pre-miRNA Information
pre-miRNA hsa-mir-4419b   
Genomic Coordinates chr12: 128244506 - 128244573
Description Homo sapiens miR-4419b stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4419b
Sequence 42| GAGGCUGAAGGAAGAUGG |59
Evidence Experimental
Experiments Illumina
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol MBL2   
Synonyms COLEC1, HSMBPC, MBL, MBL2D, MBP, MBP-C, MBP1, MBPD
Description mannose binding lectin 2
Transcript NM_000242   
Expression
Putative miRNA Targets on MBL2
3'UTR of MBL2
(miRNA target sites are highlighted)
>MBL2|NM_000242|3'UTR
   1 AGGGTCATATCACTCAGGCCCTCCTTGTCTTTTTACTGCAACCCACAGGCCCACAGTATGCTTGAAAAGATAAATTATAT
  81 CAATTTCCTCATATCCAGTATTGTTCCTTTTGTGGGCAATCACTAAAAATGATCACTAACAGCACCAACAAAGCAATAAT
 161 AGTAGTAGTAGTAGTTAGCAGCAGCAGTAGTAGTCATGCTAATTATATAATATTTTTAATATATACTATGAGGCCCTATC
 241 TTTTGCATCCTACATTAATTATCTAGTTTAATTAATCTGTAATGCTTTCGATAGTGTTAACTTGCTGCAGTATGAAAATA
 321 AGACGGATTTATTTTTCCATTTACAACAAACACCTGTGCTCTGTTGAGCCTTCCTTTCTGTTTGGGTAGAGGGCTCCCCT
 401 AATGACATCACCACAGTTTAATACCACAGCTTTTTACCAAGTTTCAGGTATTAAGAAAATCTATTTTGTAACTTTCTCTA
 481 TGAACTCTGTTTTCTTTCTAATGAGATATTAAACCATGTAAAGAACATAAATAACAAATCTCAAGCAAACAGCTTCACAA
 561 ATTCTCACACACATACATACCTATATACTCACTTTCTAGATTAAGATATGGGACATTTTTGACTCCCTAGAAGCCCCGTT
 641 ATAACTCCTCCTAGTACTAACTCCTAGGAAAATACTATTCTGACCTCCATGACTGCACAGTAATTTCGTCTGTTTATAAA
 721 CATTGTATAGTTGGAATCATATTGTGTGTAATGTTGTATGTCTTGTTTACTCAGAATTAAGTCTGTGAGATTCATTCATG
 801 TCATGTGTACAAAAGTTTCATCCTTTTCATTGCCATGTAGGGTTCCCTTATATTAATATTCCTCAGTTCATCCATTCTAT
 881 TGTTAATAGGCACTTAAGTGGCTTCCAATTTTTGGCCATGAGGAAGAGAACCCACGAACATTCCTGGACTTGTCTTTTGG
 961 TGGACATGGTGCACTAATTTCACTACCTATCCAGGAGTGGAACTGGTAGAGGATGAGGAAAGCATGTATTCAGCTTTAGT
1041 AGATATTACCAGTTTTCCTAAGTGATTGTATGAATTTATGCTCCTACCGGCAATGTGTGGCAGTCCTAGATGCTCTATGT
1121 GCTTGTAAAAAGTCAATGTTTTCAGTTCTCTTGATTTTCATTATTCCTGTGGATGTAAAGTGATATTTCCCCATGGTTTT
1201 AATCTGTATTTCCCCAACATGTAATAAGGTTGAACACTTTTTTATATGCTTATTGGGCACTTGGGTATCTTCTTTTGTGA
1281 AGTACCCGTTCACATTTTTGTATTTTGTTTAAATTAGTTAGCCAATATTTTTCTTACTGATTTTTAAGTTATTTTTACAT
1361 TCTGAATATGTCCTTTTTAATGTGTATTACAAATATTTTGCTAGTTTTTGACTTGCTCCTAATGTTGAATTTTGATGAAC
1441 AAAATTTCCTAATTTTGAGAAAGTCTTATTTATTCATATTTTCTTTCAAAATTAGTGCTTTTTGTGTCATGTTTAAGAAA
1521 TTTTTGCCCATCCCAAAATCATAAGATATTTTTCATGATTTTGAAACCATGAAGAGATTTTTCATGATTTTGAAATCATG
1601 AAGATATTTTTCCATTTTTTTCTAATAGTTTTATTAATAAACATTCTATCTATTCCTGGTAGAATAGATATCCACTTGAG
1681 ACAGCACTATGTAGGAAAGACCATTTTTCCTCCACTGAACTAGGGTGGTGCATTTTTGTAAGTTAGGTAACTGTATGTGT
1761 GTGTGTCTGTTTCTGGGCTGTCTATTCTAGTCTATTTGTTGATGCTTGTGTCAAACAGTACACTATCTTAATTATTGTAC
1841 ATTTATAGTTGTAACTATAGTCCAGCTTTGTTCTTCTTAAAGTCAAGATTTCCATATAAATATTAGAAACAGCTTCTCAA
1921 TTTCTACAAAATCCTGATGAGGTTTCTACTGGGACCACATTGAGTCTATCAATCAACTTATGCAGAACTGGCAACTTACT
2001 ACTGAATCTCTAATCAATGTTCATCATGTATCGCTTCATGTAACTAGAATTTCTTTAACTTAATTGCTATGTTTTGACAT
2081 TTTTAGTTTAAAAACCTTGTATATCTTGTTTTGGTGGTTTTAGTGATTTTAATAATATATTTTAAATATTTTTTCTTTTC
2161 TATTGTTGTACACAGAAATACAGTTAAGTTTTGTGTGTAGTCTTACGATGTTTAGTAAACTCAATAAGTTTATTTCTTAA
2241 ATCTAGTAATTTGTAGATTCCTCTGGATTTTGTATATGCATAGTCATGTAAGCTGAAAATATGGCAATACTTGCTTCTTC
2321 CCAATTGCTTTACCTTTTTTCTTACCTTATTGCACTGGTTAGCAACCCCAATACAGAGACCACCAGATCAGGTATAGACT
2401 CCTGAAAGACAATATAATGAAGTGCTCCAGTCAGGCCTATCTAAACTGGATTCACAGCTCTGTCACTTAATTGCTACATG
2481 ATCTAGAGCCAGTTACTTTGTGTTTCAGCCATGTATTTGCAGCTGAGAGAAAATAATCATTCTTATTTCATGAAAATTGT
2561 GGGGATGATGAAATAAGTTAACACCTTTAAAGTGTGTAGTAAAGTATCAGGATACTATATTTTAGGTCTTAATACACACA
2641 GTTATGCCGCTAGATACATGCTTTTTAATGAGATAATGTGATATTATACATAACACATATCGATTTTTAAAAATTAAATC
2721 AACCTTGCTTTGATGGAATAAACTCCATTTAGTCACA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' gguAGAAGGAAGUCGGag 5'
             |: | :|||||||  
Target 5' actTTGTGTTTCAGCCat 3'
2495 - 2512 131.00 -10.70
2
miRNA  3' gguagaaggAAGUCGGAg 5'
                   ||||||:| 
Target 5' aagcatgtaTTCAGCTTt 3'
1020 - 1037 129.00 -10.40
3
miRNA  3' gguaGAAGGAAGUCGGAg 5'
              || : || ||||| 
Target 5' tgtgCTCTGTTGAGCCTt 3'
355 - 372 118.00 -9.80
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
880012 3 ClinVar
880011 7 ClinVar
300146 99 ClinVar
300145 282 ClinVar
300144 289 ClinVar
300143 324 ClinVar
879647 366 ClinVar
300142 447 ClinVar
300141 674 ClinVar
300140 675 ClinVar
879646 708 ClinVar
879645 783 ClinVar
300139 865 ClinVar
300138 937 ClinVar
300137 953 ClinVar
878195 966 ClinVar
300136 1088 ClinVar
300135 1134 ClinVar
300134 1135 ClinVar
300133 1136 ClinVar
300132 1144 ClinVar
878194 1213 ClinVar
877160 1252 ClinVar
300131 1275 ClinVar
300130 1287 ClinVar
300129 1429 ClinVar
877159 1448 ClinVar
300128 1452 ClinVar
300127 1498 ClinVar
300126 1568 ClinVar
300125 1569 ClinVar
300124 1691 ClinVar
300123 1694 ClinVar
300122 1695 ClinVar
300121 1711 ClinVar
879953 1743 ClinVar
300120 1819 ClinVar
879952 1839 ClinVar
300119 1857 ClinVar
300118 1879 ClinVar
300117 1913 ClinVar
300116 1996 ClinVar
879599 2032 ClinVar
300115 2033 ClinVar
300114 2040 ClinVar
300113 2048 ClinVar
300112 2066 ClinVar
300111 2067 ClinVar
878132 2129 ClinVar
878131 2207 ClinVar
878130 2209 ClinVar
300110 2219 ClinVar
300109 2388 ClinVar
300108 2450 ClinVar
878129 2457 ClinVar
300107 2470 ClinVar
300106 2477 ClinVar
877097 2648 ClinVar
300105 2702 ClinVar
