pre-miRNA Information
pre-miRNA hsa-mir-3120   
Genomic Coordinates chr1: 172138808 - 172138888
Description Homo sapiens miR-3120 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3120-5p
Sequence 13| CCUGUCUGUGCCUGCUGUACA |33
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 19 1 + 172138838 26449202, 27587585 MiREDiBase
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN26637643 8 COSMIC
COSN31603497 11 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs750386761 8 dbSNP
rs760725207 9 dbSNP
rs766486759 10 dbSNP
rs754055278 12 dbSNP
rs755288536 19 dbSNP
rs754726014 21 dbSNP
Putative Targets

Gene Information
Gene Symbol STAT5A   
Synonyms MGF, STAT5
Description signal transducer and activator of transcription 5A
Transcript NM_003152   
Expression
Putative miRNA Targets on STAT5A
3'UTR of STAT5A
(miRNA target sites are highlighted)
>STAT5A|NM_003152|3'UTR
   1 ATGTTTGAATCCCACGCTTCTCTTTGGAAACAATATGCAATGTGAAGCGGTCGTGTTGTGAGTTTAGTAAGGCTGTGTAC
  81 ACTGACACCTTTGCAGGCATGCATGTGCTTGTGTGTGTGTGTGTGTGTGTGTCCTTGTGCATGAGCTACGCCTGCCTCCC
 161 CTGTGCAGTCCTGGGATGTGGCTGCAGCAGCGGTGGCCTCTTTTCAGATCATGGCATCCAAGAGTGCGCCGAGTCTGTCT
 241 CTGTCATGGTAGAGACCGAGCCTCTGTCACTGCAGGCACTCAATGCAGCCAGACCTATTCCTCCTGGGCCCCTCATCTGC
 321 TCAGCAGCTATTTGAATGAGATGATTCAGAAGGGGAGGGGAGACAGGTAACGTCTGTAAGCTGAAGTTTCACTCCGGAGT
 401 GAGAAGCTTTGCCCTCCTAAGAGAGAGAGACAGAGAGACAGAGAGAGAGAAAGAGAGAGTGTGTGGGTCTATGTAAATGC
 481 ATCTGTCCTCATGTGTTGATGTAACCGATTCATCTCTCAGAAGGGAGGCTGGGGTTCATTTTCGAGTAGTATTTTATACT
 561 TTAGTGAACGTGGACTCCAGACTCTCTGTGAACCCTATGAGAGCGCGTCTGGGCCCGGCCATGTCCTTAGCACAGGGGGG
 641 CCGCCGGTTTGAGTGAGGGTTTCTGAGCTGCTCTGAATTAGTCCTTGCTTGGCTGCTTGGCCTTGGGCTTCATTCAAGTC
 721 TATGATGCTGTTGCCCACGTTTCCCGGGATATATATTCTCTCCCCTCCGTTGGGCCCCAGCCTTCTTTGCTTGCCTCTCT
 801 GTTTGTAACCTTGTCGACAAAGAGGTAGAAAAGATTGGGTCTAGGATATGGTGGGTGGACAGGGGCCCCGGGACTTGGAG
 881 GGTTGGTCCTCTTGCCTCCTGGAAAAAACAAAAACAAAAAACTGCAGTGAAAGACAAGCTGCAAATCAGCCATGTGCTGC
 961 GTGCCTGTGGAATCTGGAGTGAGGGGTAAAAGCTGATCTGGTTTGACTCCGCTGGAGGTGGGGCCTGGAGCAGGCCTTGC
1041 GCTGTTGCGTAACTGGCTGTGTTCTGGTGAGGCCTTGCTCCCAACCCCACACGCTCCTCCCTCTGAGGCTGTAGGACTCG
1121 CAGTCAGGGGCAGCTGACCATGGAAGATTGAGAGCCCAAGGTTTAAACTTCTCTGAAGGGAGGTGGGGATGAGAAGAGGG
1201 GTTTTTTTGTACTTTGTACAAAGACCACACATTTGTGTAAACAGTGTTTTGGAATAAAATATTTTTTTCATAAAAAAAAA
1281 AAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' acaUGUCGUCCGU-------GUCUGUCc 5'
             || |||||||       ||| ||| 
Target 5' gtcACTGCAGGCACTCAATGCAGCCAGa 3'
266 - 293 130.00 -16.52
2
miRNA  3' acaUGUCGUCCGUGUCUGUCc 5'
             |||| ||  ||||| || 
Target 5' gagACAG-AGAGACAGAGAGa 3'
427 - 446 129.00 -13.00
3
miRNA  3' acAUGUCGUCCGUGUCUGUCc 5'
            ||::|::||  ::||||| 
Target 5' gaTATGGTGGG--TGGACAGg 3'
845 - 863 127.00 -16.40
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30106099 28 COSMIC
