pre-miRNA Information
pre-miRNA hsa-mir-4419b   
Genomic Coordinates chr12: 128244506 - 128244573
Description Homo sapiens miR-4419b stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4419b
Sequence 42| GAGGCUGAAGGAAGAUGG |59
Evidence Experimental
Experiments Illumina
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol WIZ   
Synonyms ZNF803
Description widely interspaced zinc finger motifs
Transcript NM_021241   
Expression
Putative miRNA Targets on WIZ
3'UTR of WIZ
(miRNA target sites are highlighted)
>WIZ|NM_021241|3'UTR
   1 CACAAAAGCATTCCAGATCCCCTCTCGTGCCACCTCTGTCTCCTCTTCTTCCTCCTCTGTGTCCTTGTCCCTCTTCCTCT
  81 TTCTTTCCGTTTCCAAAGGAGCAAGCCAAAACCTCAAACCGGCGCCCCTTGGGGGCCGGGCACACTACAGCCAGGGCGCC
 161 GGGAGCCAGCTAGCTGCCCTTCCCCCAGCCCGAGGACTCTGGGGCCACAGGGTGTCTTCCTTCAGCCCATGCCCACCTGG
 241 TCCAGCAGGGGCAGCAGCCAGGTCTCTGATGGCAGCCGGTCTGGTCACAGGGGAGGACAGCACTCCCCCGTCTAGCAGCC
 321 AGGCAGGGCGATGTCTGCCATCCGTGGCCATTTGCAAAGACCCCAAAGACCCCTGTTCTGGTTCCCTCTCTCCCCCATGA
 401 ATATCCTCTCACACACATGTACATGCGAACACACACAACACGCACCTCGTGAGACCCGGGACCTGCCCCGGACCCCCAGT
 481 TCCTGGGTTGAACGACCACATCATGCCACGGTGCTTGCTCAGGGGAAGCCACGCTCCCTCTGTGGGGCCTGCTGGGGCCT
 561 GGGAGCCCCCCACTGAGCCCACAATGCCACGGAAATCCTTGTTGGCTGCCCCCGAGAGGGGCCTTCCCAGCTGGGAAGAG
 641 CTCAGAGCTGACAGCTGCCTCCTGCCATGTCAAGGCCCCCCAAAGAGCCTCAGGGGCTCTGGGGCCCTGGAGGGTGGGGT
 721 TGGGGGGTGGGACTCTCCTCCCCCACTCCTGCTCCCTCTCCCTTTTCACTGTTGCTTTCTATGTATAGCTCCCTAGACCT
 801 TTCACTTTTTTAAAAACGCGTTTTGTGTAGAGAATAAGGAACGTGGATCTTTTTATTTTGCAATCCTGGGCCAGCTAGAA
 881 GCCAGGAGCTGATTGACCTTTTAACTTTTTTCAGTGGCCACATTTTGGTTATCGATGTACCTAGAAGTATGTAAATTAGA
 961 TTAAATTTCTCTTCTGGAAACACCCTGGGGCAGGCGGCCAGCGTGTGTTTTTCTGTCAAGTGGACAGGCTGGCATTGGCT
1041 GGCAGCCGGGGCTGGGATCGGGGCCTCCTCTGTCCAGAGCGCCATGGAGGCCCTGGGTTTTCCAGTTGGCCGCCAAGCCG
1121 ACCAGACGCAGCTGGGGATGAGCCCAAGTTCCCAGCTGTTGGCTCTTTAGGCCATGGCTGGGAGGGGGTCTCTGGCTGGC
1201 TGGCAAAGCGGCTCCAGTGAGCAGATGAACCAGGGTTCTGGGCAGCCTGTCTGGGAAGGGAGCCAGGATCAAGAAGCAGT
1281 TGAGGCTAGAGGAGCTTATCAAAGGCAGGAGCTACCAGCGAGGGTGTCAGGGACCCGTTGGGAGCATTTGGGTGGGGGCC
1361 AGTGGGGTTGTAGAGAGCTGGAACTCACCTGCTTTTAATACATGTGACTTCTAGTGAGACACATGCACCCCTGACCCAAG
1441 GAACATGCGGGGAAAAGAGGAGCCACTGGCTCCTTTGCGATGTTATTTATTTTCTCGCTCTGCAAATGTTTATTGAACAT
1521 TTCTGAGATTTTAAGAGATTTTGTTGGCTGCTCCTTCTTGTTTATTGCAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ggUAGAAGGAAGUCGGag 5'
            :|||||||||||||  
Target 5' gtGTCTTCCTTCAGCCca 3'
212 - 229 156.00 -24.10
2
miRNA  3' gguagaaggaaGUCGGAg 5'
                     |||||| 
Target 5' agggttctgggCAGCCTg 3'
1232 - 1249 120.00 -10.90
3
miRNA  3' gguaGAAGGAAGUCGGag 5'
              |||||  |||||  
Target 5' tgccCTTCCCCCAGCCcg 3'
175 - 192 110.00 -15.50
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31492718 5 COSMIC
COSN13784966 8 COSMIC
COSN30509429 19 COSMIC
COSN30482998 21 COSMIC
COSN27005087 26 COSMIC
COSN13784965 27 COSMIC
COSN30107985 36 COSMIC
COSN32053087 45 COSMIC
COSN30107999 57 COSMIC
COSN30525911 69 COSMIC
COSN31542907 79 COSMIC
COSN30146083 87 COSMIC
COSN31490392 88 COSMIC
COSN6138461 113 COSMIC
COSN31551601 123 COSMIC
COSN9349003 134 COSMIC
COSN9349002 136 COSMIC
COSN31555933 158 COSMIC
COSN9846428 312 COSMIC
COSN6138460 426 COSMIC
COSN16664720 846 COSMIC
COSN20848383 905 COSMIC
COSN32056173 1279 COSMIC
COSN9349001 1663 COSMIC
COSN22032001 1824 COSMIC
COSN16305113 1874 COSMIC
COSN27882011 1949 COSMIC
COSN7354928 2011 COSMIC
COSN15276966 2501 COSMIC
COSN17223304 2556 COSMIC
COSN5849599 2574 COSMIC
COSN22875598 2881 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs762393609 1 dbSNP
rs200535815 2 dbSNP
rs1193757950 3 dbSNP
rs1481482004 6 dbSNP
rs769327820 8 dbSNP
rs1252967481 9 dbSNP
rs747468941 10 dbSNP
rs1410292374 13 dbSNP
rs768685660 13 dbSNP
rs1321259056 22 dbSNP
rs1285174031 24 dbSNP
rs773431130 26 dbSNP
rs772749107 27 dbSNP
rs1327073652 29 dbSNP
rs556989338 30 dbSNP
rs779511518 32 dbSNP
rs755118754 34 dbSNP
rs1291359142 36 dbSNP
rs749310500 39 dbSNP
rs780386424 41 dbSNP
rs1173745148 43 dbSNP
rs1410114386 46 dbSNP
rs749004954 46 dbSNP
rs756277759 48 dbSNP
rs1307173340 52 dbSNP
rs76959204 52 dbSNP
rs1380080041 54 dbSNP
rs943243080 55 dbSNP
rs911736933 59 dbSNP
rs1343126598 60 dbSNP
rs987226693 64 dbSNP
rs7254099 66 dbSNP
rs1427657964 67 dbSNP
rs919153280 78 dbSNP
rs1256072303 81 dbSNP
rs973507660 84 dbSNP
rs1478290175 87 dbSNP
rs549606841 88 dbSNP
rs1191578501 104 dbSNP
