5'
                  | |  |||||||  
Target 5' atcccagcTACTCGGGAGGTtt 3'
1738 - 1759 126.00 -11.90
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30699768 80 COSMIC
COSN31513121 109 COSMIC
COSN24313613 178 COSMIC
COSN31608786 259 COSMIC
COSN31602827 378 COSMIC
COSN1675979 489 COSMIC
COSN19660165 490 COSMIC
COSN1675982 528 COSMIC
COSN30345867 589 COSMIC
COSN31548444 807 COSMIC
COSN22291974 1289 COSMIC
COSN6641685 2001 COSMIC
COSN6641686 2078 COSMIC
COSN22266644 2373 COSMIC
rs4923914 1970 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1489522623 1 dbSNP
rs1387097208 4 dbSNP
rs892458141 11 dbSNP
rs951919714 18 dbSNP
rs779712896 19 dbSNP
rs1469332964 22 dbSNP
rs1249585040 24 dbSNP
rs1318394993 26 dbSNP
rs1472216368 33 dbSNP
rs751821100 39 dbSNP
rs73408963 40 dbSNP
rs1043770847 42 dbSNP
rs1383183085 43 dbSNP
rs569924148 51 dbSNP
rs961783125 52 dbSNP
rs1434063986 53 dbSNP
rs999953031 54 dbSNP
rs992815490 64 dbSNP
rs1187220205 69 dbSNP
rs1464094047 70 dbSNP
rs1431403040 78 dbSNP
rs894339268 80 dbSNP
rs1371426713 81 dbSNP
rs1342478972 82 dbSNP
rs759728624 84 dbSNP
rs1024323968 88 dbSNP
rs1233725687 92 dbSNP
rs1014166683 94 dbSNP
rs1369894471 96 dbSNP
rs748508441 116 dbSNP
rs529311784 118 dbSNP
rs549087154 124 dbSNP
rs1438272137 125 dbSNP
rs951063911 136 dbSNP
rs980358942 140 dbSNP
rs879182251 141 dbSNP
rs1319035427 147 dbSNP
rs770162372 148 dbSNP
rs3832985 149 dbSNP
rs570813387 149 dbSNP
rs3743028 150 dbSNP
rs912969908 160 dbSNP
rs1167316516 164 dbSNP
rs535001718 168 dbSNP
rs191259525 190 dbSNP
rs1194723691 196 dbSNP
rs944469017 199 dbSNP
rs372076087 204 dbSNP
rs1440140197 210 dbSNP
rs1200676044 218 dbSNP
rs962459006 219 dbSNP
rs1207773587 220 dbSNP
rs1272188718 221 dbSNP
rs1227630250 222 dbSNP
rs1342808658 236 dbSNP
rs986806681 237 dbSNP
rs1275752194 238 dbSNP
rs570679636 241 dbSNP
rs911183644 242 dbSNP
rs900176870 248 dbSNP
rs942816636 249 dbSNP
rs748929100 254 dbSNP
rs1377692003 255 dbSNP
rs1048957660 257 dbSNP
rs1306597855 261 dbSNP
rs1248078337 262 dbSNP
rs1429459542 275 dbSNP
rs1420867076 276 dbSNP
rs370196318 282 dbSNP
rs3743027 284 dbSNP
rs745499023 291 dbSNP
rs1393207744 292 dbSNP
rs1188279493 297 dbSNP
rs771718249 303 dbSNP
rs897208927 312 dbSNP
rs373487464 313 dbSNP
rs1204188004 314 dbSNP
rs548560957 321 dbSNP
rs1389379181 332 dbSNP
rs1207972789 333 dbSNP
rs1354391136 336 dbSNP
rs938094460 342 dbSNP
rs1233922724 350 dbSNP
rs1055654104 353 dbSNP
rs1286612306 361 dbSNP
rs1409613621 362 dbSNP
rs894297932 373 dbSNP
rs570067979 374 dbSNP
rs185978107 375 dbSNP
rs1351767196 378 dbSNP
rs555428200 383 dbSNP
rs1325250597 386 dbSNP
rs980138832 388 dbSNP
rs572089120 396 dbSNP
rs1409332805 403 dbSNP
rs1470429832 411 dbSNP
rs565985380 411 dbSNP
rs1298957992 412 dbSNP
rs1219345809 413 dbSNP
rs1450988149 414 dbSNP
rs1290455682 415 dbSNP
rs563927596 417 dbSNP
rs1003846321 423 dbSNP
rs544992265 424 dbSNP
rs1266533403 426 dbSNP
rs533404678 427 dbSNP
rs543720794 428 dbSNP
rs944418535 432 dbSNP
rs1331061070 439 dbSNP
rs1327100593 444 dbSNP
rs975809917 446 dbSNP
rs1250554434 448 dbSNP
rs1385805095 449 dbSNP
rs1465835969 449 dbSNP
rs1061010 457 dbSNP
rs1389477639 460 dbSNP
rs1400908733 462 dbSNP
rs1409645282 465 dbSNP
rs563510829 466 dbSNP
rs996599892 467 dbSNP
rs921717285 474 dbSNP
rs529424961 476 dbSNP
rs1469929401 477 dbSNP
rs1049228005 483 dbSNP
rs1188912429 489 dbSNP
rs3179542 490 dbSNP
rs376654720 499 dbSNP
rs925279583 502 dbSNP
rs938043748 514 dbSNP
rs566162260 518 dbSNP
rs1304898213 519 dbSNP
rs1055198742 523 dbSNP
rs1362465879 524 dbSNP
rs1319331758 525 dbSNP
rs1430771177 535 dbSNP
rs1346602498 539 dbSNP
rs1173447800 540 dbSNP