COSN9222642 91 COSMIC
COSN30134485 97 COSMIC
COSN20113943 130 COSMIC
COSN23393595 132 COSMIC
COSN30171404 151 COSMIC
COSN16303987 545 COSMIC
COSN5416691 549 COSMIC
COSN9669227 579 COSMIC
COSN6104121 738 COSMIC
COSN1719540 752 COSMIC
COSN6548401 939 COSMIC
COSN30538503 1143 COSMIC
COSN31480706 1174 COSMIC
COSN23830214 1192 COSMIC
COSN24981754 1231 COSMIC
COSN24982495 1233 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1333460876 8 dbSNP
rs1303345559 10 dbSNP
rs775604728 12 dbSNP
rs749309701 16 dbSNP
rs538898150 17 dbSNP
rs1323710039 18 dbSNP
rs1169899729 19 dbSNP
rs1246038262 27 dbSNP
rs762262550 32 dbSNP
rs1441455861 33 dbSNP
rs772505608 34 dbSNP
rs951259321 35 dbSNP
rs766958331 36 dbSNP
rs1159235132 37 dbSNP
rs777063940 40 dbSNP
rs773000903 49 dbSNP
rs1174947398 50 dbSNP
rs1257880578 52 dbSNP
rs554089116 53 dbSNP
rs1340472263 54 dbSNP
rs1258932347 56 dbSNP
rs1446446695 63 dbSNP
rs1483186583 67 dbSNP
rs1013254730 72 dbSNP
rs1207308761 72 dbSNP
rs1024676814 78 dbSNP
rs917897949 87 dbSNP
rs969143694 88 dbSNP
rs948030049 89 dbSNP
rs1309334046 110 dbSNP
rs1429818353 110 dbSNP
rs143605021 110 dbSNP
rs3833144 110 dbSNP
rs772130515 110 dbSNP
rs879223491 110 dbSNP
rs980390614 110 dbSNP
rs1218367158 114 dbSNP
rs1369622222 114 dbSNP
rs1045309789 125 dbSNP
rs1474651830 129 dbSNP
rs777633125 130 dbSNP
rs1135670 139 dbSNP
rs904076161 143 dbSNP
rs181352385 150 dbSNP
rs747625509 151 dbSNP
rs1188619731 157 dbSNP
rs1423755576 159 dbSNP
rs1255940348 173 dbSNP
rs1184522803 186 dbSNP
rs958506399 193 dbSNP
rs988422010 196 dbSNP
rs1277276783 200 dbSNP
rs1440676025 212 dbSNP
rs1218658748 217 dbSNP
rs1265839707 220 dbSNP
rs1263761654 223 dbSNP
rs1477385441 226 dbSNP
rs1338635300 227 dbSNP
rs1053027549 228 dbSNP
rs1371559376 229 dbSNP
rs891584778 231 dbSNP
rs540625378 232 dbSNP
rs562063359 235 dbSNP
rs1406759992 248 dbSNP
rs1173294181 250 dbSNP
rs574037720 255 dbSNP
rs1164202223 257 dbSNP
rs898270356 258 dbSNP
rs1416415935 259 dbSNP
rs1433445650 265 dbSNP
rs933480101 270 dbSNP
rs890798048 273 dbSNP
rs1251218728 290 dbSNP
rs1179695010 296 dbSNP
rs140241394 301 dbSNP
rs3198502 308 dbSNP
rs533340922 309 dbSNP
rs1332381842 311 dbSNP
rs943463812 317 dbSNP
rs1228959003 320 dbSNP
rs1328328369 325 dbSNP
rs771678248 326 dbSNP
rs1277279180 327 dbSNP
rs1437902563 334 dbSNP
rs962585761 337 dbSNP
rs1331393919 338 dbSNP
rs1322460697 348 dbSNP
rs1386615347 353 dbSNP
rs995373734 354 dbSNP
rs1038089562 359 dbSNP
rs899184171 360 dbSNP
rs183951270 368 dbSNP
rs951524314 369 dbSNP
rs887063959 372 dbSNP
rs188976840 373 dbSNP
rs115942147 374 dbSNP
rs1286667303 381 dbSNP
rs904932829 393 dbSNP
rs969365148 396 dbSNP
rs980706521 397 dbSNP
rs116288652 405 dbSNP
rs936924468 406 dbSNP
rs957733212 410 dbSNP
rs1220512987 415 dbSNP
rs181374973 418 dbSNP
rs1273920511 419 dbSNP