rs1022760413 109 dbSNP
rs991228503 112 dbSNP
rs1167629717 120 dbSNP
rs1368417436 121 dbSNP
rs181424293 123 dbSNP
rs1035860181 124 dbSNP
rs1378369981 126 dbSNP
rs760550398 128 dbSNP
rs1299918017 129 dbSNP
rs1261053825 131 dbSNP
rs1227880824 136 dbSNP
rs1272788264 137 dbSNP
rs1220278567 138 dbSNP
rs1318142239 140 dbSNP
rs1211279108 143 dbSNP
rs1255829736 148 dbSNP
rs1482559371 154 dbSNP
rs188488566 157 dbSNP
rs374158094 158 dbSNP
rs546806004 160 dbSNP
rs1449568494 161 dbSNP
rs903444414 169 dbSNP
rs147533722 174 dbSNP
rs1313991238 176 dbSNP
rs1415903268 183 dbSNP
rs1176508928 184 dbSNP
rs1358433746 185 dbSNP
rs1322487965 186 dbSNP
rs1395983439 186 dbSNP
rs1404316207 187 dbSNP
rs564372699 191 dbSNP
rs550514300 192 dbSNP
rs530725461 194 dbSNP
rs561615613 202 dbSNP
rs1369983629 204 dbSNP
rs1166374990 214 dbSNP
rs541647474 221 dbSNP
rs1310861358 225 dbSNP
rs761224902 226 dbSNP
rs773225960 243 dbSNP
rs1269356555 251 dbSNP
rs1464922399 255 dbSNP
rs1207580366 260 dbSNP
rs1039647724 264 dbSNP
rs1478787001 272 dbSNP
rs149411804 277 dbSNP
rs772159913 278 dbSNP
rs116206524 283 dbSNP
rs1241255862 289 dbSNP
rs751810616 291 dbSNP
rs550800637 293 dbSNP
rs919191051 299 dbSNP
rs1037621010 300 dbSNP
rs117198015 309 dbSNP
rs1293174781 310 dbSNP
rs1365849193 311 dbSNP
rs562643618 314 dbSNP
rs10413192 329 dbSNP
rs991112205 330 dbSNP
rs959792996 343 dbSNP
rs1284312850 344 dbSNP
rs186126511 347 dbSNP
rs1221766839 352 dbSNP
rs1245805721 356 dbSNP
rs978020046 360 dbSNP
rs1184057182 365 dbSNP
rs542581029 366 dbSNP
rs1472222811 370 dbSNP
rs537003604 372 dbSNP
rs1415979283 374 dbSNP
rs529261756 375 dbSNP
rs1348381225 378 dbSNP
rs1381207637 385 dbSNP
rs1411958485 392 dbSNP
rs1308982270 393 dbSNP
rs1350323037 394 dbSNP
rs1011842240 397 dbSNP
rs866085334 398 dbSNP
rs1018249296 399 dbSNP
rs1228422388 408 dbSNP
rs1288592098 410 dbSNP
rs1376645582 411 dbSNP
rs1356788324 412 dbSNP
rs1206938769 414 dbSNP
rs3177570 416 dbSNP
rs868280783 417 dbSNP
rs1473138696 418 dbSNP
rs1162715955 419 dbSNP
rs1407322489 419 dbSNP
rs1411768187 423 dbSNP
rs1047118827 426 dbSNP
rs993777455 427 dbSNP
rs897649871 441 dbSNP
rs1428222555 448 dbSNP
rs778528891 449 dbSNP
rs760442198 457 dbSNP
rs941958492 458 dbSNP
rs1447997272 460 dbSNP
rs1283086160 463 dbSNP
rs560148558 466 dbSNP
rs915804374 469 dbSNP
rs1383304467 470 dbSNP
rs1274914821 472 dbSNP
rs1180441279 473 dbSNP
rs1055481253 476 dbSNP
rs1280529670 481 dbSNP
rs1442899695 486 dbSNP
rs1440019324 493 dbSNP
rs938313420 496 dbSNP
rs1451421369 499 dbSNP
rs181492369 503 dbSNP
rs1389812539 505 dbSNP
rs1447948216 509 dbSNP
rs556067459 510 dbSNP
rs928409752 517 dbSNP
rs977192946 518 dbSNP
rs1452945106 523 dbSNP
rs1414389978 524 dbSNP
rs1332786548 525 dbSNP
rs967500868 532 dbSNP
rs1208720091 533 dbSNP
rs1436685998 534 dbSNP
rs1297811970 542 dbSNP
rs1363981706 549 dbSNP
rs1224835181 551 dbSNP
rs1276388680 552 dbSNP
rs1345519212 562 dbSNP
rs1199745832 565 dbSNP
rs763300291 573 dbSNP
rs914751465 577 dbSNP
rs1466275079 584 dbSNP
rs775315783 590 dbSNP
rs990700215 591 dbSNP
rs1426957945 602 dbSNP
rs536124158 609 dbSNP
rs1378516020 610 dbSNP
rs1477908730 611 dbSNP
rs1241529245 613 dbSNP
rs566987661 614 dbSNP
rs986788205 615 dbSNP
rs1439108587 620 dbSNP
rs1320601618 622 dbSNP
rs1387356997 626 dbSNP
rs1380154845 631 dbSNP
rs1325129171 633 dbSNP
rs1331399746 634 dbSNP
rs1331889042 640 dbSNP
rs1323222297 645 dbSNP
rs1281203226 659 dbSNP
rs1403110437 662 dbSNP
rs1229002489 665 dbSNP
rs1267574267 666 dbSNP
rs1362554706 676 dbSNP
rs955370960 678 dbSNP
rs1451346455 679 dbSNP
rs1197684448 682 dbSNP
rs1254467554 686 dbSNP
rs1026182630 691 dbSNP
rs1420267845 694 dbSNP
rs547162256 699 dbSNP
rs898534616 700 dbSNP
rs1016114416 705 dbSNP
rs1006027936 708 dbSNP
rs1246857361 723 dbSNP
rs1352169267 725 dbSNP
rs780396970 726 dbSNP
rs1287655685 728 dbSNP
rs894424471 728 dbSNP
rs1055700286 730 dbSNP
rs1489608010 732 dbSNP
rs938364065 735 dbSNP
rs1355869935 738 dbSNP
rs1264742105 741 dbSNP
rs756409308 744 dbSNP
rs1483592637 745 dbSNP
rs1041740128 750 dbSNP
rs1249070205 754 dbSNP
rs1416736801 760 dbSNP
rs1188987533 761 dbSNP
rs1368613567 762 dbSNP
rs1161301961 777 dbSNP
rs1372108034 781 dbSNP
rs1430203639 782 dbSNP
rs1297488729 785 dbSNP
rs1371065668 787 dbSNP
rs945837753 789 dbSNP
rs1313526688 798 dbSNP
rs1340005041 799 dbSNP
rs1243977756 803 dbSNP
rs1277038561 805 dbSNP
rs539554431 809 dbSNP
