pre-miRNA Information
pre-miRNA hsa-mir-3120   
Genomic Coordinates chr1: 172138808 - 172138888
Description Homo sapiens miR-3120 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3120-5p
Sequence 13| CCUGUCUGUGCCUGCUGUACA |33
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 19 1 + 172138838 26449202, 27587585 MiREDiBase
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN26637643 8 COSMIC
COSN31603497 11 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs750386761 8 dbSNP
rs760725207 9 dbSNP
rs766486759 10 dbSNP
rs754055278 12 dbSNP
rs755288536 19 dbSNP
rs754726014 21 dbSNP
Putative Targets

Gene Information
Gene Symbol GINM1   
Synonyms C6orf72
Description glycoprotein integral membrane 1
Transcript NM_138785   
Expression
Putative miRNA Targets on GINM1
3'UTR of GINM1
(miRNA target sites are highlighted)
>GINM1|NM_138785|3'UTR
   1 AACGCCATCTCATATCATGGACTCCGAAGTAGCCTGTTGCCTCCAAATTTGCCACTTGAATATAATTTTCTTTAAATCGT
  81 TAAGAATCAGTTTATACACTAGAGAAATTGCTAAACTCTAAGACTGCCTGAAAATTGACCTTTACAGTGCCAAGTTAAAG
 161 TTTACCTTATTCTCGGCCGGGTGCAGTGGCTCATGCCTGTAATCCCAGGACTTTGGGAGGCCAATGCGGGCGGATCACGA
 241 GGTCAGATCAAGACCATCCTGCCAACATGGTGAAACCCTGTCTCTACTAAAAAAAATAAAAAAATTAGCTGGGTGTGGCG
 321 GTGCACGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGCGGAGGCTGCAGTGAG
 401 CCAAGATCACGCCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTCTGTTTCAAAAAAAAAAAAGTTGACCTTATTCTC
 481 TAAAAGGGCTGGCTATTCATATGATGAATTGTTAAGGAAAACTTAAAGTGGAAGAGAACACATGTGAAGAGACTTTGAAA
 561 TTATCAAAAGAAAAAAAAAAGACCAGACAAAATCTCATGTGCCAATAACTTTTCAAGGTGCCTTTGTTAAGGAAATTATA
 641 TCCACTTAATTACTATAATATATAAGACTTTATGAAAAGCACTTTATAAAATTCTAATTTAAAAGGTCAAGAACTTAACA
 721 CTTATTTTTTTATTCAGTACAGTGTGCCTTTATATTAAGTATGTGACTCAGTATAAAATCACTGAAGTGTATCATGATTT
 801 GATTGTATCCTGTACCAAGACTACTTACCTTGAATGCTCCAAGATTTAAAAGTAGTATGACATGTTCTCACTCTAAAATA
 881 AACTTTTTTTTTTTTTTTTTGAGGAAAAAAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' acaUGUCGUCCGUGUCUGUcc 5'
             | |  || | ||||||  
Target 5' aaaAAAAAAGAC-CAGACAaa 3'
572 - 591 125.00 -6.60
2
miRNA  3' acAUG--UCGUCCGUGUCUGUCc 5'
            |||  :| ||||  ||:||| 
Target 5' gcTACTTGGGAGGCTGAGGCAGg 3'
340 - 362 117.00 -19.00
3
miRNA  3' acaugucguccguGUC-UGUCc 5'
                       ||| |||| 
Target 5' ttatttttttattCAGTACAGt 3'
722 - 743 108.00 -7.02
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30139321 4 COSMIC
COSN30136517 5 COSMIC
COSN30458747 26 COSMIC
COSN30120872 27 COSMIC
COSN31513283 35 COSMIC
COSN31498527 40 COSMIC
COSN31562864 47 COSMIC
COSN30103377 53 COSMIC
COSN30141535 67 COSMIC
COSN30129724 80 COSMIC
COSN22793335 120 COSMIC
COSN29161570 262 COSMIC
COSN28483941 581 COSMIC
COSN2147134 792 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs746196116 4 dbSNP
rs371158335 5 dbSNP
rs1038963558 8 dbSNP
rs775946146 12 dbSNP
rs1349519438 13 dbSNP
rs899058455 15 dbSNP
rs1257547417 17 dbSNP
rs994847833 18 dbSNP