rs1395451746 545 dbSNP
rs1314920340 551 dbSNP
rs1036174617 552 dbSNP
rs1389423793 553 dbSNP
rs1186033482 560 dbSNP
rs1486194813 567 dbSNP
rs1244117451 578 dbSNP
rs918015678 585 dbSNP
rs1321881971 588 dbSNP
rs896317161 593 dbSNP
rs1236891958 599 dbSNP
rs114877930 602 dbSNP
rs1214660413 608 dbSNP
rs761582506 609 dbSNP
rs191088304 610 dbSNP
rs905971205 617 dbSNP
rs1446790113 621 dbSNP
rs1375888400 628 dbSNP
rs1001524097 630 dbSNP
rs1033442180 635 dbSNP
rs1427533245 640 dbSNP
rs369032981 650 dbSNP
rs1171048630 653 dbSNP
rs1004127884 656 dbSNP
rs373052686 658 dbSNP
rs1010905277 659 dbSNP
rs1020415379 660 dbSNP
rs1180391379 662 dbSNP
rs572074720 666 dbSNP
rs1330684273 667 dbSNP
rs898149681 673 dbSNP
rs1251299585 680 dbSNP
rs765004887 686 dbSNP
rs1205828440 690 dbSNP
rs183311332 696 dbSNP
rs1309928989 706 dbSNP
rs996940388 711 dbSNP
rs1355728294 717 dbSNP
rs1294671301 726 dbSNP
rs78921549 733 dbSNP
rs976259631 741 dbSNP
rs1369717009 755 dbSNP
rs921667091 756 dbSNP
rs1463445164 763 dbSNP
rs1445164788 768 dbSNP
rs955308787 770 dbSNP
rs953160475 776 dbSNP
rs35788516 781 dbSNP
rs984444850 788 dbSNP
rs908889604 792 dbSNP
rs1190315675 797 dbSNP
rs979642925 805 dbSNP
rs940585370 807 dbSNP
rs556477452 808 dbSNP
rs959380036 809 dbSNP
rs917880963 819 dbSNP
rs1264160322 822 dbSNP
rs1415945102 831 dbSNP
rs917972375 834 dbSNP
rs1334854309 835 dbSNP
rs1274739340 838 dbSNP
rs949182789 841 dbSNP
rs1159924861 845 dbSNP
rs1307473518 851 dbSNP
rs1392878477 860 dbSNP
rs1044949007 863 dbSNP
rs1047845519 869 dbSNP
rs905920313 876 dbSNP
rs1325073582 882 dbSNP
rs375845194 887 dbSNP
rs908366389 888 dbSNP
rs1384897929 889 dbSNP
rs750657652 893 dbSNP
rs143253775 894 dbSNP
rs898432928 896 dbSNP
rs1010269751 898 dbSNP
rs1421180974 902 dbSNP
rs758549365 903 dbSNP
rs932305822 911 dbSNP
rs1049864245 912 dbSNP
rs1291064063 916 dbSNP
rs1351889996 917 dbSNP
rs1254314456 919 dbSNP
rs535638046 926 dbSNP
rs1349547987 931 dbSNP
rs1260882675 933 dbSNP
rs1020951480 937 dbSNP
rs555316958 939 dbSNP
rs966288761 942 dbSNP
rs1441506374 943 dbSNP
rs997625918 944 dbSNP
rs1259592147 947 dbSNP
rs1328030326 948 dbSNP
rs1020690526 950 dbSNP
rs572058193 951 dbSNP
rs1376255381 952 dbSNP
rs1173619698 954 dbSNP
rs3743025 955 dbSNP
rs984949992 956 dbSNP
rs186893176 958 dbSNP
rs531648249 958 dbSNP
rs1025390625 962 dbSNP
rs1206523720 962 dbSNP
rs201006753 962 dbSNP
rs557699398 963 dbSNP
rs962013029 969 dbSNP
rs1295224389 972 dbSNP
rs971781397 974 dbSNP
rs917828624 984 dbSNP
rs577239720 988 dbSNP
rs949297469 989 dbSNP
rs970786010 990 dbSNP
rs983520009 995 dbSNP
rs543042014 1000 dbSNP
rs1435658439 1004 dbSNP
rs1197687 1018 dbSNP
rs926448723 1019 dbSNP
rs61046109 1020 dbSNP
rs1194941662 1025 dbSNP
rs1054937626 1030 dbSNP
rs1434504559 1034 dbSNP
rs1211333320 1051 dbSNP
rs543160631 1052 dbSNP
rs1311392092 1067 dbSNP
rs893258795 1074 dbSNP
rs1010633738 1076 dbSNP
rs932559151 1085 dbSNP
rs1229655885 1086 dbSNP
rs1305828876 1088 dbSNP
rs1049701079 1091 dbSNP
rs1292841877 1093 dbSNP
rs1041728397 1095 dbSNP
rs1333542835 1099 dbSNP
rs1357755176 1103 dbSNP
rs1327483436 1105 dbSNP
rs781588609 1115 dbSNP
rs1275370899 1118 dbSNP
rs1346983872 1125 dbSNP
rs1208491845 1128 dbSNP
rs748681131 1129 dbSNP
rs559707433 1134 dbSNP
rs1459353623 1144 dbSNP
rs756601883 1146 dbSNP
rs997741598 1147 dbSNP
rs542448974 1149 dbSNP
rs1188201844 1155 dbSNP
rs943744108 1164 dbSNP
rs778222688 1165 dbSNP
rs8039561 1169 dbSNP
rs1180768322 1172 dbSNP
rs1006428969 1175 dbSNP
rs1274952074 1176 dbSNP
rs1197647099 1177 dbSNP
rs902287201 1181 dbSNP
rs1000956142 1184 dbSNP
rs1250064377 1188 dbSNP
rs1272859188 1190 dbSNP
