pre-miRNA Information
pre-miRNA hsa-mir-1273h   
Genomic Coordinates chr16: 24203116 - 24203231
Description Homo sapiens miR-1273h stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-1273h-5p
Sequence 33| CUGGGAGGUCAAGGCUGCAGU |53
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1028034199 14 dbSNP
rs542383563 18 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol MRPS16   
Synonyms CGI-132, COXPD2, MRP-S16, RPMS16
Description mitochondrial ribosomal protein S16
Transcript NM_016065   
Expression
Putative miRNA Targets on MRPS16
3'UTR of MRPS16
(miRNA target sites are highlighted)
>MRPS16|NM_016065|3'UTR
   1 ATGAGCTGACTTTAGTGAGCATAGCAGTGGGAACAAGGTCAAGGTCCTTTTGAAACACTGCAGCGATCTTAATTTTGTTA
  81 GATTTGGAGTTCAATAAATGGAGTATCCTGAGTTGCCCTTGCTCTTCTGGCCTGGCCTGCACAGGGCCCAGGGAGAGATT
 161 TGTTCTTGTGTGACTTAGAGCTGGGTGTGGGTACTAATTAGCTTTTTTCGACTTTGTCTTGGGATAGACAGTGGCTATGG
 241 GAGGATTGGACTTTTGAGTTGGGCTCTGGGTCTCTTGGACAACTTTACAATTTACTGGCTTCCAAGACTTCCTGCTTCAA
 321 AACCCCCAGCCAGACTATTCATGGCCCATTCAGATCTTCATGTTCATCCCACAAGTGCAAGAACAGTTAACCTTTCTTAA
 401 TTGATTTTTGTAATTGGAGGTTTATATTGTCTTGCCTAATGCATATTCTCTTTTTTTTTTTTTTTTTGAGACGGAGTCTT
 481 GTTCTGTTGCCAGGCTGGAGTGCGGTGGTGCAATCTCAGCTCACTGCAATCTCCACCTCCTGGGTTCAAGAGGTTCTCCT
 561 GCCTCAGCCTCCTGAGTAGCCGGGGAGCTACAAGCATGCACCACCACACCCAGCTAATTTTTTTTTTTTTTTTGAGAGGA
 641 GTCTCGCTCTGTCGCCCAGGCTTGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCTGTCTCCTGGGTTCATGCCAT
 721 TCTCCTGCTTCAGCCTCCCGAGTAGTCCCAGGAGTAGCTGGGACTACAGGTGCCCACCACCACACCCAGCTAATTTTTTT
 801 GTATTTTTAGTAGAGATGGGGTTTCACCATGTTATCCAGGATGGTTTTGATCTCCTGACCTCGTGATCCGCCCGCCTTGG
 881 CCTCCCAAAAGTGCTGGGATTATAGGCGTGAGCCACCGCCCGGGCAAATTTTTGTATTTTTAGTAGAGATGGGGTTTCAC
 961 CGTGTTGGCCAGGATGGTCTCAATCTGACCTTGTGATCTGCCCACCTCGGCCTCCCAAAGTGCTAGGATTACTGGCGTGA
1041 GCCACCACTCCTAGCCTTAATGCATATTCTTAAATATACAAAGGTAGATTTGTTATGAAAATTGCTTTGGGGCTCTAATA
1121 ACCTACCTTTTAAGAATGAGAAACTGCTGGGCTTAAGGGAGTTCAGTATGAATCAAGATTGAACCATTCAAATGTGGCTG
1201 TGATTTCTGCATATATCATAGATGGGATCCTTCTGAGAATACTGGAATAGGGAATTAGGACACCAAGCCAATTCAGCTGT
1281 GAACCTTATTCTTGTACTTTTCTTTCTTGCTGGTAATTTTATGGAGCAGGTTAAGAAGGCTGCTCTGTGTTAGGATAAAC
1361 TGTATACCAATAATGTTGACAACCTGTAATGAGTGTTGCATTTTACTTCTTGTATCTTTTCCTTCCTACCTTGATGCCAG
1441 TAATCTATAAGGGATCTTTATAGTTTGAATGTATTTGAATAACTTCAGTATACTTTAGTTCTACTTTTTTATTTGACTCA
1521 CAACCATTCTTAGGTCTCAAGTATTCCCATGTGTTTTAAAAGCCTGAAGTCAGTGAGATGAAATTCAACATCAAGAATTT
1601 GAAGTAACTTGTAAGGAAAAATAATATAAAGATACCATTGGGGCAGTGGCTCACACCTGTAATCTCAGCACTTTGGGAGG
1681 CTGAGGTGGAAGGATCACTTGAAGCCAGAGTTTGAGACCAGCCTGTGCAACACAGCAAGACCCCGTCTCTACAAAAACTT
1761 AAAAAATTAGCTGGCTGTGGTGTTGCTCACCCATAGTTCCAGCTACTCGGGAAGCTGAGGCAGTAAGATCACTTGAGCCC
1841 AGGAGGCCGATGCTGCAGTGAACTGTGATTGTTCCACTACAGTCCAGCCTGGGTGACAGAGAAAAGAAAAAGAAAACATT
1921 ACATAATTTGGCTAGAGCATAATAATTTGATTTTCTGGTTTTTGAAAATTTGAGTTGCAATAAAAGGATATTTCAGTGTG
2001 CGATTTCAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ugacGUCGGAACUGGAGGGUc 5'
              | ||||||:||||||| 
Target 5' ccgcCCGCCTTGGCCTCCCAa 3'
868 - 888 173.00 -26.20
2
miRNA  3' ugacGUCGGAACUGGAGGGUc 5'
              || ||| |:||||||| 
Target 5' tgccCA-CCTCGGCCTCCCAa 3'
999 - 1018 160.00 -20.70
3
miRNA  3' ugACGUCGGAACUGGAGGGUc 5'
            | | ||:|  :||||||: 
Target 5' tcTCCTGCTTCAGCCTCCCGa 3'
721 - 741 139.00 -18.00
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
300712 451 ClinVar
300704 634 ClinVar
300699 857 ClinVar
300694 1294 ClinVar
300690 1503 ClinVar
COSN30456173 46 COSMIC
COSN30456197 47 COSMIC
COSN30498736 64 COSMIC
COSN31539865 99 COSMIC
COSN22599469 144 COSMIC
COSN31524909 210 COSMIC
COSN7068209 396 COSMIC
COSN1500243 423 COSMIC
COSN5883398 1135 COSMIC
COSN30499819 1179 COSMIC
COSN30122968 1306 COSMIC
COSN30289997 1383 COSMIC
COSN25780241 1411 COSMIC
COSN25778500 1413 COSMIC
COSM8915130 1559 COSMIC
COSN21538071 1595 COSMIC
COSN30114063 1595 COSMIC
COSN30123165 1633 COSMIC
COSN28565045 1645 COSMIC
COSN30667868 1665 COSMIC
COSN1122343 1670 COSMIC
COSN20046248 1681 COSMIC
COSN28853465 1707 COSMIC
COSN31591003 1745 COSMIC
COSN30128131 1839 COSMIC
COSN28568201 1879 COSMIC
COSN28857495 1899 COSMIC
COSN30129020 1912 COSMIC
COSN28201843 1996 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1457791352 2 dbSNP
rs768838682 5 dbSNP
rs1467603217 6 dbSNP
rs377271845 11 dbSNP
rs7075371 13 dbSNP
rs1208512036 21 dbSNP
rs778863355 22 dbSNP
rs1266613233 24 dbSNP
rs952519857 27 dbSNP
rs753328308 28 dbSNP
rs770692603 29 dbSNP
rs1311701212 37 dbSNP
rs1165332331 39 dbSNP
rs749034956 41 dbSNP
rs777576361 47 dbSNP
rs1163004038 61 dbSNP
rs886047198 65 dbSNP
rs973085337 76 dbSNP
rs539530542 86 dbSNP
rs1330653744 88 dbSNP
rs1035500895 94 dbSNP
rs536907771 99 dbSNP
rs923184891 103 dbSNP
rs1378113971 108 dbSNP
rs1231108446 110 dbSNP
rs971949423 118 dbSNP
rs886047197 121 dbSNP
rs1197444438 122 dbSNP
rs1272973164 131 dbSNP
rs961380322 134 dbSNP
rs1190160614 145 dbSNP
rs1238442676 153 dbSNP
rs1475044842 155 dbSNP
rs1186088811 158 dbSNP
rs1016037718 167 dbSNP
rs970787503 168 dbSNP
rs1289993899 170 dbSNP
rs766015986 174 dbSNP
rs1416128107 178 dbSNP
rs565826277 181 dbSNP
rs1326833407 190 dbSNP
rs1358367287 190 dbSNP
rs1480701692 193 dbSNP
rs1388399450 206 dbSNP
rs952943534 209 dbSNP
rs1237056976 210 dbSNP
rs766114937 212 dbSNP
rs1340740383 216 dbSNP
rs547392259 217 dbSNP
rs893825697 218 dbSNP
rs1267920469 223 dbSNP
rs1346452919 226 dbSNP
rs1391588294 229 dbSNP
rs1002332895 230 dbSNP
rs1053771859 241 dbSNP
