pre-miRNA Information
pre-miRNA hsa-mir-1273h   
Genomic Coordinates chr16: 24203116 - 24203231
Description Homo sapiens miR-1273h stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-1273h-5p
Sequence 33| CUGGGAGGUCAAGGCUGCAGU |53
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1028034199 14 dbSNP
rs542383563 18 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol SMAD9   
Synonyms MADH6, MADH9, PPH2, SMAD8, SMAD8/9, SMAD8A, SMAD8B
Description SMAD family member 9
Transcript NM_001127217   
Other Transcripts NM_005905   
Expression
Putative miRNA Targets on SMAD9
3'UTR of SMAD9
(miRNA target sites are highlighted)
>SMAD9|NM_001127217|3'UTR
   1 CAGTCATGTCTTAAGCTGCATTTCCATAGGATAGAGGCTATTGCAGGGAGTGGCTTGTATCATTTCAGATTTGCAACTGA
  81 AGTTTCTAAAAACATGTGTAAATACATAGAATGTATACTGTTCTTATTTTTTTTAATCACCGTTTGTTTTGTGCTTTCTA
 161 GTTAACCTGATGCCAGTACAGTGCAATTGGAAAAGCAGGACTTTGGTGCCTGTGCTATAAGCAGCAGATTTTGTGGGAGG
 241 AAACACTTGAGAGGCGATATTGTCAACAGTATTTGAAGGGTGTTAGCAGAATAAAAGACAGCTTTAGTCAGCCGTGTCAT
 321 TATAAAGCATGTTGTGTGGCCTCACAGAAACATTGAAACTGTTTATACAGCAAAAGTCAGGTATTAGCAGCACTAAAGCA
 401 AATATCACTCAGATGAAACAAAGCAGTGAAACCCCTACAGTTTAAATGATGTCACTTTTAGTGCTGTTGGCAAGAAAAAA
 481 AAAACAACAAACTTGTACAATGAATTAATGAGATAGGCCATAGAAACTTTATTTCTAAGGTTGACATACCTATAGCTGGG
 561 CTCCTGTGCTCATATTCAGTGGTACATTTTAAACAAACTGTGATCGGAAAAGAAAAAAAACTGTGAAGCCAAAAGTCATG
 641 TTCCCTCAGTCTACCACTGTAAAAACAGAGTCTAATATGGGAAAATAAATATGAAAATAGCATGAAATGCTGTTTCCCAG
 721 ATTGCAAGATAAGACCAGAACTTGGTCCAAGAGCCAGCCACCCAGGGAGACTCCTGCTTTCCACAGAGGAGACCAGGTTC
 801 CTGTCGTGCTGGTTGTTCGTGTCAGGCAGTCCTGCAAACTTTGAGTCTGCGCAGCGTGCCAGAATAGCTTGTGTTTCAGT
 881 CCTGTGTCAAGAAGCAGGTGAAACCAAAGGTTGGAGAAAAGCATCACACGTCGACTTACACTTTCTCATTTCCCACGTTC
 961 CAGTCTCCTGGGAAGGGCACTCTTTCGCCACGTTTTCCTGCCTCTTGGCAAATATTAACTCTTTGCAGATCACTAAAGCA
1041 ACAGTAAAGACTTTGAGAAAATCTAGACACATTATTGGATCAATGAGTTATTTAACCTAGTGTCTAGTGATTATCTAACC
1121 TGGAAATAAATTCCCAAGGAAAGTGATAATAATTTCATAATCATCTGCAATTTCTGGGGAACAGTGGTACTGAATAATAA
1201 GACATCTTTTAAAAATATACACAATATTAAAAACCTGTTCTTATTTTACTTTAGATGAGGGAGGAAAATCCCCCAAATTT
1281 CTAGGTACTTTCATATATATACTTGCCATGCACTAAACACTGCATTGCTTGGAAAAATATTTCACACCCTCTTTAAAAAT
1361 GTACAATTTAAGATGGCAGTTATGCTTGTAACAGACAGCACTTCAGTAATCCAAGAAGTTTCTTCATTTATACATTTTAT
1441 CTCAACTCTTTCTAGCATTAGTGCACATGGTAGTTTTTCTAATTAAATTGTATTCAAGGTAGAAATGATCATGTGAGAAA
1521 GATATATGATTGAGCTACTACTGTCACCTCTTACAGTTACTAGTGTTAGCTAATAGAAACTTTCATATATACACATAGAA
1601 AAGAATTATTACATTTTACATTGAAAAATGTAATATATGGCCCATGTAGTGTATAGAAAAATCTGTAGTTTATTGGTTCA
1681 TCAACTATGTATTGTGCACCTACCTATGGGTGTCAGGTACAATGTTAGGTACTGTAGAATCAAATGTAAATAAGAGACAG
1761 TCCCAGCCCTCAGGGAGCCGAGAACCTAATAGTGAATCTGTTTGTACAGACATCTTCATGTTTCAGAACTTTTAAAACAA
1841 AACAAAATAATGTAATCTATCATCTTTTGCTTGAAAGAATGTGATTGATTTCTTATCTCTGTTTTGAAATTATTTCCTTA
1921 CTCTTCTGCAAAGTCAGGTAATGGATTCCTTGTATAAATGCTACTTTTCTTCCATGTCTCAAAGTTGTTTTTTTTCCTCC
2001 CCTTTCTTCCCTGTTTTCCAATAATTCTCCATGTCCCCTTTTCTTAGAAAAGGCATTAATATGGTGAATCTTGTATGGGA
2081 ACCATTCCATGGGAGAACTTCAACACAGTTTTTGCTCCAGAGATCAAACATAGCTTTCGTGATCTCTCTACCAGCTATCT
2161 AACTTATCCTCTGGTAATCTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTGTGTCACCAGGCCAGAGTGCAG
2241 TGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCCGGGTTCGAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGTTGGGA
2321 CTACAGGCTACCACGCCCAGCTAATTTTTATATTTTTAGTAGAGACGGGGTTTCACCATGGTAGCCAGAATGGTCTCTAT
2401 CTCTTGACCTTGTGATCCGCCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCCGGCTTCCTC
2481 TGGTAATCTTACACCTTTACAGAATTAATCTAAACTGGTGGCTCATAAATGACATTAAAAACAAAAAAAAAATCTGGATG
2561 CAGTGGCTCATTCCTATAGTCCCAGCACTTTGGGAGGCCAAGGCGGGAGGATCATCTGAGCCCAGGAGTTTGGGGCTGTA
2641 GTGAACTATGATCATACAACTTCATTCTAGCCTGGGTGACAAAGTGACACCCTGTCTCTAAACAAAAATCAAGAAACAAA
2721 AAACTTGTATTTCCCTGCAGCTTTGGGAAGCCAGAACACAATATTGCAGTGAATCTGAATTTTCTGTGACAAATAAATTA
2801 TTAAATTGGCACATATGATCATCACCAGTCATGTCTCATCAAAAGCCTTTATTATGATGCTTGTACATTTTGAAGAATTT
2881 AGAATTAATGAGAAGTTAACCCTTTAGTCATTGTAACACAATCATATTTTAATCAGCTTTTTCTTTTGCTACCAAGAGTT
2961 TCAAAAAATAAATGCAGTATTTGATTTCAGGCTGCTAAATGGGCTCATTTAGCATTCATTCCTTGATGTAGACATTAAAA
3041 AAAAAACTGAATAGCATTCTTTCCAGGATAACTAATAAAGCAGACATGCTAAGCCTATAAATACATCAGCACTGCAGCAC
3121 ACGTTTAAGGTTGCCACGGACAAGGATCACACAATAGAGAACACTGTAGTAACATTTCGGTCTGCTCACAAGACCCAGAA
3201 CATTGATCAGTTTTTGTTGTTGGTTTATTATTTTTCTGTTAAAAAATTGTGAAAAGTTTGTTTTAGCTAGATGATATTTT
3281 AATAGCTGCGAGTGCTTTGGAACTATAAAGATGTCACTACTTAACACATATACCTTATGTTTTGTTTTGTTTTGTTTTAC
3361 ACTCAGTATAAATCAGGAGAAGTTAGCCAACCATCTAGCATTTAGAATCCTCTTTTTTATTGTCTTCTAAGGATATGGAT
3441 GTTCCCATAACAGCAACAAAACAGCAACAAAAACATTTCATAAATATCACTTGATAGACTGTAAGCACCTGCTTAACTTT
3521 GTGTCCCAAATATTTAGTGTGTATATATATATATATATATACACACACACACACATATATATTCAACAAATAAAGCAAAA
3601 TATAACATGCATTTCACATTTTGTCTTTCCCTGTTACGATTTTAATAGCAGAACTGTATGACAAGTTTAGGTGATCCTAG
3681 CATATGTTAAATTCAAATTAATGTAAAACAGATTAACAACAACAAAGAAACTGTCTATTTGAGTGAAGTCATGCTTTCTA
3761 TTATAATAACTTGGCTTCGGTTATCCATCAAATGCACACTTATACTGTTATCTGATTGTTTATAATAAAGAATACTGTAC
3841 TTATA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ugACGUCGGAACUGGAGGGUc 5'
            | | ||||  :||||||| 
Target 5' tcTCCTGCCTCAGCCTCCCAa 3'
2290 - 2310 159.00 -20.60
2
miRNA  3' ugacGUCGGAACUGGAGGGUc 5'
              | ||||  :||||||| 
Target 5' ccgcCCGCCTCAGCCTCCCAa 3'
2417 - 2437 157.00 -18.50
3
miRNA  3' ugACGUCGGAACUGGAGGGUc 5'
            |||| |||  :||||||: 
Target 5' acTGCAACCTCTGCCTCCCGg 3'
2258 - 2278 151.00 -28.70
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
311891 96 ClinVar
311887 302 ClinVar
311882 453 ClinVar
311875 668 ClinVar
311874 671 ClinVar
311849 2180 ClinVar
311848 2181 ClinVar
311847 2182 ClinVar
311845 2203 ClinVar
311846 2203 ClinVar
311822 3562 ClinVar
311823 3562 ClinVar
311824 3562 ClinVar
311819 3564 ClinVar
311818 3566 ClinVar
311816 3576 ClinVar
311817 3576 ClinVar
311815 3591 ClinVar
COSN30466965 13 COSMIC
COSN31529109 23 COSMIC
COSN30141394 24 COSMIC
COSN31486345 30 COSMIC
COSN31571390 34 COSMIC
COSN26995680 43 COSMIC
COSN30494838 58 COSMIC
COSN32060849 82 COSMIC
COSN26995679 95 COSMIC
COSN31600127 101 COSMIC
COSN31604223 126 COSMIC
COSN31573489 129 COSMIC
COSN31599236 353 COSMIC
COSN23987612 396 COSMIC
COSN20110613 432 COSMIC
COSN20110612 474 COSMIC
COSN8128988 1014 COSMIC
COSN19497140 1052 COSMIC
COSN21132084 1158 COSMIC
COSN27144981 1679 COSMIC
COSN5337624 1859 COSMIC
COSN27302832 1990 COSMIC
COSN29895722 2008 COSMIC
COSN15361067 2591 COSMIC
COSN25539133 2663 COSMIC
COSN9745968 2913 COSMIC
COSN8591134 2958 COSMIC
COSN28471480 3036 COSMIC
COSN32061591 3170 COSMIC
COSN1158045 3543 COSMIC
COSN28202050 3560 COSMIC
rs511674 298 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1294219701 1 dbSNP
rs1438829257 3 dbSNP
rs746503802 3 dbSNP
rs758938512 7 dbSNP
rs185805617 9 dbSNP
rs1323446394 21 dbSNP
rs1313445294 26 dbSNP
rs765586275 29 dbSNP
rs1441718356 30 dbSNP
rs755162975 33 dbSNP
rs754037258 41 dbSNP
rs766497551 46 dbSNP
rs2762140 47 dbSNP
rs764071282 48 dbSNP
rs1343539673 54 dbSNP
rs200375847 57 dbSNP
rs1030109484 60 dbSNP
rs992481114 61 dbSNP
rs961882113 66 dbSNP
rs1221840332 68 dbSNP