rs534884659 1193 dbSNP
rs1201019201 1198 dbSNP
rs1357813696 1204 dbSNP
rs1278166983 1207 dbSNP
rs1441881081 1211 dbSNP
rs961850403 1212 dbSNP
rs551607956 1216 dbSNP
rs565408238 1221 dbSNP
rs1396235981 1236 dbSNP
rs774291934 1236 dbSNP
rs530908690 1237 dbSNP
rs1462714332 1238 dbSNP
rs1012903368 1241 dbSNP
rs980694465 1250 dbSNP
rs1025252529 1253 dbSNP
rs1454189246 1255 dbSNP
rs1234590994 1259 dbSNP
rs926558230 1266 dbSNP
rs936496807 1274 dbSNP
rs192291700 1276 dbSNP
rs1214345271 1288 dbSNP
rs1014987594 1293 dbSNP
rs1361246187 1295 dbSNP
rs1223591856 1298 dbSNP
rs1351830995 1298 dbSNP
rs914627339 1302 dbSNP
rs1430796208 1307 dbSNP
rs946164987 1317 dbSNP
rs929788431 1318 dbSNP
rs114118341 1321 dbSNP
rs535755140 1329 dbSNP
rs973524299 1334 dbSNP
rs1326037840 1337 dbSNP
rs761050839 1337 dbSNP
rs3743024 1338 dbSNP
rs1343089342 1341 dbSNP
rs1317183714 1342 dbSNP
rs933540223 1344 dbSNP
rs1323586104 1350 dbSNP
rs1171743644 1363 dbSNP
rs148302365 1364 dbSNP
rs1395568139 1365 dbSNP
rs1194341760 1371 dbSNP
rs889399583 1380 dbSNP
rs1006788838 1382 dbSNP
rs760907476 1385 dbSNP
rs1215322463 1387 dbSNP
rs1447975066 1387 dbSNP
rs1232040180 1393 dbSNP
rs1299704730 1394 dbSNP
rs1342680918 1395 dbSNP
rs1016447251 1408 dbSNP
rs1347799124 1412 dbSNP
rs775263343 1419 dbSNP
rs943679969 1420 dbSNP
rs1359250486 1422 dbSNP
rs1269271903 1430 dbSNP
rs1337642105 1433 dbSNP
rs1211746908 1435 dbSNP
rs1310874904 1440 dbSNP
rs534688368 1441 dbSNP
rs557547954 1445 dbSNP
rs183437932 1446 dbSNP
rs1175424025 1452 dbSNP
rs140693998 1453 dbSNP
rs1192371886 1454 dbSNP
rs936419626 1458 dbSNP
rs1053499085 1459 dbSNP
rs1485544760 1462 dbSNP
rs970371372 1463 dbSNP
rs1212821686 1465 dbSNP
rs776846727 1466 dbSNP
rs1305308165 1469 dbSNP
rs980470342 1470 dbSNP
rs1271708865 1473 dbSNP
rs188028567 1479 dbSNP
rs1429482927 1482 dbSNP
rs1341994552 1488 dbSNP
rs958007490 1489 dbSNP
rs1047062401 1496 dbSNP
rs573955041 1499 dbSNP
rs906797962 1502 dbSNP
rs1004852216 1504 dbSNP
rs989688879 1507 dbSNP
rs913752042 1510 dbSNP
rs1170112188 1517 dbSNP
rs746544019 1518 dbSNP
rs772901186 1522 dbSNP
rs568651982 1523 dbSNP
rs1459082812 1524 dbSNP
rs963407341 1529 dbSNP
rs1258628772 1532 dbSNP
rs923396645 1533 dbSNP
rs1029102717 1534 dbSNP
rs1438060177 1536 dbSNP
rs953991980 1536 dbSNP
rs1270955952 1537 dbSNP
rs1232265445 1540 dbSNP
rs542965748 1543 dbSNP
rs912437557 1544 dbSNP
rs376714934 1546 dbSNP
rs965269878 1548 dbSNP
rs933304542 1551 dbSNP
rs1050413968 1552 dbSNP
rs1461142884 1554 dbSNP
rs1365766348 1556 dbSNP
rs1216276655 1557 dbSNP
rs1167359744 1561 dbSNP
rs889337123 1570 dbSNP
rs1293128566 1573 dbSNP
rs923597832 1576 dbSNP
rs1178275070 1585 dbSNP
rs936368621 1586 dbSNP
rs145896760 1589 dbSNP
rs1038233529 1590 dbSNP
rs897999885 1593 dbSNP
rs573333306 1604 dbSNP
rs948189441 1605 dbSNP
rs545615982 1611 dbSNP
rs1236692863 1612 dbSNP
rs1316118795 1618 dbSNP
rs993697596 1627 dbSNP
rs565367130 1631 dbSNP
rs1368636930 1632 dbSNP
rs1324007886 1633 dbSNP
rs896417431 1635 dbSNP
rs1211829590 1637 dbSNP
rs1270595395 1642 dbSNP
rs1013430347 1649 dbSNP
rs1295490376 1653 dbSNP
rs1452169022 1658 dbSNP
rs1486453720 1659 dbSNP
rs906307485 1661 dbSNP
rs531070974 1664 dbSNP
rs192825475 1665 dbSNP
rs1393762736 1668 dbSNP
rs1192468465 1675 dbSNP
rs958171885 1677 dbSNP
rs1269109532 1679 dbSNP
rs1010827279 1682 dbSNP
rs1021173901 1687 dbSNP
rs34551245 1690 dbSNP
rs397694223 1690 dbSNP
rs10634609 1691 dbSNP
rs386382833 1692 dbSNP
rs869264021 1694 dbSNP
rs1005130274 1695 dbSNP
rs1233734713 1697 dbSNP
rs1331749984 1700 dbSNP
rs1303729805 1702 dbSNP
rs12916566 1704 dbSNP
rs1380721789 1710 dbSNP
rs1036644889 1711 dbSNP