rs1485580302 243 dbSNP
rs906687377 245 dbSNP
rs999795130 246 dbSNP
rs1009803757 247 dbSNP
rs1192686205 248 dbSNP
rs892700699 259 dbSNP
rs1173105209 274 dbSNP
rs181757719 280 dbSNP
rs561738482 281 dbSNP
rs1299785421 285 dbSNP
rs550177586 286 dbSNP
rs868175291 295 dbSNP
rs1360877505 296 dbSNP
rs1399044533 302 dbSNP
rs532037332 306 dbSNP
rs944229134 309 dbSNP
rs1332328878 311 dbSNP
rs936342266 316 dbSNP
rs190204061 323 dbSNP
rs1050130920 337 dbSNP
rs1049972935 340 dbSNP
rs931059294 341 dbSNP
rs1288635542 344 dbSNP
rs1362400501 353 dbSNP
rs1204781295 369 dbSNP
rs919604644 381 dbSNP
rs923070374 383 dbSNP
rs186383176 384 dbSNP
rs1394446701 397 dbSNP
rs939948341 401 dbSNP
rs1253082711 410 dbSNP
rs928515017 410 dbSNP
rs1212456175 416 dbSNP
rs1466736167 442 dbSNP
rs11598278 444 dbSNP
rs201473932 448 dbSNP
rs1223975125 450 dbSNP
rs886047196 451 dbSNP
rs1392424675 452 dbSNP
rs75554141 452 dbSNP
rs1322285839 453 dbSNP
rs1368092845 453 dbSNP
rs1439382662 454 dbSNP
rs1277519416 458 dbSNP
rs1354885092 460 dbSNP
rs984539114 466 dbSNP
rs1371569848 467 dbSNP
rs113258240 468 dbSNP
rs1180443881 468 dbSNP
rs1210608478 468 dbSNP
rs1252483489 468 dbSNP
rs1358699301 468 dbSNP
rs892096228 468 dbSNP
rs1325123670 469 dbSNP
rs551135342 470 dbSNP
rs567157597 470 dbSNP
rs886047195 472 dbSNP
rs12249492 473 dbSNP
rs936343274 475 dbSNP
rs1033745206 486 dbSNP
rs560241550 502 dbSNP
rs1174607415 503 dbSNP
rs1002216813 504 dbSNP
rs1466683087 508 dbSNP
rs1334021369 511 dbSNP
rs970774311 517 dbSNP
rs1025122157 520 dbSNP
rs1009689630 522 dbSNP
rs1342595528 523 dbSNP
rs12257322 529 dbSNP
rs1272716225 539 dbSNP
rs772787486 540 dbSNP
rs1332840222 545 dbSNP
rs1200596566 553 dbSNP
rs1054005884 559 dbSNP
rs1480253644 561 dbSNP
rs1175365290 564 dbSNP
rs886047194 566 dbSNP
rs11000563 567 dbSNP
rs1424111179 578 dbSNP
rs574459836 581 dbSNP
rs1000941780 582 dbSNP
rs888762048 587 dbSNP
rs886047193 593 dbSNP
rs1050183378 599 dbSNP
rs12257264 600 dbSNP
rs1296885916 604 dbSNP
rs1404816298 606 dbSNP
rs1415767361 608 dbSNP
rs1292975665 610 dbSNP
rs1310660946 615 dbSNP
rs1353758366 634 dbSNP
rs1389414487 634 dbSNP
rs555061429 634 dbSNP
rs886047192 634 dbSNP
rs1216106333 635 dbSNP
rs901573747 639 dbSNP
rs145765900 642 dbSNP
rs1483490425 642 dbSNP
rs1281904196 645 dbSNP
rs940503544 645 dbSNP
rs1193873327 646 dbSNP
rs909128044 648 dbSNP
rs1426160314 653 dbSNP
rs576324784 654 dbSNP
rs1379875055 661 dbSNP
rs1435769692 663 dbSNP
rs367784695 669 dbSNP
rs931319367 675 dbSNP
rs1302632886 676 dbSNP
rs926655352 677 dbSNP
rs868814192 678 dbSNP
rs374499787 683 dbSNP
rs1367468308 684 dbSNP
rs1348465008 688 dbSNP
rs1233358244 696 dbSNP
rs1277953584 701 dbSNP
rs970826554 701 dbSNP
rs1216899696 702 dbSNP
rs1241143467 703 dbSNP
rs1270802325 703 dbSNP
rs866967459 710 dbSNP
rs1192394986 713 dbSNP
rs1270151030 715 dbSNP
rs1455100878 718 dbSNP
rs1173515445 728 dbSNP
rs981321053 729 dbSNP
rs1160187412 739 dbSNP
rs886047191 740 dbSNP
rs886047190 741 dbSNP
rs886047189 742 dbSNP
rs969897187 746 dbSNP
rs1022781208 748 dbSNP
rs1440123583 752 dbSNP
rs991333622 753 dbSNP
rs1435799219 755 dbSNP
rs958121983 767 dbSNP
rs539672097 768 dbSNP
rs1283167282 773 dbSNP
rs1314737128 777 dbSNP
rs1032766101 778 dbSNP
rs1253114286 780 dbSNP
rs1432130469 786 dbSNP
rs181174969 793 dbSNP
rs1442009816 794 dbSNP
rs1178110544 801 dbSNP
rs1407593830 801 dbSNP
rs1399198809 802 dbSNP
rs1186536146 803 dbSNP
rs776839878 804 dbSNP
rs1474788394 811 dbSNP
rs1395326785 814 dbSNP
rs1460972921 815 dbSNP
rs1378982013 817 dbSNP
rs1442715937 820 dbSNP
rs1278757759 825 dbSNP
rs1370853039 829 dbSNP
rs1240068891 830 dbSNP
rs902515132 830 dbSNP
rs1273365325 834 dbSNP
rs769094094 835 dbSNP
rs1271877924 847 dbSNP
rs1440038227 848 dbSNP
rs886047188 857 dbSNP
rs1008472074 858 dbSNP
rs1468865944 860 dbSNP
rs1279280335 862 dbSNP
rs1208675924 863 dbSNP
rs189233953 863 dbSNP
rs535564295 868 dbSNP
rs1049899011 869 dbSNP
rs372270481 870 dbSNP
rs1352554878 873 dbSNP
rs1449942035 874 dbSNP
rs1028686005 877 dbSNP
rs1354399474 878 dbSNP
rs1230977886 888 dbSNP
rs1339429772 891 dbSNP
rs1359943489 891 dbSNP
rs1215673804 892 dbSNP
rs1272904791 895 dbSNP
rs898209437 896 dbSNP
rs1286212074 902 dbSNP
rs997179677 903 dbSNP
rs1355264316 907 dbSNP
rs1485478084 908 dbSNP
rs567915175 913 dbSNP
rs1374867086 915 dbSNP
rs1037107508 917 dbSNP
rs1417293864 918 dbSNP
rs529388897 918 dbSNP
rs549760990 921 dbSNP
rs561890630 922 dbSNP
rs1355689723 923 dbSNP
rs183739521 925 dbSNP
rs887591740 925 dbSNP
rs1326522411 930 dbSNP
rs1408904732 935 dbSNP
rs1226050768 942 dbSNP
rs11538570 945 dbSNP
rs746084425 950 dbSNP
rs1416745935 952 dbSNP
rs1237081225 961 dbSNP
rs1281527651 962 dbSNP
rs937298262 967 dbSNP
rs1347522491 971 dbSNP
rs989967984 973 dbSNP
rs1209011200 974 dbSNP
rs1376186962 977 dbSNP
rs112218454 979 dbSNP
rs1447725532 983 dbSNP
rs1192525643 990 dbSNP
rs1240337887 991 dbSNP
rs1475307906 992 dbSNP
rs1256544263 1000 dbSNP
rs1185457418 1008 dbSNP
rs552333359 1009 dbSNP
rs1032469425 1015 dbSNP
rs978165954 1016 dbSNP
rs550900634 1017 dbSNP
rs761233663 1018 dbSNP
rs966729992 1023 dbSNP
rs1483904236 1029 dbSNP
rs1174142637 1036 dbSNP
rs1233451324 1037 dbSNP
rs1019608736 1046 dbSNP
rs1203692429 1047 dbSNP
rs1305864593 1049 dbSNP
rs1385186975 1053 dbSNP
rs980773582 1054 dbSNP
rs1315638370 1059 dbSNP
rs1008503400 1061 dbSNP
rs890015289 1062 dbSNP
rs1028916777 1067 dbSNP
rs530487067 1074 dbSNP
rs898656911 1076 dbSNP
