pre-miRNA Information
pre-miRNA hsa-mir-4282   
Genomic Coordinates chr6: 72967687 - 72967753
Description Homo sapiens miR-4282 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4282
Sequence 40| UAAAAUUUGCAUCCAGGA |57
Evidence Experimental
Experiments SOLiD
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN32074657 13 COSMIC
COSN6331413 18 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1195771339 5 dbSNP
rs755058572 6 dbSNP
rs1245753664 11 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol PRDM10   
Synonyms PFM7
Description PR/SET domain 10
Transcript NM_020228   
Other Transcripts NM_199437 , NM_199438 , NM_199439   
Expression
Putative miRNA Targets on PRDM10
3'UTR of PRDM10
(miRNA target sites are highlighted)
>PRDM10|NM_020228|3'UTR
   1 CTTCCACCCTGGAGCTTGAATCCAGCACCCACCTCATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTT
  81 TTGTAAGATTTATTATTCACTCAAGAGTTCGGAAACCACAGTTTTGTCTCTCATCCATACACTGGGGTTTATTTTGCCAA
 161 GGTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCG
 241 AGGTGGAGAGAATTTGCCTTGCTCTTGAGCTGGTCTTTTAACATACTGACGAGCCTTACTTTTCCTTTGTGGAAATATTA
 321 AGTGGCATATTGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATTCCAAGCCAT
 401 GGCACCAAAGGAGAAGGGGCATTTTGTGGGTGTGCATTAGGTCTGAACTGCTTTATCTTGTTTTAGTTTTCAGTAATTTA
 481 ACAAAGGGAGCCTGCTGAATAACAAAATTAAAATGATGAAACAAAAGTTTGACAGTGATATTCTGAAGCAAAAACTGTCA
 561 TCTAAATTTTTCTTGCTGATTTTTTTTAACTTCCCTATTTTAGAAAACTATTGTTGGGCTGTTGGTAGTGCTTTCCACAG
 641 ATGCTGGTCCTCAGTGGATTAGGTCAGAAGCTCATGTTCTGATAGTTCTTCATTATTTCACAAAGGTGGACAACCTGAAA
 721 GAGAAAAGGCTGCTTGATGTCAGCAGAATCTAAACCCCTACATTAAAGCTTTGCCTCCCATTCTGTGGTTGTGGTGGTGG
 801 TAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGAGAGAGAGAGAGAGAAAGTATTGAAATTTTGTTCTG
 881 CCTTGCAGGATCCATTTATCATTCATTGGTAAAGGATATATTCCTTGTTCTTACCAAGTGTACATTTAACTCTTGCTGAC
 961 ATGTTCAGTGTATTTTATTACTTTTAATGCTGTCTTAAAATGAACATTCTTTAAAGTTGGACAGGAAGGTGGCATTTCTT
1041 ATTTATTAACATTTTTAACTTTAAACATATTGTGACTCATCTAGACCTTTTAATAAGACGATCAACTTCACACTTAGGGA
1121 AAAAATTAAAATGTGATGGCCACTTCTAATAATTCAGGTAGTTATAAGGGATCTGGAAGAAATCCAGTCTTTATGAATAT
1201 ACTATTAGTTGGGCATTAAAAAATCAGTATATATTTTAACTTTTTGTGACATGCTAACACATTTTCAGAATAATTATTGC
1281 ATAGTAGAATTTATTACTCCAGAACAGAAAGACCTTACTTCATTTCAAATGAAGTTAATTAATTTACATTTCTGGGTAAA
1361 AACTGGTTCTATAAATTAAGTAGAGTAGCTTCTTTATGATAAAGACAATTTTCTGAAAAGTGAACAATTCTGTTAAAAGA
1441 ACTTTATTGATGTGTAGATTTCGCACTTTATTTCTGAGACTGCGTTCATGTAGTTGTTCCCCAATGTTTGAGTACTAAGA
1521 GAACTTGAGAAAATTACTTCATAAACATATGGAAACTGAAAATGGACTCTCTTTGTGACAAAGATATTCAACAGAAAATA
1601 TTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAAGTCCCACAGTGTAATGATTACAAATATCCTAGTGTCCGGTC
1681 TAGAAAGACTTTCTAGGAGAAGACTAGTGGAATTTTCTAAAGGTTCAGTTTTAGCTTTTATAACTTAAATTTGGCCCTGT
1761 TACGTTCTTTTTAATTTGAACCATAAGGTATCTCCCCTCCCTTCAGGAATAACTTATTGGAAAACTGAAAAGAATCACTG
1841 AATGGAATGTTCATTTTATGGCAGTTGTTTTAAGTTTTAAAATACACAGAGGAAAATATTGTGGAAGGACCTCTTTGTTG
1921 CTTTCCCTTCTAAGTTGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTGGTCCTTAAGTGAAATAAAGACTCTAAAACT
2001 AATTTGTATATTATCAGCCAGAGATGCGGATGGCAGTCGAGCCAAATCGCATGGCTTTCAGATCAGGTATTCTGCACATT
2081 CATTCCAAGGTCATAGATTTTTAAAAGGACCTGGATTTGAAGAGATGGCAAATGATGAGCCATCAGAAAACTTAATTTGG
2161 AAAACATGTATGTAGCCAGTGTGGATATTGTGGCCTCTCTCAAGACACATTGACACTGTAGACTTCATTCAGTCCAGTGT
2241 GAGTATTTTGGAGTAGGTTGGATGTAGATTTTGTTTTTATCATTGATTTGTACCGACAGAAATAGACATTTCATCATGTA
2321 AAATTCCTGTTATTCTGGAAAAACCTATTGTTTTGATCTTCTTGTTTTCTGACTTGGAAGTATCCTTTCAAAAAAACTCT
2401 TAAGATATCTAGGTCTAAAAAGCACTTCATGAGATGCTAAAGCTGACCCACTGGTTGAAAATGTTGACCCTATCCTGTTA
2481 TTTAAATGTGAACATTTATTGTACATTCAGTGAGTTATAGTGTTAATAGTCTTGTGCTATGCAGCAGGTGTAAAAATTAA
2561 TAAATATATTTTTTAATAAACATGTTTGTATGTGTGAAGCTACAAGAAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' agGACCUACGUUUAAAAu 5'
            :||||||:|:||||| 
Target 5' ggTTGGATGTAGATTTTg 3'
2256 - 2273 156.00 -17.50
2
miRNA  3' agGACCUACGUUUAAAAu 5'
            |||| || |||| || 
Target 5' caCTGGTTGAAAATGTTg 3'
2449 - 2466 132.00 -7.70
3
miRNA  3' agGACCUACGUUUAAAAu 5'
            ||  :|| |||| || 
Target 5' tcCTTTGTGGAAATATTa 3'
303 - 320 120.00 -7.50
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN26990268 36 COSMIC
COSN19586122 69 COSMIC
COSN30123204 71 COSMIC
COSN2533810 78 COSMIC
COSN8215835 101 COSMIC
COSN30501923 102 COSMIC
