pre-miRNA Information
pre-miRNA hsa-mir-4680   
Genomic Coordinates chr10: 110898090 - 110898155
Description Homo sapiens miR-4680 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4680-5p
Sequence 5| AGAACUCUUGCAGUCUUAGAUGU |27
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1274530692 2 dbSNP
rs780271274 5 dbSNP
rs1461423681 7 dbSNP
rs749729920 8 dbSNP
rs1252920446 10 dbSNP
rs201739274 11 dbSNP
rs774971106 19 dbSNP
rs748132091 22 dbSNP
rs773643180 22 dbSNP
rs1235425484 23 dbSNP
Putative Targets

Gene Information
Gene Symbol POU3F1   
Synonyms OCT6, OTF6, SCIP
Description POU class 3 homeobox 1
Transcript NM_002699   
Expression
Putative miRNA Targets on POU3F1
3'UTR of POU3F1
(miRNA target sites are highlighted)
>POU3F1|NM_002699|3'UTR
   1 CCCCGCGGGCCGGGCCCCCGCCGGCGCGCTGCAGGGCGCGGGCGCGCAGCCCGCCCGCGCGGCCTGGACTCTTTTTGTTC
  81 GGTTGCTTTGGATTTTACAAAAAAAAAAAAAAGCCCAGAAACTTTCGAACAAAACCAAACACCCGGACGACCCTCTCCGG
 161 TGAGCGGCGAAGACAGCCCGGTAGGCTGCGTCGCCCGAGCCCCGGGAGAGAGGAGCGAAGATCCGGAACTCGCCAACTCA
 241 CCCCGGGCATCCTGCCCGCCGCCTGCTCTCTGCCCCCATCCCCTCGACGACCCCCGCCCCTGCCCCCCCGGGCTGTTCGG
 321 GGCCGGATCCCGGCAGCGGCCTCCCCAAAGCGACAGGTAACGCAGTGCGGGGTTAGGGATTCCCCGGGAGAGAGGACGAA
 401 GCGAGGAGAGTTCTCCATCCCCTCTCCCCGCGTGGACTCCTGAGCCTGCGGGTCCAGGGTGGGGGGCTGTCACTTTATTC
 481 GCTACACGCCTCTTCTCTCCTATAAGGATGCGCCCCACCCCGCTTTCCCCTTTCTCCGGGCTTGGTTTTTTACGGTTTTT
 561 ATTTATTCGTGGAGCCTCTCGGCTCCTGGGGTCCTTCTAACTCCGCCCGCGCCCTTAATTTAAATCGCAGTATACTGTAT
 641 TTATCGGGGCCCCGGAGGGGAGGTCGCGAGAGCCGCGTCTGTGTATAAAAGCAGGAAATAGCCAAAGCTTTAATCTAGCC
 721 TAATTTATTTTTCCCCTTATATTTCCCTACCCTACCCTCCCCCCAAAAAAAAGCAAAAAAAAAAAAAAAAAACTAACAAA
 801 AAAAATTCGAGTGTTCATTTTTCGTTTCGTTTCATCCGAGCCCCGGCTTGGTTCCCGGCCACGCCGGAGGGGTCTGCGCT
 881 CCCACACACCCAGACGGGAAGGGGCTTCTGCCCTGCTGCAGACCGACCGCCGCATAGCGCGGCCCCTGCTCCCCGCGGGG
 961 CCCTGCCCTCCTGGCCACACCAAACGAAACTTGGAAAAGTTAGAGAGATTGTTTTTTAACCAGCTGTAGAAATAAGCCGT
1041 TCCCTGAGAACCCTCCGCCTGATTCCCTGCAGCTTCCCTCTGCTCCCTTTCCAGCCCGCCGGGATGCGGGATGCCAGGGG
1121 AGGCCGGGAGAGAAATTCCCCAAGTTTGGGGTGAGGTGGGAACCATGTAAATATGTGAGATATGTACACACTGGCGGGGA
1201 GAAGAAACATTTTGTGCTTGGTTTTTATTTTTGGTTTTCCGGGTTACCCTTCCTTCCTACCCTAAAGGATTTTGTACACT
1281 GACTAATCCGAAAAAGATATTTTAATATGATTTCCGAATTTCTGACCCATCTCTATTTATTTTCTGGATGTGTTTGGAGC
1361 TTCCCCCTTCTCCGTTTCTTCTTCTGTTTGTTAAGGTTTGAATTTAAATTTTGTTATTTTATTTTTATTATTTTTTGAAA
1441 CAATGTTTCGGTGCATTCTCTTTGTATCTTTATTGAAAAAAAAATAATGTAGACTGGGAAGTTCCCTTTATATTTATGTT
1521 ATAGTAAATATTTTATT
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' uguagaUUCUG--ACG---UUCUCAAGa 5'
                |:|||   ||   :||||||| 
Target 5' ggagagAGGACGAAGCGAGGAGAGTTCt 3'