rs1453591078 419 dbSNP
rs1322987724 420 dbSNP
rs1436191314 420 dbSNP
rs187568556 420 dbSNP
rs56975429 420 dbSNP
rs1199813417 422 dbSNP
rs374882566 424 dbSNP
rs772616383 424 dbSNP
rs571349157 426 dbSNP
rs1425997457 428 dbSNP
rs1172018204 432 dbSNP
rs1452821413 432 dbSNP
rs910749041 436 dbSNP
rs1189050270 440 dbSNP
rs1448629034 440 dbSNP
rs943411415 440 dbSNP
rs80291237 442 dbSNP
rs78837207 446 dbSNP
rs1452688878 447 dbSNP
rs1160474848 448 dbSNP
rs1442894623 450 dbSNP
rs1277329664 452 dbSNP
rs1381483231 452 dbSNP
rs973526909 456 dbSNP
rs1297877571 457 dbSNP
rs920558330 464 dbSNP
rs1051306184 465 dbSNP
rs890839241 469 dbSNP
rs1419625266 473 dbSNP
rs1361656700 480 dbSNP
rs1268743171 490 dbSNP
rs1006568299 496 dbSNP
rs115456777 507 dbSNP
rs1393283077 508 dbSNP
rs377109752 509 dbSNP
rs1372701804 517 dbSNP
rs887013108 521 dbSNP
rs949326328 528 dbSNP
rs1417170408 535 dbSNP
rs898454082 543 dbSNP
rs554052709 545 dbSNP
rs1185254188 547 dbSNP
rs905045899 552 dbSNP
rs1025530932 563 dbSNP
rs1002325486 570 dbSNP
rs1448356971 571 dbSNP
rs951309830 576 dbSNP
rs1271338174 578 dbSNP
rs1230320581 582 dbSNP
rs1380611244 583 dbSNP
rs546581419 585 dbSNP
rs1413064330 598 dbSNP
rs145320932 599 dbSNP
rs1308673823 600 dbSNP
rs1013382955 604 dbSNP
rs1025490201 605 dbSNP
rs1352923238 606 dbSNP
rs893588382 607 dbSNP
rs1352973709 608 dbSNP
rs113443901 617 dbSNP
rs536557727 618 dbSNP
rs1180751921 635 dbSNP
rs1251929758 635 dbSNP
rs1356824013 636 dbSNP
rs766189141 637 dbSNP
rs925271276 638 dbSNP
rs958309757 640 dbSNP
rs1322673546 641 dbSNP
rs555761237 643 dbSNP
rs988809525 644 dbSNP
rs1331779226 646 dbSNP
rs1017758539 647 dbSNP
rs1390830224 648 dbSNP
rs1439661803 650 dbSNP
rs1295495535 654 dbSNP
rs1436996102 671 dbSNP
rs1393492207 675 dbSNP
rs573972370 683 dbSNP
rs1157589100 684 dbSNP
rs964882906 699 dbSNP
rs1370651293 705 dbSNP
rs914133116 712 dbSNP
rs920682305 716 dbSNP
rs1391917569 721 dbSNP
rs1057935 724 dbSNP
rs1191381575 725 dbSNP
rs1487931978 736 dbSNP
rs776217451 738 dbSNP
rs1212151382 739 dbSNP
rs1466850155 740 dbSNP
rs987622500 743 dbSNP
rs1269319294 746 dbSNP
rs1315184623 749 dbSNP
rs983451717 749 dbSNP
rs1303735737 757 dbSNP
rs1220053420 763 dbSNP
rs1370446952 764 dbSNP
rs1323647164 765 dbSNP
rs1331500837 768 dbSNP
rs1389360212 769 dbSNP
rs1375481945 770 dbSNP
rs1451045437 775 dbSNP
rs917265742 776 dbSNP
rs73983709 782 dbSNP
rs1046305002 783 dbSNP
rs904993468 788 dbSNP
rs769143524 795 dbSNP
rs937854686 796 dbSNP
rs1340935112 800 dbSNP
rs1257843475 801 dbSNP
rs942423840 807 dbSNP
rs1039416779 811 dbSNP
rs1054064509 817 dbSNP
rs1347512470 822 dbSNP
rs1243806761 823 dbSNP
rs1263456080 831 dbSNP
rs1333042751 850 dbSNP
rs562826364 852 dbSNP
rs1200723615 859 dbSNP
rs1294535553 861 dbSNP
rs898177520 865 dbSNP
rs893546274 866 dbSNP
rs1380481483 869 dbSNP