300104 2727 ClinVar
877096 2751 ClinVar
COSN30152056 11 COSMIC
COSN31497758 20 COSMIC
COSN24311974 23 COSMIC
COSN26562692 39 COSMIC
COSN30472011 42 COSMIC
COSN30149705 43 COSMIC
COSN30490530 44 COSMIC
COSN30503024 44 COSMIC
COSN31553138 56 COSMIC
COSN31575191 69 COSMIC
COSN31604808 76 COSMIC
COSN26983887 79 COSMIC
COSN30107393 87 COSMIC
COSN30485865 90 COSMIC
COSN30188398 122 COSMIC
COSN30492903 127 COSMIC
COSN30457175 133 COSMIC
COSN30185751 141 COSMIC
COSN2533192 179 COSMIC
COSN1120054 196 COSMIC
COSN30110681 291 COSMIC
COSN8711972 362 COSMIC
COSN26395185 434 COSMIC
COSN1492248 508 COSMIC
COSN8186358 700 COSMIC
COSN21071590 872 COSMIC
COSN21525738 955 COSMIC
COSN16484218 1416 COSMIC
COSN16490559 1422 COSMIC
COSN16484892 1440 COSMIC
COSN6973399 1534 COSMIC
COSN17842754 1678 COSMIC
COSN30066219 1831 COSMIC
COSN5876704 1843 COSMIC
COSN1492247 1881 COSMIC
COSN14535900 2004 COSMIC
COSN27077038 2033 COSMIC
COSN22673377 2134 COSMIC
COSN17182768 2329 COSMIC
COSN26098216 2392 COSMIC
COSN10069135 2396 COSMIC
COSN1492246 2416 COSMIC
COSN27836818 2681 COSMIC
COSN24851618 2687 COSMIC
rs2506 2388 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs371397104 3 dbSNP
rs966784363 4 dbSNP
rs1368193089 5 dbSNP
rs202025794 6 dbSNP
rs777309633 7 dbSNP
rs755609929 8 dbSNP
rs752152264 12 dbSNP
rs781048996 13 dbSNP
rs1419175265 18 dbSNP
rs1190722193 19 dbSNP
rs754966073 20 dbSNP
rs1281723887 27 dbSNP
rs780978797 27 dbSNP
rs199798659 34 dbSNP
rs1352154752 36 dbSNP
rs766212532 38 dbSNP
rs1263964457 39 dbSNP
rs1219068116 42 dbSNP
rs535901347 43 dbSNP
rs573500466 44 dbSNP
rs1235097189 48 dbSNP
rs1212531738 57 dbSNP
rs1253672778 60 dbSNP
rs556709033 69 dbSNP
rs1371328966 74 dbSNP
rs1441281803 85 dbSNP
rs536961249 90 dbSNP
rs1011311483 92 dbSNP
rs553395892 99 dbSNP
rs1000167296 100 dbSNP
rs551363666 104 dbSNP
rs1181176425 107 dbSNP
rs1458834863 114 dbSNP
rs759071747 115 dbSNP
rs751026580 116 dbSNP
rs1436389177 117 dbSNP
rs193077443 142 dbSNP
rs1401785175 149 dbSNP
rs34180095 150 dbSNP
rs1391971175 154 dbSNP
rs1331046689 165 dbSNP
rs1240121696 176 dbSNP
rs1304582668 176 dbSNP
rs1375306603 176 dbSNP
rs1013170359 185 dbSNP
rs1231552801 190 dbSNP
rs896089919 199 dbSNP
rs539065105 218 dbSNP
rs566832416 219 dbSNP
rs1343942511 222 dbSNP
rs1028970730 224 dbSNP
rs1252110439 228 dbSNP
rs776286808 230 dbSNP
rs1177891698 237 dbSNP
rs1250185627 239 dbSNP
rs536950074 246 dbSNP
rs918319404 271 dbSNP
rs1455373594 274 dbSNP
rs1173698627 278 dbSNP
rs547119833 279 dbSNP
rs940992392 281 dbSNP
rs886047051 282 dbSNP
rs1037158878 285 dbSNP
rs886047050 289 dbSNP
rs762165162 290 dbSNP
rs1329783796 292 dbSNP
rs1301085248 306 dbSNP
rs1330128336 308 dbSNP
rs146097239 313 dbSNP
rs1259628157 317 dbSNP
rs1315471534 319 dbSNP
rs561485547 320 dbSNP
rs56196250 321 dbSNP
rs551192639 324 dbSNP
rs922535672 325 dbSNP
rs1189231163 327 dbSNP
rs976590773 338 dbSNP
rs1266466558 339 dbSNP
rs1429303877 352 dbSNP
rs1195541745 353 dbSNP
rs1421779177 385 dbSNP
rs1465110898 391 dbSNP
rs1165836146 392 dbSNP
rs1397313393 393 dbSNP
rs1456884089 400 dbSNP
rs956082557 406 dbSNP
rs1294999052 412 dbSNP
rs1363047447 413 dbSNP
rs1384299829 417 dbSNP
rs769034186 423 dbSNP
rs1000281538 427 dbSNP
rs1384485686 445 dbSNP
rs374583038 447 dbSNP
rs1440968379 450 dbSNP
rs866238369 466 dbSNP
rs1364085222 467 dbSNP
rs1264821948 468 dbSNP
rs1486042704 470 dbSNP
rs991111065 471 dbSNP
rs1261304744 484 dbSNP
rs939243382 485 dbSNP
rs1416880956 496 dbSNP
rs1022963364 502 dbSNP
rs565616679 503 dbSNP
rs977904135 517 dbSNP
rs1164634406 523 dbSNP
rs1346319362 526 dbSNP
rs966813748 542 dbSNP
rs569639170 549 dbSNP
rs1022774030 554 dbSNP
rs1490670186 565 dbSNP
rs1358217323 567 dbSNP
rs1399061274 575 dbSNP
rs1312918713 584 dbSNP
rs1013361080 590 dbSNP
rs545364944 596 dbSNP
rs1220436659 607 dbSNP
rs756573836 614 dbSNP
rs1352913943 626 dbSNP
rs989515614 629 dbSNP
rs1317519135 634 dbSNP
rs1238605892 635 dbSNP
rs954148026 637 dbSNP
rs1283686650 638 dbSNP
rs896051076 639 dbSNP
rs1028315752 641 dbSNP
rs1334160700 641 dbSNP
rs1211818333 642 dbSNP
rs1239456302 650 dbSNP
rs1482285820 654 dbSNP
rs998432695 655 dbSNP
rs1409347465 665 dbSNP
rs1036372033 667 dbSNP
rs886047049 674 dbSNP
rs56213573 675 dbSNP
rs897991483 678 dbSNP
rs1004307319 685 dbSNP
rs1364931804 690 dbSNP
rs886206841 707 dbSNP
rs558872633 708 dbSNP
rs55906813 720 dbSNP
rs1301818076 722 dbSNP
rs1421054740 724 dbSNP
rs542336319 739 dbSNP
rs1157415074 745 dbSNP
rs1049247345 749 dbSNP
rs941108443 753 dbSNP
rs1307034450 754 dbSNP
rs189703968 758 dbSNP
rs888227240 761 dbSNP
rs1126881 766 dbSNP
rs184873845 777 dbSNP
rs1378981049 778 dbSNP
rs1310731847 780 dbSNP
rs567802378 783 dbSNP
rs537278489 786 dbSNP
rs932329762 799 dbSNP
rs1480964331 800 dbSNP
rs577754412 804 dbSNP
rs1197904143 805 dbSNP
rs927852986 806 dbSNP
rs1238123089 807 dbSNP
rs1042258171 808 dbSNP
rs142826643 810 dbSNP
rs1426817050 813 dbSNP
rs56129213 815 dbSNP
rs56311691 818 dbSNP
rs934470440 819 dbSNP
rs1204577608 824 dbSNP
rs945181024 828 dbSNP
rs1466756128 832 dbSNP
rs1329157113 833 dbSNP
rs1376071916 835 dbSNP
rs924434726 841 dbSNP
rs775830842 842 dbSNP
rs978624153 847 dbSNP
rs557572803 850 dbSNP
rs55714260 865 dbSNP
rs1023078078 869 dbSNP
rs745948590 879 dbSNP