COSN30518012 135 COSMIC
COSN28733108 195 COSMIC
COSN26552816 294 COSMIC
COSN31562842 345 COSMIC
COSN20109009 844 COSMIC
COSN16353122 1142 COSMIC
COSN26617645 1193 COSMIC
COSN31548404 1341 COSMIC
COSN28918926 1366 COSMIC
COSN16031782 1379 COSMIC
COSN31513982 1439 COSMIC
COSN31529330 1462 COSMIC
COSN25765271 1628 COSMIC
COSN20242778 1705 COSMIC
COSN32065218 1764 COSMIC
COSN17181870 1809 COSMIC
COSN20109005 1937 COSMIC
COSN20109008 1938 COSMIC
COSN31517451 1981 COSMIC
COSN24040450 2137 COSMIC
COSN26634919 2281 COSMIC
COSN28702811 2282 COSMIC
COSN23731581 2299 COSMIC
COSN31485399 2379 COSMIC
COSN31553333 2488 COSMIC
COSN25046815 2492 COSMIC
COSN1519165 2559 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs750590671 3 dbSNP
rs372614307 4 dbSNP
rs1224804353 5 dbSNP
rs1221006820 6 dbSNP
rs887436208 12 dbSNP
rs755905204 23 dbSNP
rs1347394026 25 dbSNP
rs752624430 26 dbSNP
rs1402908696 31 dbSNP
rs1337261504 32 dbSNP
rs769942850 33 dbSNP
rs1540408 36 dbSNP
rs781264410 42 dbSNP
rs774012886 43 dbSNP
rs570578591 47 dbSNP
rs901616392 48 dbSNP
rs1019556991 55 dbSNP
rs999689442 63 dbSNP
rs1240848757 65 dbSNP
rs1041209050 67 dbSNP
rs184131866 69 dbSNP
rs533900263 70 dbSNP
rs1303705063 72 dbSNP
rs113633020 77 dbSNP
rs1043964591 78 dbSNP
rs1171293742 96 dbSNP
rs370424086 108 dbSNP
rs56107743 110 dbSNP
rs1317627761 111 dbSNP
rs1324597633 115 dbSNP
rs1438756602 119 dbSNP
rs548597814 120 dbSNP
rs1302363112 121 dbSNP
rs531960192 121 dbSNP
rs1232390315 133 dbSNP
rs1288347197 134 dbSNP
rs1410190934 138 dbSNP
rs1204893213 143 dbSNP
rs1398628455 146 dbSNP
rs563055380 149 dbSNP
rs1296308354 165 dbSNP
rs1194753597 175 dbSNP
rs1055236722 177 dbSNP
rs868320920 188 dbSNP
rs3734078 195 dbSNP
rs1365166986 208 dbSNP
rs1377652827 218 dbSNP
rs1157752857 224 dbSNP
rs769565987 225 dbSNP
rs1178185809 226 dbSNP
rs1462967896 227 dbSNP
rs374110675 234 dbSNP
rs969422665 235 dbSNP
rs939868896 239 dbSNP
rs1438799664 240 dbSNP
rs866152626 245 dbSNP
rs1336543682 249 dbSNP
rs1238549012 269 dbSNP
rs1278168156 271 dbSNP
rs909810585 275 dbSNP
rs1025028666 281 dbSNP
rs991921827 284 dbSNP
rs983972851 287 dbSNP
rs962187142 290 dbSNP
rs533079456 291 dbSNP
rs1438081234 292 dbSNP
rs747866518 294 dbSNP
rs1361864294 295 dbSNP
rs953731353 310 dbSNP
rs1476027445 319 dbSNP
rs1165651964 321 dbSNP
rs1417066613 326 dbSNP
rs1014797251 341 dbSNP
rs1439917105 353 dbSNP
rs148229841 360 dbSNP
rs1391047856 363 dbSNP
rs541033368 368 dbSNP
rs965534296 371 dbSNP
rs1029057124 379 dbSNP
rs995859514 395 dbSNP
rs1333299429 397 dbSNP
rs1031414779 399 dbSNP
rs921076725 402 dbSNP
rs570696363 407 dbSNP
rs902650880 416 dbSNP
rs1480640342 418 dbSNP
rs1194881597 426 dbSNP
rs1022569375 430 dbSNP
rs1010028972 432 dbSNP
rs571938479 435 dbSNP
rs552282911 436 dbSNP
rs1474196237 438 dbSNP
rs562064588 443 dbSNP
rs1323165052 466 dbSNP
rs1373722251 482 dbSNP
rs1461540084 496 dbSNP
rs1052647336 506 dbSNP
rs895384488 516 dbSNP
rs1415828494 517 dbSNP
rs1312687507 523 dbSNP
rs1289212022 533 dbSNP
rs1055159185 535 dbSNP
rs1296842944 538 dbSNP
rs1307645334 558 dbSNP
rs1226047187 559 dbSNP
rs758238082 562 dbSNP
rs1272102831 573 dbSNP
rs527344821 573 dbSNP
rs143068816 577 dbSNP
rs1349636886 580 dbSNP
rs180899219 587 dbSNP
rs1484526713 588 dbSNP
rs925578717 588 dbSNP
rs1045017246 604 dbSNP
rs73575348 618 dbSNP
rs1428045872 621 dbSNP
rs1191071607 625 dbSNP
rs1337245513 643 dbSNP
rs1396927430 643 dbSNP
rs1173187086 650 dbSNP
rs190271611 656 dbSNP
rs1455672777 662 dbSNP
rs555561776 665 dbSNP
rs1290033037 669 dbSNP
rs553839150 669 dbSNP
rs1380981599 670 dbSNP
rs962184330 674 dbSNP
rs1372464114 675 dbSNP
rs1409657438 676 dbSNP
rs939861180 678 dbSNP
rs1338193469 686 dbSNP
rs1279154863 689 dbSNP
rs535374467 692 dbSNP
rs1217649658 708 dbSNP
rs1540409 713 dbSNP
rs1048196921 720 dbSNP
rs1485521806 723 dbSNP
rs1159356995 729 dbSNP
rs1206689768 737 dbSNP
rs932599330 740 dbSNP
rs1254978515 742 dbSNP
rs149464223 745 dbSNP
rs984662719 746 dbSNP
rs921170323 748 dbSNP
rs1181496592 761 dbSNP
rs976861028 769 dbSNP
rs548895667 777 dbSNP
rs1344924626 780 dbSNP
rs924365331 790 dbSNP
rs1328431914 792 dbSNP
rs866061869 794 dbSNP
rs1440987238 800 dbSNP
rs965703569 803 dbSNP
rs966888953 805 dbSNP
rs1225072556 807 dbSNP
rs762825974 808 dbSNP
rs1018657304 823 dbSNP