rs763310704 26 dbSNP
rs376231563 27 dbSNP
rs772842903 29 dbSNP
rs1230272869 32 dbSNP
rs368616192 34 dbSNP
rs1231651734 40 dbSNP
rs1439648236 41 dbSNP
rs776384195 42 dbSNP
rs1397285660 52 dbSNP
rs1390238290 56 dbSNP
rs1404711800 61 dbSNP
rs1303803312 63 dbSNP
rs567236002 71 dbSNP
rs1466184149 76 dbSNP
rs1404936272 78 dbSNP
rs539709105 80 dbSNP
rs1043821040 87 dbSNP
rs74502212 91 dbSNP
rs1473274213 100 dbSNP
rs536463841 108 dbSNP
rs1470190583 109 dbSNP
rs1003614331 122 dbSNP
rs1257951817 124 dbSNP
rs903829791 129 dbSNP
rs999495537 136 dbSNP
rs1460738784 146 dbSNP
rs1035628782 154 dbSNP
rs1411144147 155 dbSNP
rs959582297 159 dbSNP
rs1030864432 161 dbSNP
rs1329931302 166 dbSNP
rs896430836 167 dbSNP
rs1287809744 173 dbSNP
rs556059812 175 dbSNP
rs1023925635 176 dbSNP
rs1462658144 179 dbSNP
rs189323168 180 dbSNP
rs1006346333 181 dbSNP
rs1395776488 182 dbSNP
rs1395600545 183 dbSNP
rs1016026002 186 dbSNP
rs1458548336 191 dbSNP
rs145162715 195 dbSNP
rs558419455 196 dbSNP
rs1239832322 204 dbSNP
rs918838830 210 dbSNP
rs1443771611 217 dbSNP
rs577663407 224 dbSNP
rs955641545 225 dbSNP
rs9322191 226 dbSNP
rs560649369 228 dbSNP
rs773490740 229 dbSNP
rs1358608462 232 dbSNP
rs574021137 233 dbSNP
rs1244769442 234 dbSNP
rs554385372 239 dbSNP
rs1300272925 240 dbSNP
rs1437950427 245 dbSNP
rs1436766255 247 dbSNP
rs1137089 251 dbSNP
rs925420121 256 dbSNP
rs935317227 257 dbSNP
rs1052426534 258 dbSNP
rs896401299 260 dbSNP
rs1465420687 261 dbSNP
rs1164110796 262 dbSNP
rs943235382 264 dbSNP
rs112257475 265 dbSNP
rs1039245344 268 dbSNP
rs9766160 269 dbSNP
rs1191363130 270 dbSNP
rs562899312 275 dbSNP
rs71720057 278 dbSNP
rs775014012 278 dbSNP
rs994755333 278 dbSNP
rs113946399 280 dbSNP
rs185216229 283 dbSNP
rs1035130985 289 dbSNP
rs1277163429 289 dbSNP
rs1332257018 289 dbSNP
rs369150777 289 dbSNP
rs557831727 289 dbSNP
rs1294126546 296 dbSNP
rs139738708 298 dbSNP
rs543161342 298 dbSNP
rs565554441 299 dbSNP
rs1430137848 300 dbSNP
rs866233760 303 dbSNP
rs1012421625 314 dbSNP
rs190955528 315 dbSNP
rs1252814488 316 dbSNP
rs1340019407 319 dbSNP
rs181267372 320 dbSNP
rs556669061 321 dbSNP
rs186190299 323 dbSNP
rs924308414 325 dbSNP
rs191429401 326 dbSNP
rs1029968111 327 dbSNP
rs1191524229 328 dbSNP
rs987518683 332 dbSNP
rs1283319059 334 dbSNP
rs954362683 335 dbSNP
rs987436289 346 dbSNP
rs1290123118 365 dbSNP
rs9498376 369 dbSNP
rs576364445 379 dbSNP
rs569791240 380 dbSNP
rs1416343004 382 dbSNP
rs979649189 384 dbSNP
rs756501229 386 dbSNP
rs935453115 387 dbSNP
rs1414371704 395 dbSNP
rs538445132 399 dbSNP
rs779648439 403 dbSNP
rs1380698030 404 dbSNP
rs558453562 409 dbSNP
rs545374840 410 dbSNP
rs571974042 411 dbSNP
rs1301142562 412 dbSNP
rs1224213771 416 dbSNP
rs1045370797 418 dbSNP
rs533953381 420 dbSNP
rs1006462403 421 dbSNP
rs886334976 423 dbSNP
rs1336321030 430 dbSNP
rs1037573613 433 dbSNP
rs939372063 438 dbSNP
rs897669132 441 dbSNP
rs993206595 442 dbSNP
