pre-miRNA Information
pre-miRNA hsa-mir-4419b   
Genomic Coordinates chr12: 128244506 - 128244573
Description Homo sapiens miR-4419b stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4419b
Sequence 42| GAGGCUGAAGGAAGAUGG |59
Evidence Experimental
Experiments Illumina
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol MRPS16   
Synonyms CGI-132, COXPD2, MRP-S16, RPMS16
Description mitochondrial ribosomal protein S16
Transcript NM_016065   
Expression
Putative miRNA Targets on MRPS16
3'UTR of MRPS16
(miRNA target sites are highlighted)
>MRPS16|NM_016065|3'UTR
   1 ATGAGCTGACTTTAGTGAGCATAGCAGTGGGAACAAGGTCAAGGTCCTTTTGAAACACTGCAGCGATCTTAATTTTGTTA
  81 GATTTGGAGTTCAATAAATGGAGTATCCTGAGTTGCCCTTGCTCTTCTGGCCTGGCCTGCACAGGGCCCAGGGAGAGATT
 161 TGTTCTTGTGTGACTTAGAGCTGGGTGTGGGTACTAATTAGCTTTTTTCGACTTTGTCTTGGGATAGACAGTGGCTATGG
 241 GAGGATTGGACTTTTGAGTTGGGCTCTGGGTCTCTTGGACAACTTTACAATTTACTGGCTTCCAAGACTTCCTGCTTCAA
 321 AACCCCCAGCCAGACTATTCATGGCCCATTCAGATCTTCATGTTCATCCCACAAGTGCAAGAACAGTTAACCTTTCTTAA
 401 TTGATTTTTGTAATTGGAGGTTTATATTGTCTTGCCTAATGCATATTCTCTTTTTTTTTTTTTTTTTGAGACGGAGTCTT
 481 GTTCTGTTGCCAGGCTGGAGTGCGGTGGTGCAATCTCAGCTCACTGCAATCTCCACCTCCTGGGTTCAAGAGGTTCTCCT
 561 GCCTCAGCCTCCTGAGTAGCCGGGGAGCTACAAGCATGCACCACCACACCCAGCTAATTTTTTTTTTTTTTTTGAGAGGA
 641 GTCTCGCTCTGTCGCCCAGGCTTGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCTGTCTCCTGGGTTCATGCCAT
 721 TCTCCTGCTTCAGCCTCCCGAGTAGTCCCAGGAGTAGCTGGGACTACAGGTGCCCACCACCACACCCAGCTAATTTTTTT
 801 GTATTTTTAGTAGAGATGGGGTTTCACCATGTTATCCAGGATGGTTTTGATCTCCTGACCTCGTGATCCGCCCGCCTTGG
 881 CCTCCCAAAAGTGCTGGGATTATAGGCGTGAGCCACCGCCCGGGCAAATTTTTGTATTTTTAGTAGAGATGGGGTTTCAC
 961 CGTGTTGGCCAGGATGGTCTCAATCTGACCTTGTGATCTGCCCACCTCGGCCTCCCAAAGTGCTAGGATTACTGGCGTGA
1041 GCCACCACTCCTAGCCTTAATGCATATTCTTAAATATACAAAGGTAGATTTGTTATGAAAATTGCTTTGGGGCTCTAATA
1121 ACCTACCTTTTAAGAATGAGAAACTGCTGGGCTTAAGGGAGTTCAGTATGAATCAAGATTGAACCATTCAAATGTGGCTG
1201 TGATTTCTGCATATATCATAGATGGGATCCTTCTGAGAATACTGGAATAGGGAATTAGGACACCAAGCCAATTCAGCTGT
1281 GAACCTTATTCTTGTACTTTTCTTTCTTGCTGGTAATTTTATGGAGCAGGTTAAGAAGGCTGCTCTGTGTTAGGATAAAC
1361 TGTATACCAATAATGTTGACAACCTGTAATGAGTGTTGCATTTTACTTCTTGTATCTTTTCCTTCCTACCTTGATGCCAG
1441 TAATCTATAAGGGATCTTTATAGTTTGAATGTATTTGAATAACTTCAGTATACTTTAGTTCTACTTTTTTATTTGACTCA
1521 CAACCATTCTTAGGTCTCAAGTATTCCCATGTGTTTTAAAAGCCTGAAGTCAGTGAGATGAAATTCAACATCAAGAATTT
1601 GAAGTAACTTGTAAGGAAAAATAATATAAAGATACCATTGGGGCAGTGGCTCACACCTGTAATCTCAGCACTTTGGGAGG
1681 CTGAGGTGGAAGGATCACTTGAAGCCAGAGTTTGAGACCAGCCTGTGCAACACAGCAAGACCCCGTCTCTACAAAAACTT
1761 AAAAAATTAGCTGGCTGTGGTGTTGCTCACCCATAGTTCCAGCTACTCGGGAAGCTGAGGCAGTAAGATCACTTGAGCCC
1841 AGGAGGCCGATGCTGCAGTGAACTGTGATTGTTCCACTACAGTCCAGCCTGGGTGACAGAGAAAAGAAAAAGAAAACATT
1921 ACATAATTTGGCTAGAGCATAATAATTTGATTTTCTGGTTTTTGAAAATTTGAGTTGCAATAAAAGGATATTTCAGTGTG
2001 CGATTTCAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' gguAGAAGGAAGUCGGAg 5'
             || | ||||||||| 
Target 5' ttcTCCTGCTTCAGCCTc 3'
720 - 737 159.00 -18.40
2
miRNA  3' ggUAGAAGGA---AGUCGGAg 5'
            :|: ||||   ||||||| 
Target 5' agGTTCTCCTGCCTCAGCCTc 3'
551 - 571 152.00 -17.80
3
miRNA  3' ggUAGAAG---GAAGUCGGAg 5'
            |||| |   | ||:|||| 
Target 5' tgATCTGCCCACCTCGGCCTc 3'
994 - 1014 136.00 -16.40
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
300712 451 ClinVar
300704 634 ClinVar
300699 857 ClinVar
300694 1294 ClinVar
300690 1503 ClinVar
COSN30456173 46 COSMIC
COSN30456197 47 COSMIC
COSN30498736 64 COSMIC
COSN31539865 99 COSMIC
COSN22599469 144 COSMIC
COSN31524909 210 COSMIC
COSN7068209 396 COSMIC
COSN1500243 423 COSMIC
COSN5883398 1135 COSMIC
COSN30499819 1179 COSMIC
COSN30122968 1306 COSMIC
COSN30289997 1383 COSMIC
COSN25780241 1411 COSMIC
COSN25778500 1413 COSMIC
COSM8915130 1559 COSMIC
COSN21538071 1595 COSMIC
COSN30114063 1595 COSMIC
COSN30123165 1633 COSMIC
COSN28565045 1645 COSMIC
COSN30667868 1665 COSMIC
COSN1122343 1670 COSMIC
COSN20046248 1681 COSMIC
COSN28853465 1707 COSMIC
COSN31591003 1745 COSMIC
COSN30128131 1839 COSMIC
COSN28568201 1879 COSMIC
COSN28857495 1899 COSMIC
COSN30129020 1912 COSMIC
COSN28201843 1996 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1457791352 2 dbSNP
rs768838682 5 dbSNP
rs1467603217 6 dbSNP
rs377271845 11 dbSNP
rs7075371 13 dbSNP
rs1208512036 21 dbSNP
rs778863355 22 dbSNP
rs1266613233 24 dbSNP
rs952519857 27 dbSNP
rs753328308 28 dbSNP
rs770692603 29 dbSNP
rs1311701212 37 dbSNP
rs1165332331 39 dbSNP
rs749034956 41 dbSNP
rs777576361 47 dbSNP
rs1163004038 61 dbSNP
rs886047198 65 dbSNP
rs973085337 76 dbSNP
rs539530542 86 dbSNP
rs1330653744 88 dbSNP
rs1035500895 94 dbSNP
rs536907771 99 dbSNP
rs923184891 103 dbSNP
rs1378113971 108 dbSNP
rs1231108446 110 dbSNP
rs971949423 118 dbSNP
rs886047197 121 dbSNP
rs1197444438 122 dbSNP
rs1272973164 131 dbSNP
rs961380322 134 dbSNP
rs1190160614 145 dbSNP
rs1238442676 153 dbSNP
rs1475044842 155 dbSNP
rs1186088811 158 dbSNP
rs1016037718 167 dbSNP
rs970787503 168 dbSNP
rs1289993899 170 dbSNP
rs766015986 174 dbSNP
rs1416128107 178 dbSNP