rs930972272 870 dbSNP
rs578078183 871 dbSNP
rs1433558994 881 dbSNP
rs1373303806 883 dbSNP
rs1042054590 884 dbSNP
rs1047425906 887 dbSNP
rs890140523 892 dbSNP
rs1457384509 904 dbSNP
rs1427258563 910 dbSNP
rs1009120579 912 dbSNP
rs886997622 919 dbSNP
rs1175496754 933 dbSNP
rs537540280 945 dbSNP
rs1017873051 949 dbSNP
rs1278506779 950 dbSNP
rs1024763145 954 dbSNP
rs1340262161 961 dbSNP
rs965372102 962 dbSNP
rs1224885389 970 dbSNP
rs556315173 971 dbSNP
rs1313332955 976 dbSNP
rs117202666 985 dbSNP
rs1352992163 993 dbSNP
rs1416117305 1000 dbSNP
rs1309279065 1001 dbSNP
rs1410064630 1005 dbSNP
rs1028261868 1026 dbSNP
rs560317850 1029 dbSNP
rs527940414 1032 dbSNP
rs983954912 1036 dbSNP
rs1166244908 1041 dbSNP
rs1370750215 1041 dbSNP
rs549283356 1042 dbSNP
rs137952621 1045 dbSNP
rs1304014411 1047 dbSNP
rs1438614777 1049 dbSNP
rs764347941 1050 dbSNP
rs988118264 1052 dbSNP
rs1358176504 1054 dbSNP
rs371020166 1070 dbSNP
rs954975482 1075 dbSNP
rs751791627 1085 dbSNP
rs937956461 1086 dbSNP
rs1228464321 1087 dbSNP
rs1291250786 1091 dbSNP
rs1326416406 1100 dbSNP
rs1390066581 1101 dbSNP
rs1342173959 1104 dbSNP
rs1393367005 1104 dbSNP
rs988084241 1109 dbSNP
rs1218959185 1111 dbSNP
rs910704930 1114 dbSNP
rs1489650683 1115 dbSNP
rs1416245438 1116 dbSNP
rs1161548455 1120 dbSNP
rs757355676 1121 dbSNP
rs1053610708 1123 dbSNP
rs1179888409 1126 dbSNP
rs915080507 1127 dbSNP
rs1253423592 1129 dbSNP
rs781630618 1130 dbSNP
rs1042168491 1150 dbSNP
rs1307068162 1153 dbSNP
rs1205253658 1157 dbSNP
rs1202603599 1159 dbSNP
rs1277223113 1162 dbSNP
rs1234987225 1180 dbSNP
rs1371201838 1184 dbSNP
rs374043277 1200 dbSNP
rs1440625137 1201 dbSNP
rs1392991395 1202 dbSNP
rs975179055 1202 dbSNP
rs1257818183 1203 dbSNP
rs1384392877 1212 dbSNP
rs1156845850 1213 dbSNP
rs1483892121 1216 dbSNP
rs1200354916 1217 dbSNP
rs111430874 1231 dbSNP
rs1008565603 1238 dbSNP
rs1038747297 1248 dbSNP
rs549785396 1252 dbSNP
rs1249861494 1253 dbSNP
rs1216446585 1259 dbSNP
rs1446304592 1261 dbSNP
rs776587800 1261 dbSNP
rs765299038 1262 dbSNP
rs900733832 1262 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084079. RNA binding protein: AGO2. Condition:CLIP_hippuristanol_rep2_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' acaugucguccgUGUCUGUCc 5'
                      ||||| || 
Target 5' ------------ACAGAGAGa 3'
1 - 9
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM4903834
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_b
Location of target site NM_003152 | 3UTR | ACAGAGAGACAGAGA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903837
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_b
Location of target site NM_003152 | 3UTR | ACAGAGAGACAGAGA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM4903838
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_c