rs113528734 454 dbSNP
rs1242990230 454 dbSNP
rs74985590 454 dbSNP
rs78207545 455 dbSNP
rs79590295 456 dbSNP
rs1182525290 477 dbSNP
rs1459711251 483 dbSNP
rs890097955 485 dbSNP
rs1215845895 489 dbSNP
rs553834338 494 dbSNP
rs116136154 502 dbSNP
rs964366688 503 dbSNP
rs755040986 525 dbSNP
rs1359807380 544 dbSNP
rs980002194 547 dbSNP
rs1314130587 548 dbSNP
rs1450664796 551 dbSNP
rs577844817 555 dbSNP
rs1367664779 557 dbSNP
rs1032440721 565 dbSNP
rs1393778482 566 dbSNP
rs1022444778 571 dbSNP
rs1065333 571 dbSNP
rs1276039663 571 dbSNP
rs904018465 571 dbSNP
rs999621294 571 dbSNP
rs182782326 573 dbSNP
rs1442351081 578 dbSNP
rs1174365654 595 dbSNP
rs988163701 598 dbSNP
rs918016585 602 dbSNP
rs1359918468 603 dbSNP
rs1186803758 613 dbSNP
rs955774796 614 dbSNP
rs1239868750 619 dbSNP
rs949393364 626 dbSNP
rs980832786 648 dbSNP
rs1360105020 650 dbSNP
rs116333924 654 dbSNP
rs964516378 654 dbSNP
rs941922443 656 dbSNP
rs920311542 657 dbSNP
rs1214271344 680 dbSNP
rs17088207 682 dbSNP
rs1359872635 683 dbSNP
rs1295374814 688 dbSNP
rs1406035300 695 dbSNP
rs1365541739 698 dbSNP
rs1301891283 706 dbSNP
rs1432003296 709 dbSNP
rs1290852561 712 dbSNP
rs1385475269 717 dbSNP
rs1037623344 720 dbSNP
rs1427572563 722 dbSNP
rs907798204 722 dbSNP
rs983242418 722 dbSNP
rs1490383243 725 dbSNP
rs1268063852 726 dbSNP
rs1220234111 736 dbSNP
rs1483909588 738 dbSNP
rs1204019491 739 dbSNP
rs1373137696 743 dbSNP
rs373949329 751 dbSNP
rs1306004464 755 dbSNP
rs1234868165 756 dbSNP
rs897637959 756 dbSNP
rs1345029208 760 dbSNP
rs1412229244 765 dbSNP
rs1397589529 772 dbSNP
rs1297990418 780 dbSNP
rs1056509972 791 dbSNP
rs929137061 792 dbSNP
rs948193201 806 dbSNP
rs1314539964 808 dbSNP
rs1051497353 819 dbSNP
rs1197105641 838 dbSNP
rs149229147 839 dbSNP
rs1420818558 843 dbSNP
rs767717775 848 dbSNP
rs1260930096 875 dbSNP
rs897145981 880 dbSNP
rs1230725076 884 dbSNP
rs1261356072 884 dbSNP
rs1306969818 884 dbSNP
rs1336741300 884 dbSNP
rs1336905089 884 dbSNP
rs1439778630 884 dbSNP
rs35907636 884 dbSNP
rs397886673 884 dbSNP
rs558516094 884 dbSNP
rs878931353 884 dbSNP
rs1486422780 886 dbSNP
rs1213496452 887 dbSNP
rs1390013784 894 dbSNP
rs1251474001 902 dbSNP
rs576735619 906 dbSNP
rs545601215 908 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084065. RNA binding protein: AGO2. Condition:CLIP_emetine_AbnovaAb HITS-CLIP data was present in GSM1084072. RNA binding protein: AGO2. Condition:CLIP_nohippuristanol_rep1_AbnovaAb HITS-CLIP data was present in GSM1084073. RNA binding protein: AGO2. Condition:CLIP_hippuristanol_rep1_AbnovaAb HITS-CLIP data was present in GSM1084079. RNA binding protein: AGO2. Condition:CLIP_hippuristanol_rep2_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084065
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_emetine_AbnovaAb
Location of target site ENST00000367419.5 | 3UTR | GAGACAGAGCUUGCAGUGAGCCGAGAU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1084072