rs914277827 817 dbSNP
rs990362630 819 dbSNP
rs942854553 820 dbSNP
rs1484525275 826 dbSNP
rs1063168 835 dbSNP
rs911514711 836 dbSNP
rs1282837255 843 dbSNP
rs10408467 845 dbSNP
rs15308 855 dbSNP
rs1443488969 859 dbSNP
rs1181329397 861 dbSNP
rs570572160 863 dbSNP
rs1449750861 864 dbSNP
rs1346157987 865 dbSNP
rs1169446469 874 dbSNP
rs1352614396 878 dbSNP
rs1467509147 884 dbSNP
rs1303370781 905 dbSNP
rs1405354036 912 dbSNP
rs987004192 922 dbSNP
rs955587180 933 dbSNP
rs577187028 934 dbSNP
rs1228033780 935 dbSNP
rs1025646808 936 dbSNP
rs1221935766 941 dbSNP
rs1342411802 957 dbSNP
rs973118325 971 dbSNP
rs1460447760 976 dbSNP
rs1201207164 979 dbSNP
rs1298855636 985 dbSNP
rs1399532574 989 dbSNP
rs1465064331 990 dbSNP
rs894028947 995 dbSNP
rs1052587954 996 dbSNP
rs1017418739 1002 dbSNP
rs1006080359 1003 dbSNP
rs1176647012 1013 dbSNP
rs1425631710 1013 dbSNP
rs1400017013 1015 dbSNP
rs894306852 1017 dbSNP
rs550577643 1019 dbSNP
rs1322598854 1033 dbSNP
rs906651080 1035 dbSNP
rs1046463214 1041 dbSNP
rs1002795734 1047 dbSNP
rs530786867 1048 dbSNP
rs1370134287 1059 dbSNP
rs1220201209 1063 dbSNP
rs916602937 1066 dbSNP
rs945691538 1071 dbSNP
rs892910599 1074 dbSNP
rs1443305461 1078 dbSNP
rs973771254 1080 dbSNP
rs561727042 1081 dbSNP
rs1489309761 1084 dbSNP
rs909790400 1104 dbSNP
rs986890859 1105 dbSNP
rs982648853 1111 dbSNP
rs1320248990 1120 dbSNP
rs1279148483 1127 dbSNP
rs750804696 1128 dbSNP
rs1400228293 1130 dbSNP
rs1359968188 1131 dbSNP
rs1268293392 1147 dbSNP
rs548224076 1157 dbSNP
rs1302921411 1158 dbSNP
rs976548212 1168 dbSNP
rs963013442 1169 dbSNP
rs964096103 1172 dbSNP
rs1289528822 1174 dbSNP
rs1373376457 1185 dbSNP
rs910005094 1187 dbSNP
rs1281580369 1188 dbSNP
rs1323111819 1189 dbSNP
rs1335813137 1189 dbSNP
rs1468089657 1190 dbSNP
rs1222851939 1194 dbSNP
rs1402016019 1206 dbSNP
rs1290691039 1209 dbSNP
rs1170956870 1210 dbSNP
rs528380175 1212 dbSNP
rs781632820 1216 dbSNP
rs1184212301 1228 dbSNP
rs1252485425 1234 dbSNP
rs1017949046 1243 dbSNP
rs1469608722 1245 dbSNP
rs1175524734 1257 dbSNP
rs559333900 1266 dbSNP
rs1416137542 1268 dbSNP
rs959406847 1276 dbSNP
rs990912571 1276 dbSNP
rs757818901 1278 dbSNP
rs1034205448 1279 dbSNP
rs1416801447 1282 dbSNP
rs1184068196 1284 dbSNP
rs751568231 1288 dbSNP
rs1335659143 1289 dbSNP
rs1010982095 1291 dbSNP
rs545934727 1294 dbSNP
rs971367796 1301 dbSNP
rs576871450 1304 dbSNP
rs771945428 1308 dbSNP
rs1020603212 1309 dbSNP
rs958322867 1311 dbSNP
rs1031194942 1315 dbSNP
rs879781913 1315 dbSNP
rs999677118 1319 dbSNP
rs764289689 1320 dbSNP
rs1207008779 1327 dbSNP
rs1046975687 1331 dbSNP
rs745672745 1331 dbSNP
rs1012334690 1335 dbSNP
rs563337366 1336 dbSNP
rs1037739495 1337 dbSNP
rs377704582 1338 dbSNP
rs1383641112 1349 dbSNP
rs543461413 1352 dbSNP
rs1451611051 1354 dbSNP
rs1169585101 1358 dbSNP
rs1396309439 1367 dbSNP
rs574511770 1370 dbSNP
rs763081450 1372 dbSNP
rs1360352038 1376 dbSNP
rs374523336 1377 dbSNP
rs1452764915 1378 dbSNP
rs1335562692 1379 dbSNP
rs1380083652 1386 dbSNP
rs1230247537 1387 dbSNP
rs909821478 1389 dbSNP
rs554587801 1392 dbSNP
rs1305794502 1393 dbSNP
rs934137705 1398 dbSNP
rs1270540642 1401 dbSNP
rs1047029351 1402 dbSNP
rs752899694 1405 dbSNP
rs1292075329 1406 dbSNP
rs1229011094 1407 dbSNP
rs1461787724 1412 dbSNP
rs1203085768 1418 dbSNP
rs941589511 1420 dbSNP
rs539376411 1422 dbSNP
rs1466417659 1424 dbSNP
rs1194233827 1428 dbSNP
rs573438312 1436 dbSNP
rs909878961 1438 dbSNP
rs1174783929 1439 dbSNP
rs922465601 1440 dbSNP
rs79022140 1443 dbSNP
rs963863413 1444 dbSNP
rs370353847 1448 dbSNP
rs1436756966 1449 dbSNP
rs189901656 1453 dbSNP
rs769929235 1463 dbSNP
rs1352446357 1465 dbSNP
rs1428411009 1465 dbSNP
rs989130842 1466 dbSNP
rs957688394 1469 dbSNP
rs1276447186 1472 dbSNP
rs1222895417 1473 dbSNP
rs971636274 1476 dbSNP
rs570635043 1479 dbSNP
rs1020235537 1481 dbSNP
rs773174663 1486 dbSNP
rs1010576447 1496 dbSNP
rs1030595749 1497 dbSNP
rs1385157523 1498 dbSNP
rs999750479 1505 dbSNP
rs550691023 1512 dbSNP
rs1239201381 1518 dbSNP
rs1480389081 1525 dbSNP
rs1174926767 1528 dbSNP
rs971346885 1530 dbSNP
rs1025147782 1532 dbSNP
rs1454922748 1539 dbSNP
rs1006483820 1550 dbSNP
rs1158738345 1550 dbSNP
rs185825683 1553 dbSNP
rs1404195472 1556 dbSNP
rs1281338181 1560 dbSNP
rs568159113 1561 dbSNP
rs1239838291 1563 dbSNP
rs1050781284 1569 dbSNP
rs1479768037 1570 dbSNP
rs1348805214 1571 dbSNP