Location of target site NM_003152 | 3UTR | ACAGAGAGACAGAGA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM1084079
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_hippuristanol_rep2_AbnovaAb
Location of target site ENST00000345506.4 | 3UTR | ACAGAGAGAGAGAAAGAGAGAGUGUGU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
134 hsa-miR-3120-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT096972 BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB 2 2
MIRT442624 LOX lysyl oxidase 2 2
MIRT473438 MDM4 MDM4, p53 regulator 2 2
MIRT490011 KIFC2 kinesin family member C2 2 2
MIRT496449 N6AMT1 N-6 adenine-specific DNA methyltransferase 1 2 2
MIRT496752 TGIF2 TGFB induced factor homeobox 2 2 2
MIRT497721 CYP1A1 cytochrome P450 family 1 subfamily A member 1 2 2
MIRT498287 PADI3 peptidyl arginine deiminase 3 2 2
MIRT503195 ACVR1B activin A receptor type 1B 2 4
MIRT504760 TEP1 telomerase associated protein 1 2 4
MIRT517810 UGDH UDP-glucose 6-dehydrogenase 2 6
MIRT519686 ZNF622 zinc finger protein 622 2 4
MIRT520263 URGCP upregulator of cell proliferation 2 2
MIRT523051 ICMT isoprenylcysteine carboxyl methyltransferase 2 2
MIRT525601 OLR1 oxidized low density lipoprotein receptor 1 2 4
MIRT526995 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT528699 TRAF3IP2 TRAF3 interacting protein 2 2 4
MIRT533142 WNT10A Wnt family member 10A 2 2
MIRT537618 ERI1 exoribonuclease 1 2 2
MIRT539707 EIF3H eukaryotic translation initiation factor 3 subunit H 2 2
MIRT539752 CNBP CCHC-type zinc finger nucleic acid binding protein 2 2
MIRT539808 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT539941 IFNAR2 interferon alpha and beta receptor subunit 2 2 2
MIRT540424 FAM83F family with sequence similarity 83 member F 2 2
MIRT540509 CXCL10 C-X-C motif chemokine ligand 10 2 2
MIRT540720 GUF1 GUF1 homolog, GTPase 2 2
MIRT541630 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT542286 POLR3K RNA polymerase III subunit K 2 2
MIRT542456 AKR7A2 aldo-keto reductase family 7 member A2 2 2
MIRT542550 MRPS10 mitochondrial ribosomal protein S10 2 2
MIRT542771 PPAP2B phospholipid phosphatase 3 2 2
MIRT550085 TRAPPC2 trafficking protein particle complex 2 2 2
MIRT551458 CARKD NAD(P)HX dehydratase 2 2
MIRT555622 PHLPP2 PH domain and leucine rich repeat protein phosphatase 2 2 2
MIRT569136 KATNAL1 katanin catalytic subunit A1 like 1 2 2
MIRT572328 HSPB6 heat shock protein family B (small) member 6 2 2
MIRT574607 LZIC leucine zipper and CTNNBIP1 domain containing 2 2
MIRT575583 Mcm8 minichromosome maintenance 8 homologous recombination repair factor 2 4
MIRT576125 Hrk harakiri, BCL2 interacting protein (contains only BH3 domain) 2 5
MIRT576657 Fam216a family with sequence similarity 216, member A 2 2
MIRT607222 ACSM2A acyl-CoA synthetase medium chain family member 2A 2 4