rs373980020 75 dbSNP
rs975785359 77 dbSNP
rs1274723191 86 dbSNP
rs1352583341 92 dbSNP
rs1306192085 94 dbSNP
rs763993290 96 dbSNP
rs1391351312 100 dbSNP
rs1192470086 102 dbSNP
rs964530989 108 dbSNP
rs1017361843 109 dbSNP
rs1184758986 112 dbSNP
rs181634186 118 dbSNP
rs768104903 126 dbSNP
rs1396971323 127 dbSNP
rs548831659 134 dbSNP
rs1027368695 135 dbSNP
rs993241531 138 dbSNP
rs1026648522 139 dbSNP
rs993547964 140 dbSNP
rs907186857 141 dbSNP
rs190329099 142 dbSNP
rs1361681333 145 dbSNP
rs1159661672 146 dbSNP
rs1473335340 160 dbSNP
rs1249169312 162 dbSNP
rs1180459587 164 dbSNP
rs948762240 166 dbSNP
rs1229261902 178 dbSNP
rs894661849 181 dbSNP
rs1332263370 187 dbSNP
rs1451733136 189 dbSNP
rs1054586698 191 dbSNP
rs563144187 196 dbSNP
rs489646 200 dbSNP
rs1212189587 203 dbSNP
rs1009549535 205 dbSNP
rs924920956 210 dbSNP
rs1042347142 215 dbSNP
rs1472967043 221 dbSNP
rs1272888020 240 dbSNP
rs1420234993 243 dbSNP
rs889386667 245 dbSNP
rs1050834278 249 dbSNP
rs185427785 255 dbSNP
rs922904932 256 dbSNP
rs1316781680 262 dbSNP
rs1331481955 278 dbSNP
rs368344224 280 dbSNP
rs1345121046 282 dbSNP
rs1278063945 284 dbSNP
rs1415737966 295 dbSNP
rs511674 298 dbSNP
rs1041813813 301 dbSNP
rs886050169 302 dbSNP
rs964394786 306 dbSNP
rs748165059 313 dbSNP
rs879741021 314 dbSNP
rs1352149189 315 dbSNP
rs951965778 317 dbSNP
rs992020452 334 dbSNP
rs1442961458 337 dbSNP
rs1325646770 349 dbSNP
rs1026260109 353 dbSNP
rs1393661457 358 dbSNP
rs886050168 364 dbSNP
rs1187481992 376 dbSNP
rs1320901103 381 dbSNP
rs200205360 383 dbSNP
rs1407830746 388 dbSNP
rs683296 396 dbSNP
rs193264567 402 dbSNP
rs1157682950 408 dbSNP
rs1329037755 409 dbSNP
rs1337197676 426 dbSNP
rs1439337660 433 dbSNP
rs147498490 436 dbSNP
rs1378819396 449 dbSNP
rs188997771 452 dbSNP
rs886050167 453 dbSNP
rs1278181421 455 dbSNP
rs1346807360 458 dbSNP
rs1467478866 465 dbSNP
rs1253002271 471 dbSNP
rs1209739884 474 dbSNP
rs1251462867 475 dbSNP
rs1439800130 477 dbSNP
rs780853453 482 dbSNP
rs971771185 484 dbSNP
rs1168881069 485 dbSNP
rs1176061335 485 dbSNP
rs1393817304 485 dbSNP
rs1434451027 485 dbSNP
rs961798848 485 dbSNP
rs1019501256 491 dbSNP
rs1009084164 495 dbSNP
rs1371076285 496 dbSNP
rs754024297 497 dbSNP
rs1223393108 498 dbSNP
rs1346005087 499 dbSNP
rs1013016814 514 dbSNP
rs1370195864 517 dbSNP
rs1227826164 518 dbSNP
rs894601141 537 dbSNP
rs1252831369 544 dbSNP
rs1276631867 549 dbSNP
rs1337243505 550 dbSNP
rs17054567 557 dbSNP
rs1370150422 563 dbSNP
rs1468922568 566 dbSNP
rs527418696 573 dbSNP
rs1251627445 574 dbSNP
rs1454205070 575 dbSNP
rs555991571 577 dbSNP
rs903331170 579 dbSNP
rs1375136340 585 dbSNP
rs1041990420 586 dbSNP
rs1000481587 587 dbSNP
rs537796315 590 dbSNP
rs922969884 595 dbSNP
rs1394766589 596 dbSNP
rs1462521456 598 dbSNP
rs763643243 599 dbSNP
rs946098546 599 dbSNP
rs1382676715 603 dbSNP
rs895924259 605 dbSNP
rs142430719 606 dbSNP
rs1170298087 612 dbSNP
rs671860 615 dbSNP
rs910337165 618 dbSNP
rs1215846296 620 dbSNP
rs1271321747 621 dbSNP
rs1394986594 621 dbSNP
rs1488236121 621 dbSNP
rs886050166 624 dbSNP
rs1427042253 627 dbSNP
rs762321724 632 dbSNP
rs514501 637 dbSNP
rs1475971001 638 dbSNP
rs930586062 638 dbSNP
rs1240675823 639 dbSNP
rs951938797 640 dbSNP
rs1416514355 646 dbSNP
rs1215538692 650 dbSNP
rs1290497827 661 dbSNP
rs763619222 662 dbSNP
rs1381396148 668 dbSNP
rs886050165 668 dbSNP
rs762757980 671 dbSNP
rs920248566 679 dbSNP
rs1235368906 682 dbSNP
rs376283321 684 dbSNP
rs1321138637 692 dbSNP
rs540098032 701 dbSNP
rs972021942 703 dbSNP
rs1216581624 712 dbSNP
rs1258616567 715 dbSNP
rs868589095 716 dbSNP
rs548718832 722 dbSNP
rs1185325031 725 dbSNP
rs1412634681 729 dbSNP
rs886050164 733 dbSNP
rs1160687110 751 dbSNP
rs1361615162 752 dbSNP
rs1452934751 767 dbSNP
rs1174264136 770 dbSNP
rs1377039832 781 dbSNP
rs1412720562 785 dbSNP
rs530278633 787 dbSNP
rs1012953348 791 dbSNP
rs1391986004 792 dbSNP
rs769650059 792 dbSNP
rs147681674 793 dbSNP
rs958681167 801 dbSNP
rs886050163 805 dbSNP
rs1033116634 806 dbSNP
rs1209181139 811 dbSNP
rs1236493153 812 dbSNP
rs1480742892 814 dbSNP
rs1178618157 818 dbSNP
rs551283752 819 dbSNP
rs1029612840 821 dbSNP
rs1194125231 827 dbSNP
rs1396822230 830 dbSNP
rs1432591032 836 dbSNP
rs1175122369 838 dbSNP
rs147064809 841 dbSNP
rs1354941981 842 dbSNP
rs1462657620 846 dbSNP
rs148920229 850 dbSNP
rs769611218 851 dbSNP
rs759403208 853 dbSNP
rs1433531042 854 dbSNP
rs1304720966 855 dbSNP
rs545451496 856 dbSNP
rs1232807182 868 dbSNP
rs17804636 870 dbSNP
rs1169962764 871 dbSNP
rs1010244948 874 dbSNP
rs557776840 883 dbSNP
rs1249279713 884 dbSNP
rs746900887 892 dbSNP
rs1417998104 895 dbSNP
rs1039925759 896 dbSNP
rs1452473183 898 dbSNP
rs1057212180 906 dbSNP
rs1186288978 911 dbSNP
rs943068214 914 dbSNP
rs888764895 921 dbSNP
rs1419954310 923 dbSNP
rs1048817057 929 dbSNP
rs1239407289 932 dbSNP
rs930362121 933 dbSNP
rs76781099 948 dbSNP
rs1275377891 951 dbSNP
rs1207396507 956 dbSNP
rs972271196 957 dbSNP
rs517297 970 dbSNP
rs183970260 971 dbSNP
rs1216699476 982 dbSNP
rs191738973 987 dbSNP
rs930533711 988 dbSNP
rs886050162 991 dbSNP
rs117069357 992 dbSNP
rs74045026 997 dbSNP
rs1486685276 1000 dbSNP
rs1350745142 1004 dbSNP
rs1421691179 1005 dbSNP
rs1309247668 1014 dbSNP
rs1166013296 1015 dbSNP
rs1420098416 1024 dbSNP
rs958711914 1027 dbSNP
rs518086 1031 dbSNP
rs1346342020 1032 dbSNP
rs886050161 1038 dbSNP
rs757486797 1042 dbSNP
rs1340339347 1055 dbSNP
rs886050160 1066 dbSNP
rs867190804 1071 dbSNP
rs1416355288 1081 dbSNP
rs1227247949 1085 dbSNP
rs953270358 1088 dbSNP
rs1163249778 1094 dbSNP
rs751376629 1097 dbSNP
rs1262201494 1115 dbSNP
rs1474967829 1122 dbSNP
rs1252813703 1132 dbSNP
rs558837786 1138 dbSNP
rs967826662 1147 dbSNP
rs1259882228 1160 dbSNP
rs1471830899 1168 dbSNP
rs1020364789 1175 dbSNP
rs1408872943 1180 dbSNP
rs1402922975 1181 dbSNP
rs1157450005 1183 dbSNP
rs922108986 1184 dbSNP
rs1415792333 1186 dbSNP
rs1314257109 1187 dbSNP
rs1479729726 1190 dbSNP
rs998795589 1193 dbSNP
rs1279609195 1194 dbSNP
rs1352302049 1196 dbSNP
rs1237853527 1199 dbSNP
rs1348245246 1201 dbSNP
rs978937020 1201 dbSNP
rs1212798339 1203 dbSNP
rs533910416 1204 dbSNP
rs1440891195 1210 dbSNP
rs1232206674 1211 dbSNP
rs145720170 1218 dbSNP
rs7317877 1224 dbSNP
rs1010528384 1232 dbSNP
rs34338985 1239 dbSNP
rs1007074217 1243 dbSNP
rs888797347 1259 dbSNP
rs1270977901 1263 dbSNP
rs1049173360 1276 dbSNP
rs536781171 1281 dbSNP
rs1175942299 1283 dbSNP
rs1400576118 1302 dbSNP
rs1413523314 1302 dbSNP
rs187290607 1303 dbSNP
rs1329198661 1306 dbSNP
rs1336958826 1308 dbSNP
rs750622515 1313 dbSNP
rs763918295 1322 dbSNP
rs1289893549 1325 dbSNP
rs1236474221 1343 dbSNP
rs1221552264 1344 dbSNP
rs1253996143 1348 dbSNP
rs1372031103 1350 dbSNP
rs1036124256 1351 dbSNP
rs773412888 1362 dbSNP
rs1001614586 1363 dbSNP
rs1036097210 1366 dbSNP
rs1196863890 1367 dbSNP
rs551222131 1372 dbSNP
rs4943430 1379 dbSNP
rs571813878 1382 dbSNP
rs1196099327 1383 dbSNP
rs1461307998 1383 dbSNP
rs1376272220 1390 dbSNP
rs1477914508 1392 dbSNP
rs1168068794 1399 dbSNP
rs1398223775 1400 dbSNP
rs991416475 1410 dbSNP