rs1223965890 881 dbSNP
rs1469354133 882 dbSNP
rs1201435749 884 dbSNP
rs546984996 898 dbSNP
rs536635133 908 dbSNP
rs1432816265 918 dbSNP
rs139256308 919 dbSNP
rs1326912912 920 dbSNP
rs1466673873 923 dbSNP
rs1167996309 924 dbSNP
rs1399437628 928 dbSNP
rs1405929555 931 dbSNP
rs1325242427 933 dbSNP
rs976707969 935 dbSNP
rs550795478 936 dbSNP
rs886047048 937 dbSNP
rs1270931863 939 dbSNP
rs1342614858 943 dbSNP
rs886047047 953 dbSNP
rs1216862920 958 dbSNP
rs531172943 959 dbSNP
rs1336069649 966 dbSNP
rs565294067 972 dbSNP
rs1288380894 982 dbSNP
rs1035907032 985 dbSNP
rs779079469 986 dbSNP
rs1317081366 987 dbSNP
rs1004338491 993 dbSNP
rs1478630403 995 dbSNP
rs1200547454 996 dbSNP
rs770959533 997 dbSNP
rs898116752 1002 dbSNP
rs1016374536 1004 dbSNP
rs1403990136 1005 dbSNP
rs749182517 1017 dbSNP
rs1027147649 1021 dbSNP
rs1006370985 1022 dbSNP
rs888174623 1025 dbSNP
rs1398430390 1031 dbSNP
rs995036744 1035 dbSNP
rs1049958247 1043 dbSNP
rs932304024 1045 dbSNP
rs1054827436 1052 dbSNP
rs746904850 1054 dbSNP
rs1282875813 1064 dbSNP
rs1356348039 1071 dbSNP
rs900835449 1078 dbSNP
rs1224669770 1081 dbSNP
rs1288659986 1082 dbSNP
rs56095345 1088 dbSNP
rs1042291100 1089 dbSNP
rs35648179 1092 dbSNP
rs934564072 1094 dbSNP
rs915097213 1095 dbSNP
rs924550707 1099 dbSNP
rs1053607084 1113 dbSNP
rs11003121 1134 dbSNP
rs11595876 1135 dbSNP
rs115639140 1136 dbSNP
rs386743749 1137 dbSNP
rs991985506 1137 dbSNP
rs886047046 1144 dbSNP
rs1243181027 1165 dbSNP
rs1397858634 1167 dbSNP
rs908805644 1173 dbSNP
rs1036093193 1174 dbSNP
rs1340370122 1190 dbSNP
rs1448216442 1209 dbSNP
rs191589143 1212 dbSNP
rs1351896935 1224 dbSNP
rs1192617709 1227 dbSNP
rs1445351097 1229 dbSNP
rs1345360357 1237 dbSNP
rs1201660598 1238 dbSNP
rs1253517728 1249 dbSNP
rs1441369294 1254 dbSNP
rs972120253 1257 dbSNP
rs10082466 1275 dbSNP
rs1239954627 1276 dbSNP
rs1437522078 1281 dbSNP
rs1177852761 1285 dbSNP
rs551861672 1287 dbSNP
rs150837380 1288 dbSNP
rs1323020621 1307 dbSNP
rs953557076 1317 dbSNP
rs1170858564 1322 dbSNP
rs1401530904 1326 dbSNP
rs1466224974 1333 dbSNP
rs1333886272 1340 dbSNP
rs1375333084 1343 dbSNP
rs1027592228 1361 dbSNP
rs1261057121 1367 dbSNP
rs1013075119 1369 dbSNP
rs1216057909 1370 dbSNP
rs751078989 1373 dbSNP
rs1322142148 1381 dbSNP
rs1340034995 1390 dbSNP
rs550106208 1396 dbSNP
rs1259913784 1397 dbSNP
rs141410154 1403 dbSNP
rs1197758935 1404 dbSNP
rs1267840020 1412 dbSNP
rs1428110822 1416 dbSNP
rs765789768 1418 dbSNP
rs1377294639 1420 dbSNP
rs1478150252 1421 dbSNP
rs577771508 1429 dbSNP
rs1003214298 1430 dbSNP
rs900953030 1437 dbSNP
rs1465605199 1440 dbSNP
rs148385740 1445 dbSNP
rs1403377181 1448 dbSNP
rs186828712 1452 dbSNP
rs1298656493 1454 dbSNP
rs1344557772 1463 dbSNP
rs998544839 1464 dbSNP
rs1411974041 1473 dbSNP
rs1042071696 1475 dbSNP
rs1420936978 1476 dbSNP
rs867246078 1478 dbSNP
rs893710077 1480 dbSNP
rs1043007790 1481 dbSNP
rs1489304828 1482 dbSNP
rs1207846188 1485 dbSNP
rs1488772136 1487 dbSNP
rs947168965 1492 dbSNP
rs56009657 1498 dbSNP
rs1055666435 1499 dbSNP
rs35937235 1504 dbSNP
rs1184244631 1520 dbSNP
rs1477550711 1520 dbSNP
rs932475937 1522 dbSNP
rs1456714168 1527 dbSNP
rs1461056212 1533 dbSNP
rs182107601 1535 dbSNP
rs192591672 1537 dbSNP
rs1041072468 1546 dbSNP
rs944117100 1547 dbSNP
rs1323499317 1549 dbSNP
rs538391080 1549 dbSNP
rs1242321571 1558 dbSNP
rs1290823914 1562 dbSNP
rs1354644961 1567 dbSNP
rs886047045 1568 dbSNP
rs754268753 1569 dbSNP
rs764567357 1572 dbSNP
rs1271950616 1576 dbSNP
rs866543098 1576 dbSNP
rs931588963 1577 dbSNP
rs1485546816 1581 dbSNP
rs920163824 1582 dbSNP
rs1258860199 1584 dbSNP
rs1422638461 1585 dbSNP
rs909437543 1595 dbSNP
rs1212738156 1599 dbSNP
rs1164483152 1613 dbSNP
rs985013870 1617 dbSNP
rs1381263617 1619 dbSNP
rs1421925166 1622 dbSNP
rs753281254 1632 dbSNP
rs1160017757 1644 dbSNP
rs953668032 1664 dbSNP
rs1315161882 1665 dbSNP
rs1029565622 1669 dbSNP
rs958821808 1673 dbSNP
rs1314323791 1678 dbSNP
rs997721718 1681 dbSNP
rs965481700 1685 dbSNP
rs1354081226 1690 dbSNP
rs10824792 1691 dbSNP
rs35327474 1694 dbSNP
rs35768126 1695 dbSNP
rs879548110 1696 dbSNP
rs1257879235 1701 dbSNP
rs1482337365 1705 dbSNP
rs542709043 1706 dbSNP
rs12254557 1711 dbSNP
rs1239331347 1722 dbSNP
rs529374068 1743 dbSNP
rs147320014 1744 dbSNP
rs1399803876 1746 dbSNP
rs1176115767 1755 dbSNP
rs1360348942 1759 dbSNP
rs570969534 1767 dbSNP
rs528646585 1771 dbSNP
rs566059561 1775 dbSNP
rs1377643011 1784 dbSNP
rs1444080422 1788 dbSNP
rs549261163 1790 dbSNP
rs1448701792 1794 dbSNP
rs1306874048 1798 dbSNP
rs1040855803 1816 dbSNP
rs774307463 1819 dbSNP
rs1303701834 1823 dbSNP
rs528868684 1832 dbSNP
rs1203114895 1839 dbSNP
rs1036415723 1840 dbSNP
rs1459523749 1845 dbSNP
rs940658855 1849 dbSNP
rs865801620 1852 dbSNP
rs1179182363 1855 dbSNP
rs2120132 1857 dbSNP
rs984788843 1870 dbSNP
rs1478578606 1871 dbSNP
rs2120131 1879 dbSNP
rs920175419 1882 dbSNP
rs1479168994 1883 dbSNP
rs1175163470 1887 dbSNP
rs375995120 1888 dbSNP
rs1400919460 1894 dbSNP
rs1467160364 1896 dbSNP
rs1326814941 1901 dbSNP
rs1353660648 1906 dbSNP
rs922230209 1907 dbSNP
rs1276759233 1912 dbSNP
rs2165813 1913 dbSNP
rs1222964494 1914 dbSNP
rs1278969832 1916 dbSNP
rs1292365803 1920 dbSNP
rs1221183613 1930 dbSNP
rs1217294924 1932 dbSNP