rs1211917778 1583 dbSNP
rs371916389 1584 dbSNP
rs1490290568 1585 dbSNP
rs1038171261 1588 dbSNP
rs1037165389 1589 dbSNP
rs1290876530 1595 dbSNP
rs941627649 1596 dbSNP
rs368088414 1598 dbSNP
rs548563365 1601 dbSNP
rs1355536768 1602 dbSNP
rs375222723 1603 dbSNP
rs1165097201 1605 dbSNP
rs886460801 1607 dbSNP
rs1365888621 1613 dbSNP
rs1047723003 1616 dbSNP
rs1055161844 1618 dbSNP
rs193085013 1619 dbSNP
rs1372299281 1621 dbSNP
rs1370713373 1622 dbSNP
rs1391966385 1625 dbSNP
rs922504405 1626 dbSNP
rs150658540 1632 dbSNP
rs982186040 1633 dbSNP
rs1316034057 1634 dbSNP
rs1359107790 1635 dbSNP
rs942509916 1636 dbSNP
rs552099919 1637 dbSNP
rs1195784089 1642 dbSNP
rs1249136993 1649 dbSNP
rs957529307 1661 dbSNP
rs1032878295 1663 dbSNP
rs989202908 1664 dbSNP
rs1422020547 1674 dbSNP
rs1443677289 1675 dbSNP
rs71334767 1682 dbSNP
rs1381527056 1687 dbSNP
rs936401314 1693 dbSNP
rs923611038 1694 dbSNP
rs1158817688 1697 dbSNP
rs977692890 1699 dbSNP
rs1417772033 1729 dbSNP
rs971036008 1730 dbSNP
rs773723487 1732 dbSNP
rs532315462 1734 dbSNP
rs1490193630 1743 dbSNP
rs991024995 1754 dbSNP
rs1244144218 1757 dbSNP
rs563450407 1761 dbSNP
rs959790228 1762 dbSNP
rs1250157722 1776 dbSNP
rs543574896 1779 dbSNP
rs1204986671 1782 dbSNP
rs1243295154 1784 dbSNP
rs529805071 1785 dbSNP
rs560911833 1786 dbSNP
rs564517287 1787 dbSNP
rs141694628 1793 dbSNP
rs997923750 1794 dbSNP
rs945470013 1797 dbSNP
rs913956835 1805 dbSNP
rs748755741 1811 dbSNP
rs553604856 1812 dbSNP
rs942604385 1822 dbSNP
rs111618793 1823 dbSNP
rs1293932350 1824 dbSNP
rs1314460238 1826 dbSNP
rs889635922 1832 dbSNP
rs1224728842 1838 dbSNP
rs867803884 1841 dbSNP
rs546158912 1846 dbSNP
rs935818239 1856 dbSNP
rs1053512096 1866 dbSNP
rs577060330 1867 dbSNP
rs1201344635 1870 dbSNP
rs1243513208 1880 dbSNP
rs1379756838 1886 dbSNP
rs1177010777 1902 dbSNP
rs1480214995 1904 dbSNP
rs1427522990 1906 dbSNP
rs1195923198 1911 dbSNP
rs1185681130 1914 dbSNP
rs557125786 1917 dbSNP
rs925910708 1918 dbSNP
rs936432366 1918 dbSNP
rs1200073081 1920 dbSNP
rs923683224 1922 dbSNP
rs1428599451 1927 dbSNP
rs111692279 1929 dbSNP
rs953929470 1930 dbSNP
rs1262263949 1931 dbSNP
rs977764984 1944 dbSNP
rs1204496390 1949 dbSNP
rs747182741 1954 dbSNP
rs1287475927 1959 dbSNP
rs571281058 1961 dbSNP
rs779629699 1964 dbSNP
rs961449242 1968 dbSNP
rs918201936 1969 dbSNP
rs1344273693 1975 dbSNP
rs991499793 1979 dbSNP
rs1322383263 1987 dbSNP
rs959613504 2001 dbSNP
rs1418801552 2003 dbSNP
rs575203505 2006 dbSNP
rs189648584 2011 dbSNP
rs888610749 2012 dbSNP
rs746198019 2017 dbSNP
rs568171386 2031 dbSNP
rs1026384756 2038 dbSNP
rs1479439928 2040 dbSNP
rs554673473 2042 dbSNP
rs1405033236 2043 dbSNP
rs757691262 2046 dbSNP
rs747616230 2049 dbSNP
rs1469666007 2050 dbSNP
rs1157206662 2052 dbSNP
rs1367809792 2055 dbSNP
rs778146468 2057 dbSNP
rs1425715110 2062 dbSNP
rs534980537 2068 dbSNP
rs565856142 2073 dbSNP
rs1364218025 2091 dbSNP
rs1445072770 2099 dbSNP
rs376099753 2101 dbSNP
rs1280770009 2105 dbSNP
rs901854488 2114 dbSNP
rs1373439937 2117 dbSNP
rs1222783125 2121 dbSNP
rs1173103397 2123 dbSNP
rs371822276 2131 dbSNP
rs373211611 2132 dbSNP
rs1290851666 2133 dbSNP
rs1007222223 2134 dbSNP
rs889665689 2135 dbSNP
rs1053582186 2136 dbSNP
rs137912810 2143 dbSNP
rs1191167220 2149 dbSNP
rs532432154 2150 dbSNP
rs1445515090 2152 dbSNP
rs569905486 2153 dbSNP
rs549997896 2156 dbSNP
rs949133668 2164 dbSNP
rs1412074231 2165 dbSNP
rs917578893 2167 dbSNP
rs935870476 2170 dbSNP
rs56339335 2174 dbSNP
rs1054767199 2181 dbSNP
rs865873560 2185 dbSNP
rs1328744516 2189 dbSNP
rs1384540761 2190 dbSNP
rs909463178 2195 dbSNP
rs1049528657 2213 dbSNP
rs529817366 2214 dbSNP
rs1273660778 2220 dbSNP
rs1306900087 2226 dbSNP
rs1245111512 2229 dbSNP
rs1339429755 2230 dbSNP
rs984981973 2234 dbSNP
rs1224673927 2235 dbSNP
rs1342770304 2236 dbSNP
rs1476611517 2237 dbSNP
rs1316441169 2251 dbSNP
rs976848262 2253 dbSNP
rs561004349 2254 dbSNP
rs1452294116 2256 dbSNP
rs1419396912 2259 dbSNP
rs950849648 2263 dbSNP
rs919396472 2265 dbSNP
rs1167903555 2267 dbSNP
rs908324481 2274 dbSNP
rs983880763 2285 dbSNP
rs1333560646 2287 dbSNP
rs1410712106 2288 dbSNP
rs952402412 2289 dbSNP
rs1270595542 2295 dbSNP
rs184128945 2300 dbSNP
rs1216780387 2301 dbSNP
rs1265018304 2307 dbSNP
rs527311483 2308 dbSNP
rs564712387 2309 dbSNP
rs546131507 2310 dbSNP
rs970994869 2311 dbSNP
rs1276800801 2316 dbSNP
rs1449003386 2317 dbSNP