387 - 414 147.00 -15.40
2
miRNA  3' uguagaUUCUGACGUUCUCAAGa 5'
                || | | |:|| |||| 
Target 5' aacaaaAAAAATTCGAGTGTTCa 3'
795 - 817 125.00 -7.10
3
miRNA  3' ugUAGAUUCUGACGUUCUCAAGa 5'
            || | |||||| :| ||||| 
Target 5' taATGT-AGACTGGGA-AGTTCc 3'
1485 - 1505 120.00 -12.80
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30542487 1 COSMIC
COSN30573293 52 COSMIC
COSN1103926 98 COSMIC
COSN31516564 126 COSMIC
COSN8468673 127 COSMIC
COSN26645543 135 COSMIC
COSN26642673 142 COSMIC
COSN31483187 169 COSMIC
COSN26548559 196 COSMIC
COSN24893786 208 COSMIC
COSN20613904 330 COSMIC
COSN30543746 382 COSMIC
COSN19600687 487 COSMIC
COSN8468672 588 COSMIC
COSN28684035 610 COSMIC
COSN6035188 611 COSMIC
COSN26554257 702 COSMIC
COSN31527946 725 COSMIC
COSN25712299 758 COSMIC
COSN20090206 774 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1267493344 5 dbSNP
rs770926851 12 dbSNP
rs1409422004 13 dbSNP
rs1289290650 14 dbSNP
rs1222369126 15 dbSNP
rs1321218030 16 dbSNP
rs1352563482 18 dbSNP
rs1272428766 20 dbSNP
rs1331642323 22 dbSNP
rs1352040906 35 dbSNP
rs975030851 36 dbSNP
rs767682114 37 dbSNP
rs1390674001 39 dbSNP
rs1210399427 40 dbSNP
rs758202970 42 dbSNP
rs1181005390 46 dbSNP
rs1252004249 47 dbSNP
rs968614852 50 dbSNP
rs1367419097 51 dbSNP
rs1473396491 55 dbSNP
rs865795161 55 dbSNP
rs1186131725 56 dbSNP
rs878942304 61 dbSNP
rs1033837704 71 dbSNP
rs1372587071 73 dbSNP
rs1413199271 74 dbSNP
rs1243702681 77 dbSNP
rs1307599015 77 dbSNP
rs1245413362 82 dbSNP
rs1285953934 85 dbSNP
rs1339980794 89 dbSNP
rs1202758799 92 dbSNP
rs1482138469 96 dbSNP
rs981449688 98 dbSNP
rs1483810806 113 dbSNP
rs35099707 113 dbSNP
rs764634354 113 dbSNP
rs1021875439 117 dbSNP
rs1228420379 125 dbSNP
rs1307138607 131 dbSNP
rs1388792914 136 dbSNP
rs1295419769 142 dbSNP
rs1449415877 145 dbSNP
rs1169574946 156 dbSNP
rs868690938 160 dbSNP
rs563255985 167 dbSNP
rs1464712630 173 dbSNP
rs956776101 177 dbSNP
rs1402997724 183 dbSNP
rs1397793054 200 dbSNP
rs1031018589 201 dbSNP
rs1362887552 204 dbSNP
rs1227616966 209 dbSNP
rs1298028091 226 dbSNP
rs1344112450 235 dbSNP
rs1230598047 238 dbSNP
rs1345295715 239 dbSNP
rs1201620776 241 dbSNP
rs1003520027 243 dbSNP
rs941245555 244 dbSNP
rs1189833188 247 dbSNP
rs1250273722 258 dbSNP
rs909814197 261 dbSNP
rs1175804801 273 dbSNP
rs1045330701 277 dbSNP
rs1467795723 285 dbSNP
rs982554573 287 dbSNP
rs970930981 290 dbSNP
rs929814702 298 dbSNP
rs1462121415 300 dbSNP
rs1434256721 306 dbSNP
rs922463513 308 dbSNP
rs976528597 309 dbSNP
rs1038260582 310 dbSNP
rs940809122 310 dbSNP
rs964139124 318 dbSNP
rs1235008843 319 dbSNP
rs907642520 323 dbSNP