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_nohippuristanol_rep1_AbnovaAb
Location of target site ENST00000367419.5 | 3UTR | GACAGAGCUUGCAGUGAGCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM1084073
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_hippuristanol_rep1_AbnovaAb
Location of target site ENST00000367419.5 | 3UTR | GACAGAGCUUGCAGUGAGCCGAGAUCACACCAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM1084079
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_hippuristanol_rep2_AbnovaAb
Location of target site ENST00000367419.5 | 3UTR | GACAGAGCUUGCAGU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
134 hsa-miR-3120-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT096972 BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB 2 2
MIRT442624 LOX lysyl oxidase 2 2
MIRT473438 MDM4 MDM4, p53 regulator 2 2
MIRT490011 KIFC2 kinesin family member C2 2 2
MIRT496449 N6AMT1 N-6 adenine-specific DNA methyltransferase 1 2 2
MIRT496752 TGIF2 TGFB induced factor homeobox 2 2 2
MIRT497721 CYP1A1 cytochrome P450 family 1 subfamily A member 1 2 2
MIRT498287 PADI3 peptidyl arginine deiminase 3 2 2
MIRT503195 ACVR1B activin A receptor type 1B 2 4
MIRT504760 TEP1 telomerase associated protein 1 2 4
MIRT517810 UGDH UDP-glucose 6-dehydrogenase 2 6
MIRT519686 ZNF622 zinc finger protein 622 2 4
MIRT520263 URGCP upregulator of cell proliferation 2 2
MIRT523051 ICMT isoprenylcysteine carboxyl methyltransferase 2 2
MIRT525601 OLR1 oxidized low density lipoprotein receptor 1 2 4
MIRT526995 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT528699 TRAF3IP2 TRAF3 interacting protein 2 2 4
MIRT533142 WNT10A Wnt family member 10A 2 2
MIRT537618 ERI1 exoribonuclease 1 2 2
MIRT539707 EIF3H eukaryotic translation initiation factor 3 subunit H 2 2
MIRT539752 CNBP CCHC-type zinc finger nucleic acid binding protein 2 2
MIRT539808 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT539941 IFNAR2 interferon alpha and beta receptor subunit 2 2 2
MIRT540424 FAM83F family with sequence similarity 83 member F 2 2
MIRT540509 CXCL10 C-X-C motif chemokine ligand 10 2 2
MIRT540720 GUF1 GUF1 homolog, GTPase 2 2
MIRT541630 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT542286 POLR3K RNA polymerase III subunit K 2 2
MIRT542456 AKR7A2 aldo-keto reductase family 7 member A2 2 2
MIRT542550 MRPS10 mitochondrial ribosomal protein S10 2 2
MIRT542771 PPAP2B phospholipid phosphatase 3 2 2
MIRT550085 TRAPPC2 trafficking protein particle complex 2 2 2
MIRT551458 CARKD NAD(P)HX dehydratase 2 2
MIRT555622 PHLPP2 PH domain and leucine rich repeat protein phosphatase 2 2 2
MIRT569136 KATNAL1 katanin catalytic subunit A1 like 1 2 2
MIRT572328 HSPB6 heat shock protein family B (small) member 6 2 2
MIRT574607 LZIC leucine zipper and CTNNBIP1 domain containing 2 2
MIRT575583 Mcm8 minichromosome maintenance 8 homologous recombination repair factor 2 4