rs565826277 181 dbSNP
rs1326833407 190 dbSNP
rs1358367287 190 dbSNP
rs1480701692 193 dbSNP
rs1388399450 206 dbSNP
rs952943534 209 dbSNP
rs1237056976 210 dbSNP
rs766114937 212 dbSNP
rs1340740383 216 dbSNP
rs547392259 217 dbSNP
rs893825697 218 dbSNP
rs1267920469 223 dbSNP
rs1346452919 226 dbSNP
rs1391588294 229 dbSNP
rs1002332895 230 dbSNP
rs1053771859 241 dbSNP
rs1485580302 243 dbSNP
rs906687377 245 dbSNP
rs999795130 246 dbSNP
rs1009803757 247 dbSNP
rs1192686205 248 dbSNP
rs892700699 259 dbSNP
rs1173105209 274 dbSNP
rs181757719 280 dbSNP
rs561738482 281 dbSNP
rs1299785421 285 dbSNP
rs550177586 286 dbSNP
rs868175291 295 dbSNP
rs1360877505 296 dbSNP
rs1399044533 302 dbSNP
rs532037332 306 dbSNP
rs944229134 309 dbSNP
rs1332328878 311 dbSNP
rs936342266 316 dbSNP
rs190204061 323 dbSNP
rs1050130920 337 dbSNP
rs1049972935 340 dbSNP
rs931059294 341 dbSNP
rs1288635542 344 dbSNP
rs1362400501 353 dbSNP
rs1204781295 369 dbSNP
rs919604644 381 dbSNP
rs923070374 383 dbSNP
rs186383176 384 dbSNP
rs1394446701 397 dbSNP
rs939948341 401 dbSNP
rs1253082711 410 dbSNP
rs928515017 410 dbSNP
rs1212456175 416 dbSNP
rs1466736167 442 dbSNP
rs11598278 444 dbSNP
rs201473932 448 dbSNP
rs1223975125 450 dbSNP
rs886047196 451 dbSNP
rs1392424675 452 dbSNP
rs75554141 452 dbSNP
rs1322285839 453 dbSNP
rs1368092845 453 dbSNP
rs1439382662 454 dbSNP
rs1277519416 458 dbSNP
rs1354885092 460 dbSNP
rs984539114 466 dbSNP
rs1371569848 467 dbSNP
rs113258240 468 dbSNP
rs1180443881 468 dbSNP
rs1210608478 468 dbSNP
rs1252483489 468 dbSNP
rs1358699301 468 dbSNP
rs892096228 468 dbSNP
rs1325123670 469 dbSNP
rs551135342 470 dbSNP
rs567157597 470 dbSNP
rs886047195 472 dbSNP
rs12249492 473 dbSNP
rs936343274 475 dbSNP
rs1033745206 486 dbSNP
rs560241550 502 dbSNP
rs1174607415 503 dbSNP
rs1002216813 504 dbSNP
rs1466683087 508 dbSNP
rs1334021369 511 dbSNP
rs970774311 517 dbSNP
rs1025122157 520 dbSNP
rs1009689630 522 dbSNP
rs1342595528 523 dbSNP
rs12257322 529 dbSNP
rs1272716225 539 dbSNP
rs772787486 540 dbSNP
rs1332840222 545 dbSNP
rs1200596566 553 dbSNP
rs1054005884 559 dbSNP
rs1480253644 561 dbSNP
rs1175365290 564 dbSNP
rs886047194 566 dbSNP
rs11000563 567 dbSNP
rs1424111179 578 dbSNP
rs574459836 581 dbSNP
rs1000941780 582 dbSNP
rs888762048 587 dbSNP
rs886047193 593 dbSNP
rs1050183378 599 dbSNP
rs12257264 600 dbSNP
rs1296885916 604 dbSNP
rs1404816298 606 dbSNP
rs1415767361 608 dbSNP
rs1292975665 610 dbSNP
rs1310660946 615 dbSNP
rs1353758366 634 dbSNP
rs1389414487 634 dbSNP
rs555061429 634 dbSNP
rs886047192 634 dbSNP
rs1216106333 635 dbSNP
rs901573747 639 dbSNP
rs145765900 642 dbSNP
rs1483490425 642 dbSNP
rs1281904196 645 dbSNP
rs940503544 645 dbSNP
rs1193873327 646 dbSNP
rs909128044 648 dbSNP
rs1426160314 653 dbSNP
rs576324784 654 dbSNP
rs1379875055 661 dbSNP
rs1435769692 663 dbSNP
rs367784695 669 dbSNP
rs931319367 675 dbSNP
rs1302632886 676 dbSNP
rs926655352 677 dbSNP
rs868814192 678 dbSNP
rs374499787 683 dbSNP
rs1367468308 684 dbSNP
rs1348465008 688 dbSNP
rs1233358244 696 dbSNP
rs1277953584 701 dbSNP
rs970826554 701 dbSNP
rs1216899696 702 dbSNP
rs1241143467 703 dbSNP
rs1270802325 703 dbSNP
rs866967459 710 dbSNP
rs1192394986 713 dbSNP
rs1270151030 715 dbSNP
rs1455100878 718 dbSNP
rs1173515445 728 dbSNP
rs981321053 729 dbSNP
rs1160187412 739 dbSNP
rs886047191 740 dbSNP
rs886047190 741 dbSNP
rs886047189 742 dbSNP
rs969897187 746 dbSNP
rs1022781208 748 dbSNP
rs1440123583 752 dbSNP
rs991333622 753 dbSNP
rs1435799219 755 dbSNP
rs958121983 767 dbSNP
rs539672097 768 dbSNP
rs1283167282 773 dbSNP
rs1314737128 777 dbSNP
rs1032766101 778 dbSNP
rs1253114286 780 dbSNP
rs1432130469 786 dbSNP
rs181174969 793 dbSNP
rs1442009816 794 dbSNP
rs1178110544 801 dbSNP
rs1407593830 801 dbSNP
rs1399198809 802 dbSNP
rs1186536146 803 dbSNP
rs776839878 804 dbSNP
rs1474788394 811 dbSNP
rs1395326785 814 dbSNP
rs1460972921 815 dbSNP
rs1378982013 817 dbSNP
rs1442715937 820 dbSNP
rs1278757759 825 dbSNP
rs1370853039 829 dbSNP
rs1240068891 830 dbSNP
rs902515132 830 dbSNP
rs1273365325 834 dbSNP
rs769094094 835 dbSNP
rs1271877924 847 dbSNP
rs1440038227 848 dbSNP
rs886047188 857 dbSNP
rs1008472074 858 dbSNP
rs1468865944 860 dbSNP
rs1279280335 862 dbSNP
rs1208675924 863 dbSNP
rs189233953 863 dbSNP
rs535564295 868 dbSNP
rs1049899011 869 dbSNP
rs372270481 870 dbSNP
rs1352554878 873 dbSNP
rs1449942035 874 dbSNP
rs1028686005 877 dbSNP
rs1354399474 878 dbSNP
rs1230977886 888 dbSNP
rs1339429772 891 dbSNP
rs1359943489 891 dbSNP
rs1215673804 892 dbSNP
rs1272904791 895 dbSNP
rs898209437 896 dbSNP
rs1286212074 902 dbSNP
rs997179677 903 dbSNP
rs1355264316 907 dbSNP
rs1485478084 908 dbSNP
rs567915175 913 dbSNP
rs1374867086 915 dbSNP
rs1037107508 917 dbSNP
rs1417293864 918 dbSNP
rs529388897 918 dbSNP
rs549760990 921 dbSNP
rs561890630 922 dbSNP
rs1355689723 923 dbSNP
rs183739521 925 dbSNP
rs887591740 925 dbSNP
rs1326522411 930 dbSNP
rs1408904732 935 dbSNP
rs1226050768 942 dbSNP
rs11538570 945 dbSNP
rs746084425 950 dbSNP
rs1416745935 952 dbSNP