rs1160675984 1713 dbSNP
rs899146946 1715 dbSNP
rs994859262 1719 dbSNP
rs1453014129 1720 dbSNP
rs1173561148 1730 dbSNP
rs574917612 1731 dbSNP
rs1023277646 1732 dbSNP
rs138094842 1738 dbSNP
rs67234136 1738 dbSNP
rs1427589468 1741 dbSNP
rs953498710 1751 dbSNP
rs1294136712 1752 dbSNP
rs1484558627 1754 dbSNP
rs1354999567 1768 dbSNP
rs1007098118 1773 dbSNP
rs1231559144 1783 dbSNP
rs1345865595 1783 dbSNP
rs796877844 1783 dbSNP
rs1225278014 1784 dbSNP
rs1326076386 1788 dbSNP
rs1279007066 1791 dbSNP
rs1019444202 1794 dbSNP
rs561279231 1796 dbSNP
rs1312861742 1800 dbSNP
rs529154314 1801 dbSNP
rs1415574532 1806 dbSNP
rs977963880 1808 dbSNP
rs1460994786 1809 dbSNP
rs1423971027 1813 dbSNP
rs1172367118 1816 dbSNP
rs545460758 1817 dbSNP
rs957676753 1819 dbSNP
rs565994685 1821 dbSNP
rs1259475341 1822 dbSNP
rs534503881 1826 dbSNP
rs1188331516 1830 dbSNP
rs1444091253 1831 dbSNP
rs1248241315 1832 dbSNP
rs989173146 1833 dbSNP
rs1338809004 1837 dbSNP
rs1258994070 1842 dbSNP
rs551203327 1843 dbSNP
rs1220674992 1846 dbSNP
rs1332896034 1848 dbSNP
rs1293095105 1850 dbSNP
rs916281486 1855 dbSNP
rs1342796901 1856 dbSNP
rs1256394867 1857 dbSNP
rs947831896 1859 dbSNP
rs1390382537 1860 dbSNP
rs1400352014 1862 dbSNP
rs1172433619 1863 dbSNP
rs1183855109 1863 dbSNP
rs11449239 1864 dbSNP
rs1238893086 1864 dbSNP
rs1362048085 1864 dbSNP
rs1457410829 1864 dbSNP
rs1479458263 1864 dbSNP
rs554317417 1864 dbSNP
rs982303552 1864 dbSNP
rs1200562250 1867 dbSNP
rs1408136962 1871 dbSNP
rs928105296 1873 dbSNP
rs1156915288 1874 dbSNP
rs966562198 1877 dbSNP
rs940863437 1878 dbSNP
rs1360754803 1880 dbSNP
rs976578590 1888 dbSNP
rs899430958 1890 dbSNP
rs1278333553 1893 dbSNP
rs904840360 1894 dbSNP
rs923344207 1906 dbSNP
rs1437996240 1907 dbSNP
rs1050454023 1908 dbSNP
rs954804583 1911 dbSNP
rs1281469884 1914 dbSNP
rs571006723 1916 dbSNP
rs1406941385 1917 dbSNP
rs1382484727 1919 dbSNP
rs1374221189 1926 dbSNP
rs1008973152 1933 dbSNP
rs1019473566 1941 dbSNP
rs536759293 1944 dbSNP
rs1452648681 1946 dbSNP
rs1314405522 1947 dbSNP
rs999331854 1950 dbSNP
rs1030846494 1956 dbSNP
rs1282619413 1957 dbSNP
rs4924576 1960 dbSNP
rs374589624 1961 dbSNP
rs1023297820 1963 dbSNP
rs1275126448 1964 dbSNP
rs1484881945 1969 dbSNP
rs4923914 1970 dbSNP
rs370647627 1972 dbSNP
rs4923915 1973 dbSNP
rs1362447519 1976 dbSNP
rs1046631704 1978 dbSNP
rs1432986835 1979 dbSNP
rs1480026412 1980 dbSNP
rs1479144801 1983 dbSNP
rs1174908882 1986 dbSNP
rs1427213676 1987 dbSNP
rs1454632778 1990 dbSNP
rs1488813645 1993 dbSNP
rs1172906649 1994 dbSNP
rs1393096528 1996 dbSNP
rs1278751355 1998 dbSNP
rs561927170 2001 dbSNP
rs1331208324 2002 dbSNP
rs1355268639 2003 dbSNP
rs1269219275 2004 dbSNP
rs1441582561 2009 dbSNP
rs1296483027 2012 dbSNP
rs940810973 2014 dbSNP
rs1311041714 2015 dbSNP
rs1001973957 2016 dbSNP
rs1055159856 2017 dbSNP
rs545266155 2019 dbSNP
rs1417708321 2021 dbSNP
rs920809549 2024 dbSNP
rs1265826290 2029 dbSNP
rs1186209405 2031 dbSNP
rs1346245889 2033 dbSNP
rs1238497366 2042 dbSNP
rs1010411904 2043 dbSNP
rs750890940 2044 dbSNP
rs1020852097 2047 dbSNP
rs1319496385 2047 dbSNP
rs966626671 2049 dbSNP
rs1232379301 2050 dbSNP
rs1379817479 2051 dbSNP
rs1304500322 2052 dbSNP
rs997945935 2062 dbSNP
rs1029469234 2063 dbSNP
rs1468523543 2077 dbSNP
rs2277535 2078 dbSNP
rs986238830 2079 dbSNP
rs374262013 2080 dbSNP
rs1425968747 2081 dbSNP
rs1163243261 2095 dbSNP
rs963405385 2101 dbSNP
rs114261007 2107 dbSNP
rs919506104 2111 dbSNP
rs544736576 2112 dbSNP
rs561240445 2115 dbSNP
rs1198676009 2116 dbSNP
rs1409649198 2120 dbSNP
rs1168572214 2125 dbSNP
rs893668862 2129 dbSNP
rs1396852345 2130 dbSNP
rs1322096935 2131 dbSNP