MIRT607292 CD300E CD300e molecule 2 6
MIRT607746 ANGPT4 angiopoietin 4 2 2
MIRT607905 SPRYD4 SPRY domain containing 4 2 2
MIRT608159 HRK harakiri, BCL2 interacting protein 2 7
MIRT608657 ABCF3 ATP binding cassette subfamily F member 3 2 4
MIRT609115 ZNF703 zinc finger protein 703 2 6
MIRT610231 ACOT9 acyl-CoA thioesterase 9 2 2
MIRT610870 NUDCD3 NudC domain containing 3 2 2
MIRT611217 MC2R melanocortin 2 receptor 2 2
MIRT614858 PLEKHA6 pleckstrin homology domain containing A6 2 2
MIRT616966 LMX1A LIM homeobox transcription factor 1 alpha 2 2
MIRT617258 GLIPR1L2 GLI pathogenesis related 1 like 2 2 2
MIRT618009 SLC9A3R2 SLC9A3 regulator 2 2 2
MIRT619067 BSND barttin CLCNK type accessory beta subunit 2 4
MIRT619295 FAM26E calcium homeostasis modulator family member 5 2 2
MIRT619348 GINM1 glycoprotein integral membrane 1 2 2
MIRT619362 CFHR5 complement factor H related 5 2 2
MIRT619541 PIWIL2 piwi like RNA-mediated gene silencing 2 2 2
MIRT619782 NRIP2 nuclear receptor interacting protein 2 2 2
MIRT619994 NPAP1 nuclear pore associated protein 1 2 2
MIRT621030 CDC14B cell division cycle 14B 2 2
MIRT622033 STAT5A signal transducer and activator of transcription 5A 2 2
MIRT622728 PITPNM3 PITPNM family member 3 2 2
MIRT623144 NAV2 neuron navigator 2 2 2
MIRT623600 IPO9 importin 9 2 2
MIRT624608 B3GALT5 beta-1,3-galactosyltransferase 5 2 2
MIRT624905 CTCFL CCCTC-binding factor like 2 2
MIRT625030 SPC24 SPC24, NDC80 kinetochore complex component 2 2
MIRT625688 MCM8 minichromosome maintenance 8 homologous recombination repair factor 2 5
MIRT626531 EMCN endomucin 2 2
MIRT627204 ZDHHC20 zinc finger DHHC-type containing 20 2 2
MIRT628033 LSAMP limbic system-associated membrane protein 2 2
MIRT628203 FREM2 FRAS1 related extracellular matrix protein 2 2 2
MIRT631012 LINS lines homolog 1 2 2
MIRT633195 HSPE1-MOB4 HSPE1-MOB4 readthrough 2 2
MIRT633890 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT634023 MOB4 MOB family member 4, phocein 2 2
MIRT634416 PLCXD3 phosphatidylinositol specific phospholipase C X domain containing 3 2 2
MIRT636866 ARSE arylsulfatase E (chondrodysplasia punctata 1) 2 2
MIRT642527 ANKRD9 ankyrin repeat domain 9 2 2
MIRT645408 FAM110A family with sequence similarity 110 member A 2 2
MIRT645635 SYTL4 synaptotagmin like 4 2 2
MIRT646013 TNFAIP8L2 TNF alpha induced protein 8 like 2 2 2
MIRT646686 ASGR2 asialoglycoprotein receptor 2 2 2
MIRT652838 TACO1 translational activator of cytochrome c oxidase I 2 2
MIRT655156 PHF21B PHD finger protein 21B 2 2
MIRT658491 EXOC7 exocyst complex component 7 2 2
MIRT659398 CORO2A coronin 2A 2 2
MIRT666825 PRCP prolylcarboxypeptidase 2 2
MIRT666866 POU2F2 POU class 2 homeobox 2 2 2
MIRT668224 GABRA1 gamma-aminobutyric acid type A receptor alpha1 subunit 2 2