rs1025204978 2318 dbSNP
rs1396102192 2320 dbSNP
rs1477095763 2322 dbSNP
rs1202233945 2344 dbSNP
rs1010021909 2357 dbSNP
rs1469892783 2360 dbSNP
rs966115095 2361 dbSNP
rs752846852 2363 dbSNP
rs1402155703 2366 dbSNP
rs1459570061 2367 dbSNP
rs1386943284 2372 dbSNP
rs1318710170 2374 dbSNP
rs577120263 2382 dbSNP
rs557138190 2385 dbSNP
rs1285145736 2389 dbSNP
rs1000907276 2397 dbSNP
rs115055300 2408 dbSNP
rs1180322173 2417 dbSNP
rs1273194362 2418 dbSNP
rs1353104458 2422 dbSNP
rs1205960571 2424 dbSNP
rs954000640 2427 dbSNP
rs1487530875 2428 dbSNP
rs1225307494 2429 dbSNP
rs1049578325 2431 dbSNP
rs1480421896 2433 dbSNP
rs1197548867 2437 dbSNP
rs932469575 2444 dbSNP
rs1158788318 2447 dbSNP
rs765517890 2456 dbSNP
rs755292334 2458 dbSNP
rs555522556 2460 dbSNP
rs939900586 2463 dbSNP
rs908206321 2468 dbSNP
rs750223803 2473 dbSNP
rs1299212611 2475 dbSNP
rs1337619571 2476 dbSNP
rs767405694 2479 dbSNP
rs1279213534 2481 dbSNP
rs78139134 2483 dbSNP
rs1248589124 2489 dbSNP
rs555017088 2491 dbSNP
rs534783592 2492 dbSNP
rs566098959 2495 dbSNP
rs1208589884 2498 dbSNP
rs761656194 2509 dbSNP
rs191732630 2519 dbSNP
rs1182018474 2520 dbSNP
rs779274857 2524 dbSNP
rs909494195 2530 dbSNP
rs1165233496 2531 dbSNP
rs1327107783 2531 dbSNP
rs1049354900 2537 dbSNP
rs1388532719 2541 dbSNP
rs747419616 2549 dbSNP
rs1366296106 2555 dbSNP
rs1009828917 2556 dbSNP
rs1303644433 2557 dbSNP
rs1423895201 2563 dbSNP
rs774282379 2567 dbSNP
rs145253661 2568 dbSNP
rs569919026 2574 dbSNP
rs929521890 2580 dbSNP
rs1374953375 2581 dbSNP
rs1454838074 2586 dbSNP
rs1032358212 2589 dbSNP
rs1359176277 2594 dbSNP
rs550016559 2595 dbSNP
rs762405817 2596 dbSNP
rs1253614420 2605 dbSNP
rs1340739984 2611 dbSNP
rs919427562 2620 dbSNP
rs1237104998 2621 dbSNP
rs141523650 2625 dbSNP
rs1185058408 2627 dbSNP
rs1160072511 2628 dbSNP
rs1243488407 2632 dbSNP
rs567329288 2634 dbSNP
rs1162490553 2641 dbSNP
rs1050467833 2655 dbSNP
rs186892284 2656 dbSNP
rs182950097 2659 dbSNP
rs957352674 2660 dbSNP
rs1454716804 2661 dbSNP
rs572862750 2668 dbSNP
rs1337670385 2672 dbSNP
rs1378833037 2677 dbSNP
rs192204555 2678 dbSNP
rs79101494 2688 dbSNP
rs886994779 2695 dbSNP
rs775019264 2696 dbSNP
rs1315564961 2703 dbSNP
rs8110422 2707 dbSNP
rs926396947 2714 dbSNP
rs1482748074 2716 dbSNP
rs1288862252 2717 dbSNP
rs138785357 2721 dbSNP
rs745577060 2723 dbSNP
rs563601493 2724 dbSNP
rs1192864791 2725 dbSNP
rs1421519041 2729 dbSNP
rs1471008976 2729 dbSNP
rs1350424532 2736 dbSNP
rs1277954942 2740 dbSNP
rs918093761 2743 dbSNP
rs1464791277 2756 dbSNP
rs1235737013 2760 dbSNP
rs1290984688 2762 dbSNP
rs1346432931 2763 dbSNP
rs988690516 2768 dbSNP
rs1013418763 2769 dbSNP
rs1276882132 2779 dbSNP
rs543627899 2782 dbSNP
rs1032538607 2783 dbSNP
rs1283446097 2790 dbSNP
rs1311241101 2797 dbSNP
rs1054870640 2805 dbSNP
rs1207605442 2815 dbSNP
rs1262206040 2816 dbSNP
rs979442109 2818 dbSNP
rs575003184 2822 dbSNP
rs1215742790 2824 dbSNP
rs561306005 2826 dbSNP
rs554799559 2836 dbSNP
rs1363635469 2844 dbSNP
rs1481398281 2852 dbSNP
rs1048720686 2858 dbSNP
rs929551670 2860 dbSNP
rs1401018875 2861 dbSNP
rs1384008300 2863 dbSNP
rs1431596763 2863 dbSNP
rs1156411149 2864 dbSNP
rs1161558562 2867 dbSNP
rs997615471 2868 dbSNP
rs1481198661 2870 dbSNP
rs535936548 2872 dbSNP
rs1040983415 2873 dbSNP
rs1479171370 2880 dbSNP
rs1004439078 2884 dbSNP
rs944874523 2889 dbSNP
rs910653832 2892 dbSNP
rs1244277357 2897 dbSNP
rs1308720537 2898 dbSNP
rs1354027054 2900 dbSNP
rs1239118946 2904 dbSNP
rs541553601 2911 dbSNP
rs1446744434 2912 dbSNP
rs1490815969 2912 dbSNP
rs887052081 2913 dbSNP
rs1246132799 2914 dbSNP
rs986243905 2928 dbSNP
rs1048337122 2934 dbSNP
rs1408948572 2936 dbSNP
rs930998301 2939 dbSNP
rs904867851 2940 dbSNP
rs936061710 2943 dbSNP
rs572444437 2945 dbSNP
rs949181275 2946 dbSNP
rs770527378 2947 dbSNP
rs1425778018 2955 dbSNP
rs1348740465 2958 dbSNP
rs925966076 2972 dbSNP
rs1299422043 2977 dbSNP
rs977386834 2978 dbSNP
rs1342469762 2980 dbSNP
rs988352163 2981 dbSNP
rs966639847 2989 dbSNP
rs1020853921 2999 dbSNP
rs992431466 3001 dbSNP
rs1306732849 3002 dbSNP
rs1431438397 3003 dbSNP
rs1325829350 3004 dbSNP
rs935495287 3008 dbSNP
rs960585545 3009 dbSNP
rs776853948 3026 dbSNP
rs1315942078 3027 dbSNP
rs558994570 3036 dbSNP
rs1470869733 3048 dbSNP
rs1406266513 3049 dbSNP
rs1033908251 3052 dbSNP
rs757830893 3054 dbSNP
rs1457439874 3058 dbSNP
rs1177009792 3061 dbSNP