rs1412949949 1415 dbSNP
rs994630517 1428 dbSNP
rs376298627 1429 dbSNP
rs7999149 1430 dbSNP
rs925945790 1434 dbSNP
rs563971303 1440 dbSNP
rs940640485 1443 dbSNP
rs1330237317 1447 dbSNP
rs1270946935 1449 dbSNP
rs1320296241 1449 dbSNP
rs1477485375 1449 dbSNP
rs1217088029 1452 dbSNP
rs911540527 1454 dbSNP
rs1469016258 1455 dbSNP
rs1051894568 1465 dbSNP
rs1265890644 1466 dbSNP
rs931719636 1482 dbSNP
rs1194375111 1490 dbSNP
rs1407289727 1490 dbSNP
rs1375195678 1494 dbSNP
rs978892490 1507 dbSNP
rs1417938714 1513 dbSNP
rs764846752 1525 dbSNP
rs1251137464 1530 dbSNP
rs1212825438 1533 dbSNP
rs373187347 1536 dbSNP
rs947531903 1537 dbSNP
rs913444539 1540 dbSNP
rs1338194572 1543 dbSNP
rs527237714 1545 dbSNP
rs1277822160 1547 dbSNP
rs1335477091 1550 dbSNP
rs1247124581 1554 dbSNP
rs1264154115 1554 dbSNP
rs1356238716 1555 dbSNP
rs1206286916 1576 dbSNP
rs1269594109 1606 dbSNP
rs1265792168 1621 dbSNP
rs967397451 1629 dbSNP
rs1020817448 1635 dbSNP
rs1487547475 1636 dbSNP
rs1213160995 1640 dbSNP
rs976845746 1646 dbSNP
rs886050159 1647 dbSNP
rs1475877024 1648 dbSNP
rs1035667860 1649 dbSNP
rs78350756 1667 dbSNP
rs970127291 1668 dbSNP
rs1160294470 1672 dbSNP
rs1358375180 1672 dbSNP
rs1399171548 1677 dbSNP
rs1027034128 1684 dbSNP
rs1356365166 1685 dbSNP
rs1440594959 1689 dbSNP
rs1389794398 1694 dbSNP
rs116748086 1696 dbSNP
rs1340021203 1706 dbSNP
rs1007106769 1708 dbSNP
rs529775445 1710 dbSNP
rs1014731201 1712 dbSNP
rs1027237592 1720 dbSNP
rs1216379519 1721 dbSNP
rs759060670 1722 dbSNP
rs562322000 1728 dbSNP
rs1484014806 1733 dbSNP
rs1179795859 1734 dbSNP
rs544048926 1746 dbSNP
rs1176873218 1761 dbSNP
rs1254863008 1768 dbSNP
rs1455682764 1770 dbSNP
rs890380310 1779 dbSNP
rs1378440568 1780 dbSNP
rs1418815191 1792 dbSNP
rs1192973218 1797 dbSNP
rs1450035710 1812 dbSNP
rs1377090093 1820 dbSNP
rs1467773086 1820 dbSNP
rs1263522508 1829 dbSNP
rs1301377534 1829 dbSNP
rs1203173289 1835 dbSNP
rs1312043156 1841 dbSNP
rs371467710 1843 dbSNP
rs1240120334 1846 dbSNP
rs1051412476 1848 dbSNP
rs1314376449 1851 dbSNP
rs1207568806 1852 dbSNP
rs1255063135 1853 dbSNP
rs1480651048 1857 dbSNP
rs1200008786 1859 dbSNP
rs931649775 1862 dbSNP
rs1438975351 1865 dbSNP
rs1194261694 1871 dbSNP
rs1256289846 1873 dbSNP
rs900204948 1877 dbSNP
rs1174144047 1878 dbSNP
rs994937312 1890 dbSNP
rs897468913 1896 dbSNP
rs1042827797 1900 dbSNP
rs947144193 1905 dbSNP
rs913390996 1913 dbSNP
rs988993093 1915 dbSNP
rs570981080 1916 dbSNP
rs752056427 1921 dbSNP
rs1234143681 1926 dbSNP
rs1013982794 1927 dbSNP
rs980091027 1931 dbSNP
rs776270828 1932 dbSNP
rs1220133996 1938 dbSNP
rs1255606380 1946 dbSNP
rs895659165 1947 dbSNP
rs1026982007 1949 dbSNP
rs576985444 1952 dbSNP
rs1055597056 1954 dbSNP
rs886050158 1960 dbSNP
rs937154216 1961 dbSNP
rs961468238 1964 dbSNP
rs1420021975 1970 dbSNP
rs1478251628 1990 dbSNP
rs1173176597 1991 dbSNP
rs925896293 1995 dbSNP
rs1014680332 1999 dbSNP
rs1042965371 2021 dbSNP
rs1435008895 2027 dbSNP
rs1380954424 2031 dbSNP
rs4943429 2036 dbSNP
rs866065815 2038 dbSNP
rs1401452401 2054 dbSNP
rs1275930281 2062 dbSNP
rs1316679831 2067 dbSNP
rs540526413 2068 dbSNP
rs913210177 2073 dbSNP
rs375291879 2079 dbSNP
rs1291871556 2089 dbSNP
rs977256330 2103 dbSNP
rs573273431 2104 dbSNP
rs1373667423 2108 dbSNP
rs911394841 2117 dbSNP
rs1173114577 2125 dbSNP
rs985635178 2136 dbSNP
rs868657050 2137 dbSNP
rs368926539 2138 dbSNP
rs1196039792 2139 dbSNP
rs1261309434 2149 dbSNP
rs1477509569 2162 dbSNP
rs1163888414 2163 dbSNP
rs1374726298 2164 dbSNP
rs1190745827 2166 dbSNP
rs1416105442 2167 dbSNP
rs1027670942 2169 dbSNP
rs150738535 2169 dbSNP
rs536720633 2171 dbSNP
rs1256388625 2177 dbSNP
rs886050157 2180 dbSNP
rs886050156 2181 dbSNP
rs886050155 2182 dbSNP
rs10579121 2184 dbSNP
rs1218975450 2184 dbSNP
rs1421913799 2188 dbSNP
rs1189580954 2198 dbSNP
rs1484499732 2199 dbSNP
rs1256129165 2200 dbSNP
rs1205260723 2201 dbSNP
rs1214218217 2203 dbSNP
rs1227658337 2203 dbSNP
rs1284884362 2203 dbSNP
rs1285415409 2203 dbSNP
rs1295923733 2203 dbSNP
rs1339465647 2203 dbSNP
rs1376420702 2203 dbSNP
rs1448359642 2203 dbSNP
rs35811523 2203 dbSNP
rs563915988 2203 dbSNP
rs761700051 2203 dbSNP
rs763576991 2203 dbSNP
rs886050153 2203 dbSNP
rs886050154 2203 dbSNP
rs1181722044 2204 dbSNP
rs1239274679 2204 dbSNP
rs1343496148 2204 dbSNP
rs1471860938 2204 dbSNP
rs1381515554 2205 dbSNP
rs1441882061 2205 dbSNP
rs1157205538 2206 dbSNP
rs1360330387 2207 dbSNP
rs1253656706 2209 dbSNP
rs374806224 2215 dbSNP
rs117560648 2216 dbSNP
rs1309838585 2217 dbSNP
rs1379050679 2237 dbSNP
rs962026212 2244 dbSNP
rs1308255454 2247 dbSNP
rs1014556203 2255 dbSNP
rs1281006539 2262 dbSNP
rs1440736353 2263 dbSNP
rs1014015241 2274 dbSNP
rs764971335 2276 dbSNP
rs182950444 2277 dbSNP
rs1312278291 2280 dbSNP
rs774631887 2282 dbSNP
rs1001398450 2283 dbSNP
rs571815357 2293 dbSNP
rs1043378970 2294 dbSNP
rs1173897565 2310 dbSNP
rs1422658564 2315 dbSNP
rs1413358312 2318 dbSNP
rs1461451229 2321 dbSNP
rs546973777 2325 dbSNP
rs140021744 2333 dbSNP
rs368991694 2334 dbSNP
rs1040988038 2335 dbSNP
rs1473985283 2341 dbSNP
rs1416803009 2343 dbSNP
rs1182251748 2345 dbSNP
rs1235187412 2347 dbSNP
rs1343115319 2350 dbSNP
rs1223170125 2351 dbSNP
rs1258786366 2352 dbSNP
rs1210090259 2366 dbSNP
rs780470598 2367 dbSNP
rs1253250658 2371 dbSNP
rs1452509503 2371 dbSNP
rs1201491254 2376 dbSNP
rs1245392366 2378 dbSNP
rs146604068 2387 dbSNP
rs1171022618 2392 dbSNP
rs1425079599 2398 dbSNP
rs1463612440 2399 dbSNP
rs547812183 2403 dbSNP
rs653693 2404 dbSNP
rs1391396495 2405 dbSNP
rs985499449 2408 dbSNP
rs139696883 2418 dbSNP
rs1235535185 2419 dbSNP
rs550662480 2422 dbSNP
rs920085048 2423 dbSNP
rs1404550726 2425 dbSNP
rs372435961 2439 dbSNP
rs919912419 2439 dbSNP
rs1320007279 2444 dbSNP
rs974056266 2445 dbSNP
rs1251195696 2446 dbSNP
rs961416464 2451 dbSNP
rs1212220808 2452 dbSNP
rs642866 2465 dbSNP
rs986938922 2466 dbSNP
rs961617241 2467 dbSNP
rs1025640768 2468 dbSNP
rs1391374787 2470 dbSNP
rs372868885 2471 dbSNP
rs1327665430 2472 dbSNP
rs1368585051 2488 dbSNP
rs1459373064 2500 dbSNP
rs996485981 2508 dbSNP
rs141647648 2512 dbSNP
rs778750481 2512 dbSNP
rs199702528 2514 dbSNP
rs1420083627 2519 dbSNP
rs192843833 2524 dbSNP
rs964637243 2533 dbSNP
rs1159498944 2542 dbSNP
rs1470976209 2543 dbSNP
rs142569873 2546 dbSNP
rs959676022 2552 dbSNP
rs1264211142 2553 dbSNP
rs879741300 2553 dbSNP
rs1359123421 2555 dbSNP
rs1217840328 2559 dbSNP
rs1034128829 2569 dbSNP
rs891515471 2579 dbSNP
rs1204245878 2581 dbSNP
rs1256221570 2584 dbSNP
rs1053272281 2587 dbSNP
rs540281452 2588 dbSNP
rs1440021813 2589 dbSNP
rs918574433 2591 dbSNP
rs1160212398 2596 dbSNP
rs1044595173 2604 dbSNP
rs760413965 2605 dbSNP
rs920194520 2611 dbSNP
rs1215922070 2614 dbSNP
rs1021418200 2616 dbSNP
rs1397893971 2630 dbSNP
rs886050152 2636 dbSNP
rs77375574 2653 dbSNP
rs891742907 2657 dbSNP
rs1241559582 2659 dbSNP
rs535286118 2660 dbSNP
rs908581409 2667 dbSNP
rs1237804999 2668 dbSNP
rs1256227587 2670 dbSNP
rs1205894815 2673 dbSNP
rs1198252656 2678 dbSNP
rs1242041893 2683 dbSNP
rs114000293 2684 dbSNP