rs1265671851 324 dbSNP
rs1327935646 326 dbSNP
rs1209902434 343 dbSNP
rs1270505660 350 dbSNP
rs1487800382 351 dbSNP
rs1445965405 365 dbSNP
rs1268537269 368 dbSNP
rs1017920889 372 dbSNP
rs1051471480 382 dbSNP
rs932979554 383 dbSNP
rs989159575 384 dbSNP
rs921589270 385 dbSNP
rs1457772234 386 dbSNP
rs1161475852 402 dbSNP
rs1346841649 405 dbSNP
rs958253619 406 dbSNP
rs1292698490 410 dbSNP
rs374679177 413 dbSNP
rs969022158 414 dbSNP
rs1406378047 420 dbSNP
rs1252320648 422 dbSNP
rs1349500908 424 dbSNP
rs548300433 429 dbSNP
rs1289706353 437 dbSNP
rs1031240854 441 dbSNP
rs1320405571 442 dbSNP
rs914441003 442 dbSNP
rs989066152 443 dbSNP
rs955851083 445 dbSNP
rs1196172142 449 dbSNP
rs776000785 455 dbSNP
rs906692634 456 dbSNP
rs1025603000 466 dbSNP
rs1225054444 467 dbSNP
rs970739736 467 dbSNP
rs1024036502 471 dbSNP
rs529733104 474 dbSNP
rs895239416 475 dbSNP
rs1350249039 476 dbSNP
rs1426245216 483 dbSNP
rs1037636546 486 dbSNP
rs1369504993 488 dbSNP
rs149981726 488 dbSNP
rs886473009 496 dbSNP
rs1046968964 502 dbSNP
rs1243249860 502 dbSNP
rs1376406848 508 dbSNP
rs1016491523 512 dbSNP
rs1314154168 517 dbSNP
rs540820053 521 dbSNP
rs1308085788 522 dbSNP
rs922423191 526 dbSNP
rs113103101 527 dbSNP
rs1041284263 528 dbSNP
rs1483485902 537 dbSNP
rs1051545947 538 dbSNP
rs1305768862 553 dbSNP
rs942436317 560 dbSNP
rs1182524553 561 dbSNP
rs1414365192 572 dbSNP
rs910994316 575 dbSNP
rs772572718 580 dbSNP
rs1365650784 583 dbSNP
rs900189163 587 dbSNP
rs989254338 596 dbSNP
rs1039097380 598 dbSNP
rs1365485426 601 dbSNP
rs1356929128 604 dbSNP
rs1446567853 605 dbSNP
rs368510380 608 dbSNP
rs1472119880 611 dbSNP
rs1385560768 614 dbSNP
rs947045363 619 dbSNP
rs1249378263 624 dbSNP
rs923634936 624 dbSNP
rs1297291180 626 dbSNP
rs1343387421 630 dbSNP
rs978364810 632 dbSNP
rs1216543843 648 dbSNP
rs914493909 653 dbSNP
rs971389398 663 dbSNP
rs1210848771 664 dbSNP
rs1239318754 666 dbSNP
rs988650555 673 dbSNP
rs934504300 674 dbSNP
rs1247172420 675 dbSNP
rs1449924728 677 dbSNP
rs1169437613 682 dbSNP
rs1422554261 696 dbSNP
rs1025105243 697 dbSNP
rs773614607 713 dbSNP
rs1176114111 715 dbSNP
rs1407718616 724 dbSNP
rs1378648008 725 dbSNP
rs1433509541 729 dbSNP
rs186256033 738 dbSNP
rs543472483 739 dbSNP
rs371912492 741 dbSNP
rs1273466841 742 dbSNP
rs1023689126 747 dbSNP
rs1238992572 749 dbSNP
rs1220075939 750 dbSNP
rs866826225 754 dbSNP
rs1327236769 755 dbSNP
rs1285592690 756 dbSNP
rs1406392710 757 dbSNP
rs1024656037 758 dbSNP
rs1447532350 759 dbSNP
rs1322284232 760 dbSNP
rs576349320 763 dbSNP
rs1386539701 764 dbSNP
rs7412444 765 dbSNP
rs991245077 772 dbSNP
rs1157789253 773 dbSNP