rs929559613 2138 dbSNP
rs1314816427 2146 dbSNP
rs530022065 2147 dbSNP
rs540658260 2148 dbSNP
rs1376012008 2154 dbSNP
rs1308633206 2155 dbSNP
rs1325826068 2158 dbSNP
rs1010810871 2159 dbSNP
rs1046579191 2160 dbSNP
rs1433349678 2164 dbSNP
rs559378076 2167 dbSNP
rs1271100558 2168 dbSNP
rs1361664122 2169 dbSNP
rs1417882777 2173 dbSNP
rs1212496328 2174 dbSNP
rs1023997825 2175 dbSNP
rs1178725138 2177 dbSNP
rs928121470 2179 dbSNP
rs1334994184 2180 dbSNP
rs1250822912 2182 dbSNP
rs937710361 2183 dbSNP
rs1054874205 2185 dbSNP
rs893586745 2188 dbSNP
rs1271213395 2199 dbSNP
rs1466160828 2201 dbSNP
rs2277534 2204 dbSNP
rs1042460721 2205 dbSNP
rs1241353860 2213 dbSNP
rs1352917864 2218 dbSNP
rs1379172371 2221 dbSNP
rs551120960 2221 dbSNP
rs1474295710 2222 dbSNP
rs1185066569 2226 dbSNP
rs1386448398 2227 dbSNP
rs902414604 2228 dbSNP
rs998060529 2231 dbSNP
rs1029415532 2233 dbSNP
rs1420204897 2235 dbSNP
rs1462041035 2236 dbSNP
rs147391033 2236 dbSNP
rs955620695 2238 dbSNP
rs1421031778 2239 dbSNP
rs889606985 2241 dbSNP
rs1007173191 2242 dbSNP
rs1433417704 2243 dbSNP
rs961795013 2252 dbSNP
rs571125020 2256 dbSNP
rs1184623197 2260 dbSNP
rs1487838095 2262 dbSNP
rs1402995510 2263 dbSNP
rs920755286 2264 dbSNP
rs1043627 2267 dbSNP
rs973402266 2274 dbSNP
rs1232533734 2278 dbSNP
rs1313008178 2279 dbSNP
rs1026338770 2281 dbSNP
rs1340260830 2282 dbSNP
rs1299394958 2284 dbSNP
rs910812201 2289 dbSNP
rs1400639821 2293 dbSNP
rs950907372 2294 dbSNP
rs1297918532 2296 dbSNP
rs1355634563 2297 dbSNP
rs1379076780 2299 dbSNP
rs1167842677 2300 dbSNP
rs1477403426 2301 dbSNP
rs1263664401 2308 dbSNP
rs1195528180 2311 dbSNP
rs982369097 2313 dbSNP
rs944694183 2315 dbSNP
rs550237764 2316 dbSNP
rs924658383 2318 dbSNP
rs1258027329 2319 dbSNP
rs938158498 2320 dbSNP
rs1217006735 2321 dbSNP
rs567387381 2324 dbSNP
rs1317467423 2327 dbSNP
rs557877605 2329 dbSNP
rs1359509395 2330 dbSNP
rs1339287608 2331 dbSNP
rs934742296 2333 dbSNP
rs1283469968 2334 dbSNP
rs1328633048 2337 dbSNP
rs1054503165 2339 dbSNP
rs535859973 2340 dbSNP
rs1011175561 2341 dbSNP
rs1471679229 2343 dbSNP
rs1367885108 2344 dbSNP
rs1445067709 2347 dbSNP
rs1044961083 2349 dbSNP
rs1211902199 2349 dbSNP
rs991424885 2355 dbSNP
rs1457487270 2357 dbSNP
rs1259897137 2359 dbSNP
rs552977479 2361 dbSNP
rs905118515 2364 dbSNP
rs914968109 2365 dbSNP
rs1415841120 2370 dbSNP
rs567004294 2371 dbSNP
rs539352804 2373 dbSNP
rs1042016150 2381 dbSNP
rs1306464817 2383 dbSNP
rs902193671 2387 dbSNP
rs1384793266 2391 dbSNP
rs1400647020 2395 dbSNP
rs933689864 2396 dbSNP
rs1332942153 2400 dbSNP
rs1403433544 2409 dbSNP
rs778574795 2410 dbSNP
rs993236121 2420 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084065. RNA binding protein: AGO2. Condition:CLIP_emetine_AbnovaAb HITS-CLIP data was present in GSM1084076. RNA binding protein: AGO2. Condition:CLIP_nohippuristanol_rep1_SigmaAb HITS-CLIP data was present in GSM1084079. RNA binding protein: AGO2. Condition:CLIP_hippuristanol_rep2_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084065
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_emetine_AbnovaAb
Location of target site ENST00000457542.2 | 3UTR | AGGUGGAGGUGGAGGUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1084076
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_nohippuristanol_rep1_SigmaAb
Location of target site ENST00000457542.2 | 3UTR | UGGAGGUGGAGGUGGAGGU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM1084079
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_hippuristanol_rep2_AbnovaAb
Location of target site ENST00000457542.2 | 3UTR | UGGAGGUGGAGGUGGAGGUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