rs1180505218 2684 dbSNP
rs1353127813 2688 dbSNP
rs1418288148 2693 dbSNP
rs1158604165 2694 dbSNP
rs1378447297 2723 dbSNP
rs1467816052 2733 dbSNP
rs543006860 2735 dbSNP
rs1405521106 2738 dbSNP
rs1448156968 2747 dbSNP
rs1333972858 2754 dbSNP
rs570589453 2757 dbSNP
rs889757873 2762 dbSNP
rs1301478370 2764 dbSNP
rs772060332 2766 dbSNP
rs931376176 2771 dbSNP
rs1261962152 2772 dbSNP
rs920097215 2786 dbSNP
rs1200386487 2796 dbSNP
rs1236316874 2797 dbSNP
rs1438403524 2801 dbSNP
rs1480158687 2801 dbSNP
rs752190328 2801 dbSNP
rs972961792 2804 dbSNP
rs1269244866 2805 dbSNP
rs1435120185 2813 dbSNP
rs1393408714 2816 dbSNP
rs1174617770 2817 dbSNP
rs940182090 2822 dbSNP
rs918197099 2832 dbSNP
rs1402023664 2835 dbSNP
rs575718491 2841 dbSNP
rs992397584 2857 dbSNP
rs1442184570 2861 dbSNP
rs1011533376 2866 dbSNP
rs188716730 2892 dbSNP
rs1033992337 2893 dbSNP
rs796528170 2896 dbSNP
rs749354296 2899 dbSNP
rs955688597 2901 dbSNP
rs1031358998 2902 dbSNP
rs1196096779 2904 dbSNP
rs118015060 2905 dbSNP
rs1252702334 2909 dbSNP
rs115827609 2910 dbSNP
rs1044932246 2918 dbSNP
rs1282491930 2920 dbSNP
rs1487393063 2921 dbSNP
rs1204608553 2922 dbSNP
rs1197460523 2923 dbSNP
rs1268490353 2930 dbSNP
rs1348742392 2936 dbSNP
rs1195908282 2943 dbSNP
rs779105627 2944 dbSNP
rs1231927156 2948 dbSNP
rs1409892528 2953 dbSNP
rs1166183598 2954 dbSNP
rs1370170959 2956 dbSNP
rs1423162443 2958 dbSNP
rs1270487402 2973 dbSNP
rs1013039867 2978 dbSNP
rs1340719752 2982 dbSNP
rs1401503072 3011 dbSNP
rs1275750389 3012 dbSNP
rs898716405 3021 dbSNP
rs1038587835 3025 dbSNP
rs553566297 3030 dbSNP
rs78795240 3035 dbSNP
rs1317256327 3036 dbSNP
rs78289768 3037 dbSNP
rs887096637 3039 dbSNP
rs1488723537 3041 dbSNP
rs1051118832 3047 dbSNP
rs1240418273 3047 dbSNP
rs201456433 3047 dbSNP
rs1010107678 3052 dbSNP
rs1182909216 3053 dbSNP
rs546133361 3062 dbSNP
rs148397729 3070 dbSNP
rs1171218576 3077 dbSNP
rs368565473 3082 dbSNP
rs1008077254 3105 dbSNP
rs889788850 3112 dbSNP
rs1421122381 3115 dbSNP
rs1049684863 3116 dbSNP
rs1395086263 3130 dbSNP
rs943174149 3132 dbSNP
rs183668512 3137 dbSNP
rs1476622180 3138 dbSNP
rs1304470114 3144 dbSNP
rs1380465482 3146 dbSNP
rs898619724 3154 dbSNP
rs192306556 3156 dbSNP
rs1192696345 3165 dbSNP
rs1355661252 3168 dbSNP
rs1037506881 3170 dbSNP
rs1242511955 3173 dbSNP
rs1486135500 3176 dbSNP
rs113075847 3177 dbSNP
rs763803828 3177 dbSNP
rs972806115 3178 dbSNP
rs940232504 3179 dbSNP
rs918061717 3185 dbSNP
rs1239324828 3187 dbSNP
rs375433575 3188 dbSNP
rs1183573131 3198 dbSNP
rs1381241958 3201 dbSNP
rs1441932470 3204 dbSNP
rs1208821527 3209 dbSNP
rs1406826801 3222 dbSNP
rs1414734304 3223 dbSNP
rs1335587210 3233 dbSNP
rs1031722945 3238 dbSNP
rs1451811201 3247 dbSNP
rs1347053791 3250 dbSNP
rs1273698851 3253 dbSNP
rs1216081969 3255 dbSNP
rs557291816 3259 dbSNP
rs886050151 3262 dbSNP
rs17054555 3263 dbSNP
rs1022719039 3270 dbSNP
rs1012660766 3274 dbSNP
rs1321520452 3281 dbSNP
rs898651302 3283 dbSNP
rs550402301 3285 dbSNP
rs938203944 3287 dbSNP
rs1239356714 3288 dbSNP
rs553116010 3289 dbSNP
rs1004395552 3304 dbSNP
rs912610192 3306 dbSNP
rs926951702 3306 dbSNP
rs186639913 3310 dbSNP
rs571330204 3314 dbSNP
rs546744327 3315 dbSNP
rs528308806 3319 dbSNP
rs561123886 3323 dbSNP
rs796547929 3329 dbSNP
rs1039807506 3330 dbSNP
rs946805757 3339 dbSNP
rs201852659 3342 dbSNP
rs1402342182 3344 dbSNP
rs1412163866 3344 dbSNP
rs533246958 3347 dbSNP
rs1327932662 3348 dbSNP
rs914394517 3349 dbSNP
rs1343670502 3359 dbSNP
rs142662999 3359 dbSNP
rs989993457 3359 dbSNP
rs1420379922 3365 dbSNP
rs564314539 3380 dbSNP
rs1485411616 3383 dbSNP
rs542945649 3385 dbSNP
rs1342051278 3387 dbSNP
rs1194663948 3391 dbSNP
rs1233352250 3398 dbSNP
rs1452565341 3414 dbSNP
rs1206485808 3420 dbSNP
rs1019368517 3421 dbSNP
rs1193717009 3422 dbSNP
rs781292297 3423 dbSNP
rs1460389861 3433 dbSNP
rs1167273553 3435 dbSNP
rs1391093281 3441 dbSNP
rs1406904845 3444 dbSNP
rs1305139274 3447 dbSNP
rs757620243 3452 dbSNP
rs530924097 3456 dbSNP
rs747373979 3463 dbSNP
rs1404611899 3467 dbSNP
rs1278919055 3473 dbSNP
rs1328337526 3474 dbSNP
rs368991466 3475 dbSNP
rs1336481384 3476 dbSNP
rs1225805771 3477 dbSNP
rs1291113873 3479 dbSNP
rs553197397 3480 dbSNP
rs182314238 3487 dbSNP
rs563740905 3492 dbSNP
rs1022611160 3497 dbSNP
rs1028194226 3517 dbSNP
rs1490082513 3524 dbSNP
rs1216957854 3529 dbSNP
rs1263146784 3541 dbSNP
rs539407431 3543 dbSNP
rs991186626 3543 dbSNP
rs898476958 3545 dbSNP
rs1037131709 3547 dbSNP
rs1331089988 3548 dbSNP
rs1424251903 3553 dbSNP
rs887325648 3556 dbSNP
rs1004681389 3557 dbSNP
rs1029908576 3558 dbSNP
rs778421285 3558 dbSNP
rs200706226 3560 dbSNP
rs1475019188 3561 dbSNP
rs71215993 3561 dbSNP
rs1318194048 3562 dbSNP
rs200997581 3562 dbSNP
rs627799 3562 dbSNP
rs71084449 3562 dbSNP
rs886050149 3562 dbSNP
rs886050150 3562 dbSNP
rs998880877 3562 dbSNP
rs1039753746 3564 dbSNP
rs1181743860 3564 dbSNP
rs1462595420 3564 dbSNP
rs201326442 3564 dbSNP
rs757843262 3564 dbSNP
rs775004128 3564 dbSNP
rs141967694 3566 dbSNP
rs1440084729 3566 dbSNP
rs1478164947 3566 dbSNP
rs763588553 3566 dbSNP
rs765087015 3566 dbSNP
rs1044348110 3574 dbSNP
rs1309662898 3576 dbSNP
rs1448007459 3576 dbSNP
rs201352307 3576 dbSNP
rs879769040 3576 dbSNP
rs1314735401 3578 dbSNP
rs1237968714 3581 dbSNP
rs1179039110 3583 dbSNP
rs541193305 3584 dbSNP
rs1232294369 3589 dbSNP
rs886050148 3591 dbSNP
rs12867621 3599 dbSNP
rs1469683314 3606 dbSNP
rs1271071695 3609 dbSNP
rs914202417 3616 dbSNP
rs1248232301 3623 dbSNP
rs1417540387 3630 dbSNP
rs142859921 3632 dbSNP
rs1181378362 3633 dbSNP
rs1174837871 3637 dbSNP
rs765012405 3637 dbSNP
rs1405963040 3638 dbSNP
rs924472670 3640 dbSNP
rs1300264271 3648 dbSNP
rs1212628647 3650 dbSNP
rs550580753 3658 dbSNP
rs988583017 3661 dbSNP
rs1308429505 3676 dbSNP
rs759372557 3678 dbSNP
rs1301548793 3693 dbSNP
rs1346804184 3697 dbSNP
rs1221179454 3701 dbSNP
rs1262020791 3709 dbSNP
rs1045634196 3713 dbSNP
rs555596497 3713 dbSNP
rs1249344089 3714 dbSNP
rs950039030 3725 dbSNP
rs915549433 3726 dbSNP
rs1371794929 3731 dbSNP
rs991134160 3732 dbSNP
rs751167827 3737 dbSNP
rs770760589 3737 dbSNP
rs909645549 3737 dbSNP
rs1428768640 3741 dbSNP
rs912306323 3747 dbSNP
rs199719891 3751 dbSNP
rs953863009 3756 dbSNP
rs1461824945 3757 dbSNP
rs552769583 3758 dbSNP
rs201077965 3760 dbSNP
rs1402763196 3762 dbSNP
rs1282073391 3763 dbSNP
rs1340609769 3770 dbSNP
rs9576122 3770 dbSNP
rs60270973 3771 dbSNP
rs750438704 3771 dbSNP
rs111717162 3778 dbSNP
rs190024052 3783 dbSNP
rs1379584852 3791 dbSNP
rs568384337 3799 dbSNP
rs1490899795 3802 dbSNP
rs185360521 3803 dbSNP
rs1268201548 3805 dbSNP
rs1486239895 3819 dbSNP
rs962760627 3830 dbSNP
rs1188763335 3833 dbSNP
rs538275998 3835 dbSNP
rs1015971127 3836 dbSNP
rs1052521203 3837 dbSNP
rs1000056856 3841 dbSNP
rs1422299464 3844 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084064. RNA binding protein: AGO2. Condition:CLIP_noemetine_AbnovaAb HITS-CLIP data was present in GSM1084065. RNA binding protein: AGO2. Condition:CLIP_emetine_AbnovaAb HITS-CLIP data was present in GSM1084078. RNA binding protein: AGO2. Condition:CLIP_nohippuristanol_rep2_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084064