MIRT673288 PDE3A phosphodiesterase 3A 2 2
MIRT673878 KLF2 Kruppel like factor 2 2 2
MIRT681721 KCNE4 potassium voltage-gated channel subfamily E regulatory subunit 4 2 2
MIRT682406 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT684109 MCM10 minichromosome maintenance 10 replication initiation factor 2 2
MIRT684423 TUFT1 tuftelin 1 2 2
MIRT684684 OR7D2 olfactory receptor family 7 subfamily D member 2 2 2
MIRT686638 TMEM184C transmembrane protein 184C 2 2
MIRT689457 NXN nucleoredoxin 2 2
MIRT689627 NAA30 N(alpha)-acetyltransferase 30, NatC catalytic subunit 2 2
MIRT690773 PLA2G2C phospholipase A2 group IIC 2 2
MIRT690822 SGSM2 small G protein signaling modulator 2 2 2
MIRT693669 MXRA7 matrix remodeling associated 7 2 2
MIRT695553 CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 2 2
MIRT695872 C19orf52 translocase of inner mitochondrial membrane 29 2 2
MIRT698160 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT699933 RUFY2 RUN and FYVE domain containing 2 2 2
MIRT708639 UBE2W ubiquitin conjugating enzyme E2 W 2 2
MIRT710816 RAB11FIP4 RAB11 family interacting protein 4 2 2
MIRT711242 TRAT1 T-cell receptor associated transmembrane adaptor 1 2 2
MIRT711542 MSH3 mutS homolog 3 2 2
MIRT711749 DTX1 deltex E3 ubiquitin ligase 1 2 2
MIRT712303 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT712922 RPF2 ribosome production factor 2 homolog 2 2
MIRT714027 SYDE2 synapse defective Rho GTPase homolog 2 2 2
MIRT714768 TERF1 telomeric repeat binding factor 1 2 2
MIRT714844 ADAMTS17 ADAM metallopeptidase with thrombospondin type 1 motif 17 2 2
MIRT715223 NPVF neuropeptide VF precursor 2 2
MIRT716110 GMPS guanine monophosphate synthase 2 2
MIRT716174 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT716383 C6orf223 chromosome 6 open reading frame 223 2 2
MIRT716527 KSR2 kinase suppressor of ras 2 2 2
MIRT716962 P2RY6 pyrimidinergic receptor P2Y6 2 2
MIRT717605 DSTYK dual serine/threonine and tyrosine protein kinase 2 2
MIRT717696 PTGS1 prostaglandin-endoperoxide synthase 1 2 2
MIRT721360 ENTHD1 ENTH domain containing 1 2 2
MIRT721381 MACC1 MACC1, MET transcriptional regulator 2 2
MIRT721935 RASSF2 Ras association domain family member 2 2 2
MIRT722094 SUSD1 sushi domain containing 1 2 2
MIRT722837 C17orf102 chromosome 17 open reading frame 102 2 2
MIRT722990 TOR1A torsin family 1 member A 2 2
MIRT724174 ABCF2 ATP binding cassette subfamily F member 2 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-3120-5p Cisplatin 5460033 NSC119875 approved sensitive cell line
hsa-miR-3120-5p Prednisone/Azathioprine/Methotrexate/Cyclophosphamide/Mycophenolate mofetil sensitive tissue (myasthenia gravis)
hsa-miR-3120-5p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)

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