184 hsa-miR-1306-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT089458 TET3 tet methylcytosine dioxygenase 3 2 2
MIRT167143 LHFPL2 LHFPL tetraspan subfamily member 2 2 2
MIRT290873 BCL10 B-cell CLL/lymphoma 10 2 2
MIRT320237 CYCS cytochrome c, somatic 2 2
MIRT462980 ZNF784 zinc finger protein 784 2 2
MIRT478039 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT479102 CNNM4 cyclin and CBS domain divalent metal cation transport mediator 4 2 4
MIRT482763 TMEM126B transmembrane protein 126B 2 2
MIRT489972 MCC mutated in colorectal cancers 2 4
MIRT495484 TNFAIP2 TNF alpha induced protein 2 2 2
MIRT496148 GPS1 G protein pathway suppressor 1 2 2
MIRT523370 GSR glutathione-disulfide reductase 2 2
MIRT526299 SORCS2 sortilin related VPS10 domain containing receptor 2 2 4
MIRT527427 NRL neural retina leucine zipper 2 2
MIRT527860 SMOC1 SPARC related modular calcium binding 1 2 6
MIRT529685 FBXL19 F-box and leucine rich repeat protein 19 2 2
MIRT531526 NOM1 nucleolar protein with MIF4G domain 1 2 2
MIRT532461 PLGRKT plasminogen receptor with a C-terminal lysine 2 2
MIRT532519 KCNN1 potassium calcium-activated channel subfamily N member 1 2 2
MIRT532668 APOBEC3D apolipoprotein B mRNA editing enzyme catalytic subunit 3D 2 2
MIRT532718 SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 2 2
MIRT533205 WAPAL WAPL cohesin release factor 2 2
MIRT536480 KIAA1549 KIAA1549 2 2
MIRT537158 GID8 GID complex subunit 8 homolog 2 2
MIRT539307 AKIRIN1 akirin 1 2 2
MIRT539569 CNKSR3 CNKSR family member 3 2 4
MIRT540045 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 4
MIRT540235 SAMD5 sterile alpha motif domain containing 5 2 2
MIRT543016 CRK CRK proto-oncogene, adaptor protein 2 2
MIRT551436 F2 coagulation factor II, thrombin 2 2
MIRT556146 MED12L mediator complex subunit 12 like 2 2
MIRT570714 DGKE diacylglycerol kinase epsilon 2 2
MIRT572037 GRWD1 glutamate rich WD repeat containing 1 2 2
MIRT572409 MRPS14 mitochondrial ribosomal protein S14 2 2
MIRT572660 AGMAT agmatinase 2 4
MIRT611450 NRIP3 nuclear receptor interacting protein 3 2 2
MIRT611601 JAKMIP3 Janus kinase and microtubule interacting protein 3 2 4
MIRT612208 TMEM109 transmembrane protein 109 2 2
MIRT612312 VSIG10 V-set and immunoglobulin domain containing 10 2 2
MIRT614146 MAFK MAF bZIP transcription factor K 2 2
MIRT617371 C21orf62 chromosome 21 open reading frame 62 2 2
MIRT617689 MAPKBP1 mitogen-activated protein kinase binding protein 1 2 2
MIRT618495 DENND5B DENN domain containing 5B 2 4
MIRT618802 SPATA21 spermatogenesis associated 21 2 2
MIRT619061 TTC4 tetratricopeptide repeat domain 4 2 2
MIRT619902 NPTXR neuronal pentraxin receptor 2 2
MIRT620080 DZIP1L DAZ interacting zinc finger protein 1 like 2 2
MIRT622233 SLC25A45 solute carrier family 25 member 45 2 2
MIRT625262 ZNF566 zinc finger protein 566 2 2
MIRT625725 CXorf38 chromosome X open reading frame 38 2 2
MIRT625813 POFUT1 protein O-fucosyltransferase 1 2 2
MIRT625839 NXPE2 neurexophilin and PC-esterase domain family member 2 2 2
MIRT626024 XRCC2 X-ray repair cross complementing 2 2 2
MIRT626054 PDE4C phosphodiesterase 4C 2 2
MIRT626082 CWF19L1 CWF19 like 1, cell cycle control (S. pombe) 2 2
MIRT626356 PACS1 phosphofurin acidic cluster sorting protein 1 2 2
MIRT626790 KCNK6 potassium two pore domain channel subfamily K member 6 2 2
MIRT627797 RAB11FIP1 RAB11 family interacting protein 1 2 2
MIRT628234 FAM212B family with sequence similarity 212 member B 2 2
MIRT628241 FADS1 fatty acid desaturase 1 2 2
MIRT628249 ETF1 eukaryotic translation termination factor 1 2 2