rs1036775075 1085 dbSNP
rs1304729588 1087 dbSNP
rs939758428 1088 dbSNP
rs1334371868 1092 dbSNP
rs906898745 1094 dbSNP
rs189498545 1096 dbSNP
rs184662992 1105 dbSNP
rs1204728751 1110 dbSNP
rs957105376 1113 dbSNP
rs1032538123 1114 dbSNP
rs12761045 1124 dbSNP
rs758213060 1126 dbSNP
rs562729930 1127 dbSNP
rs979989109 1138 dbSNP
rs1194201707 1147 dbSNP
rs878877218 1149 dbSNP
rs79140810 1150 dbSNP
rs915793465 1151 dbSNP
rs1452645744 1163 dbSNP
rs1156377115 1164 dbSNP
rs368863086 1164 dbSNP
rs997189298 1179 dbSNP
rs1327239028 1180 dbSNP
rs901487354 1187 dbSNP
rs1015103243 1206 dbSNP
rs1004664884 1214 dbSNP
rs1054779957 1216 dbSNP
rs887506199 1219 dbSNP
rs1461650099 1225 dbSNP
rs1416787452 1226 dbSNP
rs1048927862 1267 dbSNP
rs935886020 1271 dbSNP
rs1001767570 1272 dbSNP
rs924428210 1276 dbSNP
rs1337121403 1278 dbSNP
rs748018108 1282 dbSNP
rs905795529 1293 dbSNP
rs558115305 1294 dbSNP
rs767465725 1294 dbSNP
rs778852449 1295 dbSNP
rs986764191 1296 dbSNP
rs1418227777 1304 dbSNP
rs1052849573 1306 dbSNP
rs546133009 1310 dbSNP
rs935450280 1314 dbSNP
rs572240245 1323 dbSNP
rs979657275 1333 dbSNP
rs1391593927 1336 dbSNP
rs780707061 1349 dbSNP
rs954442938 1353 dbSNP
rs1028613252 1364 dbSNP
rs199860739 1364 dbSNP
rs879434906 1376 dbSNP
rs564745765 1383 dbSNP
rs1397674092 1384 dbSNP
rs953488319 1386 dbSNP
rs139703406 1391 dbSNP
rs192915597 1408 dbSNP
rs868436163 1412 dbSNP
rs1292780386 1421 dbSNP
rs1332682706 1435 dbSNP
rs1229531248 1439 dbSNP
rs976305218 1442 dbSNP
rs1015693258 1445 dbSNP
rs568190179 1446 dbSNP
rs1259244778 1447 dbSNP
rs1003935502 1448 dbSNP
rs1186736383 1454 dbSNP
rs188485257 1456 dbSNP
rs1173240620 1462 dbSNP
rs1374141218 1463 dbSNP
rs1321686144 1486 dbSNP
rs1014616438 1490 dbSNP
rs1306585080 1496 dbSNP
rs1388381098 1501 dbSNP
rs2018198 1503 dbSNP
rs770176974 1506 dbSNP
rs56788336 1511 dbSNP
rs1012625105 1515 dbSNP
rs571041393 1517 dbSNP
rs1158821667 1521 dbSNP
rs1283227404 1523 dbSNP
rs1306827547 1523 dbSNP
rs1477497847 1525 dbSNP
rs1225091099 1531 dbSNP
rs1282240727 1538 dbSNP
rs1348245064 1540 dbSNP
rs780557490 1544 dbSNP
rs1254948880 1547 dbSNP
rs1375362467 1550 dbSNP
rs1200364283 1551 dbSNP
rs1433325297 1552 dbSNP
rs375180473 1557 dbSNP
rs1268639556 1560 dbSNP
rs1001325715 1565 dbSNP
rs1216573860 1568 dbSNP
rs1487489991 1571 dbSNP
rs1054409925 1578 dbSNP
rs776907634 1578 dbSNP
rs1288634214 1580 dbSNP
rs935898905 1587 dbSNP
rs905680522 1589 dbSNP
rs1217548578 1590 dbSNP
rs924457580 1595 dbSNP
rs1045636410 1598 dbSNP
rs1435711521 1605 dbSNP
rs528001799 1625 dbSNP
rs566678967 1626 dbSNP
rs548413376 1627 dbSNP
rs144193002 1638 dbSNP
rs563025614 1645 dbSNP
rs1160780507 1652 dbSNP
rs1054858 1655 dbSNP
rs891686375 1674 dbSNP
rs1361311182 1675 dbSNP
rs912610836 1679 dbSNP
rs987285707 1680 dbSNP
rs1158033387 1682 dbSNP
rs1052484188 1687 dbSNP
rs36013827 1687 dbSNP
rs954104789 1704 dbSNP
rs1305461514 1711 dbSNP
rs935319926 1716 dbSNP
rs568271661 1727 dbSNP
rs755618712 1731 dbSNP
rs1133529 1734 dbSNP
rs1276118305 1735 dbSNP
rs750083387 1736 dbSNP
rs1318376023 1742 dbSNP
rs1216010457 1743 dbSNP
rs1194153489 1744 dbSNP
rs184876174 1745 dbSNP
rs925395582 1750 dbSNP
rs1187290121 1752 dbSNP
rs11538573 1754 dbSNP
rs1133537 1755 dbSNP
rs886047187 1761 dbSNP
rs1133539 1766 dbSNP
rs1255436891 1768 dbSNP
rs1133541 1769 dbSNP
rs767133959 1772 dbSNP
rs1207150375 1777 dbSNP
rs761539395 1780 dbSNP
rs1133542 1793 dbSNP
rs1071674 1795 dbSNP
rs1423444363 1796 dbSNP
rs1133544 1805 dbSNP
rs974372633 1808 dbSNP
rs963262473 1809 dbSNP
rs1133548 1818 dbSNP
rs1344699024 1822 dbSNP
rs1260516939 1823 dbSNP
rs1015727218 1825 dbSNP
rs1291565943 1835 dbSNP
rs922125809 1842 dbSNP
rs1273366879 1847 dbSNP
rs532500193 1848 dbSNP
rs754586403 1849 dbSNP
rs752088228 1852 dbSNP
rs1341433825 1853 dbSNP
rs1439963470 1857 dbSNP
rs1398091636 1858 dbSNP
rs886047186 1860 dbSNP
rs1362154957 1863 dbSNP
rs1298583634 1873 dbSNP
rs774631216 1874 dbSNP
rs1375166764 1877 dbSNP
rs766940985 1878 dbSNP
rs1133556 1879 dbSNP
rs763581354 1880 dbSNP
rs1224003530 1884 dbSNP
rs1024043807 1887 dbSNP
rs370316277 1889 dbSNP
rs1013069901 1891 dbSNP
rs1214982151 1892 dbSNP
rs1265713044 1899 dbSNP
rs770856835 1903 dbSNP
rs908113380 1904 dbSNP
rs983146237 1906 dbSNP
rs750746764 1909 dbSNP
rs1202443894 1912 dbSNP
rs1345744183 1913 dbSNP
rs1257514292 1922 dbSNP
rs1216647425 1923 dbSNP
rs1342286765 1929 dbSNP
rs894165371 1936 dbSNP
rs1471329311 1940 dbSNP
rs1300548230 1941 dbSNP
rs1407529192 1944 dbSNP
rs1471676588 1945 dbSNP
rs1054505227 1947 dbSNP
rs1383578730 1947 dbSNP
rs951761867 1954 dbSNP
rs370383392 1957 dbSNP
rs1000131840 1961 dbSNP
rs546070519 1962 dbSNP
rs903069504 1963 dbSNP
rs1362296402 1968 dbSNP
rs1001211111 1975 dbSNP
rs1041574914 1978 dbSNP
rs192848708 2001 dbSNP
rs890285172 2002 dbSNP
rs1377025765 2004 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084079. RNA binding protein: AGO2. Condition:CLIP_hippuristanol_rep2_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084079
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_hippuristanol_rep2_AbnovaAb
Location of target site ENST00000372945.3 | 3UTR | CAAAAGUGCUGGGAUUAUAGGC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
494 hsa-miR-1273h-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT074355 TNRC6A trinucleotide repeat containing 6A 2 2
MIRT100721 TJAP1 tight junction associated protein 1 2 2
MIRT115545 MAZ MYC associated zinc finger protein 2 2