MIRT576125 Hrk harakiri, BCL2 interacting protein (contains only BH3 domain) 2 5
MIRT576657 Fam216a family with sequence similarity 216, member A 2 2
MIRT607222 ACSM2A acyl-CoA synthetase medium chain family member 2A 2 4
MIRT607292 CD300E CD300e molecule 2 6
MIRT607746 ANGPT4 angiopoietin 4 2 2
MIRT607905 SPRYD4 SPRY domain containing 4 2 2
MIRT608159 HRK harakiri, BCL2 interacting protein 2 7
MIRT608657 ABCF3 ATP binding cassette subfamily F member 3 2 4
MIRT609115 ZNF703 zinc finger protein 703 2 6
MIRT610231 ACOT9 acyl-CoA thioesterase 9 2 2
MIRT610870 NUDCD3 NudC domain containing 3 2 2
MIRT611217 MC2R melanocortin 2 receptor 2 2
MIRT614858 PLEKHA6 pleckstrin homology domain containing A6 2 2
MIRT616966 LMX1A LIM homeobox transcription factor 1 alpha 2 2
MIRT617258 GLIPR1L2 GLI pathogenesis related 1 like 2 2 2
MIRT618009 SLC9A3R2 SLC9A3 regulator 2 2 2
MIRT619067 BSND barttin CLCNK type accessory beta subunit 2 4
MIRT619295 FAM26E calcium homeostasis modulator family member 5 2 2
MIRT619348 GINM1 glycoprotein integral membrane 1 2 2
MIRT619362 CFHR5 complement factor H related 5 2 2
MIRT619541 PIWIL2 piwi like RNA-mediated gene silencing 2 2 2
MIRT619782 NRIP2 nuclear receptor interacting protein 2 2 2
MIRT619994 NPAP1 nuclear pore associated protein 1 2 2
MIRT621030 CDC14B cell division cycle 14B 2 2
MIRT622033 STAT5A signal transducer and activator of transcription 5A 2 2
MIRT622728 PITPNM3 PITPNM family member 3 2 2
MIRT623144 NAV2 neuron navigator 2 2 2
MIRT623600 IPO9 importin 9 2 2
MIRT624608 B3GALT5 beta-1,3-galactosyltransferase 5 2 2
MIRT624905 CTCFL CCCTC-binding factor like 2 2
MIRT625030 SPC24 SPC24, NDC80 kinetochore complex component 2 2
MIRT625688 MCM8 minichromosome maintenance 8 homologous recombination repair factor 2 5
MIRT626531 EMCN endomucin 2 2
MIRT627204 ZDHHC20 zinc finger DHHC-type containing 20 2 2
MIRT628033 LSAMP limbic system-associated membrane protein 2 2
MIRT628203 FREM2 FRAS1 related extracellular matrix protein 2 2 2
MIRT631012 LINS lines homolog 1 2 2
MIRT633195 HSPE1-MOB4 HSPE1-MOB4 readthrough 2 2
MIRT633890 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT634023 MOB4 MOB family member 4, phocein 2 2
MIRT634416 PLCXD3 phosphatidylinositol specific phospholipase C X domain containing 3 2 2
MIRT636866 ARSE arylsulfatase E (chondrodysplasia punctata 1) 2 2
MIRT642527 ANKRD9 ankyrin repeat domain 9 2 2
MIRT645408 FAM110A family with sequence similarity 110 member A 2 2
MIRT645635 SYTL4 synaptotagmin like 4 2 2
MIRT646013 TNFAIP8L2 TNF alpha induced protein 8 like 2 2 2
MIRT646686 ASGR2 asialoglycoprotein receptor 2 2 2
MIRT652838 TACO1 translational activator of cytochrome c oxidase I 2 2
MIRT655156 PHF21B PHD finger protein 21B 2 2
MIRT658491 EXOC7 exocyst complex component 7 2 2
MIRT659398 CORO2A coronin 2A 2 2
MIRT666825 PRCP prolylcarboxypeptidase 2 2