rs1245315799 3068 dbSNP
rs1421063461 3068 dbSNP
rs1186637242 3071 dbSNP
rs1475361738 3072 dbSNP
rs1445644935 3074 dbSNP
rs1001957583 3079 dbSNP
rs887491129 3080 dbSNP
rs75501183 3082 dbSNP
rs200601002 3083 dbSNP
rs36206067 3086 dbSNP
rs398059588 3086 dbSNP
rs1027356428 3087 dbSNP
rs1412216113 3087 dbSNP
rs538994358 3092 dbSNP
rs143172871 3099 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084044. RNA binding protein: AGO2. Condition:CLIP_noarsenite_rep3 HITS-CLIP data was present in GSM1084047. RNA binding protein: AGO2. Condition:CLIP_arsenite_rep4 HITS-CLIP data was present in GSM1084064. RNA binding protein: AGO2. Condition:CLIP_noemetine_AbnovaAb HITS-CLIP data was present in GSM1084076. RNA binding protein: AGO2. Condition:CLIP_nohippuristanol_rep1_SigmaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084044
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noarsenite_rep3
Location of target site ENST00000389282.4 | 3UTR | UGAUCAGCCUCCCAAAGUGCUGGGAUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1084047
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_arsenite_rep4
Location of target site ENST00000389282.4 | 3UTR | UGAUCAGCCUCCCAAAGUGCUGGGAUUACAGGCGUGA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM1084064
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noemetine_AbnovaAb
Location of target site ENST00000389282.4 | 3UTR | AAGUGAUCAGCCUCCCAAAGUGCUGGGAUUAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM1084076
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_nohippuristanol_rep1_SigmaAb
Location of target site ENST00000389282.4 | 3UTR | AUCAGCCUCCCAAAGUGCUGGGAUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
390 hsa-miR-4419b Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT061343 WEE1 WEE1 G2 checkpoint kinase 2 4
MIRT072743 GLCE glucuronic acid epimerase 2 2
MIRT180549 TXNIP thioredoxin interacting protein 2 2
MIRT186147 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT271044 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT334761 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 6
MIRT443279 TSPAN15 tetraspanin 15 2 2
MIRT447047 ZNF439 zinc finger protein 439 2 2
MIRT447351 KIF6 kinesin family member 6 2 2
MIRT448925 CKS1B CDC28 protein kinase regulatory subunit 1B 2 2
MIRT452899 PSD4 pleckstrin and Sec7 domain containing 4 2 2
MIRT453087 SUMF2 sulfatase modifying factor 2 2 2
MIRT454071 SLC35E3 solute carrier family 35 member E3 2 2
MIRT456216 LIX1L limb and CNS expressed 1 like 2 6
MIRT456951 LRP10 LDL receptor related protein 10 2 2
MIRT458025 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT459999 RFT1 RFT1 homolog 2 2
MIRT460046 CDCP1 CUB domain containing protein 1 2 2
MIRT460982 STK17B serine/threonine kinase 17b 2 2
MIRT464405 URM1 ubiquitin related modifier 1 2 2
MIRT466256 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 2
MIRT466536 TBXA2R thromboxane A2 receptor 2 2
MIRT470922 PLD5 phospholipase D family member 5 2 8
MIRT472835 MTMR10 myotubularin related protein 10 2 6
MIRT473352 MEMO1 mediator of cell motility 1 2 2
MIRT475504 HSP90B1 heat shock protein 90 beta family member 1 2 2
MIRT478862 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT480898 BCL9L B-cell CLL/lymphoma 9 like 2 2
MIRT482686 NXN nucleoredoxin 2 4
MIRT484128 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT486172 TLE3 transducin like enhancer of split 3 2 4
MIRT486539 CLCN7 chloride voltage-gated channel 7 2 2
MIRT486588 ZNF619 zinc finger protein 619 2 2
MIRT495475 ALDOA aldolase, fructose-bisphosphate A 2 2
MIRT495536 TXNRD2 thioredoxin reductase 2 2 2
MIRT495566 UNC5C unc-5 netrin receptor C 2 2
MIRT495719 PADI1 peptidyl arginine deiminase 1 2 2
MIRT495890 CLOCK clock circadian regulator 2 2
MIRT495932 SLC7A5P2 solute carrier family 7 member 5 pseudogene 2 2 2
MIRT496026 ZBED3 zinc finger BED-type containing 3 2 2
MIRT496216 PAX6 paired box 6 2 2
MIRT496349 VAMP1 vesicle associated membrane protein 1 2 2
MIRT496354 PPY pancreatic polypeptide 2 2
MIRT496400 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT496416 PARVB parvin beta 2 2
MIRT496458 N6AMT1 N-6 adenine-specific DNA methyltransferase 1 2 2
MIRT496519 GINS2 GINS complex subunit 2 2 2
MIRT496562 SLC39A9 solute carrier family 39 member 9 2 2
MIRT498605 KRT8 keratin 8 2 2