MIRT628799 A2ML1 alpha-2-macroglobulin like 1 2 2
MIRT628879 FAM177A1 family with sequence similarity 177 member A1 2 4
MIRT629333 ZNF487P zinc finger protein 487 1 1
MIRT629435 RPL34 ribosomal protein L34 2 2
MIRT629977 MRPL36 mitochondrial ribosomal protein L36 2 2
MIRT630727 FPR1 formyl peptide receptor 1 2 2
MIRT630776 MSANTD3 Myb/SANT DNA binding domain containing 3 2 2
MIRT631074 ZNF829 zinc finger protein 829 2 2
MIRT633139 C6orf132 chromosome 6 open reading frame 132 2 2
MIRT633178 AGO3 argonaute 3, RISC catalytic component 2 2
MIRT633510 RNF14 ring finger protein 14 2 2
MIRT633613 APCDD1 APC down-regulated 1 2 2
MIRT633668 MYO1F myosin IF 2 2
MIRT633707 LRRC8B leucine rich repeat containing 8 VRAC subunit B 2 2
MIRT633798 SOX7 SRY-box 7 2 2
MIRT634203 TMOD2 tropomodulin 2 2 4
MIRT634297 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT634509 NYAP2 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 2 2
MIRT634518 NKAP NFKB activating protein 2 2
MIRT634754 CRCP CGRP receptor component 2 2
MIRT635741 IFNAR1 interferon alpha and beta receptor subunit 1 2 2
MIRT636480 KLHL7 kelch like family member 7 2 2
MIRT637042 FITM2 fat storage inducing transmembrane protein 2 2 2
MIRT637748 POLR3K RNA polymerase III subunit K 2 2
MIRT638568 IFNE interferon epsilon 2 2
MIRT639155 TMEM167A transmembrane protein 167A 2 2
MIRT639848 ZBTB20 zinc finger and BTB domain containing 20 2 2
MIRT641770 ZNF207 zinc finger protein 207 2 2
MIRT642285 ZNF99 zinc finger protein 99 2 2
MIRT642685 KRT74 keratin 74 2 2
MIRT643530 ERAP2 endoplasmic reticulum aminopeptidase 2 2 2
MIRT643742 ZNF284 zinc finger protein 284 2 4
MIRT643945 WIPF3 WAS/WASL interacting protein family member 3 2 2
MIRT644320 NFKBID NFKB inhibitor delta 2 2
MIRT644383 ZNF286A zinc finger protein 286A 2 2
MIRT645130 HES2 hes family bHLH transcription factor 2 2 2
MIRT645607 PCDH11X protocadherin 11 X-linked 2 2
MIRT647121 ZNF446 zinc finger protein 446 2 2
MIRT648484 CMBL carboxymethylenebutenolidase homolog 2 2
MIRT648549 BBS5 Bardet-Biedl syndrome 5 2 2
MIRT649252 TRIM65 tripartite motif containing 65 2 2
MIRT649468 SLC10A7 solute carrier family 10 member 7 2 2
MIRT650013 KLB klotho beta 2 2
MIRT650068 CCDC134 coiled-coil domain containing 134 2 2
MIRT650325 RTN2 reticulon 2 2 2
MIRT651093 ZNF516 zinc finger protein 516 2 2
MIRT651265 ZKSCAN4 zinc finger with KRAB and SCAN domains 4 2 2
MIRT651272 ZKSCAN1 zinc finger with KRAB and SCAN domains 1 2 2
MIRT651402 ZBTB16 zinc finger and BTB domain containing 16 2 2
MIRT652163 TRIM66 tripartite motif containing 66 2 2
MIRT653153 SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 2 2
MIRT653477 SLC4A1 solute carrier family 4 member 1 (Diego blood group) 2 2
MIRT653922 SERPINC1 serpin family C member 1 2 2
MIRT654243 RNF115 ring finger protein 115 2 2
MIRT655354 PCDH11Y protocadherin 11 Y-linked 2 2
MIRT655958 NDST1 N-deacetylase and N-sulfotransferase 1 2 2
MIRT656318 MESDC1 talin rod domain containing 1 2 2
MIRT656578 LSM10 LSM10, U7 small nuclear RNA associated 2 2
MIRT657210 IKZF2 IKAROS family zinc finger 2 2 2
MIRT657856 GJB1 gap junction protein beta 1 2 2
MIRT658207 FBXO44 F-box protein 44 2 2
MIRT659003 DIAPH1 diaphanous related formin 1 2 2
MIRT659349 CSRP1 cysteine and glycine rich protein 1 2 2
MIRT659501 CISD3 CDGSH iron sulfur domain 3 2 2
MIRT659761 CCDC171 coiled-coil domain containing 171 2 2
MIRT660149 BRD4 bromodomain containing 4 2 2
MIRT661582 EPHX2 epoxide hydrolase 2 2 2
MIRT661753 ATM ATM serine/threonine kinase 2 2
MIRT662223 CCRL2 C-C motif chemokine receptor like 2 2 2
MIRT663883 CXorf56 chromosome X open reading frame 56 2 2