rs1402984771 773 dbSNP
rs201731676 773 dbSNP
rs879046762 774 dbSNP
rs1285355441 775 dbSNP
rs1437471596 775 dbSNP
rs1178405370 776 dbSNP
rs77586752 776 dbSNP
rs1480877553 777 dbSNP
rs28650302 780 dbSNP
rs28702711 781 dbSNP
rs1246392927 786 dbSNP
rs963370421 789 dbSNP
rs1016935199 791 dbSNP
rs62676861 792 dbSNP
rs1206775894 793 dbSNP
rs1287488886 793 dbSNP
rs1315089158 793 dbSNP
rs1363830738 793 dbSNP
rs397738479 793 dbSNP
rs5773610 793 dbSNP
rs75613156 793 dbSNP
rs762026903 793 dbSNP
rs766231350 793 dbSNP
rs1161914053 794 dbSNP
rs138024979 794 dbSNP
rs1390468279 795 dbSNP
rs879066788 797 dbSNP
rs1305322039 798 dbSNP
rs1368996647 798 dbSNP
rs1409402640 799 dbSNP
rs1262539555 813 dbSNP
rs1204995334 816 dbSNP
rs1012840070 817 dbSNP
rs370424030 842 dbSNP
rs1005128778 863 dbSNP
rs1282427148 865 dbSNP
rs1355541373 868 dbSNP
rs574865293 871 dbSNP
rs1030486655 872 dbSNP
rs1481886662 873 dbSNP
rs1323768585 874 dbSNP
rs1250628530 889 dbSNP
rs1273839788 890 dbSNP
rs572568015 896 dbSNP
rs1327617683 897 dbSNP
rs1344222684 898 dbSNP
rs1038758697 902 dbSNP
rs947045800 903 dbSNP
rs1318411489 904 dbSNP
rs34860389 906 dbSNP
rs1169394984 907 dbSNP
rs539193081 910 dbSNP
rs1394426558 913 dbSNP
rs994066949 916 dbSNP
rs1333568733 918 dbSNP
rs1339846488 919 dbSNP
rs1178294878 930 dbSNP
rs901098638 931 dbSNP
rs1316921006 934 dbSNP
rs1339735994 934 dbSNP
rs1227216240 936 dbSNP
rs773997179 941 dbSNP
rs1470158562 945 dbSNP
rs35823623 947 dbSNP
rs934558121 954 dbSNP
rs571971648 958 dbSNP
rs928508402 961 dbSNP
rs942492841 964 dbSNP
rs1462175496 970 dbSNP
rs1476518568 970 dbSNP
rs911087722 974 dbSNP
rs1185908072 980 dbSNP
rs550416855 987 dbSNP
rs1246582520 991 dbSNP
rs538143574 995 dbSNP
rs1171550302 997 dbSNP
rs1188076032 1006 dbSNP
rs1375052020 1009 dbSNP
rs569661758 1010 dbSNP
rs1172098139 1012 dbSNP
rs1406857157 1020 dbSNP
rs978167210 1029 dbSNP
rs963738601 1031 dbSNP
rs909194800 1042 dbSNP
rs970973714 1045 dbSNP
rs1295995458 1053 dbSNP
rs1230556227 1054 dbSNP
rs559365458 1054 dbSNP
rs1254919567 1057 dbSNP
rs1323542331 1068 dbSNP
rs1205014955 1087 dbSNP
rs1030553665 1089 dbSNP
rs1245555180 1091 dbSNP
rs918181162 1097 dbSNP
rs1464826095 1098 dbSNP
rs745320145 1098 dbSNP
rs369744531 1100 dbSNP
rs1264254201 1103 dbSNP
rs959525909 1108 dbSNP
rs1276963500 1115 dbSNP
rs1198354737 1117 dbSNP
rs1016428368 1120 dbSNP
rs1481497169 1122 dbSNP
rs1006225419 1123 dbSNP
rs1217046633 1125 dbSNP
rs950813442 1126 dbSNP
rs1289258301 1128 dbSNP
rs1386800376 1129 dbSNP
rs1026286112 1138 dbSNP
rs1300249311 1140 dbSNP
rs1345739315 1141 dbSNP
rs547873915 1151 dbSNP
rs1227092832 1156 dbSNP