MIRT124982 XIAP X-linked inhibitor of apoptosis 2 4
MIRT139911 BTF3L4 basic transcription factor 3 like 4 2 6
MIRT177183 ARL5B ADP ribosylation factor like GTPase 5B 2 4
MIRT187994 MBD6 methyl-CpG binding domain protein 6 2 2
MIRT207410 MAT2A methionine adenosyltransferase 2A 2 6
MIRT241928 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 2 2
MIRT260110 KLHL21 kelch like family member 21 2 2
MIRT260358 XRCC6 X-ray repair cross complementing 6 2 6
MIRT266428 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT294663 ZNF548 zinc finger protein 548 2 2
MIRT351039 PLEKHB2 pleckstrin homology domain containing B2 2 2
MIRT379943 PRRG4 proline rich and Gla domain 4 2 2
MIRT398983 KAT7 lysine acetyltransferase 7 2 2
MIRT441465 BEST3 bestrophin 3 2 2
MIRT446750 ZNF491 zinc finger protein 491 2 2
MIRT449224 RAD51B RAD51 paralog B 2 2
MIRT450623 AQR aquarius intron-binding spliceosomal factor 2 2
MIRT451090 ZNF584 zinc finger protein 584 2 2
MIRT451558 CIAPIN1 cytokine induced apoptosis inhibitor 1 2 2
MIRT451736 CES3 carboxylesterase 3 2 2
MIRT452411 QDPR quinoid dihydropteridine reductase 2 2
MIRT452559 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT452851 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT452922 DISC1 disrupted in schizophrenia 1 2 2
MIRT453043 TANGO2 transport and golgi organization 2 homolog 2 4
MIRT453097 HOXC4 homeobox C4 2 2
MIRT453297 ZNF394 zinc finger protein 394 2 2
MIRT453593 ZNF557 zinc finger protein 557 2 2
MIRT453787 KBTBD12 kelch repeat and BTB domain containing 12 2 2
MIRT453987 CECR1 adenosine deaminase 2 2 2
MIRT454083 TMEM209 transmembrane protein 209 2 2
MIRT454652 FBXL18 F-box and leucine rich repeat protein 18 2 2
MIRT454753 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 2 2
MIRT455311 TTLL9 tubulin tyrosine ligase like 9 2 2
MIRT456468 SERAC1 serine active site containing 1 2 2
MIRT456554 TOMM20 translocase of outer mitochondrial membrane 20 2 2
MIRT456716 TMEM239 transmembrane protein 239 2 4
MIRT456796 SIGLEC14 sialic acid binding Ig like lectin 14 2 2
MIRT457487 SLC35F6 solute carrier family 35 member F6 2 2
MIRT457999 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT458130 TLCD2 TLC domain containing 2 2 2
MIRT459027 ZNF490 zinc finger protein 490 2 4
MIRT459119 FADS6 fatty acid desaturase 6 2 2
MIRT459315 HAVCR2 hepatitis A virus cellular receptor 2 2 2
MIRT459385 MPLKIP M-phase specific PLK1 interacting protein 2 2
MIRT459412 FAM83B family with sequence similarity 83 member B 2 2
MIRT459974 RFT1 RFT1 homolog 2 2
MIRT460480 FAM105A family with sequence similarity 105 member A 2 6
MIRT460586 FEM1A fem-1 homolog A 2 2
MIRT460920 NOA1 nitric oxide associated 1 2 4
MIRT461072 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT461590 DPH2 DPH2 homolog 2 2
MIRT461854 ZNF317 zinc finger protein 317 2 2
MIRT462176 ACADL acyl-CoA dehydrogenase, long chain 2 2
MIRT462446 GCDH glutaryl-CoA dehydrogenase 2 2
MIRT463854 WNT7B Wnt family member 7B 2 2
MIRT464310 UST uronyl 2-sulfotransferase 2 2
MIRT464815 UBE2B ubiquitin conjugating enzyme E2 B 2 2
MIRT465453 TOR2A torsin family 2 member A 2 2
MIRT466073 TMEM184C transmembrane protein 184C 2 2
MIRT466514 TBXA2R thromboxane A2 receptor 2 2
MIRT467072 SRRD SRR1 domain containing 2 2
MIRT469551 RARA retinoic acid receptor alpha 2 2
MIRT469741 RAB2B RAB2B, member RAS oncogene family 2 2
MIRT470759 PNPLA6 patatin like phospholipase domain containing 6 2 2
MIRT470875 PLXND1 plexin D1 2 2
MIRT470976 PITPNA phosphatidylinositol transfer protein alpha 2 2
MIRT471048 PIM3 Pim-3 proto-oncogene, serine/threonine kinase 2 2
MIRT471215 PHAX phosphorylated adaptor for RNA export 2 2
MIRT471246 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT471286 PGAM4 phosphoglycerate mutase family member 4 2 2
MIRT471467 PDE7B phosphodiesterase 7B 2 2
MIRT473069 MORN4 MORN repeat containing 4 2 4
MIRT473989 LRRC20 leucine rich repeat containing 20 2 2
MIRT474518 KLHDC8A kelch domain containing 8A 2 2
MIRT474990 KANSL1 KAT8 regulatory NSL complex subunit 1 2 2
MIRT475547 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U like 1 2 2
MIRT476350 GIGYF1 GRB10 interacting GYF protein 1 2 2
MIRT477298 EPHB2 EPH receptor B2 2 2
MIRT477933 DPM2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory 2 2
MIRT478282 DDX19A DEAD-box helicase 19A 2 4
MIRT478472 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT478559 CTNND1 catenin delta 1 2 2
MIRT478618 CTDNEP1 CTD nuclear envelope phosphatase 1 2 2
MIRT478834 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT479007 COL5A1 collagen type V alpha 1 chain 2 2
MIRT479166 CLSPN claspin 2 2
MIRT482454 ADAR adenosine deaminase, RNA specific 2 4
MIRT483019 KHSRP KH-type splicing regulatory protein 2 4
MIRT483798 CYP2W1 cytochrome P450 family 2 subfamily W member 1 2 6
MIRT486087 SLC7A5 solute carrier family 7 member 5 2 4
MIRT486304 SIPA1 signal-induced proliferation-associated 1 2 2
MIRT486490 MYH11 myosin heavy chain 11 2 2
MIRT486881 TSPYL4 TSPY like 4 2 2
MIRT487125 NCOR2 nuclear receptor corepressor 2 2 2
MIRT487542 TM6SF2 transmembrane 6 superfamily member 2 2 4
MIRT487676 B3GALT5 beta-1,3-galactosyltransferase 5 2 4
MIRT489251 TTLL1 tubulin tyrosine ligase like 1 2 4
MIRT489276 RBM8A RNA binding motif protein 8A 2 8
MIRT489496 CRLF3 cytokine receptor like factor 3 2 4
MIRT489571 SSBP2 single stranded DNA binding protein 2 2 2