rs1237081225 961 dbSNP
rs1281527651 962 dbSNP
rs937298262 967 dbSNP
rs1347522491 971 dbSNP
rs989967984 973 dbSNP
rs1209011200 974 dbSNP
rs1376186962 977 dbSNP
rs112218454 979 dbSNP
rs1447725532 983 dbSNP
rs1192525643 990 dbSNP
rs1240337887 991 dbSNP
rs1475307906 992 dbSNP
rs1256544263 1000 dbSNP
rs1185457418 1008 dbSNP
rs552333359 1009 dbSNP
rs1032469425 1015 dbSNP
rs978165954 1016 dbSNP
rs550900634 1017 dbSNP
rs761233663 1018 dbSNP
rs966729992 1023 dbSNP
rs1483904236 1029 dbSNP
rs1174142637 1036 dbSNP
rs1233451324 1037 dbSNP
rs1019608736 1046 dbSNP
rs1203692429 1047 dbSNP
rs1305864593 1049 dbSNP
rs1385186975 1053 dbSNP
rs980773582 1054 dbSNP
rs1315638370 1059 dbSNP
rs1008503400 1061 dbSNP
rs890015289 1062 dbSNP
rs1028916777 1067 dbSNP
rs530487067 1074 dbSNP
rs898656911 1076 dbSNP
rs1036775075 1085 dbSNP
rs1304729588 1087 dbSNP
rs939758428 1088 dbSNP
rs1334371868 1092 dbSNP
rs906898745 1094 dbSNP
rs189498545 1096 dbSNP
rs184662992 1105 dbSNP
rs1204728751 1110 dbSNP
rs957105376 1113 dbSNP
rs1032538123 1114 dbSNP
rs12761045 1124 dbSNP
rs758213060 1126 dbSNP
rs562729930 1127 dbSNP
rs979989109 1138 dbSNP
rs1194201707 1147 dbSNP
rs878877218 1149 dbSNP
rs79140810 1150 dbSNP
rs915793465 1151 dbSNP
rs1452645744 1163 dbSNP
rs1156377115 1164 dbSNP
rs368863086 1164 dbSNP
rs997189298 1179 dbSNP
rs1327239028 1180 dbSNP
rs901487354 1187 dbSNP
rs1015103243 1206 dbSNP
rs1004664884 1214 dbSNP
rs1054779957 1216 dbSNP
rs887506199 1219 dbSNP
rs1461650099 1225 dbSNP
rs1416787452 1226 dbSNP
rs1048927862 1267 dbSNP
rs935886020 1271 dbSNP
rs1001767570 1272 dbSNP
rs924428210 1276 dbSNP
rs1337121403 1278 dbSNP
rs748018108 1282 dbSNP
rs905795529 1293 dbSNP
rs558115305 1294 dbSNP
rs767465725 1294 dbSNP
rs778852449 1295 dbSNP
rs986764191 1296 dbSNP
rs1418227777 1304 dbSNP
rs1052849573 1306 dbSNP
rs546133009 1310 dbSNP
rs935450280 1314 dbSNP
rs572240245 1323 dbSNP
rs979657275 1333 dbSNP
rs1391593927 1336 dbSNP
rs780707061 1349 dbSNP
rs954442938 1353 dbSNP
rs1028613252 1364 dbSNP
rs199860739 1364 dbSNP
rs879434906 1376 dbSNP
rs564745765 1383 dbSNP
rs1397674092 1384 dbSNP
rs953488319 1386 dbSNP
rs139703406 1391 dbSNP
rs192915597 1408 dbSNP
rs868436163 1412 dbSNP
rs1292780386 1421 dbSNP
rs1332682706 1435 dbSNP
rs1229531248 1439 dbSNP
rs976305218 1442 dbSNP
rs1015693258 1445 dbSNP
rs568190179 1446 dbSNP
rs1259244778 1447 dbSNP
rs1003935502 1448 dbSNP
rs1186736383 1454 dbSNP
rs188485257 1456 dbSNP
rs1173240620 1462 dbSNP
rs1374141218 1463 dbSNP
rs1321686144 1486 dbSNP
rs1014616438 1490 dbSNP
rs1306585080 1496 dbSNP
rs1388381098 1501 dbSNP
rs2018198 1503 dbSNP
rs770176974 1506 dbSNP
rs56788336 1511 dbSNP
rs1012625105 1515 dbSNP
rs571041393 1517 dbSNP
rs1158821667 1521 dbSNP
rs1283227404 1523 dbSNP
rs1306827547 1523 dbSNP
rs1477497847 1525 dbSNP
rs1225091099 1531 dbSNP
rs1282240727 1538 dbSNP
rs1348245064 1540 dbSNP
rs780557490 1544 dbSNP
rs1254948880 1547 dbSNP
rs1375362467 1550 dbSNP
rs1200364283 1551 dbSNP
rs1433325297 1552 dbSNP
rs375180473 1557 dbSNP
rs1268639556 1560 dbSNP
rs1001325715 1565 dbSNP
rs1216573860 1568 dbSNP
rs1487489991 1571 dbSNP
rs1054409925 1578 dbSNP
rs776907634 1578 dbSNP
rs1288634214 1580 dbSNP
rs935898905 1587 dbSNP
rs905680522 1589 dbSNP
rs1217548578 1590 dbSNP
rs924457580 1595 dbSNP
rs1045636410 1598 dbSNP
rs1435711521 1605 dbSNP
rs528001799 1625 dbSNP
rs566678967 1626 dbSNP
rs548413376 1627 dbSNP
rs144193002 1638 dbSNP
rs563025614 1645 dbSNP
rs1160780507 1652 dbSNP
rs1054858 1655 dbSNP
rs891686375 1674 dbSNP
rs1361311182 1675 dbSNP
rs912610836 1679 dbSNP
rs987285707 1680 dbSNP
rs1158033387 1682 dbSNP
rs1052484188 1687 dbSNP
rs36013827 1687 dbSNP
rs954104789 1704 dbSNP
rs1305461514 1711 dbSNP
rs935319926 1716 dbSNP
rs568271661 1727 dbSNP
rs755618712 1731 dbSNP
rs1133529 1734 dbSNP
rs1276118305 1735 dbSNP
rs750083387 1736 dbSNP
rs1318376023 1742 dbSNP
rs1216010457 1743 dbSNP
rs1194153489 1744 dbSNP
rs184876174 1745 dbSNP
rs925395582 1750 dbSNP
rs1187290121 1752 dbSNP
rs11538573 1754 dbSNP
rs1133537 1755 dbSNP
rs886047187 1761 dbSNP
rs1133539 1766 dbSNP
rs1255436891 1768 dbSNP
rs1133541 1769 dbSNP
rs767133959 1772 dbSNP
rs1207150375 1777 dbSNP
rs761539395 1780 dbSNP
rs1133542 1793 dbSNP
rs1071674 1795 dbSNP
rs1423444363 1796 dbSNP
rs1133544 1805 dbSNP
rs974372633 1808 dbSNP
rs963262473 1809 dbSNP
rs1133548 1818 dbSNP
rs1344699024 1822 dbSNP
rs1260516939 1823 dbSNP
rs1015727218 1825 dbSNP
rs1291565943 1835 dbSNP
rs922125809 1842 dbSNP
rs1273366879 1847 dbSNP
rs532500193 1848 dbSNP
rs754586403 1849 dbSNP
rs752088228 1852 dbSNP
rs1341433825 1853 dbSNP
rs1439963470 1857 dbSNP
rs1398091636 1858 dbSNP
rs886047186 1860 dbSNP
rs1362154957 1863 dbSNP
rs1298583634 1873 dbSNP
rs774631216 1874 dbSNP
rs1375166764 1877 dbSNP
rs766940985 1878 dbSNP
rs1133556 1879 dbSNP
rs763581354 1880 dbSNP
rs1224003530 1884 dbSNP
rs1024043807 1887 dbSNP
rs370316277 1889 dbSNP
rs1013069901 1891 dbSNP
rs1214982151 1892 dbSNP
rs1265713044 1899 dbSNP
rs770856835 1903 dbSNP
rs908113380 1904 dbSNP