rs1022498242 824 dbSNP
rs1269019800 830 dbSNP
rs538168920 832 dbSNP
rs1226502918 837 dbSNP
rs959645480 846 dbSNP
rs1033934084 849 dbSNP
rs1352617176 854 dbSNP
rs1277599285 858 dbSNP
rs1010388332 859 dbSNP
rs10568533 860 dbSNP
rs1213124437 860 dbSNP
rs566483837 860 dbSNP
rs796649908 860 dbSNP
rs1003957297 862 dbSNP
rs1238041148 863 dbSNP
rs1341056222 864 dbSNP
rs370296206 878 dbSNP
rs1167808265 879 dbSNP
rs906504511 882 dbSNP
rs1317072979 885 dbSNP
rs1461544261 889 dbSNP
rs1449841361 890 dbSNP
rs1037540669 892 dbSNP
rs1004322972 901 dbSNP
rs529740492 905 dbSNP
rs778727311 906 dbSNP
rs932481368 909 dbSNP
rs1372433551 914 dbSNP
rs1320839123 920 dbSNP
rs904070148 922 dbSNP
rs184761340 924 dbSNP
rs1295110759 933 dbSNP
rs1335361760 934 dbSNP
rs1232564910 935 dbSNP
rs1402124100 936 dbSNP
rs1309260149 937 dbSNP
rs1205567787 938 dbSNP
rs374307357 945 dbSNP
rs948343623 951 dbSNP
rs917906537 953 dbSNP
rs1258605032 955 dbSNP
rs1040931985 956 dbSNP
rs1458727648 968 dbSNP
rs943716863 969 dbSNP
rs1161917788 977 dbSNP
rs1411001682 1002 dbSNP
rs1411151964 1002 dbSNP
rs1170780763 1007 dbSNP
rs1353541109 1021 dbSNP
rs532714728 1023 dbSNP
rs1314528798 1028 dbSNP
rs907970612 1029 dbSNP
rs1414096756 1033 dbSNP
rs1282348947 1050 dbSNP
rs1182219324 1057 dbSNP
rs1444104607 1072 dbSNP
rs137866324 1078 dbSNP
rs35751590 1092 dbSNP
rs968487717 1098 dbSNP
rs547176019 1099 dbSNP
rs145568613 1100 dbSNP
rs1617778 1101 dbSNP
rs386758837 1102 dbSNP
rs1213226667 1119 dbSNP
rs1283813797 1126 dbSNP
rs1485512351 1135 dbSNP
rs1186132389 1149 dbSNP
rs1244324435 1152 dbSNP
rs1476138507 1158 dbSNP
rs959489729 1163 dbSNP
rs371252997 1164 dbSNP
rs1359804156 1177 dbSNP
rs1293877845 1184 dbSNP
rs577000705 1185 dbSNP
rs1358605330 1188 dbSNP
rs1375905288 1190 dbSNP
rs878911317 1193 dbSNP
rs192024075 1197 dbSNP
rs531523428 1200 dbSNP
rs971368148 1203 dbSNP
rs1346862058 1204 dbSNP
rs1432271761 1212 dbSNP
rs1015624557 1223 dbSNP
rs1317111421 1228 dbSNP
rs1004161396 1238 dbSNP
rs888567437 1239 dbSNP
rs1387720060 1246 dbSNP
rs1367790719 1251 dbSNP
rs1269693638 1254 dbSNP
rs1162254202 1274 dbSNP
rs1424633641 1280 dbSNP
rs1236777776 1281 dbSNP
rs1026985321 1286 dbSNP
rs955955356 1298 dbSNP
rs1032771383 1311 dbSNP
rs1001404361 1313 dbSNP
rs562397036 1314 dbSNP
rs996642096 1321 dbSNP
rs374839534 1330 dbSNP
rs899637329 1334 dbSNP
rs1169790099 1339 dbSNP
rs1448846594 1348 dbSNP
rs1041380265 1361 dbSNP
rs943994914 1366 dbSNP
rs545633256 1369 dbSNP
rs576624426 1371 dbSNP
rs1246898995 1372 dbSNP
rs1447124306 1382 dbSNP
rs1241750630 1385 dbSNP
rs1041417190 1388 dbSNP
rs947033190 1392 dbSNP
rs1285150584 1397 dbSNP
rs1195168808 1399 dbSNP
rs1199779377 1408 dbSNP
rs1023791135 1418 dbSNP
rs1170627208 1420 dbSNP
rs565109306 1421 dbSNP
rs1401230189 1423 dbSNP
rs914327390 1426 dbSNP
rs991203878 1428 dbSNP
rs1443179414 1431 dbSNP
rs938178059 1435 dbSNP
rs896764227 1436 dbSNP
rs146755037 1439 dbSNP
rs1370490694 1442 dbSNP
rs1056365941 1446 dbSNP
rs751084445 1446 dbSNP
rs1351780931 1451 dbSNP
rs760253995 1452 dbSNP
rs1336809320 1460 dbSNP
rs940714648 1462 dbSNP
rs752166134 1463 dbSNP
rs1223701232 1464 dbSNP
rs1346974426 1465 dbSNP
rs540354585 1467 dbSNP
rs1404711165 1468 dbSNP
rs1196234215 1474 dbSNP
rs1355701065 1478 dbSNP
rs1331385145 1481 dbSNP
rs886487673 1482 dbSNP
rs746532109 1483 dbSNP
rs971037648 1484 dbSNP
rs1418835333 1486 dbSNP
rs1173407951 1487 dbSNP
rs1481569027 1489 dbSNP
rs1427443186 1490 dbSNP
rs1197096401 1491 dbSNP
rs1409632775 1495 dbSNP
rs930761397 1496 dbSNP
rs921750337 1499 dbSNP
rs1233398160 1500 dbSNP
rs1016255372 1519 dbSNP
rs982747239 1525 dbSNP
rs1271724113 1534 dbSNP
rs35505220 1534 dbSNP
rs952679111 1547 dbSNP
rs1409571788 1550 dbSNP
rs779415877 1551 dbSNP
rs1027039055 1556 dbSNP
rs1325319479 1565 dbSNP
rs1354954500 1570 dbSNP
rs187477357 1571 dbSNP
rs1223290974 1573 dbSNP
rs1252216059 1573 dbSNP
rs955736653 1586 dbSNP
rs1181151924 1587 dbSNP
rs1281803616 1593 dbSNP
rs1440599433 1595 dbSNP
rs1033133196 1601 dbSNP
rs1354433610 1604 dbSNP
rs1367973725 1605 dbSNP
rs775742599 1609 dbSNP
rs772738923 1615 dbSNP
rs1019475363 1620 dbSNP
rs1397438825 1622 dbSNP
rs554685669 1628 dbSNP
rs1470993620 1629 dbSNP
rs1023738888 1630 dbSNP
rs1415941074 1640 dbSNP
rs117222935 1653 dbSNP