rs1272950270 1934 dbSNP
rs1452486006 1941 dbSNP
rs937569678 1943 dbSNP
rs966249088 1955 dbSNP
rs564195306 1959 dbSNP
rs1308448197 1960 dbSNP
rs1489748847 1961 dbSNP
rs1198032966 1962 dbSNP
rs769748088 1963 dbSNP
rs1223999000 1966 dbSNP
rs1019748963 1971 dbSNP
rs1478531613 1976 dbSNP
rs541257961 1983 dbSNP
rs558118437 1987 dbSNP
rs1166032742 1988 dbSNP
rs1279362157 1989 dbSNP
rs751460283 1996 dbSNP
rs1405732877 2002 dbSNP
rs1348005138 2005 dbSNP
rs1304266621 2012 dbSNP
rs1020676946 2017 dbSNP
rs1363920250 2024 dbSNP
rs1404608133 2025 dbSNP
rs543238249 2027 dbSNP
rs1342395601 2030 dbSNP
rs977172176 2032 dbSNP
rs544901610 2033 dbSNP
rs1021286670 2038 dbSNP
rs1359219618 2039 dbSNP
rs2099903 2040 dbSNP
rs2099902 2048 dbSNP
rs1179794310 2057 dbSNP
rs1488944749 2063 dbSNP
rs886047044 2066 dbSNP
rs542103508 2067 dbSNP
rs1473111676 2081 dbSNP
rs1164746706 2083 dbSNP
rs1383107882 2084 dbSNP
rs1003082932 2095 dbSNP
rs1159414680 2097 dbSNP
rs1362765137 2104 dbSNP
rs887210411 2110 dbSNP
rs1317786763 2116 dbSNP
rs1047104814 2119 dbSNP
rs995922851 2123 dbSNP
rs1313585363 2126 dbSNP
rs1269597837 2127 dbSNP
rs1382426241 2129 dbSNP
rs907035410 2131 dbSNP
rs1286276281 2136 dbSNP
rs898531780 2138 dbSNP
rs1198623309 2147 dbSNP
rs1489821243 2153 dbSNP
rs1262009865 2155 dbSNP
rs1036189799 2160 dbSNP
rs1189472801 2161 dbSNP
rs937603974 2162 dbSNP
rs771499080 2170 dbSNP
rs1241211197 2176 dbSNP
rs940773013 2182 dbSNP
rs540680258 2186 dbSNP
rs1049035142 2188 dbSNP
rs1045947371 2191 dbSNP
rs1451949794 2192 dbSNP
rs1281661066 2197 dbSNP
rs932020712 2206 dbSNP
rs191761980 2207 dbSNP
rs747317698 2209 dbSNP
rs1404913412 2211 dbSNP
rs1335240139 2212 dbSNP
rs2083771 2219 dbSNP
rs924997625 2220 dbSNP
rs1311979630 2230 dbSNP
rs377026690 2231 dbSNP
rs1337127562 2259 dbSNP
rs1236382308 2263 dbSNP
rs924124668 2266 dbSNP
rs1278612769 2277 dbSNP
rs1345037416 2279 dbSNP
rs975036852 2283 dbSNP
rs1261164638 2288 dbSNP
rs1290755641 2290 dbSNP
rs1199009171 2295 dbSNP
rs537565729 2300 dbSNP
rs963942845 2301 dbSNP
rs1181290058 2310 dbSNP
rs1417108133 2310 dbSNP
rs567403997 2324 dbSNP
rs1479048327 2327 dbSNP
rs1174437699 2334 dbSNP
rs1429168516 2336 dbSNP
rs1333987075 2346 dbSNP
rs967101227 2352 dbSNP
rs1394721759 2367 dbSNP
rs1391191315 2375 dbSNP
rs571684597 2376 dbSNP
rs1381140413 2378 dbSNP
rs56344844 2381 dbSNP
rs1331386922 2383 dbSNP
rs2506 2388 dbSNP
rs534933470 2396 dbSNP
rs1322258504 2417 dbSNP
rs1034639200 2425 dbSNP
rs753476301 2430 dbSNP
rs565923965 2432 dbSNP
rs549271116 2435 dbSNP
rs1253024342 2446 dbSNP
rs115323074 2448 dbSNP
rs56325023 2450 dbSNP
rs1268295888 2455 dbSNP
rs1263739066 2457 dbSNP
rs756632737 2458 dbSNP
rs1186640376 2460 dbSNP
rs886047043 2470 dbSNP
rs1055810963 2473 dbSNP
rs1478201016 2475 dbSNP
rs55855374 2477 dbSNP
rs532921953 2478 dbSNP
rs1245602794 2480 dbSNP
rs1461793008 2487 dbSNP
rs1164248657 2496 dbSNP
rs1042749 2500 dbSNP
rs1001510824 2511 dbSNP
rs1406353832 2512 dbSNP
rs907454314 2524 dbSNP
rs1344263226 2534 dbSNP
rs1400087204 2540 dbSNP
rs1297637394 2550 dbSNP
rs1305757413 2551 dbSNP
rs1226385939 2558 dbSNP
rs1205180347 2568 dbSNP
rs1361364475 2569 dbSNP
rs753171873 2570 dbSNP
rs56212603 2578 dbSNP
rs564075072 2579 dbSNP
rs1268461764 2583 dbSNP
rs1488619732 2585 dbSNP
rs1264164195 2595 dbSNP
rs1223254499 2604 dbSNP
rs559417329 2605 dbSNP
rs1260233221 2606 dbSNP
rs1428485420 2617 dbSNP
rs183826308 2648 dbSNP
rs186505323 2649 dbSNP
rs571427443 2655 dbSNP
rs900503238 2661 dbSNP
rs1364651728 2666 dbSNP
rs1298364376 2671 dbSNP
rs561816743 2674 dbSNP
rs369533862 2684 dbSNP
rs1040816924 2687 dbSNP
rs944962845 2693 dbSNP
rs924212479 2694 dbSNP
rs936463381 2697 dbSNP
rs1361379139 2701 dbSNP
rs114932753 2702 dbSNP
rs1384648273 2703 dbSNP
rs182548321 2709 dbSNP
rs963642453 2711 dbSNP
rs1454814034 2713 dbSNP
rs914288208 2720 dbSNP
rs1407047951 2725 dbSNP
rs138449358 2727 dbSNP
rs1258998339 2730 dbSNP
rs958737690 2743 dbSNP
rs1374791176 2744 dbSNP
rs1245519070 2746 dbSNP
rs543480009 2748 dbSNP
rs758996436 2751 dbSNP
rs1439959611 2758 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084079. RNA binding protein: AGO2. Condition:CLIP_hippuristanol_rep2_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ggUAGAAGGA---AGUCGGAg 5'
            ||: ||||   ||||||| 
Target 5' agAUUCUCCUGCCUCAGCCUc 3'
4 - 24
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084079
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_hippuristanol_rep2_AbnovaAb
Location of target site ENST00000373968.3 | 3UTR | AAGAGAUUCUCCUGCCUCAGCCUCCCAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
390 hsa-miR-4419b Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT061343 WEE1 WEE1 G2 checkpoint kinase 2 4
MIRT072743 GLCE glucuronic acid epimerase 2 2
MIRT180549 TXNIP thioredoxin interacting protein 2 2
MIRT186147 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT271044 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT334761 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 6
MIRT443279 TSPAN15 tetraspanin 15 2 2
MIRT447047 ZNF439 zinc finger protein 439 2 2
MIRT447351 KIF6 kinesin family member 6 2 2
MIRT448925 CKS1B CDC28 protein kinase regulatory subunit 1B 2 2
MIRT452899 PSD4 pleckstrin and Sec7 domain containing 4 2 2