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noemetine_AbnovaAb
Location of target site ENST00000399275.2 | 3UTR | GAGUGAUUCUCCUGCCUCAGCCUCCCAAGU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1084065
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_emetine_AbnovaAb
Location of target site ENST00000399275.2 | 3UTR | GAGUGAUUCUCCUGCCUCAGCCUC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM1084078
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_nohippuristanol_rep2_AbnovaAb
Location of target site ENST00000399275.2 | 3UTR | UCGAGUGAUUCUCCUGCCUCAGCCUCCCAAGU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
494 hsa-miR-1273h-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT074355 TNRC6A trinucleotide repeat containing 6A 2 2
MIRT100721 TJAP1 tight junction associated protein 1 2 2
MIRT115545 MAZ MYC associated zinc finger protein 2 2
MIRT124982 XIAP X-linked inhibitor of apoptosis 2 4
MIRT139911 BTF3L4 basic transcription factor 3 like 4 2 6
MIRT177183 ARL5B ADP ribosylation factor like GTPase 5B 2 4
MIRT187994 MBD6 methyl-CpG binding domain protein 6 2 2
MIRT207410 MAT2A methionine adenosyltransferase 2A 2 6
MIRT241928 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 2 2
MIRT260110 KLHL21 kelch like family member 21 2 2
MIRT260358 XRCC6 X-ray repair cross complementing 6 2 6
MIRT266428 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT294663 ZNF548 zinc finger protein 548 2 2
MIRT351039 PLEKHB2 pleckstrin homology domain containing B2 2 2
MIRT379943 PRRG4 proline rich and Gla domain 4 2 2
MIRT398983 KAT7 lysine acetyltransferase 7 2 2
MIRT441465 BEST3 bestrophin 3 2 2
MIRT446750 ZNF491 zinc finger protein 491 2 2
MIRT449224 RAD51B RAD51 paralog B 2 2
MIRT450623 AQR aquarius intron-binding spliceosomal factor 2 2
MIRT451090 ZNF584 zinc finger protein 584 2 2
MIRT451558 CIAPIN1 cytokine induced apoptosis inhibitor 1 2 2
MIRT451736 CES3 carboxylesterase 3 2 2
MIRT452411 QDPR quinoid dihydropteridine reductase 2 2
MIRT452559 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT452851 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT452922 DISC1 disrupted in schizophrenia 1 2 2
MIRT453043 TANGO2 transport and golgi organization 2 homolog 2 4
MIRT453097 HOXC4 homeobox C4 2 2
MIRT453297 ZNF394 zinc finger protein 394 2 2
MIRT453593 ZNF557 zinc finger protein 557 2 2
MIRT453787 KBTBD12 kelch repeat and BTB domain containing 12 2 2
MIRT453987 CECR1 adenosine deaminase 2 2 2
MIRT454083 TMEM209 transmembrane protein 209 2 2
MIRT454652 FBXL18 F-box and leucine rich repeat protein 18 2 2
MIRT454753 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 2 2
MIRT455311 TTLL9 tubulin tyrosine ligase like 9 2 2
MIRT456468 SERAC1 serine active site containing 1 2 2
MIRT456554 TOMM20 translocase of outer mitochondrial membrane 20 2 2
MIRT456716 TMEM239 transmembrane protein 239 2 4
MIRT456796 SIGLEC14 sialic acid binding Ig like lectin 14 2 2
MIRT457487 SLC35F6 solute carrier family 35 member F6 2 2
MIRT457999 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT458130 TLCD2 TLC domain containing 2 2 2
MIRT459027 ZNF490 zinc finger protein 490 2 4
MIRT459119 FADS6 fatty acid desaturase 6 2 2
MIRT459315 HAVCR2 hepatitis A virus cellular receptor 2 2 2
MIRT459385 MPLKIP M-phase specific PLK1 interacting protein 2 2
MIRT459412 FAM83B family with sequence similarity 83 member B 2 2
MIRT459974 RFT1 RFT1 homolog 2 2
MIRT460480 FAM105A family with sequence similarity 105 member A 2 6
MIRT460586 FEM1A fem-1 homolog A 2 2
MIRT460920 NOA1 nitric oxide associated 1 2 4
MIRT461072 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT461590 DPH2 DPH2 homolog 2 2
MIRT461854 ZNF317 zinc finger protein 317 2 2
MIRT462176 ACADL acyl-CoA dehydrogenase, long chain 2 2
MIRT462446 GCDH glutaryl-CoA dehydrogenase 2 2
MIRT463854 WNT7B Wnt family member 7B 2 2
MIRT464310 UST uronyl 2-sulfotransferase 2 2
MIRT464815 UBE2B ubiquitin conjugating enzyme E2 B 2 2
MIRT465453 TOR2A torsin family 2 member A 2 2
MIRT466073 TMEM184C transmembrane protein 184C 2 2
MIRT466514 TBXA2R thromboxane A2 receptor 2 2
MIRT467072 SRRD SRR1 domain containing 2 2
MIRT469551 RARA retinoic acid receptor alpha 2 2
MIRT469741 RAB2B RAB2B, member RAS oncogene family 2 2
MIRT470759 PNPLA6 patatin like phospholipase domain containing 6 2 2
MIRT470875 PLXND1 plexin D1 2 2
MIRT470976 PITPNA phosphatidylinositol transfer protein alpha 2 2
MIRT471048 PIM3 Pim-3 proto-oncogene, serine/threonine kinase 2 2
MIRT471215 PHAX phosphorylated adaptor for RNA export 2 2
MIRT471246 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT471286 PGAM4 phosphoglycerate mutase family member 4 2 2
MIRT471467 PDE7B phosphodiesterase 7B 2 2
MIRT473069 MORN4 MORN repeat containing 4 2 4
MIRT473989 LRRC20 leucine rich repeat containing 20 2 2
MIRT474518 KLHDC8A kelch domain containing 8A 2 2
MIRT474990 KANSL1 KAT8 regulatory NSL complex subunit 1 2 2
MIRT475547 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U like 1 2 2
MIRT476350 GIGYF1 GRB10 interacting GYF protein 1 2 2
MIRT477298 EPHB2 EPH receptor B2 2 2
MIRT477933 DPM2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory 2 2
MIRT478282 DDX19A DEAD-box helicase 19A 2 4
MIRT478472 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT478559 CTNND1 catenin delta 1 2 2
MIRT478618 CTDNEP1 CTD nuclear envelope phosphatase 1 2 2
MIRT478834 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT479007 COL5A1 collagen type V alpha 1 chain 2 2
MIRT479166 CLSPN claspin 2 2
MIRT482454 ADAR adenosine deaminase, RNA specific 2 4
MIRT483019 KHSRP KH-type splicing regulatory protein 2 4
MIRT483798 CYP2W1 cytochrome P450 family 2 subfamily W member 1 2 6
MIRT486087 SLC7A5 solute carrier family 7 member 5 2 4
MIRT486304 SIPA1 signal-induced proliferation-associated 1 2 2
MIRT486490 MYH11 myosin heavy chain 11 2 2
MIRT486881 TSPYL4 TSPY like 4 2 2
MIRT487125 NCOR2 nuclear receptor corepressor 2 2 2
MIRT487542 TM6SF2 transmembrane 6 superfamily member 2 2 4
MIRT487676 B3GALT5 beta-1,3-galactosyltransferase 5 2 4
MIRT489251 TTLL1 tubulin tyrosine ligase like 1 2 4
MIRT489276 RBM8A RNA binding motif protein 8A 2 8
MIRT489496 CRLF3 cytokine receptor like factor 3 2 4
MIRT489571 SSBP2 single stranded DNA binding protein 2 2 2
MIRT489694 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT490166 TMEM63C transmembrane protein 63C 2 2
MIRT491199 MLLT1 MLLT1, super elongation complex subunit 2 4
MIRT491260 DHX40 DEAH-box helicase 40 2 2
MIRT491385 HAUS3 HAUS augmin like complex subunit 3 2 2
MIRT491548 YAE1D1 Yae1 domain containing 1 2 2
MIRT492722 PHF12 PHD finger protein 12 2 2
MIRT493866 FAM73B mitoguardin 2 2 4
MIRT494549 BAK1 BCL2 antagonist/killer 1 2 2
MIRT498586 KRT8 keratin 8 2 2
MIRT498722 SNTN sentan, cilia apical structure protein 2 6
MIRT499982 HIST1H2BD histone cluster 1 H2B family member d 2 4