rs1041617631 1654 dbSNP
rs1479998156 1659 dbSNP
rs183982399 1660 dbSNP
rs1339426342 1661 dbSNP
rs759684171 1663 dbSNP
rs1252746036 1667 dbSNP
rs865815065 1673 dbSNP
rs538190301 1676 dbSNP
rs1203941517 1677 dbSNP
rs1272228784 1681 dbSNP
rs1232223587 1686 dbSNP
rs1486494282 1690 dbSNP
rs1188658747 1701 dbSNP
rs570950528 1704 dbSNP
rs1422172571 1708 dbSNP
rs1035284728 1716 dbSNP
rs892778536 1717 dbSNP
rs776830217 1724 dbSNP
rs1783908 1726 dbSNP
rs928365135 1739 dbSNP
rs559286331 1748 dbSNP
rs1302825262 1749 dbSNP
rs539288400 1750 dbSNP
rs982341488 1751 dbSNP
rs949542895 1754 dbSNP
rs908799993 1755 dbSNP
rs1049558627 1760 dbSNP
rs1297132434 1763 dbSNP
rs540293115 1763 dbSNP
rs952734843 1764 dbSNP
rs1026967208 1771 dbSNP
rs1294943922 1779 dbSNP
rs975373225 1783 dbSNP
rs777727723 1787 dbSNP
rs1482246563 1790 dbSNP
rs1222409548 1792 dbSNP
rs1262518748 1797 dbSNP
rs944532082 1800 dbSNP
rs1373327993 1812 dbSNP
rs1397095569 1814 dbSNP
rs547507637 1817 dbSNP
rs1175837267 1847 dbSNP
rs1454661565 1848 dbSNP
rs988744769 1851 dbSNP
rs1008066774 1854 dbSNP
rs925626257 1861 dbSNP
rs1388824046 1872 dbSNP
rs1433700172 1882 dbSNP
rs1380606541 1892 dbSNP
rs1318173065 1897 dbSNP
rs967584353 1897 dbSNP
rs1020227906 1907 dbSNP
rs527410345 1910 dbSNP
rs192786131 1914 dbSNP
rs771932135 1918 dbSNP
rs1268673066 1927 dbSNP
rs1464541005 1929 dbSNP
rs1206869688 1937 dbSNP
rs1254927240 1943 dbSNP
rs547881662 1945 dbSNP
rs7941784 1949 dbSNP
rs1488943245 1951 dbSNP
rs7120042 1952 dbSNP
rs766830897 1954 dbSNP
rs1161097665 1955 dbSNP
rs1190773769 1955 dbSNP
rs767910261 1960 dbSNP
rs990913380 1963 dbSNP
rs960863203 1965 dbSNP
rs774979237 1966 dbSNP
rs1184069674 1968 dbSNP
rs1288954890 1969 dbSNP
rs1367570644 1969 dbSNP
rs139580654 1969 dbSNP
rs1436754414 1969 dbSNP
rs57861880 1969 dbSNP
rs774301807 1969 dbSNP
rs796561119 1969 dbSNP
rs879092587 1969 dbSNP
rs1055500665 1978 dbSNP
rs1445949435 1989 dbSNP
rs531197060 1991 dbSNP
rs1240683887 2006 dbSNP
rs1005126627 2008 dbSNP
rs369189480 2012 dbSNP
rs1182411735 2024 dbSNP
rs748067933 2027 dbSNP
rs1045858669 2028 dbSNP
rs779538421 2036 dbSNP
rs949592321 2038 dbSNP
rs908692026 2039 dbSNP
rs1347725182 2048 dbSNP
rs1316639993 2051 dbSNP
rs1463162957 2073 dbSNP
rs1293166983 2074 dbSNP
rs1248750916 2075 dbSNP
rs1308435435 2096 dbSNP
rs1349590682 2098 dbSNP
rs1047200740 2108 dbSNP
rs1295051057 2111 dbSNP
rs1380059013 2119 dbSNP
rs1227792247 2129 dbSNP
rs1314516067 2129 dbSNP
rs931595924 2143 dbSNP
rs1287760199 2146 dbSNP
rs1309504205 2156 dbSNP
rs545670300 2156 dbSNP
rs975424234 2161 dbSNP
rs1433619513 2164 dbSNP
rs964352288 2170 dbSNP
rs912657423 2171 dbSNP
rs1180805871 2175 dbSNP
rs1428404749 2177 dbSNP
rs987262652 2193 dbSNP
rs778583540 2199 dbSNP
rs1450960254 2200 dbSNP
rs754733596 2212 dbSNP
rs1164168415 2221 dbSNP
rs532208519 2234 dbSNP
rs1383283527 2255 dbSNP
rs560102434 2256 dbSNP
rs1163537126 2266 dbSNP
rs1020156575 2268 dbSNP
rs550889387 2274 dbSNP
rs1011405510 2281 dbSNP
rs1043654 2282 dbSNP
rs1447132908 2293 dbSNP
rs150150777 2294 dbSNP
rs1270098548 2295 dbSNP
rs1229495382 2296 dbSNP
rs544209337 2297 dbSNP
rs1297123153 2301 dbSNP
rs1001216491 2303 dbSNP
rs1490018699 2311 dbSNP
rs1236913934 2313 dbSNP
rs1291689199 2315 dbSNP
rs1279735599 2316 dbSNP
rs1442373803 2318 dbSNP
rs906833532 2319 dbSNP
rs1228255308 2329 dbSNP
rs536251278 2334 dbSNP
rs762819242 2344 dbSNP
rs1053393796 2347 dbSNP
rs1188875503 2355 dbSNP
rs1045502747 2356 dbSNP
rs1389149407 2357 dbSNP
rs1005065048 2365 dbSNP
rs1174125837 2370 dbSNP
rs1425532107 2378 dbSNP
rs56363123 2381 dbSNP
rs779835332 2383 dbSNP
rs1047254647 2405 dbSNP
rs1390994580 2416 dbSNP
rs555004868 2417 dbSNP
rs931479832 2424 dbSNP
rs948397096 2435 dbSNP
rs920183044 2447 dbSNP
rs1406531920 2450 dbSNP
rs1275826516 2455 dbSNP
rs1218051520 2462 dbSNP
rs1344673062 2462 dbSNP
rs1040328614 2476 dbSNP
rs140820136 2477 dbSNP
rs912531184 2489 dbSNP
rs1292811814 2492 dbSNP
rs575708360 2505 dbSNP
rs559322801 2507 dbSNP
rs1246839096 2508 dbSNP
rs1463276749 2534 dbSNP
rs986804158 2536 dbSNP
rs1462070316 2537 dbSNP
rs1247133984 2539 dbSNP
rs1405050594 2546 dbSNP
rs1477565677 2547 dbSNP
rs1374254533 2550 dbSNP
rs575638359 2571 dbSNP
rs959815667 2572 dbSNP
rs556170445 2575 dbSNP
rs928135692 2575 dbSNP