rs983146237 1906 dbSNP
rs750746764 1909 dbSNP
rs1202443894 1912 dbSNP
rs1345744183 1913 dbSNP
rs1257514292 1922 dbSNP
rs1216647425 1923 dbSNP
rs1342286765 1929 dbSNP
rs894165371 1936 dbSNP
rs1471329311 1940 dbSNP
rs1300548230 1941 dbSNP
rs1407529192 1944 dbSNP
rs1471676588 1945 dbSNP
rs1054505227 1947 dbSNP
rs1383578730 1947 dbSNP
rs951761867 1954 dbSNP
rs370383392 1957 dbSNP
rs1000131840 1961 dbSNP
rs546070519 1962 dbSNP
rs903069504 1963 dbSNP
rs1362296402 1968 dbSNP
rs1001211111 1975 dbSNP
rs1041574914 1978 dbSNP
rs192848708 2001 dbSNP
rs890285172 2002 dbSNP
rs1377025765 2004 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084064. RNA binding protein: AGO2. Condition:CLIP_noemetine_AbnovaAb HITS-CLIP data was present in GSM1084079. RNA binding protein: AGO2. Condition:CLIP_hippuristanol_rep2_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ggUAGAAGGA---AGUCGGAg 5'
            :|: ||||   ||||||| 
Target 5' agGUUCUCCUGCCUCAGCCUc 3'
12 - 32
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM4903833
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_a
Location of target site NM_016065 | 3UTR | CAAGCUCUGUCUCCUGGGUUCAUGCCAUUCUCCUGCUUCAGCCUCCCGAGUAGUCCCAGGAGUAGCUGGGACUACAGGUGCCCACCACCACACCCAGCUAAUUUUUUUGUAUUUUUAGUAGAGAUGGGGUUUCACCAUGUUAUCCAGGAUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903834
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_b
Location of target site NM_016065 | 3UTR | AAGCUCUGUCUCCUGGGUUCAUGCCAUUCUCCUGCUUCAGCCUCCCGAGUAGUCCCAGGAGUAGCUGGGACUACAGGUGCCCACCACCACACCCAGCUAAUUUUUUUGUAUUUUUAGUAGAGAUGGGGUUUCACCAUGUUAUCCAGGAUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM4903835
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_c
Location of target site NM_016065 | 3UTR | GGUUCAUGCCAUUCUCCUGCUUCAGCCUCCCGAGUAGUCCCAGGAGUAGCUGGGACUACAGGUGCCCACCACCACACCCAGCUAAUUUUUUUGUAUUUUUAGUAGAGAUGGGGUUUCACC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM4903836
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_a
Location of target site NM_016065 | 3UTR | AGCUCUGUCUCCUGGGUUCAUGCCAUUCUCCUGCUUCAGCCUCCCGAGUAGUCCCAGGAGUAGCUGGGACUACAGGUGCCCACCACCACACCCAGCUAAUUUUUUUGUAUUUUUAGUAGAGAUGGGGUUUCACC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 5 for dataset GSM4903837
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_b
Location of target site NM_016065 | 3UTR | UUUGAGAGGAGUCUCGCUCUGUCGCCCAGGCUUGAGUGCAGUGGCGCGAUCUCGGCUCACUGCAAGCUCUGUCUCCUGGGUUCAUGCCAUUCUCCUGCUUCAGCCUCCCGAGUAGUCCCAGGAGUAGCUGGGACUACAGGUGCCCACCACCACACCCAGCUAAUUUUUUUGUAUUUUUAGUAGAGAUGGGGUUUCACCAUGU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 6 for dataset GSM4903838
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_c
Location of target site NM_016065 | 3UTR | GUCUCCUGGGUUCAUGCCAUUCUCCUGCUUCAGCCUCCCGAGUAGUCCCAGGAGUAGCUGGGACUACAGGUGCCCACCACCACACCCAGCUAAUUUUUUUGUAUUUUUAGUAGAGAUGGGGUUUCACCAUGUUAUCCAGGAUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 7 for dataset GSM1084064
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noemetine_AbnovaAb
Location of target site ENST00000372945.3 | 3UTR | AAGAGGUUCUCCUGCCUCAGCCUCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 8 for dataset GSM1084079
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_hippuristanol_rep2_AbnovaAb
Location of target site ENST00000372945.3 | 3UTR | CUGGGUUCAAGAGGUUCUCCUGCCUCAGCCUCCUGAGU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
390 hsa-miR-4419b Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT061343 WEE1 WEE1 G2 checkpoint kinase 2 4
MIRT072743 GLCE glucuronic acid epimerase 2 2
MIRT180549 TXNIP thioredoxin interacting protein 2 2
MIRT186147 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT271044 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT334761 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 6
MIRT443279 TSPAN15 tetraspanin 15 2 2
MIRT447047 ZNF439 zinc finger protein 439 2 2
MIRT447351 KIF6 kinesin family member 6 2 2
MIRT448925 CKS1B CDC28 protein kinase regulatory subunit 1B 2 2
MIRT452899 PSD4 pleckstrin and Sec7 domain containing 4 2 2
MIRT453087 SUMF2 sulfatase modifying factor 2 2 2
MIRT454071 SLC35E3 solute carrier family 35 member E3 2 2
MIRT456216 LIX1L limb and CNS expressed 1 like 2 6
MIRT456951 LRP10 LDL receptor related protein 10 2 2
MIRT458025 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT459999 RFT1 RFT1 homolog 2 2
MIRT460046 CDCP1 CUB domain containing protein 1 2 2
MIRT460982 STK17B serine/threonine kinase 17b 2 2
MIRT464405 URM1 ubiquitin related modifier 1 2 2
MIRT466256 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 2
MIRT466536 TBXA2R thromboxane A2 receptor 2 2
MIRT470922 PLD5 phospholipase D family member 5 2 8
MIRT472835 MTMR10 myotubularin related protein 10 2 6
MIRT473352 MEMO1 mediator of cell motility 1 2 2
MIRT475504 HSP90B1 heat shock protein 90 beta family member 1 2 2
MIRT478862 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT480898 BCL9L B-cell CLL/lymphoma 9 like 2 2