MIRT453087 SUMF2 sulfatase modifying factor 2 2 2
MIRT454071 SLC35E3 solute carrier family 35 member E3 2 2
MIRT456216 LIX1L limb and CNS expressed 1 like 2 6
MIRT456951 LRP10 LDL receptor related protein 10 2 2
MIRT458025 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT459999 RFT1 RFT1 homolog 2 2
MIRT460046 CDCP1 CUB domain containing protein 1 2 2
MIRT460982 STK17B serine/threonine kinase 17b 2 2
MIRT464405 URM1 ubiquitin related modifier 1 2 2
MIRT466256 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 2
MIRT466536 TBXA2R thromboxane A2 receptor 2 2
MIRT470922 PLD5 phospholipase D family member 5 2 8
MIRT472835 MTMR10 myotubularin related protein 10 2 6
MIRT473352 MEMO1 mediator of cell motility 1 2 2
MIRT475504 HSP90B1 heat shock protein 90 beta family member 1 2 2
MIRT478862 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT480898 BCL9L B-cell CLL/lymphoma 9 like 2 2
MIRT482686 NXN nucleoredoxin 2 4
MIRT484128 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT486172 TLE3 transducin like enhancer of split 3 2 4
MIRT486539 CLCN7 chloride voltage-gated channel 7 2 2
MIRT486588 ZNF619 zinc finger protein 619 2 2
MIRT495475 ALDOA aldolase, fructose-bisphosphate A 2 2
MIRT495536 TXNRD2 thioredoxin reductase 2 2 2
MIRT495566 UNC5C unc-5 netrin receptor C 2 2
MIRT495719 PADI1 peptidyl arginine deiminase 1 2 2
MIRT495890 CLOCK clock circadian regulator 2 2
MIRT495932 SLC7A5P2 solute carrier family 7 member 5 pseudogene 2 2 2
MIRT496026 ZBED3 zinc finger BED-type containing 3 2 2
MIRT496216 PAX6 paired box 6 2 2
MIRT496349 VAMP1 vesicle associated membrane protein 1 2 2
MIRT496354 PPY pancreatic polypeptide 2 2
MIRT496400 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT496416 PARVB parvin beta 2 2
MIRT496458 N6AMT1 N-6 adenine-specific DNA methyltransferase 1 2 2
MIRT496519 GINS2 GINS complex subunit 2 2 2
MIRT496562 SLC39A9 solute carrier family 39 member 9 2 2
MIRT498605 KRT8 keratin 8 2 2
MIRT503434 SLC25A45 solute carrier family 25 member 45 2 6
MIRT503573 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT503847 ATP13A4 ATPase 13A4 2 4
MIRT504247 LHPP phospholysine phosphohistidine inorganic pyrophosphate phosphatase 2 4
MIRT505606 SLC35F1 solute carrier family 35 member F1 2 2
MIRT507749 CERS2 ceramide synthase 2 2 4
MIRT508411 C1orf210 chromosome 1 open reading frame 210 2 6
MIRT508508 RSRC1 arginine and serine rich coiled-coil 1 2 6
MIRT508944 AK4 adenylate kinase 4 2 4
MIRT509460 ZNF587 zinc finger protein 587 2 6
MIRT509862 ZNF641 zinc finger protein 641 2 4
MIRT511397 IKZF3 IKAROS family zinc finger 3 2 6
MIRT512517 BTBD19 BTB domain containing 19 2 2
MIRT513507 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 2 6
MIRT514155 TMEM145 transmembrane protein 145 2 4
MIRT514486 SLPI secretory leukocyte peptidase inhibitor 2 4
MIRT514521 SHISA9 shisa family member 9 2 2
MIRT514970 KLLN killin, p53-regulated DNA replication inhibitor 2 4
MIRT515030 IRAK4 interleukin 1 receptor associated kinase 4 2 6
MIRT515963 C9orf156 tRNA methyltransferase O 2 2
MIRT516092 ZBTB8OS zinc finger and BTB domain containing 8 opposite strand 2 4
MIRT517223 PRIM1 DNA primase subunit 1 2 4
MIRT517459 PEX26 peroxisomal biogenesis factor 26 2 4
MIRT517790 EFCAB11 EF-hand calcium binding domain 11 2 2
MIRT517979 DSCR3 DSCR3 arrestin fold containing 2 2
MIRT519458 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT519599 ZNF805 zinc finger protein 805 2 2
MIRT520339 UBXN2A UBX domain protein 2A 2 2
MIRT521345 RPP14 ribonuclease P/MRP subunit p14 2 2
MIRT521571 PTPLB 3-hydroxyacyl-CoA dehydratase 2 1 1
MIRT523382 GSG2 histone H3 associated protein kinase 2 8
MIRT524106 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT524886 ARHGAP11A Rho GTPase activating protein 11A 2 4
MIRT528772 CD1D CD1d molecule 2 2
MIRT530665 TRIM56 tripartite motif containing 56 2 2
MIRT531107 PEX13 peroxisomal biogenesis factor 13 2 2
MIRT531575 ILDR1 immunoglobulin like domain containing receptor 1 2 2
MIRT535173 PLEKHB2 pleckstrin homology domain containing B2 2 4
MIRT544168 HEYL hes related family bHLH transcription factor with YRPW motif-like 2 2
MIRT550582 SLC2A5 solute carrier family 2 member 5 2 2
MIRT551039 GDE1 glycerophosphodiester phosphodiesterase 1 2 4
MIRT551295 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT551339 MRE11A MRE11 homolog, double strand break repair nuclease 2 2
MIRT552092 SLFN12L schlafen family member 12 like 2 6
MIRT555403 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT557087 HOXB3 homeobox B3 2 2
MIRT559388 ATP11C ATPase phospholipid transporting 11C 2 2
MIRT560305 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT561028 LIN7C lin-7 homolog C, crumbs cell polarity complex component 2 2
MIRT562460 COX6B1 cytochrome c oxidase subunit 6B1 2 4
MIRT562982 PARK7 Parkinsonism associated deglycase 2 2
MIRT563548 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT564412 EMILIN2 elastin microfibril interfacer 2 2 4
MIRT569437 PCGF3 polycomb group ring finger 3 2 2
MIRT572097 EXOC8 exocyst complex component 8 2 2
MIRT575571 Cd99 CD99 antigen 2 2
MIRT575789 Tnfrsf10b tumor necrosis factor receptor superfamily, member 10b 2 2