rs984044922 2577 dbSNP
rs1028332196 2590 dbSNP
rs1324451958 2590 dbSNP
rs531172781 2590 dbSNP
rs562152879 2594 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084064. RNA binding protein: AGO2. Condition:CLIP_noemetine_AbnovaAb HITS-CLIP data was present in GSM1084065. RNA binding protein: AGO2. Condition:CLIP_emetine_AbnovaAb HITS-CLIP data was present in GSM1084079. RNA binding protein: AGO2. Condition:CLIP_hippuristanol_rep2_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084064
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noemetine_AbnovaAb
Location of target site ENST00000358825.5 | 3UTR | AACUAUUGAGAGAGAGAGAGAGAAAGUAUUGA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1084065
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_emetine_AbnovaAb
Location of target site ENST00000358825.5 | 3UTR | UAUUGAGAGAGAGAGAGAGAAAGUAUUGAAAU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM1084079
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_hippuristanol_rep2_AbnovaAb
Location of target site ENST00000358825.5 | 3UTR | UAUUGAGAGAGAGAGAGAGAAAGUAUUGAAAUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
280 hsa-miR-4282 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT057628 LCOR ligand dependent nuclear receptor corepressor 2 2
MIRT060732 RPS3 ribosomal protein S3 2 2
MIRT063371 ETNK1 ethanolamine kinase 1 2 2
MIRT066257 LRIG3 leucine rich repeats and immunoglobulin like domains 3 2 4
MIRT070774 HIF1A hypoxia inducible factor 1 alpha subunit 2 2
MIRT070871 EIF2S1 eukaryotic translation initiation factor 2 subunit alpha 2 4
MIRT078056 PCTP phosphatidylcholine transfer protein 2 2
MIRT078408 DCAF7 DDB1 and CUL4 associated factor 7 2 4
MIRT084059 PPP1R3D protein phosphatase 1 regulatory subunit 3D 2 2
MIRT093537 GALNT7 polypeptide N-acetylgalactosaminyltransferase 7 2 6
MIRT096072 SFXN1 sideroflexin 1 2 2
MIRT098316 REV3L REV3 like, DNA directed polymerase zeta catalytic subunit 2 2
MIRT100493 UHRF1BP1 UHRF1 binding protein 1 2 2
MIRT102254 HBP1 HMG-box transcription factor 1 2 4
MIRT105318 VPS37A VPS37A, ESCRT-I subunit 2 2
MIRT114143 MZT1 mitotic spindle organizing protein 1 2 4
MIRT114873 DICER1 dicer 1, ribonuclease III 2 2
MIRT134683 PNRC2 proline rich nuclear receptor coactivator 2 2 2
MIRT137640 RCOR1 REST corepressor 1 2 2
MIRT155449 CCNT2 cyclin T2 2 4
MIRT165656 DCTN4 dynactin subunit 4 2 2
MIRT177570 CSTF2T cleavage stimulation factor subunit 2 tau variant 2 4
MIRT188514 E2F7 E2F transcription factor 7 2 10
MIRT193019 TMOD3 tropomodulin 3 2 4
MIRT195823 GADD45A growth arrest and DNA damage inducible alpha 2 2
MIRT195885 DEPDC1 DEP domain containing 1 2 6
MIRT206029 NUP50 nucleoporin 50 2 6
MIRT212148 CLCN3 chloride voltage-gated channel 3 2 2
MIRT213999 DCP2 decapping mRNA 2 2 2
MIRT214650 HNRNPA0 heterogeneous nuclear ribonucleoprotein A0 2 2
MIRT221568 CBX3 chromobox 3 2 2
MIRT224544 ZNF623 zinc finger protein 623 2 2
MIRT227654 SET SET nuclear proto-oncogene 2 2
MIRT229992 CHIC1 cysteine rich hydrophobic domain 1 2 2
MIRT238968 QKI QKI, KH domain containing RNA binding 2 2
MIRT239825 ACTB actin beta 2 2
MIRT241084 ZXDA zinc finger, X-linked, duplicated A 2 4
MIRT244852 ZBTB5 zinc finger and BTB domain containing 5 2 2
MIRT264534 TARDBP TAR DNA binding protein 2 2
MIRT271438 SKI SKI proto-oncogene 2 2
MIRT271597 ENAH ENAH, actin regulator 2 2
MIRT294332 ZNF264 zinc finger protein 264 2 2
MIRT296341 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT301715 TEF TEF, PAR bZIP transcription factor 2 2
MIRT308549 ZNF654 zinc finger protein 654 2 2
MIRT313866 DEPDC1B DEP domain containing 1B 2 2
MIRT315529 MARCKS myristoylated alanine rich protein kinase C substrate 2 2
MIRT321066 RABGEF1 RAB guanine nucleotide exchange factor 1 2 2
MIRT343777 NUTF2 nuclear transport factor 2 2 2
MIRT359109 MAP1B microtubule associated protein 1B 2 2
MIRT397393 GOLGA3 golgin A3 2 4
MIRT400822 CPEB2 cytoplasmic polyadenylation element binding protein 2 2 2
MIRT442171 DSEL dermatan sulfate epimerase-like 2 2
MIRT442777 JAG1 jagged 1 2 2
MIRT442862 SCARF1 scavenger receptor class F member 1 2 4
MIRT442919 PCBD2 pterin-4 alpha-carbinolamine dehydratase 2 2 2
MIRT444567 TRA2B transformer 2 beta homolog 2 2