MIRT482686 NXN nucleoredoxin 2 4
MIRT484128 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT486172 TLE3 transducin like enhancer of split 3 2 4
MIRT486539 CLCN7 chloride voltage-gated channel 7 2 2
MIRT486588 ZNF619 zinc finger protein 619 2 2
MIRT495475 ALDOA aldolase, fructose-bisphosphate A 2 2
MIRT495536 TXNRD2 thioredoxin reductase 2 2 2
MIRT495566 UNC5C unc-5 netrin receptor C 2 2
MIRT495719 PADI1 peptidyl arginine deiminase 1 2 2
MIRT495890 CLOCK clock circadian regulator 2 2
MIRT495932 SLC7A5P2 solute carrier family 7 member 5 pseudogene 2 2 2
MIRT496026 ZBED3 zinc finger BED-type containing 3 2 2
MIRT496216 PAX6 paired box 6 2 2
MIRT496349 VAMP1 vesicle associated membrane protein 1 2 2
MIRT496354 PPY pancreatic polypeptide 2 2
MIRT496400 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT496416 PARVB parvin beta 2 2
MIRT496458 N6AMT1 N-6 adenine-specific DNA methyltransferase 1 2 2
MIRT496519 GINS2 GINS complex subunit 2 2 2
MIRT496562 SLC39A9 solute carrier family 39 member 9 2 2
MIRT498605 KRT8 keratin 8 2 2
MIRT503434 SLC25A45 solute carrier family 25 member 45 2 6
MIRT503573 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT503847 ATP13A4 ATPase 13A4 2 4
MIRT504247 LHPP phospholysine phosphohistidine inorganic pyrophosphate phosphatase 2 4
MIRT505606 SLC35F1 solute carrier family 35 member F1 2 2
MIRT507749 CERS2 ceramide synthase 2 2 4
MIRT508411 C1orf210 chromosome 1 open reading frame 210 2 6
MIRT508508 RSRC1 arginine and serine rich coiled-coil 1 2 6
MIRT508944 AK4 adenylate kinase 4 2 4
MIRT509460 ZNF587 zinc finger protein 587 2 6
MIRT509862 ZNF641 zinc finger protein 641 2 4
MIRT511397 IKZF3 IKAROS family zinc finger 3 2 6
MIRT512517 BTBD19 BTB domain containing 19 2 2
MIRT513507 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 2 6
MIRT514155 TMEM145 transmembrane protein 145 2 4
MIRT514486 SLPI secretory leukocyte peptidase inhibitor 2 4
MIRT514521 SHISA9 shisa family member 9 2 2
MIRT514970 KLLN killin, p53-regulated DNA replication inhibitor 2 4
MIRT515030 IRAK4 interleukin 1 receptor associated kinase 4 2 6
MIRT515963 C9orf156 tRNA methyltransferase O 2 2
MIRT516092 ZBTB8OS zinc finger and BTB domain containing 8 opposite strand 2 4
MIRT517223 PRIM1 DNA primase subunit 1 2 4
MIRT517459 PEX26 peroxisomal biogenesis factor 26 2 4
MIRT517790 EFCAB11 EF-hand calcium binding domain 11 2 2
MIRT517979 DSCR3 DSCR3 arrestin fold containing 2 2
MIRT519458 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT519599 ZNF805 zinc finger protein 805 2 2
MIRT520339 UBXN2A UBX domain protein 2A 2 2
MIRT521345 RPP14 ribonuclease P/MRP subunit p14 2 2
MIRT521571 PTPLB 3-hydroxyacyl-CoA dehydratase 2 1 1
MIRT523382 GSG2 histone H3 associated protein kinase 2 8
MIRT524106 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT524886 ARHGAP11A Rho GTPase activating protein 11A 2 4
MIRT528772 CD1D CD1d molecule 2 2
MIRT530665 TRIM56 tripartite motif containing 56 2 2
MIRT531107 PEX13 peroxisomal biogenesis factor 13 2 2
MIRT531575 ILDR1 immunoglobulin like domain containing receptor 1 2 2
MIRT535173 PLEKHB2 pleckstrin homology domain containing B2 2 4
MIRT544168 HEYL hes related family bHLH transcription factor with YRPW motif-like 2 2
MIRT550582 SLC2A5 solute carrier family 2 member 5 2 2
MIRT551039 GDE1 glycerophosphodiester phosphodiesterase 1 2 4
MIRT551295 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT551339 MRE11A MRE11 homolog, double strand break repair nuclease 2 2
MIRT552092 SLFN12L schlafen family member 12 like 2 6
MIRT555403 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT557087 HOXB3 homeobox B3 2 2
MIRT559388 ATP11C ATPase phospholipid transporting 11C 2 2
MIRT560305 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT561028 LIN7C lin-7 homolog C, crumbs cell polarity complex component 2 2
MIRT562460 COX6B1 cytochrome c oxidase subunit 6B1 2 4
MIRT562982 PARK7 Parkinsonism associated deglycase 2 2
MIRT563548 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT564412 EMILIN2 elastin microfibril interfacer 2 2 4
MIRT569437 PCGF3 polycomb group ring finger 3 2 2
MIRT572097 EXOC8 exocyst complex component 8 2 2
MIRT575571 Cd99 CD99 antigen 2 2
MIRT575789 Tnfrsf10b tumor necrosis factor receptor superfamily, member 10b 2 2
MIRT576975 Lmtk2 lemur tyrosine kinase 2 2 2
MIRT610864 ARSA arylsulfatase A 2 2
MIRT614061 NTPCR nucleoside-triphosphatase, cancer-related 2 2
MIRT614141 THAP1 THAP domain containing 1 2 6
MIRT615235 BROX BRO1 domain and CAAX motif containing 2 2
MIRT617429 ANP32E acidic nuclear phosphoprotein 32 family member E 2 4
MIRT618882 MBL2 mannose binding lectin 2 2 2
MIRT618984 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619196 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620323 AQP6 aquaporin 6 2 2
MIRT621960 STX7 syntaxin 7 2 2
MIRT622057 SSBP2 single stranded DNA binding protein 2 2 2
MIRT624930 FBXW2 F-box and WD repeat domain containing 2 2 2