MIRT503414 SLC25A45 solute carrier family 25 member 45 2 6
MIRT508491 FTO FTO, alpha-ketoglutarate dependent dioxygenase 2 2
MIRT508877 METTL14 methyltransferase like 14 2 2
MIRT509622 RRP7A ribosomal RNA processing 7 homolog A 2 4
MIRT510104 IRAK3 interleukin 1 receptor associated kinase 3 2 8
MIRT510139 PDGFRA platelet derived growth factor receptor alpha 2 4
MIRT510353 ZNF703 zinc finger protein 703 2 6
MIRT510620 TMEM167A transmembrane protein 167A 2 4
MIRT510786 SF3B3 splicing factor 3b subunit 3 2 6
MIRT511021 NRF1 nuclear respiratory factor 1 2 2
MIRT513925 GHITM growth hormone inducible transmembrane protein 2 2
MIRT514342 DNAH17 dynein axonemal heavy chain 17 2 4
MIRT515015 SUMF2 sulfatase modifying factor 2 2 2
MIRT515246 DUSP28 dual specificity phosphatase 28 2 2
MIRT516202 RPP30 ribonuclease P/MRP subunit p30 2 2
MIRT516435 ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 2 4
MIRT516666 ZNF860 zinc finger protein 860 2 4
MIRT518373 ZNF250 zinc finger protein 250 2 2
MIRT518930 LSG1 large 60S subunit nuclear export GTPase 1 2 2
MIRT519676 ZNF70 zinc finger protein 70 2 2
MIRT519902 ZFAND4 zinc finger AN1-type containing 4 2 4
MIRT519945 ZCCHC8 zinc finger CCHC-type containing 8 2 2
MIRT520321 UBXN2A UBX domain protein 2A 2 2
MIRT520606 TMEM41B transmembrane protein 41B 2 2
MIRT520663 TMEM11 transmembrane protein 11 2 2
MIRT520852 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT521443 RAD51 RAD51 recombinase 2 2
MIRT521671 PRKAR2A protein kinase cAMP-dependent type II regulatory subunit alpha 2 2
MIRT522281 NKAP NFKB activating protein 2 2
MIRT522333 NCKIPSD NCK interacting protein with SH3 domain 2 8
MIRT522535 MED28 mediator complex subunit 28 2 6
MIRT523478 GNG4 G protein subunit gamma 4 2 2
MIRT523672 FOPNL FGFR1OP N-terminal like 2 2
MIRT523715 FBXW2 F-box and WD repeat domain containing 2 2 4
MIRT523867 ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2 2 4
MIRT524043 DNAJC8 DnaJ heat shock protein family (Hsp40) member C8 2 2
MIRT524167 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT524928 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT526825 PHC1 polyhomeotic homolog 1 2 2
MIRT531017 TDGF1P3 teratocarcinoma-derived growth factor 1 pseudogene 3 2 2
MIRT536085 MBOAT2 membrane bound O-acyltransferase domain containing 2 2 2
MIRT540681 BMP3 bone morphogenetic protein 3 2 2
MIRT541708 TMEM33 transmembrane protein 33 2 2
MIRT541755 KLF8 Kruppel like factor 8 2 2
MIRT541888 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT545714 SPTLC2 serine palmitoyltransferase long chain base subunit 2 2 2
MIRT559054 C19orf47 chromosome 19 open reading frame 47 2 4
MIRT561748 PLAGL2 PLAG1 like zinc finger 2 2 2
MIRT562365 ETV3 ETS variant 3 2 2
MIRT562821 GCFC2 GC-rich sequence DNA-binding factor 2 2 2
MIRT562900 DNAH10OS dynein axonemal heavy chain 10 opposite strand 2 2
MIRT564452 SLC35E2 solute carrier family 35 member E2 2 5
MIRT569111 ONECUT3 one cut homeobox 3 2 2
MIRT569224 SUSD1 sushi domain containing 1 2 2
MIRT570271 ARPC3 actin related protein 2/3 complex subunit 3 2 2
MIRT570498 TFIP11 tuftelin interacting protein 11 2 2
MIRT570844 GPRC5C G protein-coupled receptor class C group 5 member C 2 2
MIRT571311 TPCN2 two pore segment channel 2 2 2
MIRT572077 EXOC8 exocyst complex component 8 2 2
MIRT572116 DNAJC24 DnaJ heat shock protein family (Hsp40) member C24 2 2
MIRT573054 TRIB1 tribbles pseudokinase 1 2 2
MIRT573483 IQSEC3 IQ motif and Sec7 domain 3 2 2
MIRT573656 HES6 hes family bHLH transcription factor 6 2 2
MIRT574343 ZBTB37 zinc finger and BTB domain containing 37 2 2
MIRT576494 Slc35e2 solute carrier family 35, member E2 2 4
MIRT608033 UBLCP1 ubiquitin like domain containing CTD phosphatase 1 2 2
MIRT611326 NANOS1 nanos C2HC-type zinc finger 1 2 2
MIRT613660 KIAA1210 KIAA1210 2 2
MIRT615638 ATF6 activating transcription factor 6 2 2
MIRT618573 RRAD RRAD, Ras related glycolysis inhibitor and calcium channel regulator 2 2
MIRT618865 MBL2 mannose binding lectin 2 2 2
MIRT618962 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619172 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620298 AQP6 aquaporin 6 2 2
MIRT620683 RFTN2 raftlin family member 2 2 2
MIRT621637 UBXN2B UBX domain protein 2B 2 2
MIRT621993 STK4 serine/threonine kinase 4 2 2
MIRT622421 NUDT19 nudix hydrolase 19 2 2
MIRT622804 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT624786 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT624968 ZNF665 zinc finger protein 665 2 4
MIRT625479 SMAD9 SMAD family member 9 2 2
MIRT626594 ACAA2 acetyl-CoA acyltransferase 2 2 4
MIRT626708 TRIM65 tripartite motif containing 65 2 2
MIRT626975 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627489 STRIP2 striatin interacting protein 2 2 2
MIRT628505 ZNF878 zinc finger protein 878 2 2
MIRT628533 ZNF701 zinc finger protein 701 2 2
MIRT628591 TMEM251 transmembrane protein 251 2 2
MIRT628818 SLC25A34 solute carrier family 25 member 34 2 2
MIRT628896 IGSF6 immunoglobulin superfamily member 6 2 2
MIRT628958 UBE2D4 ubiquitin conjugating enzyme E2 D4 (putative) 2 2
MIRT629005 OSBPL10 oxysterol binding protein like 10 2 2
MIRT629059 KIF1C kinesin family member 1C 2 2
MIRT629192 PAPOLA poly(A) polymerase alpha 2 2
MIRT629346 TMPRSS11BNL TMPRSS11B N-terminal like, pseudogene 2 2
MIRT629447 WIZ widely interspaced zinc finger motifs 2 2
MIRT629696 XKR4 XK related 4 2 2
MIRT629737 SCD5 stearoyl-CoA desaturase 5 2 2
MIRT629896 SPATA5 spermatogenesis associated 5 2 2
MIRT629953 GLP2R glucagon like peptide 2 receptor 2 2
MIRT630023 MTL5 testis expressed metallothionein like protein 2 2
MIRT630181 TLN1 talin 1 2 2
MIRT630325 PAQR5 progestin and adipoQ receptor family member 5 2 2
MIRT630389 MYH9 myosin heavy chain 9 2 4
MIRT630695 EXTL3 exostosin like glycosyltransferase 3 2 2
MIRT631054 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT631130 SYNJ2 synaptojanin 2 2 2
MIRT631374 COL4A3BP collagen type IV alpha 3 binding protein 2 2
MIRT631557 TRAF3IP2 TRAF3 interacting protein 2 2 2
MIRT631615 PCDHB11 protocadherin beta 11 2 2
MIRT631935 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT632109 SSR1 signal sequence receptor subunit 1 2 2
MIRT632168 CCL22 C-C motif chemokine ligand 22 2 2
MIRT632445 SGTB small glutamine rich tetratricopeptide repeat containing beta 2 2
MIRT632652 NAV1 neuron navigator 1 2 2
MIRT632688 MTMR10 myotubularin related protein 10 2 2
MIRT632828 IGF1 insulin like growth factor 1 2 2
MIRT632905 FRRS1 ferric chelate reductase 1 2 2
MIRT633027 DNAL1 dynein axonemal light chain 1 2 2
MIRT633379 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633440 KLLN killin, p53-regulated DNA replication inhibitor 2 2
MIRT633726 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT633832 WHAMM WAS protein homolog associated with actin, golgi membranes and microtubules 2 2
MIRT633862 ATP6V1A ATPase H+ transporting V1 subunit A 2 2
MIRT634042 NUP155 nucleoporin 155 2 2