MIRT576975 Lmtk2 lemur tyrosine kinase 2 2 2
MIRT610864 ARSA arylsulfatase A 2 2
MIRT614061 NTPCR nucleoside-triphosphatase, cancer-related 2 2
MIRT614141 THAP1 THAP domain containing 1 2 6
MIRT615235 BROX BRO1 domain and CAAX motif containing 2 2
MIRT617429 ANP32E acidic nuclear phosphoprotein 32 family member E 2 4
MIRT618882 MBL2 mannose binding lectin 2 2 2
MIRT618984 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619196 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620323 AQP6 aquaporin 6 2 2
MIRT621960 STX7 syntaxin 7 2 2
MIRT622057 SSBP2 single stranded DNA binding protein 2 2 2
MIRT624930 FBXW2 F-box and WD repeat domain containing 2 2 2
MIRT624986 ZNF665 zinc finger protein 665 2 4
MIRT625463 ZNF681 zinc finger protein 681 2 4
MIRT625497 SMAD9 SMAD family member 9 2 2
MIRT625599 KLHL23 kelch like family member 23 2 2
MIRT625668 C2orf48 chromosome 2 open reading frame 48 2 2
MIRT625888 INADL PATJ, crumbs cell polarity complex component 2 2
MIRT626161 NFYA nuclear transcription factor Y subunit alpha 2 2
MIRT626238 ZNF749 zinc finger protein 749 2 2
MIRT626631 SLC30A6 solute carrier family 30 member 6 2 2
MIRT626994 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627898 OLFML2A olfactomedin like 2A 2 2
MIRT627988 NDRG3 NDRG family member 3 2 2
MIRT628324 CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 2 2
MIRT628549 ZNF701 zinc finger protein 701 2 2
MIRT629464 WIZ widely interspaced zinc finger motifs 2 2
MIRT630527 BAZ2A bromodomain adjacent to zinc finger domain 2A 2 2
MIRT631487 KLHL21 kelch like family member 21 2 2
MIRT631957 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT632178 CCL22 C-C motif chemokine ligand 22 2 2
MIRT632282 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT632321 TMEM185B transmembrane protein 185B 2 2
MIRT632853 IGF1 insulin like growth factor 1 2 2
MIRT632862 HSPA2 heat shock protein family A (Hsp70) member 2 2 2
MIRT633322 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT633398 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633930 DNAH9 dynein axonemal heavy chain 9 2 2
MIRT634785 CBFA2T2 CBFA2/RUNX1 translocation partner 2 2 2
MIRT634851 ABCF1 ATP binding cassette subfamily F member 1 2 2
MIRT636370 OGFRL1 opioid growth factor receptor like 1 2 2
MIRT637219 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT637690 PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D 2 2
MIRT639196 TRAPPC2 trafficking protein particle complex 2 2 2
MIRT639599 CD3EAP CD3e molecule associated protein 2 2
MIRT639681 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT640669 ARSK arylsulfatase family member K 2 2
MIRT642377 ZNF581 zinc finger protein 581 2 2
MIRT642403 ZNF556 zinc finger protein 556 2 2
MIRT645079 UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII 2 2
MIRT646475 ZNF669 zinc finger protein 669 2 2
MIRT647325 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT647490 ZNF639 zinc finger protein 639 2 2
MIRT647989 PDE12 phosphodiesterase 12 2 2
MIRT648196 CENPN centromere protein N 2 2
MIRT649006 MRPL49 mitochondrial ribosomal protein L49 2 2
MIRT650457 ZNF141 zinc finger protein 141 2 2
MIRT650533 CCDC77 coiled-coil domain containing 77 2 2
MIRT650999 ZNF770 zinc finger protein 770 2 2
MIRT653832 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 4
MIRT655734 NRXN3 neurexin 3 2 2
MIRT657577 GRSF1 G-rich RNA sequence binding factor 1 2 2
MIRT658610 ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 2 2
MIRT658633 ENAH ENAH, actin regulator 2 2
MIRT659820 CASP16 caspase 16, pseudogene 2 2
MIRT661142 ZNF43 zinc finger protein 43 2 2
MIRT661201 MPPE1 metallophosphoesterase 1 2 2
MIRT661436 MANSC1 MANSC domain containing 1 2 2
MIRT661498 CHMP1B charged multivesicular body protein 1B 2 2
MIRT661682 ZNF623 zinc finger protein 623 2 2
MIRT661796 NLRC3 NLR family CARD domain containing 3 2 2
MIRT661808 NUP85 nucleoporin 85 2 2
MIRT661861 ZNF766 zinc finger protein 766 2 2
MIRT661889 EXOSC6 exosome component 6 2 2
MIRT662291 SLC29A4 solute carrier family 29 member 4 2 2
MIRT662515 ANGPT4 angiopoietin 4 2 2
MIRT662682 LRRC47 leucine rich repeat containing 47 2 2
MIRT662716 C10orf111 chromosome 10 open reading frame 111 2 4
MIRT662834 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT662890 PCDHA6 protocadherin alpha 6 2 2
MIRT663134 ULBP3 UL16 binding protein 3 2 2
MIRT663710 ABHD17B abhydrolase domain containing 17B 2 2
MIRT663869 MUC20 mucin 20, cell surface associated 2 2
MIRT664267 NMUR1 neuromedin U receptor 1 2 2
MIRT664510 POLR3K RNA polymerase III subunit K 2 2
MIRT664659 TRIM65 tripartite motif containing 65 2 2
MIRT664849 HUS1 HUS1 checkpoint clamp component 2 2
MIRT664944 CARD6 caspase recruitment domain family member 6 2 4
MIRT665348 YES1 YES proto-oncogene 1, Src family tyrosine kinase 2 2
MIRT665514 UTP15 UTP15, small subunit processome component 2 2
MIRT665648 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT665668 TRAF1 TNF receptor associated factor 1 2 2
MIRT665692 TNPO3 transportin 3 2 2
MIRT665741 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT665850 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT665940 TBC1D19 TBC1 domain family member 19 2 4