MIRT624986 ZNF665 zinc finger protein 665 2 4
MIRT625463 ZNF681 zinc finger protein 681 2 4
MIRT625497 SMAD9 SMAD family member 9 2 2
MIRT625599 KLHL23 kelch like family member 23 2 2
MIRT625668 C2orf48 chromosome 2 open reading frame 48 2 2
MIRT625888 INADL PATJ, crumbs cell polarity complex component 2 2
MIRT626161 NFYA nuclear transcription factor Y subunit alpha 2 2
MIRT626238 ZNF749 zinc finger protein 749 2 2
MIRT626631 SLC30A6 solute carrier family 30 member 6 2 2
MIRT626994 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627898 OLFML2A olfactomedin like 2A 2 2
MIRT627988 NDRG3 NDRG family member 3 2 2
MIRT628324 CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 2 2
MIRT628549 ZNF701 zinc finger protein 701 2 2
MIRT629464 WIZ widely interspaced zinc finger motifs 2 2
MIRT630527 BAZ2A bromodomain adjacent to zinc finger domain 2A 2 2
MIRT631487 KLHL21 kelch like family member 21 2 2
MIRT631957 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT632178 CCL22 C-C motif chemokine ligand 22 2 2
MIRT632282 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT632321 TMEM185B transmembrane protein 185B 2 2
MIRT632853 IGF1 insulin like growth factor 1 2 2
MIRT632862 HSPA2 heat shock protein family A (Hsp70) member 2 2 2
MIRT633322 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT633398 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633930 DNAH9 dynein axonemal heavy chain 9 2 2
MIRT634785 CBFA2T2 CBFA2/RUNX1 translocation partner 2 2 2
MIRT634851 ABCF1 ATP binding cassette subfamily F member 1 2 2
MIRT636370 OGFRL1 opioid growth factor receptor like 1 2 2
MIRT637219 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT637690 PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D 2 2
MIRT639196 TRAPPC2 trafficking protein particle complex 2 2 2
MIRT639599 CD3EAP CD3e molecule associated protein 2 2
MIRT639681 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT640669 ARSK arylsulfatase family member K 2 2
MIRT642377 ZNF581 zinc finger protein 581 2 2
MIRT642403 ZNF556 zinc finger protein 556 2 2
MIRT645079 UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII 2 2
MIRT646475 ZNF669 zinc finger protein 669 2 2
MIRT647325 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT647490 ZNF639 zinc finger protein 639 2 2
MIRT647989 PDE12 phosphodiesterase 12 2 2
MIRT648196 CENPN centromere protein N 2 2
MIRT649006 MRPL49 mitochondrial ribosomal protein L49 2 2
MIRT650457 ZNF141 zinc finger protein 141 2 2
MIRT650533 CCDC77 coiled-coil domain containing 77 2 2
MIRT650999 ZNF770 zinc finger protein 770 2 2
MIRT653832 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 4
MIRT655734 NRXN3 neurexin 3 2 2
MIRT657577 GRSF1 G-rich RNA sequence binding factor 1 2 2
MIRT658610 ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 2 2
MIRT658633 ENAH ENAH, actin regulator 2 2
MIRT659820 CASP16 caspase 16, pseudogene 2 2
MIRT661142 ZNF43 zinc finger protein 43 2 2
MIRT661201 MPPE1 metallophosphoesterase 1 2 2
MIRT661436 MANSC1 MANSC domain containing 1 2 2
MIRT661498 CHMP1B charged multivesicular body protein 1B 2 2
MIRT661682 ZNF623 zinc finger protein 623 2 2
MIRT661796 NLRC3 NLR family CARD domain containing 3 2 2
MIRT661808 NUP85 nucleoporin 85 2 2
MIRT661861 ZNF766 zinc finger protein 766 2 2
MIRT661889 EXOSC6 exosome component 6 2 2
MIRT662291 SLC29A4 solute carrier family 29 member 4 2 2
MIRT662515 ANGPT4 angiopoietin 4 2 2
MIRT662682 LRRC47 leucine rich repeat containing 47 2 2
MIRT662716 C10orf111 chromosome 10 open reading frame 111 2 4
MIRT662834 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT662890 PCDHA6 protocadherin alpha 6 2 2
MIRT663134 ULBP3 UL16 binding protein 3 2 2
MIRT663710 ABHD17B abhydrolase domain containing 17B 2 2
MIRT663869 MUC20 mucin 20, cell surface associated 2 2
MIRT664267 NMUR1 neuromedin U receptor 1 2 2
MIRT664510 POLR3K RNA polymerase III subunit K 2 2
MIRT664659 TRIM65 tripartite motif containing 65 2 2
MIRT664849 HUS1 HUS1 checkpoint clamp component 2 2
MIRT664944 CARD6 caspase recruitment domain family member 6 2 4
MIRT665348 YES1 YES proto-oncogene 1, Src family tyrosine kinase 2 2
MIRT665514 UTP15 UTP15, small subunit processome component 2 2
MIRT665648 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT665668 TRAF1 TNF receptor associated factor 1 2 2
MIRT665692 TNPO3 transportin 3 2 2
MIRT665741 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT665850 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT665940 TBC1D19 TBC1 domain family member 19 2 4
MIRT666005 SYNJ2BP synaptojanin 2 binding protein 2 2
MIRT666172 SNX27 sorting nexin family member 27 2 4
MIRT666373 SHOX short stature homeobox 2 2
MIRT667004 PDPN podoplanin 2 4
MIRT667185 NR2F6 nuclear receptor subfamily 2 group F member 6 2 4
MIRT667603 LIPC lipase C, hepatic type 2 2
MIRT667828 IRGQ immunity related GTPase Q 2 2
MIRT667862 IPCEF1 interaction protein for cytohesin exchange factors 1 2 2