MIRT634266 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT634374 RAP2B RAP2B, member of RAS oncogene family 2 2
MIRT634439 PDE7A phosphodiesterase 7A 2 2
MIRT634573 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT634620 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT634693 DSEL dermatan sulfate epimerase-like 2 2
MIRT634768 CD3D CD3d molecule 2 2
MIRT635024 WWTR1 WW domain containing transcription regulator 1 2 2
MIRT635384 NHLRC2 NHL repeat containing 2 2 2
MIRT635577 TTC9C tetratricopeptide repeat domain 9C 2 2
MIRT635793 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT635837 ZNF264 zinc finger protein 264 2 2
MIRT636043 ZSCAN29 zinc finger and SCAN domain containing 29 2 4
MIRT636070 ZNF280C zinc finger protein 280C 2 2
MIRT636697 ARSK arylsulfatase family member K 2 2
MIRT637438 ZNF324B zinc finger protein 324B 2 2
MIRT637582 PLD6 phospholipase D family member 6 2 2
MIRT637672 PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D 2 2
MIRT637887 SLC19A3 solute carrier family 19 member 3 2 4
MIRT638353 RBMS2 RNA binding motif single stranded interacting protein 2 2 4
MIRT638597 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT638821 CRTAP cartilage associated protein 2 2
MIRT638871 CEP97 centrosomal protein 97 2 4
MIRT639660 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT640200 TIMM50 translocase of inner mitochondrial membrane 50 2 2
MIRT641592 TNS4 tensin 4 2 2
MIRT644993 POLR2J3 RNA polymerase II subunit J3 2 2
MIRT645059 UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII 2 2
MIRT646948 UPK3BL uroplakin 3B like 1 2 2
MIRT647306 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT648300 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 4
MIRT649043 SLC1A2 solute carrier family 1 member 2 2 2
MIRT649884 SLFN12L schlafen family member 12 like 2 2
MIRT650196 DOCK7 dedicator of cytokinesis 7 2 2
MIRT654789 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT655667 NUP43 nucleoporin 43 2 2
MIRT655925 NDUFA4P1 NDUFA4, mitochondrial complex associated pseudogene 1 2 2
MIRT656433 MARCH6 membrane associated ring-CH-type finger 6 2 2
MIRT657713 GPC4 glypican 4 2 2
MIRT659302 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT659844 CAPZB capping actin protein of muscle Z-line beta subunit 2 2
MIRT660660 ANKFY1 ankyrin repeat and FYVE domain containing 1 2 2
MIRT661308 CPM carboxypeptidase M 2 2
MIRT661473 CHMP1B charged multivesicular body protein 1B 2 2
MIRT661906 EBNA1BP2 EBNA1 binding protein 2 2 2
MIRT662064 ZNF284 zinc finger protein 284 2 2
MIRT662491 ANGPT4 angiopoietin 4 2 2
MIRT662657 LRRC47 leucine rich repeat containing 47 2 2
MIRT662804 MSRB2 methionine sulfoxide reductase B2 2 2
MIRT663164 FGFR1OP FGFR1 oncogene partner 2 2
MIRT663376 ZNF770 zinc finger protein 770 2 4
MIRT663418 ZNF607 zinc finger protein 607 2 2
MIRT663990 WDR75 WD repeat domain 75 2 2
MIRT664157 APOBEC3F apolipoprotein B mRNA editing enzyme catalytic subunit 3F 2 4
MIRT664489 POLR3K RNA polymerase III subunit K 2 2
MIRT665058 CCDC77 coiled-coil domain containing 77 2 2
MIRT665080 CRIPT CXXC repeat containing interactor of PDZ3 domain 2 2
MIRT665420 WDR55 WD repeat domain 55 2 2
MIRT665716 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT665923 TBC1D19 TBC1 domain family member 19 2 4
MIRT666239 SLC38A7 solute carrier family 38 member 7 2 4
MIRT666840 PPTC7 PTC7 protein phosphatase homolog 2 2
MIRT667378 MOB1B MOB kinase activator 1B 2 2
MIRT667573 LONRF2 LON peptidase N-terminal domain and ring finger 2 2 2
MIRT667894 ING1 inhibitor of growth family member 1 2 2
MIRT667977 HECTD3 HECT domain E3 ubiquitin protein ligase 3 2 2
MIRT668197 GCNT4 glucosaminyl (N-acetyl) transferase 4, core 2 2 2
MIRT668279 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 2
MIRT668386 FAT3 FAT atypical cadherin 3 2 2
MIRT668444 FAM208A family with sequence similarity 208 member A 2 2
MIRT668998 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669180 CCNF cyclin F 2 2
MIRT669444 ATL3 atlastin GTPase 3 2 2
MIRT669661 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT669890 KIAA0754 KIAA0754 2 4
MIRT669973 SSR3 signal sequence receptor subunit 3 2 2
MIRT670153 SLC29A4 solute carrier family 29 member 4 2 2
MIRT670240 TRIM13 tripartite motif containing 13 2 2
MIRT670274 CBY3 chibby family member 3 2 2
MIRT670358 ULBP3 UL16 binding protein 3 2 4
MIRT670627 BVES blood vessel epicardial substance 2 2
MIRT670731 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670770 TRIM66 tripartite motif containing 66 2 2
MIRT670913 DESI1 desumoylating isopeptidase 1 2 2
MIRT671216 CLSTN1 calsyntenin 1 2 2
MIRT671398 ERCC6L2 ERCC excision repair 6 like 2 2 2
MIRT671427 TOX4 TOX high mobility group box family member 4 2 2
MIRT671654 TRUB2 TruB pseudouridine synthase family member 2 2 4
MIRT671702 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT672136 PLEKHH1 pleckstrin homology, MyTH4 and FERM domain containing H1 2 2
MIRT672395 SLC10A6 solute carrier family 10 member 6 2 2
MIRT672508 GGCX gamma-glutamyl carboxylase 2 2
MIRT672572 RNF24 ring finger protein 24 2 2
MIRT672789 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT673019 RBBP4 RB binding protein 4, chromatin remodeling factor 2 2
MIRT673190 C10orf76 chromosome 10 open reading frame 76 2 2
MIRT673372 ZNF124 zinc finger protein 124 2 2
MIRT673495 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT673852 CAPN7 calpain 7 2 2
MIRT673929 ZNF500 zinc finger protein 500 2 2
MIRT673986 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 2 2
MIRT674076 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674123 RPL7L1 ribosomal protein L7 like 1 2 2
MIRT674297 THAP5 THAP domain containing 5 2 2
MIRT674370 POLR3D RNA polymerase III subunit D 2 2
MIRT674641 NKRF NFKB repressing factor 2 2
MIRT674665 PLCE1 phospholipase C epsilon 1 2 2
MIRT674725 ZNF451 zinc finger protein 451 2 4
MIRT674779 NPR1 natriuretic peptide receptor 1 2 2
MIRT674889 RASSF9 Ras association domain family member 9 2 2
MIRT675017 SNX1 sorting nexin 1 2 2
MIRT675341 KLHL26 kelch like family member 26 2 2
MIRT675416 CLEC7A C-type lectin domain containing 7A 2 2
MIRT675497 HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 2 2
MIRT675615 EHD2 EH domain containing 2 2 2
MIRT675735 AHR aryl hydrocarbon receptor 2 2
MIRT675857 ATP1B4 ATPase Na+/K+ transporting family member beta 4 2 2
MIRT675990 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676213 TMEM91 transmembrane protein 91 2 2
MIRT676406 MRO maestro 2 2
MIRT677299 CPSF2 cleavage and polyadenylation specific factor 2 2 2
MIRT677387 PCNP PEST proteolytic signal containing nuclear protein 2 2
MIRT677859 ABI2 abl interactor 2 2 2
MIRT677965 ITGB3 integrin subunit beta 3 2 2
MIRT678175 CRCP CGRP receptor component 2 2
MIRT678273 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT678665 SCUBE3 signal peptide, CUB domain and EGF like domain containing 3 2 2
MIRT679003 TTC39B tetratricopeptide repeat domain 39B 2 2
