Gene Symbol |
CAMK2N1
|
Synonyms |
PRO1489 |
Description |
calcium/calmodulin dependent protein kinase II inhibitor 1 |
Transcript |
NM_018584
|
Expression |
|
Putative miRNA Targets on CAMK2N1 |
|
3'UTR of CAMK2N1 (miRNA target sites are highlighted) |
>CAMK2N1|NM_018584|3'UTR
1 CTCCCCCAAAGACAATGAGTTAAGGGAGAGAATAAGAACGGCGGTAACAGTTATTGGCAAAAAGCATGAAAAGAGAAAGC
81 ACTTTGAAATTTATTACTAGCTTGCTACCCACGATGAAATCAACAACCTGTATCTGGTATCAGGCCGGGAGACAGATGAG
161 GCGAGAGGAGGAGGAGGAGGAGGAGAAGGCTCTGGGCTCCTCTGCAAAAATAAAAATAAAAAAATAAATAAAATTTTAAA
241 AATAATAAAAATTCACTATATACACATATAAAGAAATAAAAAGAAGTCTCAGTTGCAGCTATTTGTCAAAATTAATATCC
321 ATTTCTTTTTATATACGGTGAATATTGCGCAATTATAGATCTGGATTTTGAACCACTTAATGAAGCGGCAACACCAGGTG
401 TTTTGAGGTGTTGGCATTCTTCGCTGATTTGGCTGTTCCCAATGTTTACATTATTTAATCTTGCAAAAATGGTTCTGTGC
481 ACTTGGATGTGAAATGCTGTCCAGTTTTATTTTTTTTATGTTGTTATCCTTGGATGTACAAAAAATTCAGAAAATGATCT
561 CTGTAGATATTCTGTTTTATTTTGGTCATCTTTAGAAGTTATCAGGAATGTGTTTAAAACAAGAAGAGAACTTTTCTAAG
641 GAATGATACATAGAAAAGATTTTATTTTAAAATGAGTTGTAAAGCTTGTGTTTCTTTGTTGCTGCAAGCTATCTGCCCAA
721 GTTAATGCAAATGGACACATTTTTTATGTCAGAAAAACACACACACACACACACACACACACACACACACACGAAAAACA
801 AAGAAAAAAATGCTTGAGCTTTTTCTAACTTCCCCTTGCAGTCTGTTGTGTGAGCAGCCTGTTTATTTCTCTAATATTAT
881 GTCAGTTTATTCTCTTTAATGGACTGTAAAAAAATGTAATCACAAGAGTGCCAAATATCTTGAAATGCCAAAAGGCATTT
961 TAGTTTCTTTTCTCTGTGCTCTGAGTCCACGTACAGGAATGCTTGGAGTGTCTTTTCTGTTATTTATAGGGATTCTCTTA
1041 AGGCACACCAGCTGCCTGTTTTGCATGGTATTTGCAAAAATGCCTCTTGCGTGAGGAAATCTTTTACCATTTTTTGTTTG
1121 CAACTTTGGACCTCAAGAGGTTTCCCTTCCCTTCCCCGTTCCCTCTTTTCTTAATTCAATATTCTGTATGTTGCACCTTG
1201 AACCAGCACACAGGGCTATTTCTCCAATGTACAATAAAAGAATTGTTCCTGTGTCTCAAAAAAAAAAAAAAAAAAAAA
Target sites
Provided by authors
Predicted by miRanda
DRVs
SNPs
DRVs & SNPs
|
miRNA-target interactions (Predicted by miRanda) |
ID |
Duplex structure |
Position |
Score |
MFE |
1
|
miRNA 3' gauaccCACCCUGUCU-CUCCc 5'
| | |||||| ||||
Target 5' caggccGGGAGACAGATGAGGc 3'
|
141 - 162
|
127.00 |
-18.30 |
2
|
miRNA 3' gaUACCCA---CCCUGUCUCUccc 5'
||| || ||| |||||
Target 5' caATGAGTTAAGGG--AGAGAata 3'
|
13 - 34
|
115.00 |
-9.06 |
3
|
miRNA 3' gauacCCACC-CUGUCU-CUCCc 5'
|| || |: :|| ||||
Target 5' cgagaGGAGGAGGAGGAGGAGGa 3'
|
162 - 184
|
104.00 |
-15.80 |
|
DRVs in gene 3'UTRs |
|
SNPs in gene 3'UTRs |
|