MIRT668296 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 4
MIRT668463 FAM208A family with sequence similarity 208 member A 2 2
MIRT668580 ELMSAN1 ELM2 and Myb/SANT domain containing 1 2 4
MIRT669012 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669103 CDK19 cyclin dependent kinase 19 2 2
MIRT670073 ZNF783 zinc finger family member 783 2 2
MIRT670326 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT670756 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670964 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT670985 MED17 mediator complex subunit 17 2 2
MIRT671195 ZNF891 zinc finger protein 891 2 2
MIRT672423 SLC10A6 solute carrier family 10 member 6 2 2
MIRT672495 YIPF4 Yip1 domain family member 4 2 2
MIRT672537 MGAM maltase-glucoamylase 2 2
MIRT672749 ZNF585B zinc finger protein 585B 2 4
MIRT673390 ZNF124 zinc finger protein 124 2 2
MIRT673452 ZNF583 zinc finger protein 583 2 2
MIRT673917 DCTN6 dynactin subunit 6 2 2
MIRT673952 ZNF500 zinc finger protein 500 2 2
MIRT674102 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674167 BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 2 2
MIRT674206 FUT2 fucosyltransferase 2 2 2
MIRT674452 PURB purine rich element binding protein B 2 4
MIRT674687 PLCE1 phospholipase C epsilon 1 2 2
MIRT674701 TMEM59 transmembrane protein 59 2 2
MIRT674800 NPR1 natriuretic peptide receptor 1 2 4
MIRT675247 MAK male germ cell associated kinase 2 2
MIRT676012 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676374 APTX aprataxin 2 2
MIRT676834 TNFSF15 TNF superfamily member 15 2 2
MIRT678193 CRCP CGRP receptor component 2 2
MIRT678293 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT679532 RAB36 RAB36, member RAS oncogene family 2 2
MIRT679669 RABAC1 Rab acceptor 1 2 2
MIRT679850 GPR75 G protein-coupled receptor 75 2 2
MIRT680533 PRIM2 DNA primase subunit 2 2 2
MIRT680563 ZNF584 zinc finger protein 584 2 2
MIRT680577 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT680849 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT680888 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1 like 2 2
MIRT680940 EVC EvC ciliary complex subunit 1 2 2
MIRT680964 SLC15A1 solute carrier family 15 member 1 2 4
MIRT681017 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT681065 PAQR7 progestin and adipoQ receptor family member 7 2 2
MIRT681209 ZNF638 zinc finger protein 638 2 2
MIRT681291 RFC2 replication factor C subunit 2 2 2
MIRT681366 BRI3BP BRI3 binding protein 2 2
MIRT681517 STAT2 signal transducer and activator of transcription 2 2 2
MIRT681549 ZNF738 zinc finger protein 738 2 2
MIRT681574 ABHD15 abhydrolase domain containing 15 2 2
MIRT681597 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 2
MIRT681806 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681912 SLC11A2 solute carrier family 11 member 2 2 2
MIRT681953 SLC19A3 solute carrier family 19 member 3 2 2
MIRT682037 AGXT2 alanine--glyoxylate aminotransferase 2 2 4
MIRT682111 ITGA3 integrin subunit alpha 3 2 4
MIRT682190 SLC38A7 solute carrier family 38 member 7 2 2
MIRT682247 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682394 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682554 EXOSC2 exosome component 2 2 2
MIRT682665 CASP8 caspase 8 2 2
MIRT683283 ZNF99 zinc finger protein 99 2 2
MIRT683359 SCARF1 scavenger receptor class F member 1 2 2
MIRT683453 ACOT2 acyl-CoA thioesterase 2 2 2
MIRT683596 GSTCD glutathione S-transferase C-terminal domain containing 2 2
MIRT683661 ZNF695 zinc finger protein 695 2 2
MIRT683770 CPE carboxypeptidase E 2 2
MIRT683807 NOTO notochord homeobox 2 2
MIRT684462 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684525 C1orf174 chromosome 1 open reading frame 174 2 2
MIRT684985 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685012 CXorf56 chromosome X open reading frame 56 2 2
MIRT685072 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685115 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685477 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT685831 SLC27A1 solute carrier family 27 member 1 2 2
MIRT686032 UMPS uridine monophosphate synthetase 2 2
MIRT686559 TPM3 tropomyosin 3 2 2
MIRT687287 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT687309 OTUD7B OTU deubiquitinase 7B 2 2
MIRT688085 GLUL glutamate-ammonia ligase 2 2
MIRT688168 GABPB1 GA binding protein transcription factor beta subunit 1 2 2
MIRT688584 DARS2 aspartyl-tRNA synthetase 2, mitochondrial 2 2
MIRT688601 CYCS cytochrome c, somatic 2 2
MIRT688921 C11orf84 chromosome 11 open reading frame 84 2 2
MIRT689285 C5AR2 complement component 5a receptor 2 2 2
MIRT689622 AKAP6 A-kinase anchoring protein 6 2 2
MIRT690051 C6orf141 chromosome 6 open reading frame 141 2 2
MIRT690224 C5orf45 MRN complex interacting protein 2 2
MIRT690272 CAMLG calcium modulating ligand 2 2
MIRT690331 MRPS30 mitochondrial ribosomal protein S30 2 2
MIRT690480 ZNF33A zinc finger protein 33A 2 2