MIRT503434 SLC25A45 solute carrier family 25 member 45 2 6
MIRT503573 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT503847 ATP13A4 ATPase 13A4 2 4
MIRT504247 LHPP phospholysine phosphohistidine inorganic pyrophosphate phosphatase 2 4
MIRT505606 SLC35F1 solute carrier family 35 member F1 2 2
MIRT507749 CERS2 ceramide synthase 2 2 4
MIRT508411 C1orf210 chromosome 1 open reading frame 210 2 6
MIRT508508 RSRC1 arginine and serine rich coiled-coil 1 2 6
MIRT508944 AK4 adenylate kinase 4 2 4
MIRT509460 ZNF587 zinc finger protein 587 2 6
MIRT509862 ZNF641 zinc finger protein 641 2 4
MIRT511397 IKZF3 IKAROS family zinc finger 3 2 6
MIRT512517 BTBD19 BTB domain containing 19 2 2
MIRT513507 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 2 6
MIRT514155 TMEM145 transmembrane protein 145 2 4
MIRT514486 SLPI secretory leukocyte peptidase inhibitor 2 4
MIRT514521 SHISA9 shisa family member 9 2 2
MIRT514970 KLLN killin, p53-regulated DNA replication inhibitor 2 4
MIRT515030 IRAK4 interleukin 1 receptor associated kinase 4 2 6
MIRT515963 C9orf156 tRNA methyltransferase O 2 2
MIRT516092 ZBTB8OS zinc finger and BTB domain containing 8 opposite strand 2 4
MIRT517223 PRIM1 DNA primase subunit 1 2 4
MIRT517459 PEX26 peroxisomal biogenesis factor 26 2 4
MIRT517790 EFCAB11 EF-hand calcium binding domain 11 2 2
MIRT517979 DSCR3 DSCR3 arrestin fold containing 2 2
MIRT519458 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT519599 ZNF805 zinc finger protein 805 2 2
MIRT520339 UBXN2A UBX domain protein 2A 2 2
MIRT521345 RPP14 ribonuclease P/MRP subunit p14 2 2
MIRT521571 PTPLB 3-hydroxyacyl-CoA dehydratase 2 1 1
MIRT523382 GSG2 histone H3 associated protein kinase 2 8
MIRT524106 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT524886 ARHGAP11A Rho GTPase activating protein 11A 2 4
MIRT528772 CD1D CD1d molecule 2 2
MIRT530665 TRIM56 tripartite motif containing 56 2 2
MIRT531107 PEX13 peroxisomal biogenesis factor 13 2 2
MIRT531575 ILDR1 immunoglobulin like domain containing receptor 1 2 2
MIRT535173 PLEKHB2 pleckstrin homology domain containing B2 2 4
MIRT544168 HEYL hes related family bHLH transcription factor with YRPW motif-like 2 2
MIRT550582 SLC2A5 solute carrier family 2 member 5 2 2
MIRT551039 GDE1 glycerophosphodiester phosphodiesterase 1 2 4
MIRT551295 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT551339 MRE11A MRE11 homolog, double strand break repair nuclease 2 2
MIRT552092 SLFN12L schlafen family member 12 like 2 6
MIRT555403 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT557087 HOXB3 homeobox B3 2 2
MIRT559388 ATP11C ATPase phospholipid transporting 11C 2 2
MIRT560305 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT561028 LIN7C lin-7 homolog C, crumbs cell polarity complex component 2 2
MIRT562460 COX6B1 cytochrome c oxidase subunit 6B1 2 4
MIRT562982 PARK7 Parkinsonism associated deglycase 2 2
MIRT563548 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT564412 EMILIN2 elastin microfibril interfacer 2 2 4
MIRT569437 PCGF3 polycomb group ring finger 3 2 2
MIRT572097 EXOC8 exocyst complex component 8 2 2
MIRT575571 Cd99 CD99 antigen 2 2
MIRT575789 Tnfrsf10b tumor necrosis factor receptor superfamily, member 10b 2 2
MIRT576975 Lmtk2 lemur tyrosine kinase 2 2 2
MIRT610864 ARSA arylsulfatase A 2 2
MIRT614061 NTPCR nucleoside-triphosphatase, cancer-related 2 2
MIRT614141 THAP1 THAP domain containing 1 2 6
MIRT615235 BROX BRO1 domain and CAAX motif containing 2 2
MIRT617429 ANP32E acidic nuclear phosphoprotein 32 family member E 2 4
MIRT618882 MBL2 mannose binding lectin 2 2 2
MIRT618984 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619196 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620323 AQP6 aquaporin 6 2 2
MIRT621960 STX7 syntaxin 7 2 2
MIRT622057 SSBP2 single stranded DNA binding protein 2 2 2
MIRT624930 FBXW2 F-box and WD repeat domain containing 2 2 2
MIRT624986 ZNF665 zinc finger protein 665 2 4
MIRT625463 ZNF681 zinc finger protein 681 2 4
MIRT625497 SMAD9 SMAD family member 9 2 2
MIRT625599 KLHL23 kelch like family member 23 2 2
MIRT625668 C2orf48 chromosome 2 open reading frame 48 2 2
MIRT625888 INADL PATJ, crumbs cell polarity complex component 2 2
MIRT626161 NFYA nuclear transcription factor Y subunit alpha 2 2
MIRT626238 ZNF749 zinc finger protein 749 2 2
MIRT626631 SLC30A6 solute carrier family 30 member 6 2 2