MIRT489694 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT490166 TMEM63C transmembrane protein 63C 2 2
MIRT491199 MLLT1 MLLT1, super elongation complex subunit 2 4
MIRT491260 DHX40 DEAH-box helicase 40 2 2
MIRT491385 HAUS3 HAUS augmin like complex subunit 3 2 2
MIRT491548 YAE1D1 Yae1 domain containing 1 2 2
MIRT492722 PHF12 PHD finger protein 12 2 2
MIRT493866 FAM73B mitoguardin 2 2 4
MIRT494549 BAK1 BCL2 antagonist/killer 1 2 2
MIRT498586 KRT8 keratin 8 2 2
MIRT498722 SNTN sentan, cilia apical structure protein 2 6
MIRT499982 HIST1H2BD histone cluster 1 H2B family member d 2 4
MIRT503414 SLC25A45 solute carrier family 25 member 45 2 6
MIRT508491 FTO FTO, alpha-ketoglutarate dependent dioxygenase 2 2
MIRT508877 METTL14 methyltransferase like 14 2 2
MIRT509622 RRP7A ribosomal RNA processing 7 homolog A 2 4
MIRT510104 IRAK3 interleukin 1 receptor associated kinase 3 2 8
MIRT510139 PDGFRA platelet derived growth factor receptor alpha 2 4
MIRT510353 ZNF703 zinc finger protein 703 2 6
MIRT510620 TMEM167A transmembrane protein 167A 2 4
MIRT510786 SF3B3 splicing factor 3b subunit 3 2 6
MIRT511021 NRF1 nuclear respiratory factor 1 2 2
MIRT513925 GHITM growth hormone inducible transmembrane protein 2 2
MIRT514342 DNAH17 dynein axonemal heavy chain 17 2 4
MIRT515015 SUMF2 sulfatase modifying factor 2 2 2
MIRT515246 DUSP28 dual specificity phosphatase 28 2 2
MIRT516202 RPP30 ribonuclease P/MRP subunit p30 2 2
MIRT516435 ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 2 4
MIRT516666 ZNF860 zinc finger protein 860 2 4
MIRT518373 ZNF250 zinc finger protein 250 2 2
MIRT518930 LSG1 large 60S subunit nuclear export GTPase 1 2 2
MIRT519676 ZNF70 zinc finger protein 70 2 2
MIRT519902 ZFAND4 zinc finger AN1-type containing 4 2 4
MIRT519945 ZCCHC8 zinc finger CCHC-type containing 8 2 2
MIRT520321 UBXN2A UBX domain protein 2A 2 2
MIRT520606 TMEM41B transmembrane protein 41B 2 2
MIRT520663 TMEM11 transmembrane protein 11 2 2
MIRT520852 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT521443 RAD51 RAD51 recombinase 2 2
MIRT521671 PRKAR2A protein kinase cAMP-dependent type II regulatory subunit alpha 2 2
MIRT522281 NKAP NFKB activating protein 2 2
MIRT522333 NCKIPSD NCK interacting protein with SH3 domain 2 8
MIRT522535 MED28 mediator complex subunit 28 2 6
MIRT523478 GNG4 G protein subunit gamma 4 2 2
MIRT523672 FOPNL FGFR1OP N-terminal like 2 2
MIRT523715 FBXW2 F-box and WD repeat domain containing 2 2 4
MIRT523867 ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2 2 4
MIRT524043 DNAJC8 DnaJ heat shock protein family (Hsp40) member C8 2 2
MIRT524167 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT524928 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT526825 PHC1 polyhomeotic homolog 1 2 2
MIRT531017 TDGF1P3 teratocarcinoma-derived growth factor 1 pseudogene 3 2 2
MIRT536085 MBOAT2 membrane bound O-acyltransferase domain containing 2 2 2
MIRT540681 BMP3 bone morphogenetic protein 3 2 2
MIRT541708 TMEM33 transmembrane protein 33 2 2
MIRT541755 KLF8 Kruppel like factor 8 2 2
MIRT541888 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT545714 SPTLC2 serine palmitoyltransferase long chain base subunit 2 2 2
MIRT559054 C19orf47 chromosome 19 open reading frame 47 2 4
MIRT561748 PLAGL2 PLAG1 like zinc finger 2 2 2
MIRT562365 ETV3 ETS variant 3 2 2
MIRT562821 GCFC2 GC-rich sequence DNA-binding factor 2 2 2
MIRT562900 DNAH10OS dynein axonemal heavy chain 10 opposite strand 2 2
MIRT564452 SLC35E2 solute carrier family 35 member E2 2 5
MIRT569111 ONECUT3 one cut homeobox 3 2 2
MIRT569224 SUSD1 sushi domain containing 1 2 2
MIRT570271 ARPC3 actin related protein 2/3 complex subunit 3 2 2
MIRT570498 TFIP11 tuftelin interacting protein 11 2 2
MIRT570844 GPRC5C G protein-coupled receptor class C group 5 member C 2 2
MIRT571311 TPCN2 two pore segment channel 2 2 2
MIRT572077 EXOC8 exocyst complex component 8 2 2
MIRT572116 DNAJC24 DnaJ heat shock protein family (Hsp40) member C24 2 2
MIRT573054 TRIB1 tribbles pseudokinase 1 2 2
MIRT573483 IQSEC3 IQ motif and Sec7 domain 3 2 2
MIRT573656 HES6 hes family bHLH transcription factor 6 2 2
MIRT574343 ZBTB37 zinc finger and BTB domain containing 37 2 2
MIRT576494 Slc35e2 solute carrier family 35, member E2 2 4
MIRT608033 UBLCP1 ubiquitin like domain containing CTD phosphatase 1 2 2
MIRT611326 NANOS1 nanos C2HC-type zinc finger 1 2 2
MIRT613660 KIAA1210 KIAA1210 2 2
MIRT615638 ATF6 activating transcription factor 6 2 2
MIRT618573 RRAD RRAD, Ras related glycolysis inhibitor and calcium channel regulator 2 2
MIRT618865 MBL2 mannose binding lectin 2 2 2
MIRT618962 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619172 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620298 AQP6 aquaporin 6 2 2
MIRT620683 RFTN2 raftlin family member 2 2 2
MIRT621637 UBXN2B UBX domain protein 2B 2 2
MIRT621993 STK4 serine/threonine kinase 4 2 2
MIRT622421 NUDT19 nudix hydrolase 19 2 2
MIRT622804 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT624786 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT624968 ZNF665 zinc finger protein 665 2 4
MIRT625479 SMAD9 SMAD family member 9 2 2
MIRT626594 ACAA2 acetyl-CoA acyltransferase 2 2 4
MIRT626708 TRIM65 tripartite motif containing 65 2 2
MIRT626975 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627489 STRIP2 striatin interacting protein 2 2 2