MIRT666005 SYNJ2BP synaptojanin 2 binding protein 2 2
MIRT666172 SNX27 sorting nexin family member 27 2 4
MIRT666373 SHOX short stature homeobox 2 2
MIRT667004 PDPN podoplanin 2 4
MIRT667185 NR2F6 nuclear receptor subfamily 2 group F member 6 2 4
MIRT667603 LIPC lipase C, hepatic type 2 2
MIRT667828 IRGQ immunity related GTPase Q 2 2
MIRT667862 IPCEF1 interaction protein for cytohesin exchange factors 1 2 2
MIRT668296 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 4
MIRT668463 FAM208A family with sequence similarity 208 member A 2 2
MIRT668580 ELMSAN1 ELM2 and Myb/SANT domain containing 1 2 4
MIRT669012 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669103 CDK19 cyclin dependent kinase 19 2 2
MIRT670073 ZNF783 zinc finger family member 783 2 2
MIRT670326 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT670756 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670964 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT670985 MED17 mediator complex subunit 17 2 2
MIRT671195 ZNF891 zinc finger protein 891 2 2
MIRT672423 SLC10A6 solute carrier family 10 member 6 2 2
MIRT672495 YIPF4 Yip1 domain family member 4 2 2
MIRT672537 MGAM maltase-glucoamylase 2 2
MIRT672749 ZNF585B zinc finger protein 585B 2 4
MIRT673390 ZNF124 zinc finger protein 124 2 2
MIRT673452 ZNF583 zinc finger protein 583 2 2
MIRT673917 DCTN6 dynactin subunit 6 2 2
MIRT673952 ZNF500 zinc finger protein 500 2 2
MIRT674102 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674167 BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 2 2
MIRT674206 FUT2 fucosyltransferase 2 2 2
MIRT674452 PURB purine rich element binding protein B 2 4
MIRT674687 PLCE1 phospholipase C epsilon 1 2 2
MIRT674701 TMEM59 transmembrane protein 59 2 2
MIRT674800 NPR1 natriuretic peptide receptor 1 2 4
MIRT675247 MAK male germ cell associated kinase 2 2
MIRT676012 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676374 APTX aprataxin 2 2
MIRT676834 TNFSF15 TNF superfamily member 15 2 2
MIRT678193 CRCP CGRP receptor component 2 2
MIRT678293 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT679532 RAB36 RAB36, member RAS oncogene family 2 2
MIRT679669 RABAC1 Rab acceptor 1 2 2
MIRT679850 GPR75 G protein-coupled receptor 75 2 2
MIRT680533 PRIM2 DNA primase subunit 2 2 2
MIRT680563 ZNF584 zinc finger protein 584 2 2
MIRT680577 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT680849 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT680888 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1 like 2 2
MIRT680940 EVC EvC ciliary complex subunit 1 2 2
MIRT680964 SLC15A1 solute carrier family 15 member 1 2 4
MIRT681017 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT681065 PAQR7 progestin and adipoQ receptor family member 7 2 2
MIRT681209 ZNF638 zinc finger protein 638 2 2
MIRT681291 RFC2 replication factor C subunit 2 2 2
MIRT681366 BRI3BP BRI3 binding protein 2 2
MIRT681517 STAT2 signal transducer and activator of transcription 2 2 2
MIRT681549 ZNF738 zinc finger protein 738 2 2
MIRT681574 ABHD15 abhydrolase domain containing 15 2 2
MIRT681597 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 2
MIRT681806 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681912 SLC11A2 solute carrier family 11 member 2 2 2
MIRT681953 SLC19A3 solute carrier family 19 member 3 2 2
MIRT682037 AGXT2 alanine--glyoxylate aminotransferase 2 2 4
MIRT682111 ITGA3 integrin subunit alpha 3 2 4
MIRT682190 SLC38A7 solute carrier family 38 member 7 2 2
MIRT682247 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682394 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682554 EXOSC2 exosome component 2 2 2
MIRT682665 CASP8 caspase 8 2 2
MIRT683283 ZNF99 zinc finger protein 99 2 2
MIRT683359 SCARF1 scavenger receptor class F member 1 2 2
MIRT683453 ACOT2 acyl-CoA thioesterase 2 2 2
MIRT683596 GSTCD glutathione S-transferase C-terminal domain containing 2 2
MIRT683661 ZNF695 zinc finger protein 695 2 2
MIRT683770 CPE carboxypeptidase E 2 2
MIRT683807 NOTO notochord homeobox 2 2
MIRT684462 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684525 C1orf174 chromosome 1 open reading frame 174 2 2
MIRT684985 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685012 CXorf56 chromosome X open reading frame 56 2 2
MIRT685072 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685115 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685477 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT685831 SLC27A1 solute carrier family 27 member 1 2 2
MIRT686032 UMPS uridine monophosphate synthetase 2 2
MIRT686559 TPM3 tropomyosin 3 2 2
MIRT687287 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT687309 OTUD7B OTU deubiquitinase 7B 2 2
MIRT688085 GLUL glutamate-ammonia ligase 2 2
MIRT688168 GABPB1 GA binding protein transcription factor beta subunit 1 2 2
MIRT688584 DARS2 aspartyl-tRNA synthetase 2, mitochondrial 2 2
MIRT688601 CYCS cytochrome c, somatic 2 2
MIRT688921 C11orf84 chromosome 11 open reading frame 84 2 2
MIRT689285 C5AR2 complement component 5a receptor 2 2 2
MIRT689622 AKAP6 A-kinase anchoring protein 6 2 2
MIRT690051 C6orf141 chromosome 6 open reading frame 141 2 2