MIRT690526 ZNF566 zinc finger protein 566 2 2
MIRT690581 MICA MHC class I polypeptide-related sequence A 2 2
MIRT690675 RPF2 ribosome production factor 2 homolog 2 2
MIRT690790 ZNF589 zinc finger protein 589 2 2
MIRT690873 PLEKHG2 pleckstrin homology and RhoGEF domain containing G2 2 2
MIRT691142 HJURP Holliday junction recognition protein 2 2
MIRT691158 APOL6 apolipoprotein L6 2 2
MIRT691288 CENPM centromere protein M 2 2
MIRT691435 PRICKLE4 prickle planar cell polarity protein 4 2 2
MIRT691749 IKBKG inhibitor of nuclear factor kappa B kinase subunit gamma 2 2
MIRT691833 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT691885 GXYLT2 glucoside xylosyltransferase 2 2 2
MIRT691947 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT692047 PAK1IP1 PAK1 interacting protein 1 2 2
MIRT692668 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT692767 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT692859 ZSWIM1 zinc finger SWIM-type containing 1 2 2
MIRT693122 SCNM1 sodium channel modifier 1 2 2
MIRT693514 MOB3A MOB kinase activator 3A 2 2
MIRT693648 ACBD7 acyl-CoA binding domain containing 7 2 2
MIRT693688 MXRA7 matrix remodeling associated 7 2 2
MIRT694078 RNASEH2B ribonuclease H2 subunit B 2 2
MIRT694163 SLC36A2 solute carrier family 36 member 2 2 2
MIRT694262 RGS9BP regulator of G protein signaling 9 binding protein 2 2
MIRT694506 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT694556 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT694639 MRI1 methylthioribose-1-phosphate isomerase 1 2 2
MIRT694710 CD300LG CD300 molecule like family member g 2 2
MIRT694753 LLGL1 LLGL1, scribble cell polarity complex component 2 2
MIRT694896 ZNF417 zinc finger protein 417 2 2
MIRT695158 BTD biotinidase 2 2
MIRT695275 CD209 CD209 molecule 2 2
MIRT695434 TCF23 transcription factor 23 2 2
MIRT695817 SRD5A1 steroid 5 alpha-reductase 1 2 2
MIRT696008 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT696345 SLC35D2 solute carrier family 35 member D2 2 2
MIRT696368 EIF2S3 eukaryotic translation initiation factor 2 subunit gamma 2 2
MIRT696533 C3 complement C3 2 2
MIRT696779 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT697075 PSMC4 proteasome 26S subunit, ATPase 4 2 2
MIRT697498 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT697630 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT697931 TXNDC16 thioredoxin domain containing 16 2 2
MIRT697966 TSPYL1 TSPY like 1 2 2
MIRT698237 TMEM216 transmembrane protein 216 2 2
MIRT698643 TES testin LIM domain protein 2 2
MIRT698661 TERF2 telomeric repeat binding factor 2 2 2
MIRT698974 SPAST spastin 2 2
MIRT699047 SOAT1 sterol O-acyltransferase 1 2 2
MIRT699193 SLX4IP SLX4 interacting protein 2 2
MIRT699586 SIKE1 suppressor of IKBKE 1 2 2
MIRT699759 SEPHS1 selenophosphate synthetase 1 2 2
MIRT700350 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT700402 RAB13 RAB13, member RAS oncogene family 2 2
MIRT700418 QDPR quinoid dihydropteridine reductase 2 2
MIRT700546 PTBP2 polypyrimidine tract binding protein 2 2 2
MIRT700774 PLA2G4A phospholipase A2 group IVA 2 2
MIRT700875 PER2 period circadian clock 2 2 2
MIRT700952 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT701077 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT701172 PACS2 phosphofurin acidic cluster sorting protein 2 2 2
MIRT701479 NEK9 NIMA related kinase 9 2 2
MIRT701661 MYH9 myosin heavy chain 9 2 2
MIRT701779 MSL2 MSL complex subunit 2 2 2
MIRT702137 MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 2 2
MIRT702494 KIAA1328 KIAA1328 2 2
MIRT703058 GTPBP10 GTP binding protein 10 2 2
MIRT703224 GOLGA3 golgin A3 2 2
MIRT703620 FBXO45 F-box protein 45 2 2
MIRT703657 FAM60A SIN3-HDAC complex associated factor 2 2
MIRT703765 FAM118A family with sequence similarity 118 member A 2 2
MIRT703832 EVI5 ecotropic viral integration site 5 2 2
MIRT703862 ERN1 endoplasmic reticulum to nucleus signaling 1 2 2
MIRT704664 CLCC1 chloride channel CLIC like 1 2 2
MIRT704812 CDC73 cell division cycle 73 2 2
MIRT705608 APAF1 apoptotic peptidase activating factor 1 2 2
MIRT705625 AP1S3 adaptor related protein complex 1 sigma 3 subunit 2 2
MIRT705682 ANKRD40 ankyrin repeat domain 40 2 2
MIRT705813 AKNA AT-hook transcription factor 2 2
MIRT706238 SYT15 synaptotagmin 15 2 2
MIRT706567 EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 2 2
MIRT709657 DFFB DNA fragmentation factor subunit beta 2 2
MIRT710609 ZNF555 zinc finger protein 555 2 2
MIRT711717 IREB2 iron responsive element binding protein 2 2 2
MIRT714122 TMED9 transmembrane p24 trafficking protein 9 2 2
MIRT715204 FKTN fukutin 2 2
MIRT718260 ZDHHC8 zinc finger DHHC-type containing 8 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4419b Fluorouracil 3385 NSC19893 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Cisplatin + Decitabine resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-mir-4419b Androstenedione+Anastrozole sensitive cell line (MCF-7)

Error report submission