MIRT628505 ZNF878 zinc finger protein 878 2 2
MIRT628533 ZNF701 zinc finger protein 701 2 2
MIRT628591 TMEM251 transmembrane protein 251 2 2
MIRT628818 SLC25A34 solute carrier family 25 member 34 2 2
MIRT628896 IGSF6 immunoglobulin superfamily member 6 2 2
MIRT628958 UBE2D4 ubiquitin conjugating enzyme E2 D4 (putative) 2 2
MIRT629005 OSBPL10 oxysterol binding protein like 10 2 2
MIRT629059 KIF1C kinesin family member 1C 2 2
MIRT629192 PAPOLA poly(A) polymerase alpha 2 2
MIRT629346 TMPRSS11BNL TMPRSS11B N-terminal like, pseudogene 2 2
MIRT629447 WIZ widely interspaced zinc finger motifs 2 2
MIRT629696 XKR4 XK related 4 2 2
MIRT629737 SCD5 stearoyl-CoA desaturase 5 2 2
MIRT629896 SPATA5 spermatogenesis associated 5 2 2
MIRT629953 GLP2R glucagon like peptide 2 receptor 2 2
MIRT630023 MTL5 testis expressed metallothionein like protein 2 2
MIRT630181 TLN1 talin 1 2 2
MIRT630325 PAQR5 progestin and adipoQ receptor family member 5 2 2
MIRT630389 MYH9 myosin heavy chain 9 2 4
MIRT630695 EXTL3 exostosin like glycosyltransferase 3 2 2
MIRT631054 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT631130 SYNJ2 synaptojanin 2 2 2
MIRT631374 COL4A3BP collagen type IV alpha 3 binding protein 2 2
MIRT631557 TRAF3IP2 TRAF3 interacting protein 2 2 2
MIRT631615 PCDHB11 protocadherin beta 11 2 2
MIRT631935 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT632109 SSR1 signal sequence receptor subunit 1 2 2
MIRT632168 CCL22 C-C motif chemokine ligand 22 2 2
MIRT632445 SGTB small glutamine rich tetratricopeptide repeat containing beta 2 2
MIRT632652 NAV1 neuron navigator 1 2 2
MIRT632688 MTMR10 myotubularin related protein 10 2 2
MIRT632828 IGF1 insulin like growth factor 1 2 2
MIRT632905 FRRS1 ferric chelate reductase 1 2 2
MIRT633027 DNAL1 dynein axonemal light chain 1 2 2
MIRT633379 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633440 KLLN killin, p53-regulated DNA replication inhibitor 2 2
MIRT633726 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT633832 WHAMM WAS protein homolog associated with actin, golgi membranes and microtubules 2 2
MIRT633862 ATP6V1A ATPase H+ transporting V1 subunit A 2 2
MIRT634042 NUP155 nucleoporin 155 2 2
MIRT634266 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT634374 RAP2B RAP2B, member of RAS oncogene family 2 2
MIRT634439 PDE7A phosphodiesterase 7A 2 2
MIRT634573 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT634620 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT634693 DSEL dermatan sulfate epimerase-like 2 2
MIRT634768 CD3D CD3d molecule 2 2
MIRT635024 WWTR1 WW domain containing transcription regulator 1 2 2
MIRT635384 NHLRC2 NHL repeat containing 2 2 2
MIRT635577 TTC9C tetratricopeptide repeat domain 9C 2 2
MIRT635793 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT635837 ZNF264 zinc finger protein 264 2 2
MIRT636043 ZSCAN29 zinc finger and SCAN domain containing 29 2 4
MIRT636070 ZNF280C zinc finger protein 280C 2 2
MIRT636697 ARSK arylsulfatase family member K 2 2
MIRT637438 ZNF324B zinc finger protein 324B 2 2
MIRT637582 PLD6 phospholipase D family member 6 2 2
MIRT637672 PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D 2 2
MIRT637887 SLC19A3 solute carrier family 19 member 3 2 4
MIRT638353 RBMS2 RNA binding motif single stranded interacting protein 2 2 4
MIRT638597 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT638821 CRTAP cartilage associated protein 2 2
MIRT638871 CEP97 centrosomal protein 97 2 4
MIRT639660 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT640200 TIMM50 translocase of inner mitochondrial membrane 50 2 2
MIRT641592 TNS4 tensin 4 2 2
MIRT644993 POLR2J3 RNA polymerase II subunit J3 2 2
MIRT645059 UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII 2 2
MIRT646948 UPK3BL uroplakin 3B like 1 2 2
MIRT647306 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT648300 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 4
MIRT649043 SLC1A2 solute carrier family 1 member 2 2 2
MIRT649884 SLFN12L schlafen family member 12 like 2 2
MIRT650196 DOCK7 dedicator of cytokinesis 7 2 2
MIRT654789 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT655667 NUP43 nucleoporin 43 2 2
MIRT655925 NDUFA4P1 NDUFA4, mitochondrial complex associated pseudogene 1 2 2
MIRT656433 MARCH6 membrane associated ring-CH-type finger 6 2 2
MIRT657713 GPC4 glypican 4 2 2
MIRT659302 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT659844 CAPZB capping actin protein of muscle Z-line beta subunit 2 2
MIRT660660 ANKFY1 ankyrin repeat and FYVE domain containing 1 2 2
MIRT661308 CPM carboxypeptidase M 2 2
MIRT661473 CHMP1B charged multivesicular body protein 1B 2 2
MIRT661906 EBNA1BP2 EBNA1 binding protein 2 2 2
MIRT662064 ZNF284 zinc finger protein 284 2 2
MIRT662491 ANGPT4 angiopoietin 4 2 2
MIRT662657 LRRC47 leucine rich repeat containing 47 2 2
MIRT662804 MSRB2 methionine sulfoxide reductase B2 2 2
MIRT663164 FGFR1OP FGFR1 oncogene partner 2 2
MIRT663376 ZNF770 zinc finger protein 770 2 4
MIRT663418 ZNF607 zinc finger protein 607 2 2
MIRT663990 WDR75 WD repeat domain 75 2 2
MIRT664157 APOBEC3F apolipoprotein B mRNA editing enzyme catalytic subunit 3F 2 4
MIRT664489 POLR3K RNA polymerase III subunit K 2 2
MIRT665058 CCDC77 coiled-coil domain containing 77 2 2
MIRT665080 CRIPT CXXC repeat containing interactor of PDZ3 domain 2 2
MIRT665420 WDR55 WD repeat domain 55 2 2