MIRT664308 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT664649 GALM galactose mutarotase 2 2
MIRT664671 L2HGDH L-2-hydroxyglutarate dehydrogenase 2 2
MIRT665050 C3 complement C3 2 2
MIRT666467 SCRG1 stimulator of chondrogenesis 1 2 2
MIRT666529 RNF170 ring finger protein 170 2 2
MIRT669118 CDC42BPG CDC42 binding protein kinase gamma 2 2
MIRT669311 C17orf75 chromosome 17 open reading frame 75 2 2
MIRT669358 BHLHE22 basic helix-loop-helix family member e22 2 2
MIRT669691 ABLIM1 actin binding LIM protein 1 2 2
MIRT674223 FAM120AOS family with sequence similarity 120A opposite strand 2 2
MIRT674766 QRSL1 glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 2 2
MIRT675207 ZNF554 zinc finger protein 554 2 2
MIRT675271 ZNF431 zinc finger protein 431 2 2
MIRT676265 PBOV1 prostate and breast cancer overexpressed 1 2 2
MIRT676573 VSIG1 V-set and immunoglobulin domain containing 1 2 2
MIRT677566 C19orf52 translocase of inner mitochondrial membrane 29 2 2
MIRT677631 ALG1 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase 2 2
MIRT678115 MICA MHC class I polypeptide-related sequence A 2 2
MIRT678694 RNF157 ring finger protein 157 2 2
MIRT679583 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT679621 MED28 mediator complex subunit 28 2 2
MIRT683700 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT683721 LACTB lactamase beta 2 2
MIRT690967 APOL1 apolipoprotein L1 2 2
MIRT691611 IPP intracisternal A particle-promoted polypeptide 2 2
MIRT702524 KCND3 potassium voltage-gated channel subfamily D member 3 2 2
MIRT704762 CDKN2AIPNL CDKN2A interacting protein N-terminal like 2 2
MIRT708738 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT708898 SKIDA1 SKI/DACH domain containing 1 2 2
MIRT709965 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT710373 GM2A GM2 ganglioside activator 2 2
MIRT710533 TMEM201 transmembrane protein 201 2 2
MIRT710582 HLCS holocarboxylase synthetase 2 2
MIRT711030 MBOAT2 membrane bound O-acyltransferase domain containing 2 2 2
MIRT712200 SHROOM4 shroom family member 4 2 2
MIRT713798 CPLX2 complexin 2 2 2
MIRT714096 ZNF486 zinc finger protein 486 2 2
MIRT714923 PPP1R12C protein phosphatase 1 regulatory subunit 12C 2 2
MIRT716518 TNPO2 transportin 2 2 2
MIRT716701 HLA-B major histocompatibility complex, class I, B 2 2
MIRT717070 MTMR6 myotubularin related protein 6 2 2
MIRT719561 CBL Cbl proto-oncogene 2 2
MIRT719688 ALDH1L2 aldehyde dehydrogenase 1 family member L2 2 2
MIRT720134 RIMKLA ribosomal modification protein rimK like family member A 2 2
MIRT720222 IPPK inositol-pentakisphosphate 2-kinase 2 2
MIRT720982 METTL21A methyltransferase like 21A 2 2
MIRT723821 PDS5A PDS5 cohesin associated factor A 2 2
MIRT723999 LMTK2 lemur tyrosine kinase 2 2 2
MIRT724963 PTK6 protein tyrosine kinase 6 2 2
MIRT725217 PEA15 phosphoprotein enriched in astrocytes 15 2 2
MIRT725262 PARVB parvin beta 2 2
MIRT755883 METTL14 methyltransferase like 14 3 1
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-1306 Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)
hsa-mir-1306 Fluorouracil 3385 NSC19893 approved resistant cell line (KYSE)
hsa-miR-1306-5p Imatinib 5291 NSC743414 approved resistant High Chronic Myelogenous Leukemia tissue
hsa-miR-1306-5p Paclitaxel 36314 NSC125973 approved sensitive cell line (HS578T)
hsa-miR-1306-5p Doxorubicin 31703 NSC123127 approved sensitive cell line (HS578T)
hsa-miR-1306-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-1306-5p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)

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