rs1362901263 1157 dbSNP
rs1329113835 1164 dbSNP
rs1217070576 1171 dbSNP
rs28418984 1176 dbSNP
rs778395005 1186 dbSNP
rs1209611921 1199 dbSNP
rs899678832 1200 dbSNP
rs1269938289 1201 dbSNP
rs1453311657 1209 dbSNP
rs901868628 1210 dbSNP
rs1180151570 1214 dbSNP
rs1411275618 1219 dbSNP
rs529781950 1224 dbSNP
rs1159664336 1225 dbSNP
rs1006844825 1231 dbSNP
rs1039514487 1233 dbSNP
rs889620774 1234 dbSNP
rs1053621550 1241 dbSNP
rs1302282547 1242 dbSNP
rs1411856935 1248 dbSNP
rs1397548224 1251 dbSNP
rs558986037 1261 dbSNP
rs55870461 1262 dbSNP
rs907132791 1264 dbSNP
rs1224832030 1278 dbSNP
rs1168007621 1279 dbSNP
rs55784678 1283 dbSNP
rs1320429503 1285 dbSNP
rs756821781 1296 dbSNP
rs1292919083 1315 dbSNP
rs1490909772 1322 dbSNP
rs748918453 1328 dbSNP
rs1203220720 1333 dbSNP
rs1251182463 1343 dbSNP
rs1045602300 1354 dbSNP
rs902271610 1359 dbSNP
rs1252645023 1360 dbSNP
rs1042029555 1361 dbSNP
rs540108960 1362 dbSNP
rs948574173 1365 dbSNP
rs1162731402 1367 dbSNP
rs1385579053 1368 dbSNP
rs1426178065 1373 dbSNP
rs41268251 1384 dbSNP
rs1442376220 1386 dbSNP
rs749081166 1386 dbSNP
rs1472760786 1387 dbSNP
rs917617503 1391 dbSNP
rs1236082165 1393 dbSNP
rs1452491855 1400 dbSNP
rs1316194483 1402 dbSNP
rs1361960029 1408 dbSNP
rs991031143 1409 dbSNP
rs1207134718 1411 dbSNP
rs576352574 1416 dbSNP
rs1226648627 1417 dbSNP
rs1272641237 1421 dbSNP
rs1055642908 1427 dbSNP
rs1206767687 1430 dbSNP
rs541161594 1433 dbSNP
rs1439170291 1436 dbSNP
rs942124612 1443 dbSNP
rs1243532859 1449 dbSNP
rs374636908 1450 dbSNP
rs1186427082 1458 dbSNP
rs1418410808 1471 dbSNP
rs1410149695 1472 dbSNP
rs938269924 1473 dbSNP
rs1339379307 1476 dbSNP
rs1356880688 1476 dbSNP
rs1469747955 1478 dbSNP
rs376798290 1482 dbSNP
rs200879858 1485 dbSNP
rs747031517 1485 dbSNP
rs923535000 1485 dbSNP
rs976330637 1485 dbSNP
rs1228743881 1486 dbSNP
rs965273659 1489 dbSNP
rs1017751189 1490 dbSNP
rs984939834 1496 dbSNP
rs1276606016 1497 dbSNP
rs1322830326 1498 dbSNP
rs1204380666 1518 dbSNP
rs1263741193 1518 dbSNP
rs1462577444 1524 dbSNP
rs1206631170 1529 dbSNP
rs1241261297 1533 dbSNP
rs564849581 1535 dbSNP
rs950780110 1541 dbSNP
rs543733392 1556 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084078. RNA binding protein: AGO2. Condition:CLIP_nohippuristanol_rep2_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' uguagaUUCUG--ACG---UUCUCAaga 5'
                |:|||   ||   :|||||   
Target 5' ggagagAGGACGAAGCGAGGAGAGU--- 3'
2 - 26
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084078
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_nohippuristanol_rep2_AbnovaAb