MIRT665716 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT665923 TBC1D19 TBC1 domain family member 19 2 4
MIRT666239 SLC38A7 solute carrier family 38 member 7 2 4
MIRT666840 PPTC7 PTC7 protein phosphatase homolog 2 2
MIRT667378 MOB1B MOB kinase activator 1B 2 2
MIRT667573 LONRF2 LON peptidase N-terminal domain and ring finger 2 2 2
MIRT667894 ING1 inhibitor of growth family member 1 2 2
MIRT667977 HECTD3 HECT domain E3 ubiquitin protein ligase 3 2 2
MIRT668197 GCNT4 glucosaminyl (N-acetyl) transferase 4, core 2 2 2
MIRT668279 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 2
MIRT668386 FAT3 FAT atypical cadherin 3 2 2
MIRT668444 FAM208A family with sequence similarity 208 member A 2 2
MIRT668998 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669180 CCNF cyclin F 2 2
MIRT669444 ATL3 atlastin GTPase 3 2 2
MIRT669661 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT669890 KIAA0754 KIAA0754 2 4
MIRT669973 SSR3 signal sequence receptor subunit 3 2 2
MIRT670153 SLC29A4 solute carrier family 29 member 4 2 2
MIRT670240 TRIM13 tripartite motif containing 13 2 2
MIRT670274 CBY3 chibby family member 3 2 2
MIRT670358 ULBP3 UL16 binding protein 3 2 4
MIRT670627 BVES blood vessel epicardial substance 2 2
MIRT670731 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670770 TRIM66 tripartite motif containing 66 2 2
MIRT670913 DESI1 desumoylating isopeptidase 1 2 2
MIRT671216 CLSTN1 calsyntenin 1 2 2
MIRT671398 ERCC6L2 ERCC excision repair 6 like 2 2 2
MIRT671427 TOX4 TOX high mobility group box family member 4 2 2
MIRT671654 TRUB2 TruB pseudouridine synthase family member 2 2 4
MIRT671702 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT672136 PLEKHH1 pleckstrin homology, MyTH4 and FERM domain containing H1 2 2
MIRT672395 SLC10A6 solute carrier family 10 member 6 2 2
MIRT672508 GGCX gamma-glutamyl carboxylase 2 2
MIRT672572 RNF24 ring finger protein 24 2 2
MIRT672789 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT673019 RBBP4 RB binding protein 4, chromatin remodeling factor 2 2
MIRT673190 C10orf76 chromosome 10 open reading frame 76 2 2
MIRT673372 ZNF124 zinc finger protein 124 2 2
MIRT673495 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT673852 CAPN7 calpain 7 2 2
MIRT673929 ZNF500 zinc finger protein 500 2 2
MIRT673986 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 2 2
MIRT674076 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674123 RPL7L1 ribosomal protein L7 like 1 2 2
MIRT674297 THAP5 THAP domain containing 5 2 2
MIRT674370 POLR3D RNA polymerase III subunit D 2 2
MIRT674641 NKRF NFKB repressing factor 2 2
MIRT674665 PLCE1 phospholipase C epsilon 1 2 2
MIRT674725 ZNF451 zinc finger protein 451 2 4
MIRT674779 NPR1 natriuretic peptide receptor 1 2 2
MIRT674889 RASSF9 Ras association domain family member 9 2 2
MIRT675017 SNX1 sorting nexin 1 2 2
MIRT675341 KLHL26 kelch like family member 26 2 2
MIRT675416 CLEC7A C-type lectin domain containing 7A 2 2
MIRT675497 HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 2 2
MIRT675615 EHD2 EH domain containing 2 2 2
MIRT675735 AHR aryl hydrocarbon receptor 2 2
MIRT675857 ATP1B4 ATPase Na+/K+ transporting family member beta 4 2 2
MIRT675990 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676213 TMEM91 transmembrane protein 91 2 2
MIRT676406 MRO maestro 2 2
MIRT677299 CPSF2 cleavage and polyadenylation specific factor 2 2 2
MIRT677387 PCNP PEST proteolytic signal containing nuclear protein 2 2
MIRT677859 ABI2 abl interactor 2 2 2
MIRT677965 ITGB3 integrin subunit beta 3 2 2
MIRT678175 CRCP CGRP receptor component 2 2
MIRT678273 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT678665 SCUBE3 signal peptide, CUB domain and EGF like domain containing 3 2 2
MIRT679003 TTC39B tetratricopeptide repeat domain 39B 2 2
MIRT679053 RMDN1 regulator of microtubule dynamics 1 2 2
MIRT679461 RHOF ras homolog family member F, filopodia associated 2 2
MIRT679513 RAB36 RAB36, member RAS oncogene family 2 2
MIRT679914 ZKSCAN3 zinc finger with KRAB and SCAN domains 3 2 2
MIRT680029 OSBPL2 oxysterol binding protein like 2 2 4
MIRT680245 NDUFA7 NADH:ubiquinone oxidoreductase subunit A7 2 2
MIRT680279 AKIP1 A-kinase interacting protein 1 2 2
MIRT680499 PRIM2 DNA primase subunit 2 2 2
MIRT680586 ZNF573 zinc finger protein 573 2 2
MIRT680629 KIAA1456 KIAA1456 2 2
MIRT680819 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT680998 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT681122 INTS7 integrator complex subunit 7 2 2
MIRT681161 IBA57 IBA57 homolog, iron-sulfur cluster assembly 2 2
MIRT681221 DUSP19 dual specificity phosphatase 19 2 2
MIRT681304 IKZF3 IKAROS family zinc finger 3 2 2
MIRT681341 BRI3BP BRI3 binding protein 2 2
MIRT681608 F2RL2 coagulation factor II thrombin receptor like 2 2 2
MIRT681779 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681892 SLC11A2 solute carrier family 11 member 2 2 2
MIRT682084 ITGA3 integrin subunit alpha 3 2 4
MIRT682139 SMS spermine synthase 2 2
MIRT682217 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682367 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682535 EXOSC2 exosome component 2 2 2
MIRT682618 COX6B1 cytochrome c oxidase subunit 6B1 2 2
MIRT683643 ZNF695 zinc finger protein 695 2 2
MIRT684008 FOLR1 folate receptor 1 2 2
MIRT684442 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684855 ZNF749 zinc finger protein 749 2 2