MIRT690224 C5orf45 MRN complex interacting protein 2 2
MIRT690272 CAMLG calcium modulating ligand 2 2
MIRT690331 MRPS30 mitochondrial ribosomal protein S30 2 2
MIRT690480 ZNF33A zinc finger protein 33A 2 2
MIRT690526 ZNF566 zinc finger protein 566 2 2
MIRT690581 MICA MHC class I polypeptide-related sequence A 2 2
MIRT690675 RPF2 ribosome production factor 2 homolog 2 2
MIRT690790 ZNF589 zinc finger protein 589 2 2
MIRT690873 PLEKHG2 pleckstrin homology and RhoGEF domain containing G2 2 2
MIRT691142 HJURP Holliday junction recognition protein 2 2
MIRT691158 APOL6 apolipoprotein L6 2 2
MIRT691288 CENPM centromere protein M 2 2
MIRT691435 PRICKLE4 prickle planar cell polarity protein 4 2 2
MIRT691749 IKBKG inhibitor of nuclear factor kappa B kinase subunit gamma 2 2
MIRT691833 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT691885 GXYLT2 glucoside xylosyltransferase 2 2 2
MIRT691947 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT692047 PAK1IP1 PAK1 interacting protein 1 2 2
MIRT692668 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT692767 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT692859 ZSWIM1 zinc finger SWIM-type containing 1 2 2
MIRT693122 SCNM1 sodium channel modifier 1 2 2
MIRT693514 MOB3A MOB kinase activator 3A 2 2
MIRT693648 ACBD7 acyl-CoA binding domain containing 7 2 2
MIRT693688 MXRA7 matrix remodeling associated 7 2 2
MIRT694078 RNASEH2B ribonuclease H2 subunit B 2 2
MIRT694163 SLC36A2 solute carrier family 36 member 2 2 2
MIRT694262 RGS9BP regulator of G protein signaling 9 binding protein 2 2
MIRT694506 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT694556 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT694639 MRI1 methylthioribose-1-phosphate isomerase 1 2 2
MIRT694710 CD300LG CD300 molecule like family member g 2 2
MIRT694753 LLGL1 LLGL1, scribble cell polarity complex component 2 2
MIRT694896 ZNF417 zinc finger protein 417 2 2
MIRT695158 BTD biotinidase 2 2
MIRT695275 CD209 CD209 molecule 2 2
MIRT695434 TCF23 transcription factor 23 2 2
MIRT695817 SRD5A1 steroid 5 alpha-reductase 1 2 2
MIRT696008 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT696345 SLC35D2 solute carrier family 35 member D2 2 2
MIRT696368 EIF2S3 eukaryotic translation initiation factor 2 subunit gamma 2 2
MIRT696533 C3 complement C3 2 2
MIRT696779 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT697075 PSMC4 proteasome 26S subunit, ATPase 4 2 2
MIRT697498 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT697630 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT697931 TXNDC16 thioredoxin domain containing 16 2 2
MIRT697966 TSPYL1 TSPY like 1 2 2
MIRT698237 TMEM216 transmembrane protein 216 2 2
MIRT698643 TES testin LIM domain protein 2 2
MIRT698661 TERF2 telomeric repeat binding factor 2 2 2
MIRT698974 SPAST spastin 2 2
MIRT699047 SOAT1 sterol O-acyltransferase 1 2 2
MIRT699193 SLX4IP SLX4 interacting protein 2 2
MIRT699586 SIKE1 suppressor of IKBKE 1 2 2
MIRT699759 SEPHS1 selenophosphate synthetase 1 2 2
MIRT700350 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT700402 RAB13 RAB13, member RAS oncogene family 2 2
MIRT700418 QDPR quinoid dihydropteridine reductase 2 2
MIRT700546 PTBP2 polypyrimidine tract binding protein 2 2 2
MIRT700774 PLA2G4A phospholipase A2 group IVA 2 2
MIRT700875 PER2 period circadian clock 2 2 2
MIRT700952 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT701077 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT701172 PACS2 phosphofurin acidic cluster sorting protein 2 2 2
MIRT701479 NEK9 NIMA related kinase 9 2 2
MIRT701661 MYH9 myosin heavy chain 9 2 2
MIRT701779 MSL2 MSL complex subunit 2 2 2
MIRT702137 MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 2 2
MIRT702494 KIAA1328 KIAA1328 2 2
MIRT703058 GTPBP10 GTP binding protein 10 2 2
MIRT703224 GOLGA3 golgin A3 2 2
MIRT703620 FBXO45 F-box protein 45 2 2
MIRT703657 FAM60A SIN3-HDAC complex associated factor 2 2
MIRT703765 FAM118A family with sequence similarity 118 member A 2 2
MIRT703832 EVI5 ecotropic viral integration site 5 2 2
MIRT703862 ERN1 endoplasmic reticulum to nucleus signaling 1 2 2
MIRT704664 CLCC1 chloride channel CLIC like 1 2 2
MIRT704812 CDC73 cell division cycle 73 2 2
MIRT705608 APAF1 apoptotic peptidase activating factor 1 2 2
MIRT705625 AP1S3 adaptor related protein complex 1 sigma 3 subunit 2 2
MIRT705682 ANKRD40 ankyrin repeat domain 40 2 2
MIRT705813 AKNA AT-hook transcription factor 2 2
MIRT706238 SYT15 synaptotagmin 15 2 2
MIRT706567 EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 2 2
MIRT709657 DFFB DNA fragmentation factor subunit beta 2 2
MIRT710609 ZNF555 zinc finger protein 555 2 2
MIRT711717 IREB2 iron responsive element binding protein 2 2 2
MIRT714122 TMED9 transmembrane p24 trafficking protein 9 2 2
MIRT715204 FKTN fukutin 2 2
MIRT718260 ZDHHC8 zinc finger DHHC-type containing 8 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4419b Fluorouracil 3385 NSC19893 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Cisplatin + Decitabine resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-mir-4419b Androstenedione+Anastrozole sensitive cell line (MCF-7)

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