Gene Symbol |
B3GALT5
|
Synonyms |
B3GalT-V, B3GalTx, B3T5, GLCT5, beta-1,3-GalTase 5, beta-3-Gx-T5, beta3Gal-T5 |
Description |
beta-1,3-galactosyltransferase 5 |
Transcript |
NM_006057
|
Other Transcripts |
NM_033170
,
NM_033171
,
NM_033172
|
Expression |
|
Putative miRNA Targets on B3GALT5 |
|
3'UTR of B3GALT5 (miRNA target sites are highlighted) |
>B3GALT5|NM_006057|3'UTR
1 GGGGAGCCCAGAGGCACATCCGGACAAGTTTCAGATAACCCGTGGGGATAGTTTTTGCTAGATTTTGGAAGAGGGGGCGG
81 GACAGAGGATGCTGTTCTTCAGTGCTGAAATCCACGCCAGAATGTCGGTGTTCATGAAGTCACTGATTAGTTCCCACTTG
161 GTGCCCCAGGCAATAATAGGCCCGTCTCTTGGGCACGCACACTCTTCATACTAAGTGTTTGACATACACCTGGATTTTTG
241 CATTTCAGGGGTCAGTATCCTATGACATGATGGGTGTTACCATCCTAATTTTACAGGCAAGGACACAGCAGCTGCGAGAG
321 GTACAGAAACTTGTCCCAAGGCTCACAGCCAGTAGGCATAGGAGCGGGAATGAAAATCGAGCACTGTCAGAATCTGGTGG
401 GCAGCCCCTGACTTGAACCACTCCCACGTGCTGCCTCCCTTAGGAGGGGACACTGATGATGAGGTCTCGGAGCCGGCATC
481 CTTCCATCCCTGTCGAGTCCCCTCCACCTCAGCTCCCAGTCCTTGTGCTTTTTGGAGCTAAGCCTGGGATGACCAAATTC
561 ACCCCAGCTCCTTCATTCACAGGGCTGGATGTAGCTGGGATTGAGTCCATGTTATCGGCTCGGTACTCAACACAACCCAA
641 GTTTCATCCGAGGAAATGTCCCCGCAGTGGATGCAGCTCACATGCTGAGGAACACCCAGCTCTGGACAGAGTTCTTATAA
721 ATGTATAAATTAGGCTCAGAAACCACTGCATTCTGACCTGCTGTACAGACTGCCCACACTGCTGACCTGCCTAGCGAGCA
801 GGACATCCCTTCTGAGCCATCTGCTGCTCTCTCATTTCATCACCCCAACTGTCCCTTGTTTTTGATCAATGGGGACCAGC
881 CACTGCCCCAGGAGCACTTTAGGGCTCTCAGTTCAAACTGAAGGACAGTTGAACTCAGATGGGGTTCATGTGGGATTCTG
961 GGAGCTTTCTGGGAATTCAGTTGGAGTCAAGTCAGGATGCTCTCAAGGACCCCTCGGGCTCAGAGCCCTAAAGTGGGCCC
1041 TGGTGAAGCAGGGTGGTCCTGCGTCCACTTCCCAAGCCTGAGCCAAGCTCATCTTCATTGAATGTCTCATTTGGCCGAGG
1121 AACAACTGAACTTTGTGGTTTGCTGTTTAGCCTTCAGTTTGCTCCGCTGCCTCCTACCCAGAGGTTTGTGCGAGCCTGTG
1201 TTGCAGGGTTGTATAAAACCAAGGTACTTCGTTAGTTTTGCCCATTCAGCCATGGTCACGTGACATGCAAAGTAATCTTG
1281 CTCCTAATTATAGAAATGATTTTTCTTTTAATTTTTTACTTTACCAGACTTTACTTTGTACTCAGAGAAGAGGCCTCACA
1361 TGGCTGTGTCACATATAAATGTTGGACTAAACTCTTAAAAAAAAAAAAAAAAA
Target sites
Provided by authors
Predicted by miRanda
DRVs
SNPs
DRVs & SNPs
|
miRNA-target interactions (Predicted by miRanda) |
ID |
Duplex structure |
Position |
Score |
MFE |
1
|
miRNA 3' acaugucgUCC--GUGUCUGUCc 5'
||| ||||| |||
Target 5' ttgtcccaAGGCTCACAGCCAGt 3'
|
331 - 353
|
123.00 |
-11.30 |
2
|
miRNA 3' acauGUCGUCCGU----GUCUGUcc 5'
||| ||||| |:||||
Target 5' agccCAG-AGGCACATCCGGACAag 3'
|
5 - 28
|
122.00 |
-16.50 |
3
|
miRNA 3' acaUGU-CGUCCGUGUCUGUCc 5'
||| ||| : ::|||||
Target 5' ggaACACCCAGCTCTGGACAGa 3'
|
689 - 710
|
122.00 |
-11.00 |
|
DRVs in gene 3'UTRs |
|
SNPs in gene 3'UTRs |
|