Location of target site ENST00000373012.2 | 3UTR | GGGAGAGAGGACGAAGCGAGGAGAGU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
133 hsa-miR-4680-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT378771 MACC1 MACC1, MET transcriptional regulator 2 2
MIRT393867 ZDHHC21 zinc finger DHHC-type containing 21 2 4
MIRT446684 C2CD2 C2 calcium dependent domain containing 2 2 2
MIRT447600 MRPL3 mitochondrial ribosomal protein L3 2 2
MIRT450708 RNF152 ring finger protein 152 2 2
MIRT450784 PAPOLG poly(A) polymerase gamma 2 2
MIRT454623 COL23A1 collagen type XXIII alpha 1 chain 2 8
MIRT461620 PTCD3 pentatricopeptide repeat domain 3 2 2
MIRT462695 SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 2 2
MIRT475530 HOXA3 homeobox A3 2 8
MIRT475739 HERPUD1 homocysteine inducible ER protein with ubiquitin like domain 1 2 4
MIRT489676 CYP1A1 cytochrome P450 family 1 subfamily A member 1 2 2
MIRT490610 SLC47A1 solute carrier family 47 member 1 2 2
MIRT493628 HIC2 HIC ZBTB transcriptional repressor 2 2 2
MIRT496152 RPS15A ribosomal protein S15a 2 2
MIRT499232 VAV3 vav guanine nucleotide exchange factor 3 2 4
MIRT501496 PRICKLE2 prickle planar cell polarity protein 2 2 2
MIRT507163 GAS2L3 growth arrest specific 2 like 3 2 2
MIRT512389 MTRNR2L1 MT-RNR2-like 1 2 4
MIRT514626 MTRNR2L7 MT-RNR2-like 7 2 2
MIRT517474 PEX26 peroxisomal biogenesis factor 26 2 2
MIRT525332 CNGB1 cyclic nucleotide gated channel beta 1 2 2
MIRT526685 BAK1 BCL2 antagonist/killer 1 2 2
MIRT527317 CCR2 C-C motif chemokine receptor 2 2 2
MIRT527608 EYS eyes shut homolog (Drosophila) 2 2
MIRT528794 RAB32 RAB32, member RAS oncogene family 2 2
MIRT531048 TIPARP TCDD inducible poly(ADP-ribose) polymerase 2 2
MIRT532254 TBPL2 TATA-box binding protein like 2 2 2
MIRT533801 TMED7 transmembrane p24 trafficking protein 7 2 4
MIRT535887 MLEC malectin 2 2
MIRT540704 PDPK1 3-phosphoinositide dependent protein kinase 1 2 4
MIRT544645 PHF8 PHD finger protein 8 2 4
MIRT545760 HS3ST1 heparan sulfate-glucosamine 3-sulfotransferase 1 2 2
MIRT555310 PPP2R5C protein phosphatase 2 regulatory subunit B'gamma 2 2
MIRT555877 PAFAH1B2 platelet activating factor acetylhydrolase 1b catalytic subunit 2 2 4
MIRT559507 ARID5B AT-rich interaction domain 5B 2 2
MIRT560448 SLC30A7 solute carrier family 30 member 7 2 2
MIRT561262 ZIK1 zinc finger protein interacting with K protein 1 2 2
MIRT561795 PAWR pro-apoptotic WT1 regulator 2 2
MIRT567007 KLHL15 kelch like family member 15 2 2
MIRT569298 SURF6 surfeit 6 2 2
MIRT570606 MTRNR2L11 MT-RNR2-like 11 2 2
MIRT572888 ADCY2 adenylate cyclase 2 2 2
MIRT573119 ADAMTS18 ADAM metallopeptidase with thrombospondin type 1 motif 18 2 2