MIRT666866 POU2F2 POU class 2 homeobox 2 2 2
MIRT668224 GABRA1 gamma-aminobutyric acid type A receptor alpha1 subunit 2 2
MIRT673288 PDE3A phosphodiesterase 3A 2 2
MIRT673878 KLF2 Kruppel like factor 2 2 2
MIRT681721 KCNE4 potassium voltage-gated channel subfamily E regulatory subunit 4 2 2
MIRT682406 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT684109 MCM10 minichromosome maintenance 10 replication initiation factor 2 2
MIRT684423 TUFT1 tuftelin 1 2 2
MIRT684684 OR7D2 olfactory receptor family 7 subfamily D member 2 2 2
MIRT686638 TMEM184C transmembrane protein 184C 2 2
MIRT689457 NXN nucleoredoxin 2 2
MIRT689627 NAA30 N(alpha)-acetyltransferase 30, NatC catalytic subunit 2 2
MIRT690773 PLA2G2C phospholipase A2 group IIC 2 2
MIRT690822 SGSM2 small G protein signaling modulator 2 2 2
MIRT693669 MXRA7 matrix remodeling associated 7 2 2
MIRT695553 CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 2 2
MIRT695872 C19orf52 translocase of inner mitochondrial membrane 29 2 2
MIRT698160 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT699933 RUFY2 RUN and FYVE domain containing 2 2 2
MIRT708639 UBE2W ubiquitin conjugating enzyme E2 W 2 2
MIRT710816 RAB11FIP4 RAB11 family interacting protein 4 2 2
MIRT711242 TRAT1 T-cell receptor associated transmembrane adaptor 1 2 2
MIRT711542 MSH3 mutS homolog 3 2 2
MIRT711749 DTX1 deltex E3 ubiquitin ligase 1 2 2
MIRT712303 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT712922 RPF2 ribosome production factor 2 homolog 2 2
MIRT714027 SYDE2 synapse defective Rho GTPase homolog 2 2 2
MIRT714768 TERF1 telomeric repeat binding factor 1 2 2
MIRT714844 ADAMTS17 ADAM metallopeptidase with thrombospondin type 1 motif 17 2 2
MIRT715223 NPVF neuropeptide VF precursor 2 2
MIRT716110 GMPS guanine monophosphate synthase 2 2
MIRT716174 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT716383 C6orf223 chromosome 6 open reading frame 223 2 2
MIRT716527 KSR2 kinase suppressor of ras 2 2 2
MIRT716962 P2RY6 pyrimidinergic receptor P2Y6 2 2
MIRT717605 DSTYK dual serine/threonine and tyrosine protein kinase 2 2
MIRT717696 PTGS1 prostaglandin-endoperoxide synthase 1 2 2
MIRT721360 ENTHD1 ENTH domain containing 1 2 2
MIRT721381 MACC1 MACC1, MET transcriptional regulator 2 2
MIRT721935 RASSF2 Ras association domain family member 2 2 2
MIRT722094 SUSD1 sushi domain containing 1 2 2
MIRT722837 C17orf102 chromosome 17 open reading frame 102 2 2
MIRT722990 TOR1A torsin family 1 member A 2 2
MIRT724174 ABCF2 ATP binding cassette subfamily F member 2 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-3120-5p Cisplatin 5460033 NSC119875 approved sensitive cell line
hsa-miR-3120-5p Prednisone/Azathioprine/Methotrexate/Cyclophosphamide/Mycophenolate mofetil sensitive tissue (myasthenia gravis)
hsa-miR-3120-5p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)

Error report submission