MIRT684956 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685044 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685095 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685382 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT685456 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT685810 SLC27A1 solute carrier family 27 member 1 2 2
MIRT685913 MOCS3 molybdenum cofactor synthesis 3 2 2
MIRT686665 TMEM120B transmembrane protein 120B 2 2
MIRT686955 SFT2D2 SFT2 domain containing 2 2 2
MIRT687118 QPCTL glutaminyl-peptide cyclotransferase like 2 2
MIRT687739 KIAA1328 KIAA1328 2 2
MIRT688063 GLUL glutamate-ammonia ligase 2 2
MIRT688191 FNIP1 folliculin interacting protein 1 2 2
MIRT688769 CDH7 cadherin 7 2 2
MIRT688979 ATP6AP1 ATPase H+ transporting accessory protein 1 2 2
MIRT689572 NUDT7 nudix hydrolase 7 2 2
MIRT689683 TMPRSS12 transmembrane protease, serine 12 2 2
MIRT689930 MANSC1 MANSC domain containing 1 2 2
MIRT690089 PNMA2 paraneoplastic Ma antigen 2 2 2
MIRT690190 C5orf45 MRN complex interacting protein 2 2
MIRT690246 CAMLG calcium modulating ligand 2 2
MIRT690411 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT690840 DSN1 DSN1 homolog, MIS12 kinetochore complex component 2 2
MIRT690889 FUT2 fucosyltransferase 2 2 2
MIRT691107 ADIPOQ adiponectin, C1Q and collagen domain containing 2 2
MIRT691229 DFNB59 pejvakin 2 2
MIRT691300 ZNF681 zinc finger protein 681 2 2
MIRT691366 GP5 glycoprotein V platelet 2 2
MIRT691797 WARS tryptophanyl-tRNA synthetase 2 2
MIRT692142 CEP104 centrosomal protein 104 2 2
MIRT692572 NCMAP non-compact myelin associated protein 2 2
MIRT692649 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT692744 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT693092 SCNM1 sodium channel modifier 1 2 2
MIRT693296 SYTL3 synaptotagmin like 3 2 2
MIRT693392 ZNF460 zinc finger protein 460 2 2
MIRT693530 ZNF708 zinc finger protein 708 2 2
MIRT693562 PIGR polymeric immunoglobulin receptor 2 2
MIRT694492 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT694722 LLGL1 LLGL1, scribble cell polarity complex component 2 2
MIRT694866 ZNF417 zinc finger protein 417 2 2
MIRT695070 ZNF17 zinc finger protein 17 2 2
MIRT695451 COX18 COX18, cytochrome c oxidase assembly factor 2 2
MIRT695724 ZNF117 zinc finger protein 117 2 2
MIRT695898 MED16 mediator complex subunit 16 2 2
MIRT696244 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT696259 TACO1 translational activator of cytochrome c oxidase I 2 2
MIRT696512 C3 complement C3 2 2
MIRT696560 TTC21B tetratricopeptide repeat domain 21B 2 2
MIRT696643 AGXT2 alanine--glyoxylate aminotransferase 2 2 2
MIRT696791 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT696819 PLLP plasmolipin 2 2
MIRT697088 GPKOW G-patch domain and KOW motifs 2 2
MIRT697153 INMT indolethylamine N-methyltransferase 2 2
MIRT697202 ZYG11A zyg-11 family member A, cell cycle regulator 2 2
MIRT697322 ZNF641 zinc finger protein 641 2 2
MIRT697578 YME1L1 YME1 like 1 ATPase 2 2
MIRT697619 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT698619 TES testin LIM domain protein 2 2
MIRT698804 STK38 serine/threonine kinase 38 2 2
MIRT698949 SPAST spastin 2 2
MIRT699083 SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 2 2
MIRT699430 SLC1A5 solute carrier family 1 member 5 2 2
MIRT699550 SIT1 signaling threshold regulating transmembrane adaptor 1 2 2
MIRT700324 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT700360 RAB33B RAB33B, member RAS oncogene family 2 2
MIRT700462 PURB purine rich element binding protein B 2 2
MIRT701677 MYADM myeloid associated differentiation marker 2 2
MIRT701757 MSL2 MSL complex subunit 2 2 2
MIRT701977 MIER3 MIER family member 3 2 2
MIRT703178 GPBP1 GC-rich promoter binding protein 1 2 2
MIRT703203 GOLGA3 golgin A3 2 2
MIRT703359 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT703425 FYTTD1 forty-two-three domain containing 1 2 2
MIRT703484 FNDC3B fibronectin type III domain containing 3B 2 2
MIRT703590 FBXO45 F-box protein 45 2 2
MIRT703806 EVI5 ecotropic viral integration site 5 2 2
MIRT703915 EPG5 ectopic P-granules autophagy protein 5 homolog 2 2
MIRT704234 DHDDS dehydrodolichyl diphosphate synthase subunit 2 2
MIRT704646 CLCC1 chloride channel CLIC like 1 2 2
MIRT705151 C11orf58 chromosome 11 open reading frame 58 2 2
MIRT705480 ASXL2 additional sex combs like 2, transcriptional regulator 2 2
MIRT705530 ARL10 ADP ribosylation factor like GTPase 10 2 2
MIRT705661 ANKRD40 ankyrin repeat domain 40 2 2
MIRT706144 ZNF674 zinc finger protein 674 2 2
MIRT706473 SNX27 sorting nexin family member 27 2 2
MIRT708254 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT708838 SCAND3 zinc finger BED-type containing 9 1 1
MIRT710437 BTNL3 butyrophilin like 3 2 2
MIRT711325 DPYSL5 dihydropyrimidinase like 5 2 2
MIRT716151 RBM48 RNA binding motif protein 48 2 2
MIRT717402 ZCCHC24 zinc finger CCHC-type containing 24 2 2
MIRT720866 ADCY5 adenylate cyclase 5 2 2
MIRT722226 ZNF503 zinc finger protein 503 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-1273h-5p Paclitaxel 36314 NSC125973 approved sensitive High Ovarian Cancer cell line (SKOV3)
hsa-miR-1273h-5p Tripterygium wilfordii Hook F resistant tissue
hsa-miR-1273h-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (MGC-803)

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