MIRT608332 ZNF670 zinc finger protein 670 2 6
MIRT614942 KCNK5 potassium two pore domain channel subfamily K member 5 2 2
MIRT615324 ERN1 endoplasmic reticulum to nucleus signaling 1 2 2
MIRT618441 ZNF800 zinc finger protein 800 2 2
MIRT620110 HARBI1 harbinger transposase derived 1 2 2
MIRT626008 ZNF517 zinc finger protein 517 2 2
MIRT626626 SLC30A6 solute carrier family 30 member 6 2 2
MIRT627842 POU3F1 POU class 3 homeobox 1 2 2
MIRT628386 CACNB2 calcium voltage-gated channel auxiliary subunit beta 2 2 2
MIRT629305 PTPLAD2 3-hydroxyacyl-CoA dehydratase 4 1 1
MIRT629864 GATAD1 GATA zinc finger domain containing 1 2 2
MIRT630444 IDE insulin degrading enzyme 2 2
MIRT631854 PIGG phosphatidylinositol glycan anchor biosynthesis class G 2 2
MIRT633173 AGO3 argonaute 3, RISC catalytic component 2 2
MIRT633477 ZNF724P zinc finger protein 724 2 2
MIRT634395 PLSCR1 phospholipid scramblase 1 2 2
MIRT635538 TRIM72 tripartite motif containing 72 2 2
MIRT635821 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT636169 TIMM8A translocase of inner mitochondrial membrane 8A 2 2
MIRT636797 CYB5D1 cytochrome b5 domain containing 1 2 2
MIRT637952 IVD isovaleryl-CoA dehydrogenase 2 2
MIRT645136 HES2 hes family bHLH transcription factor 2 2 2
MIRT645667 ADK adenosine kinase 2 2
MIRT646148 FLVCR1 feline leukemia virus subgroup C cellular receptor 1 2 2
MIRT647004 NCR3LG1 natural killer cell cytotoxicity receptor 3 ligand 1 2 2
MIRT648187 C2orf68 chromosome 2 open reading frame 68 2 2
MIRT650090 TERF2 telomeric repeat binding factor 2 2 2
MIRT650329 RTN2 reticulon 2 2 2
MIRT654224 RNF165 ring finger protein 165 2 2
MIRT654545 RAB1A RAB1A, member RAS oncogene family 2 2
MIRT656457 MAPK14 mitogen-activated protein kinase 14 2 2
MIRT656828 KLF8 Kruppel like factor 8 2 2
MIRT657112 ITPRIPL2 inositol 1,4,5-trisphosphate receptor interacting protein like 2 2 2
MIRT657930 GATSL2 cytosolic arginine sensor for mTORC1 subunit 2 2 2
MIRT659375 CREG2 cellular repressor of E1A stimulated genes 2 2 2
MIRT659833 CARHSP1 calcium regulated heat stable protein 1 2 2
MIRT662108 LACTB lactamase beta 2 4
MIRT662789 TBC1D25 TBC1 domain family member 25 2 2
MIRT669501 ARL3 ADP ribosylation factor like GTPase 3 2 2
MIRT669759 ZNF101 zinc finger protein 101 2 4
MIRT669800 GAN gigaxonin 2 2
MIRT670050 RPP14 ribonuclease P/MRP subunit p14 2 2
MIRT670299 RBBP4 RB binding protein 4, chromatin remodeling factor 2 2
MIRT670388 EMP2 epithelial membrane protein 2 2 2
MIRT672862 C22orf29 retrotransposon Gag like 10 2 2
MIRT672890 FXN frataxin 2 2