MIRT444718 CMSS1 cms1 ribosomal small subunit homolog (yeast) 2 2
MIRT445018 RBMS3 RNA binding motif single stranded interacting protein 3 2 2
MIRT445853 LRRC1 leucine rich repeat containing 1 2 2
MIRT446242 HELZ helicase with zinc finger 2 2
MIRT446542 GOLGA8B golgin A8 family member B 2 2
MIRT446643 SPTY2D1 SPT2 chromatin protein domain containing 1 2 2
MIRT446948 ZMAT3 zinc finger matrin-type 3 2 4
MIRT447061 KCNAB1 potassium voltage-gated channel subfamily A member regulatory beta subunit 1 2 2
MIRT447327 ZSCAN21 zinc finger and SCAN domain containing 21 2 2
MIRT447995 CDX1 caudal type homeobox 1 2 2
MIRT448543 RHEBP1 RHEB pseudogene 1 2 6
MIRT448752 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT448772 GOLGA8A golgin A8 family member A 2 2
MIRT449342 WDR26 WD repeat domain 26 2 2
MIRT450011 SLC16A6 solute carrier family 16 member 6 2 4
MIRT450229 PCNX pecanex homolog 1 2 2
MIRT450340 MRPL17 mitochondrial ribosomal protein L17 2 4
MIRT450381 MSI2 musashi RNA binding protein 2 2 2
MIRT450759 PGGT1B protein geranylgeranyltransferase type I subunit beta 2 2
MIRT450809 NRCAM neuronal cell adhesion molecule 2 2
MIRT450947 ATAD2 ATPase family, AAA domain containing 2 2 2
MIRT459095 CCPG1 cell cycle progression 1 2 2
MIRT462428 TWISTNB TWIST neighbor 2 2
MIRT465200 TROVE2 TROVE domain family member 2 2 4
MIRT467382 SON SON DNA binding protein 2 4
MIRT468546 SERP1 stress associated endoplasmic reticulum protein 1 2 2
MIRT471506 PDE4D phosphodiesterase 4D 2 2
MIRT471981 NR3C1 nuclear receptor subfamily 3 group C member 1 2 2
MIRT474478 KLHL11 kelch like family member 11 2 8
MIRT475011 KANSL1 KAT8 regulatory NSL complex subunit 1 2 8
MIRT480341 C5orf51 chromosome 5 open reading frame 51 2 2
MIRT482696 TEX9 testis expressed 9 2 6
MIRT483462 YTHDF1 YTH N6-methyladenosine RNA binding protein 1 2 6
MIRT485623 FAM217B family with sequence similarity 217 member B 2 2
MIRT485714 CASP16 caspase 16, pseudogene 2 8
MIRT486279 SEC23A Sec23 homolog A, coat complex II component 2 2
MIRT491000 PEBP1 phosphatidylethanolamine binding protein 1 2 4
MIRT492594 PPIL4 peptidylprolyl isomerase like 4 2 2
MIRT493365 KIF5B kinesin family member 5B 2 2
MIRT494316 CDKN1B cyclin dependent kinase inhibitor 1B 2 2
MIRT495208 EDN3 endothelin 3 2 2
MIRT497011 TCF15 transcription factor 15 2 2
MIRT498512 FRK fyn related Src family tyrosine kinase 2 2
MIRT498778 PARP15 poly(ADP-ribose) polymerase family member 15 2 2
MIRT501045 SMG1 SMG1, nonsense mediated mRNA decay associated PI3K related kinase 2 6
MIRT502939 CDC37L1 cell division cycle 37 like 1 2 8
MIRT504806 VHL von Hippel-Lindau tumor suppressor 2 6
MIRT505656 SHMT1 serine hydroxymethyltransferase 1 2 6
MIRT505964 RAB5C RAB5C, member RAS oncogene family 2 6
MIRT506322 OTUD4 OTU deubiquitinase 4 2 4
MIRT506803 KLHL15 kelch like family member 15 2 6
MIRT506917 KBTBD8 kelch repeat and BTB domain containing 8 2 4
MIRT507400 EMC7 ER membrane protein complex subunit 7 2 8
MIRT507471 EDEM3 ER degradation enhancing alpha-mannosidase like protein 3 2 6
MIRT508058 ATP13A3 ATPase 13A3 2 4
MIRT508135 AMD1 adenosylmethionine decarboxylase 1 2 2
MIRT509895 RPS23 ribosomal protein S23 2 4
MIRT510881 RAN RAN, member RAS oncogene family 2 8
MIRT513766 PEX5L peroxisomal biogenesis factor 5 like 2 4
MIRT516898 COPS8 COP9 signalosome subunit 8 2 2
MIRT518703 TIMD4 T-cell immunoglobulin and mucin domain containing 4 2 4
MIRT520429 TTPAL alpha tocopherol transfer protein like 2 6
MIRT521843 PNISR PNN interacting serine and arginine rich protein 2 4
MIRT522116 NUDT3 nudix hydrolase 3 2 4
MIRT525467 TMPRSS12 transmembrane protease, serine 12 2 2
MIRT525583 MTRNR2L7 MT-RNR2-like 7 2 2
MIRT525906 BUB1 BUB1 mitotic checkpoint serine/threonine kinase 2 2
MIRT526072 C11orf54 chromosome 11 open reading frame 54 2 2
MIRT526232 MTRNR2L5 MT-RNR2-like 5 2 4
MIRT526455 FAM71F2 family with sequence similarity 71 member F2 2 4
MIRT526515 POU5F1B POU class 5 homeobox 1B 2 2
MIRT528032 FEZ2 fasciculation and elongation protein zeta 2 2 2
MIRT528422 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT528995 ISLR2 immunoglobulin superfamily containing leucine rich repeat 2 2 4
MIRT529311 ATRNL1 attractin like 1 2 2