MIRT679053 RMDN1 regulator of microtubule dynamics 1 2 2
MIRT679461 RHOF ras homolog family member F, filopodia associated 2 2
MIRT679513 RAB36 RAB36, member RAS oncogene family 2 2
MIRT679914 ZKSCAN3 zinc finger with KRAB and SCAN domains 3 2 2
MIRT680029 OSBPL2 oxysterol binding protein like 2 2 4
MIRT680245 NDUFA7 NADH:ubiquinone oxidoreductase subunit A7 2 2
MIRT680279 AKIP1 A-kinase interacting protein 1 2 2
MIRT680499 PRIM2 DNA primase subunit 2 2 2
MIRT680586 ZNF573 zinc finger protein 573 2 2
MIRT680629 KIAA1456 KIAA1456 2 2
MIRT680819 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT680998 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT681122 INTS7 integrator complex subunit 7 2 2
MIRT681161 IBA57 IBA57 homolog, iron-sulfur cluster assembly 2 2
MIRT681221 DUSP19 dual specificity phosphatase 19 2 2
MIRT681304 IKZF3 IKAROS family zinc finger 3 2 2
MIRT681341 BRI3BP BRI3 binding protein 2 2
MIRT681608 F2RL2 coagulation factor II thrombin receptor like 2 2 2
MIRT681779 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681892 SLC11A2 solute carrier family 11 member 2 2 2
MIRT682084 ITGA3 integrin subunit alpha 3 2 4
MIRT682139 SMS spermine synthase 2 2
MIRT682217 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682367 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682535 EXOSC2 exosome component 2 2 2
MIRT682618 COX6B1 cytochrome c oxidase subunit 6B1 2 2
MIRT683643 ZNF695 zinc finger protein 695 2 2
MIRT684008 FOLR1 folate receptor 1 2 2
MIRT684442 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684855 ZNF749 zinc finger protein 749 2 2
MIRT684956 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685044 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685095 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685382 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT685456 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT685810 SLC27A1 solute carrier family 27 member 1 2 2
MIRT685913 MOCS3 molybdenum cofactor synthesis 3 2 2
MIRT686665 TMEM120B transmembrane protein 120B 2 2
MIRT686955 SFT2D2 SFT2 domain containing 2 2 2
MIRT687118 QPCTL glutaminyl-peptide cyclotransferase like 2 2
MIRT687739 KIAA1328 KIAA1328 2 2
MIRT688063 GLUL glutamate-ammonia ligase 2 2
MIRT688191 FNIP1 folliculin interacting protein 1 2 2
MIRT688769 CDH7 cadherin 7 2 2
MIRT688979 ATP6AP1 ATPase H+ transporting accessory protein 1 2 2
MIRT689572 NUDT7 nudix hydrolase 7 2 2
MIRT689683 TMPRSS12 transmembrane protease, serine 12 2 2
MIRT689930 MANSC1 MANSC domain containing 1 2 2
MIRT690089 PNMA2 paraneoplastic Ma antigen 2 2 2
MIRT690190 C5orf45 MRN complex interacting protein 2 2
MIRT690246 CAMLG calcium modulating ligand 2 2
MIRT690411 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT690840 DSN1 DSN1 homolog, MIS12 kinetochore complex component 2 2
MIRT690889 FUT2 fucosyltransferase 2 2 2
MIRT691107 ADIPOQ adiponectin, C1Q and collagen domain containing 2 2
MIRT691229 DFNB59 pejvakin 2 2
MIRT691300 ZNF681 zinc finger protein 681 2 2
MIRT691366 GP5 glycoprotein V platelet 2 2
MIRT691797 WARS tryptophanyl-tRNA synthetase 2 2
MIRT692142 CEP104 centrosomal protein 104 2 2
MIRT692572 NCMAP non-compact myelin associated protein 2 2
MIRT692649 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT692744 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT693092 SCNM1 sodium channel modifier 1 2 2
MIRT693296 SYTL3 synaptotagmin like 3 2 2
MIRT693392 ZNF460 zinc finger protein 460 2 2
MIRT693530 ZNF708 zinc finger protein 708 2 2
MIRT693562 PIGR polymeric immunoglobulin receptor 2 2
MIRT694492 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT694722 LLGL1 LLGL1, scribble cell polarity complex component 2 2
MIRT694866 ZNF417 zinc finger protein 417 2 2
MIRT695070 ZNF17 zinc finger protein 17 2 2
MIRT695451 COX18 COX18, cytochrome c oxidase assembly factor 2 2
MIRT695724 ZNF117 zinc finger protein 117 2 2
MIRT695898 MED16 mediator complex subunit 16 2 2
MIRT696244 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT696259 TACO1 translational activator of cytochrome c oxidase I 2 2
MIRT696512 C3 complement C3 2 2
MIRT696560 TTC21B tetratricopeptide repeat domain 21B 2 2
MIRT696643 AGXT2 alanine--glyoxylate aminotransferase 2 2 2
MIRT696791 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT696819 PLLP plasmolipin 2 2
MIRT697088 GPKOW G-patch domain and KOW motifs 2 2
MIRT697153 INMT indolethylamine N-methyltransferase 2 2
MIRT697202 ZYG11A zyg-11 family member A, cell cycle regulator 2 2
MIRT697322 ZNF641 zinc finger protein 641 2 2
MIRT697578 YME1L1 YME1 like 1 ATPase 2 2
MIRT697619 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT698619 TES testin LIM domain protein 2 2
MIRT698804 STK38 serine/threonine kinase 38 2 2
MIRT698949 SPAST spastin 2 2
MIRT699083 SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 2 2
MIRT699430 SLC1A5 solute carrier family 1 member 5 2 2
MIRT699550 SIT1 signaling threshold regulating transmembrane adaptor 1 2 2
MIRT700324 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT700360 RAB33B RAB33B, member RAS oncogene family 2 2
MIRT700462 PURB purine rich element binding protein B 2 2
MIRT701677 MYADM myeloid associated differentiation marker 2 2
MIRT701757 MSL2 MSL complex subunit 2 2 2
MIRT701977 MIER3 MIER family member 3 2 2
MIRT703178 GPBP1 GC-rich promoter binding protein 1 2 2
MIRT703203 GOLGA3 golgin A3 2 2
MIRT703359 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT703425 FYTTD1 forty-two-three domain containing 1 2 2
MIRT703484 FNDC3B fibronectin type III domain containing 3B 2 2
MIRT703590 FBXO45 F-box protein 45 2 2
MIRT703806 EVI5 ecotropic viral integration site 5 2 2
MIRT703915 EPG5 ectopic P-granules autophagy protein 5 homolog 2 2
MIRT704234 DHDDS dehydrodolichyl diphosphate synthase subunit 2 2
MIRT704646 CLCC1 chloride channel CLIC like 1 2 2
MIRT705151 C11orf58 chromosome 11 open reading frame 58 2 2
MIRT705480 ASXL2 additional sex combs like 2, transcriptional regulator 2 2
MIRT705530 ARL10 ADP ribosylation factor like GTPase 10 2 2
MIRT705661 ANKRD40 ankyrin repeat domain 40 2 2
MIRT706144 ZNF674 zinc finger protein 674 2 2
MIRT706473 SNX27 sorting nexin family member 27 2 2
MIRT708254 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT708838 SCAND3 zinc finger BED-type containing 9 1 1
MIRT710437 BTNL3 butyrophilin like 3 2 2
MIRT711325 DPYSL5 dihydropyrimidinase like 5 2 2
MIRT716151 RBM48 RNA binding motif protein 48 2 2
MIRT717402 ZCCHC24 zinc finger CCHC-type containing 24 2 2
MIRT720866 ADCY5 adenylate cyclase 5 2 2
MIRT722226 ZNF503 zinc finger protein 503 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-1273h-5p Paclitaxel 36314 NSC125973 approved sensitive High Ovarian Cancer cell line (SKOV3)
hsa-miR-1273h-5p Tripterygium wilfordii Hook F resistant tissue
hsa-miR-1273h-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (MGC-803)

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