MIRT673210 C10orf76 chromosome 10 open reading frame 76 2 2
MIRT674001 KCNN3 potassium calcium-activated channel subfamily N member 3 2 2
MIRT674163 BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 2 2
MIRT674502 TIRAP TIR domain containing adaptor protein 2 2
MIRT675470 NUBPL nucleotide binding protein like 2 2
MIRT675671 TMOD2 tropomodulin 2 2 2
MIRT676006 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676074 TIMM50 translocase of inner mitochondrial membrane 50 2 2
MIRT676386 SEC24D SEC24 homolog D, COPII coat complex component 2 2
MIRT676764 SNX2 sorting nexin 2 2 2
MIRT676896 GABPB1 GA binding protein transcription factor beta subunit 1 2 2
MIRT676978 ZNF708 zinc finger protein 708 2 2
MIRT677236 C15orf40 chromosome 15 open reading frame 40 2 2
MIRT677369 HSPA4L heat shock protein family A (Hsp70) member 4 like 2 2
MIRT677464 PDLIM3 PDZ and LIM domain 3 2 2
MIRT678081 EIF2A eukaryotic translation initiation factor 2A 2 2
MIRT678093 ATCAY ATCAY, caytaxin 2 2
MIRT678324 FBLIM1 filamin binding LIM protein 1 2 2
MIRT678417 ANKRD36 ankyrin repeat domain 36 2 2
MIRT678521 ZNF347 zinc finger protein 347 2 2
MIRT678700 TRIP11 thyroid hormone receptor interactor 11 2 2
MIRT678829 PDE6A phosphodiesterase 6A 2 2
MIRT679991 RUNDC1 RUN domain containing 1 2 2
MIRT680751 PSD4 pleckstrin and Sec7 domain containing 4 2 2
MIRT681249 ZNF383 zinc finger protein 383 2 2
MIRT681422 GTF3C6 general transcription factor IIIC subunit 6 2 2
MIRT681948 SLC19A3 solute carrier family 19 member 3 2 2
MIRT689278 C5AR2 complement component 5a receptor 2 2 2
MIRT690389 PARP15 poly(ADP-ribose) polymerase family member 15 2 2
MIRT691845 OSCAR osteoclast associated, immunoglobulin-like receptor 2 2
MIRT693863 IYD iodotyrosine deiodinase 2 2
MIRT696002 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT701930 MLLT1 MLLT1, super elongation complex subunit 2 2
MIRT702341 KLHL7 kelch like family member 7 2 2
MIRT703557 FKBP14 FK506 binding protein 14 2 2
MIRT705033 CACUL1 CDK2 associated cullin domain 1 2 2
MIRT706341 STAC2 SH3 and cysteine rich domain 2 2 2
MIRT709671 RGP1 RGP1 homolog, RAB6A GEF complex partner 1 2 2
MIRT711212 EFHB EF-hand domain family member B 2 2
MIRT718342 PURA purine rich element binding protein A 2 2
MIRT722755 SIRPB2 signal regulatory protein beta 2 2 2
MIRT723535 NFATC2IP nuclear factor of activated T-cells 2 interacting protein 2 2
MIRT724498 BFAR bifunctional apoptosis regulator 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4680-5p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)

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