MIRT529376 SKP1 S-phase kinase associated protein 1 2 4
MIRT530015 SRRM1 serine and arginine repetitive matrix 1 2 2
MIRT530089 FMN2 formin 2 2 2
MIRT530942 ENPP6 ectonucleotide pyrophosphatase/phosphodiesterase 6 2 2
MIRT531229 HIST1H2BD histone cluster 1 H2B family member d 2 2
MIRT533088 YTHDF3 YTH N6-methyladenosine RNA binding protein 3 2 2
MIRT533299 USP46 ubiquitin specific peptidase 46 2 2
MIRT533318 UNKL unkempt family like zinc finger 2 2
MIRT533721 TMEM30A transmembrane protein 30A 2 2
MIRT534096 AZF1 azoospermia factor 1 2 2
MIRT534188 SLC7A11 solute carrier family 7 member 11 2 2
MIRT534493 SAR1B secretion associated Ras related GTPase 1B 2 2
MIRT536077 MBOAT2 membrane bound O-acyltransferase domain containing 2 2 2
MIRT536242 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT537524 FAM104A family with sequence similarity 104 member A 2 2
MIRT538088 DGKH diacylglycerol kinase eta 2 2
MIRT538475 CNBP CCHC-type zinc finger nucleic acid binding protein 2 2
MIRT538853 BTG1 BTG anti-proliferation factor 1 2 4
MIRT539075 GDNF glial cell derived neurotrophic factor 2 2
MIRT539480 ACVR2B activin A receptor type 2B 2 4
MIRT540210 ARHGAP18 Rho GTPase activating protein 18 2 2
MIRT541940 TSPAN2 tetraspanin 2 2 2
MIRT543812 COCH cochlin 2 2
MIRT545120 PDZRN4 PDZ domain containing ring finger 4 2 2
MIRT545571 GIMAP4 GTPase, IMAP family member 4 2 2
MIRT545989 XKR4 XK related 4 2 2
MIRT547213 PANK3 pantothenate kinase 3 2 4
MIRT547740 KIAA1468 KIAA1468 2 2
MIRT548022 GRB2 growth factor receptor bound protein 2 2 4
MIRT548032 GOLIM4 golgi integral membrane protein 4 2 2
MIRT548102 GFPT1 glutamine--fructose-6-phosphate transaminase 1 2 4
MIRT548217 FKBP1A FK506 binding protein 1A 2 2
MIRT548588 DDX3X DEAD-box helicase 3, X-linked 2 4
MIRT548953 CDC27 cell division cycle 27 2 2
MIRT549072 CACUL1 CDK2 associated cullin domain 1 2 2
MIRT550368 INCENP inner centromere protein 2 6
MIRT550546 MYZAP myocardial zonula adherens protein 2 2
MIRT551491 TMEM192 transmembrane protein 192 2 4
MIRT553078 UEVLD UEV and lactate/malate dehyrogenase domains 2 2
MIRT554104 SMU1 DNA replication regulator and spliceosomal factor 2 2
MIRT555127 PTPRG protein tyrosine phosphatase, receptor type G 2 2
MIRT555477 POC1B-GALNT4 POC1B-GALNT4 readthrough 2 2
MIRT555978 NPTN neuroplastin 2 2
MIRT557011 HPRT1 hypoxanthine phosphoribosyltransferase 1 2 2
MIRT557706 GALNT4 polypeptide N-acetylgalactosaminyltransferase 4 2 2
MIRT558333 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 4
MIRT558488 DBN1 drebrin 1 2 2
MIRT559942 ZNF567 zinc finger protein 567 2 2
MIRT561127 ATP2B1 ATPase plasma membrane Ca2+ transporting 1 2 2
MIRT561791 PAWR pro-apoptotic WT1 regulator 2 2
MIRT562438 EEF2 eukaryotic translation elongation factor 2 2 2
MIRT563102 PABPC4L poly(A) binding protein cytoplasmic 4 like 2 2
MIRT563212 ZNF813 zinc finger protein 813 2 2
MIRT563426 KIF3A kinesin family member 3A 2 2
MIRT563473 SPIN4 spindlin family member 4 2 2
MIRT564015 HSPA4 heat shock protein family A (Hsp70) member 4 2 4
MIRT564117 ZYG11B zyg-11 family member B, cell cycle regulator 2 2
MIRT564223 SDE2 SDE2 telomere maintenance homolog 2 2
MIRT564503 CACNG1 calcium voltage-gated channel auxiliary subunit gamma 1 2 2
MIRT564515 DUSP3 dual specificity phosphatase 3 2 2
MIRT564811 ZBTB21 zinc finger and BTB domain containing 21 2 2
MIRT565265 TPD52 tumor protein D52 2 2
MIRT566012 RHOB ras homolog family member B 2 2
MIRT566216 PTMA prothymosin, alpha 2 2
MIRT566638 NFYA nuclear transcription factor Y subunit alpha 2 2
MIRT566821 MAPK8 mitogen-activated protein kinase 8 2 2
MIRT566948 LEPROT leptin receptor overlapping transcript 2 2
MIRT567290 HNRNPAB heterogeneous nuclear ribonucleoprotein A/B 2 2
MIRT567895 CSTF2 cleavage stimulation factor subunit 2 2 2
MIRT568731 MTRNR2L3 MT-RNR2-like 3 2 2
MIRT571263 ZNF239 zinc finger protein 239 2 2
MIRT572593 EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 2 2
MIRT573827 TGOLN2 trans-golgi network protein 2 2 2
MIRT576391 Fhl2 four and a half LIM domains 2 2 2
MIRT609901 SMS spermine synthase 2 2
MIRT613710 ELMSAN1 ELM2 and Myb/SANT domain containing 1 2 2
MIRT614406 ADAT1 adenosine deaminase, tRNA specific 1 2 2
MIRT615042 DCX doublecortin 2 2
MIRT617514 C5orf45 MRN complex interacting protein 2 2
MIRT619476 PRDM10 PR/SET domain 10 2 2
MIRT620349 TLN1 talin 1 2 2
MIRT620910 PLA2G7 phospholipase A2 group VII 2 2
MIRT622131 SP4 Sp4 transcription factor 2 2
MIRT622955 OTUD7B OTU deubiquitinase 7B 2 2
MIRT623351 MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 2 2
MIRT623619 INTU inturned planar cell polarity protein 2 2
MIRT624409 CCDC171 coiled-coil domain containing 171 2 2
MIRT625171 CCS copper chaperone for superoxide dismutase 2 2
MIRT625685 RPP40 ribonuclease P/MRP subunit p40 2 2
MIRT625875 ALDH18A1 aldehyde dehydrogenase 18 family member A1 2 2
MIRT626002 FAM107A family with sequence similarity 107 member A 2 2
MIRT626872 HRH4 histamine receptor H4 2 4
MIRT628220 FKBP9 FK506 binding protein 9 2 2
MIRT628265 DIO2 iodothyronine deiodinase 2 2 2
MIRT628402 C8orf37 chromosome 8 open reading frame 37 2 2
MIRT630564 C3orf36 chromosome 3 open reading frame 36 2 4
MIRT631577 RASSF9 Ras association domain family member 9 2 2
MIRT635730 CCDC58 coiled-coil domain containing 58 2 2
MIRT636224 SLC8A1 solute carrier family 8 member A1 2 2
MIRT636613 CLIC5 chloride intracellular channel 5 2 2
MIRT638899 CDK9 cyclin dependent kinase 9 2 2
MIRT640167 ATXN7L1 ataxin 7 like 1 2 2
MIRT642070 GTDC1 glycosyltransferase like domain containing 1 2 2
MIRT643034 CHCHD7 coiled-coil-helix-coiled-coil-helix domain containing 7 2 2
MIRT644572 SPOP speckle type BTB/POZ protein 2 2
MIRT644954 IFNB1 interferon beta 1 2 2
MIRT645948 TTF2 transcription termination factor 2 2 2
MIRT646440 XRCC2 X-ray repair cross complementing 2 2 2
MIRT647896 EPN2 epsin 2 2 2
MIRT648276 ZNF582 zinc finger protein 582 2 2
MIRT649381 NEDD1 neural precursor cell expressed, developmentally down-regulated 1 2 2
MIRT650254 CD68 CD68 molecule 2 2
MIRT650333 ATP5S ATP synthase, H+ transporting, mitochondrial Fo complex subunit s (factor B) 2 2
MIRT651707 VMP1 vacuole membrane protein 1 2 2
MIRT651774 VASP vasodilator stimulated phosphoprotein 2 2
MIRT653144 SRPK2 SRSF protein kinase 2 2 2
MIRT654112 RPS6KA5 ribosomal protein S6 kinase A5 2 2
MIRT654161 RORB RAR related orphan receptor B 2 2
MIRT655716 MLF2 myeloid leukemia factor 2 2 2
MIRT657476 HDAC4 histone deacetylase 4 2 2
MIRT658095 FOXO1 forkhead box O1 2 2
MIRT658860 DTX3L deltex E3 ubiquitin ligase 3L 2 2
MIRT658988 DNAJA1 DnaJ heat shock protein family (Hsp40) member A1 2 2
MIRT660767 ALDH6A1 aldehyde dehydrogenase 6 family member A1 2 2
MIRT661622 C2orf15 chromosome 2 open reading frame 15 2 2
MIRT661694 TFDP2 transcription factor Dp-2 2 2
MIRT662208 PLA2G4E phospholipase A2 group IVE 2 2
MIRT662443 RALGAPA1 Ral GTPase activating protein catalytic alpha subunit 1 2 2
MIRT664422 ADH5 alcohol dehydrogenase 5 (class III), chi polypeptide 2 2
MIRT687505 NECAB1 N-terminal EF-hand calcium binding protein 1 2 2
MIRT689910 SOD2 superoxide dismutase 2 2 2
MIRT690781 PLA2G2C phospholipase A2 group IIC 2 2
MIRT698488 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT699685 SFMBT2 Scm like with four mbt domains 2 2 2
MIRT700926 PDS5A PDS5 cohesin associated factor A 2 2
MIRT702258 LMNB1 lamin B1 2 2
MIRT703166 GPR137C G protein-coupled receptor 137C 2 2
MIRT703242 GNS glucosamine (N-acetyl)-6-sulfatase 2 2
MIRT704737 CENPQ centromere protein Q 2 2
MIRT707310 GLRX2 glutaredoxin 2 2 2
MIRT710021 KCNQ5 potassium voltage-gated channel subfamily Q member 5 2 2
MIRT712212 SCOC short coiled-coil protein 2 2
MIRT714742 SETBP1 SET binding protein 1 2 2
MIRT718268 ZNF749 zinc finger protein 749 2 2
MIRT720553 DYRK4 dual specificity tyrosine phosphorylation regulated kinase 4 2 2
MIRT722248 RBM41 RNA binding motif protein 41 2 2
MIRT723767 MPLKIP M-phase specific PLK1 interacting protein 2 2
MIRT723977 KIAA0146 scaffolding protein involved in DNA repair 1 1
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-4 Dexamethasone approved 5743 Microarray primary rat thymocytes 20847043 2010 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4282 Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-4282 Neoadjuvant chemotherapy sensitive tissue (breast cancer)
hsa-miR-4282 Neoadjuvant chemotherapy sensitive tissue (breast cancer)

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