MIRT626994 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627898 OLFML2A olfactomedin like 2A 2 2
MIRT627988 NDRG3 NDRG family member 3 2 2
MIRT628324 CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 2 2
MIRT628549 ZNF701 zinc finger protein 701 2 2
MIRT629464 WIZ widely interspaced zinc finger motifs 2 2
MIRT630527 BAZ2A bromodomain adjacent to zinc finger domain 2A 2 2
MIRT631487 KLHL21 kelch like family member 21 2 2
MIRT631957 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT632178 CCL22 C-C motif chemokine ligand 22 2 2
MIRT632282 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT632321 TMEM185B transmembrane protein 185B 2 2
MIRT632853 IGF1 insulin like growth factor 1 2 2
MIRT632862 HSPA2 heat shock protein family A (Hsp70) member 2 2 2
MIRT633322 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT633398 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633930 DNAH9 dynein axonemal heavy chain 9 2 2
MIRT634785 CBFA2T2 CBFA2/RUNX1 translocation partner 2 2 2
MIRT634851 ABCF1 ATP binding cassette subfamily F member 1 2 2
MIRT636370 OGFRL1 opioid growth factor receptor like 1 2 2
MIRT637219 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT637690 PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D 2 2
MIRT639196 TRAPPC2 trafficking protein particle complex 2 2 2
MIRT639599 CD3EAP CD3e molecule associated protein 2 2
MIRT639681 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT640669 ARSK arylsulfatase family member K 2 2
MIRT642377 ZNF581 zinc finger protein 581 2 2
MIRT642403 ZNF556 zinc finger protein 556 2 2
MIRT645079 UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII 2 2
MIRT646475 ZNF669 zinc finger protein 669 2 2
MIRT647325 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT647490 ZNF639 zinc finger protein 639 2 2
MIRT647989 PDE12 phosphodiesterase 12 2 2
MIRT648196 CENPN centromere protein N 2 2
MIRT649006 MRPL49 mitochondrial ribosomal protein L49 2 2
MIRT650457 ZNF141 zinc finger protein 141 2 2
MIRT650533 CCDC77 coiled-coil domain containing 77 2 2
MIRT650999 ZNF770 zinc finger protein 770 2 2
MIRT653832 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 4
MIRT655734 NRXN3 neurexin 3 2 2
MIRT657577 GRSF1 G-rich RNA sequence binding factor 1 2 2
MIRT658610 ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 2 2
MIRT658633 ENAH ENAH, actin regulator 2 2
MIRT659820 CASP16 caspase 16, pseudogene 2 2
MIRT661142 ZNF43 zinc finger protein 43 2 2
MIRT661201 MPPE1 metallophosphoesterase 1 2 2
MIRT661436 MANSC1 MANSC domain containing 1 2 2
MIRT661498 CHMP1B charged multivesicular body protein 1B 2 2
MIRT661682 ZNF623 zinc finger protein 623 2 2
MIRT661796 NLRC3 NLR family CARD domain containing 3 2 2
MIRT661808 NUP85 nucleoporin 85 2 2
MIRT661861 ZNF766 zinc finger protein 766 2 2
MIRT661889 EXOSC6 exosome component 6 2 2
MIRT662291 SLC29A4 solute carrier family 29 member 4 2 2
MIRT662515 ANGPT4 angiopoietin 4 2 2
MIRT662682 LRRC47 leucine rich repeat containing 47 2 2
MIRT662716 C10orf111 chromosome 10 open reading frame 111 2 4
MIRT662834 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT662890 PCDHA6 protocadherin alpha 6 2 2
MIRT663134 ULBP3 UL16 binding protein 3 2 2
MIRT663710 ABHD17B abhydrolase domain containing 17B 2 2
MIRT663869 MUC20 mucin 20, cell surface associated 2 2
MIRT664267 NMUR1 neuromedin U receptor 1 2 2
MIRT664510 POLR3K RNA polymerase III subunit K 2 2
MIRT664659 TRIM65 tripartite motif containing 65 2 2
MIRT664849 HUS1 HUS1 checkpoint clamp component 2 2
MIRT664944 CARD6 caspase recruitment domain family member 6 2 4
MIRT665348 YES1 YES proto-oncogene 1, Src family tyrosine kinase 2 2
MIRT665514 UTP15 UTP15, small subunit processome component 2 2
MIRT665648 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT665668 TRAF1 TNF receptor associated factor 1 2 2
MIRT665692 TNPO3 transportin 3 2 2
MIRT665741 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT665850 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT665940 TBC1D19 TBC1 domain family member 19 2 4
MIRT666005 SYNJ2BP synaptojanin 2 binding protein 2 2
MIRT666172 SNX27 sorting nexin family member 27 2 4
MIRT666373 SHOX short stature homeobox 2 2
MIRT667004 PDPN podoplanin 2 4
MIRT667185 NR2F6 nuclear receptor subfamily 2 group F member 6 2 4
MIRT667603 LIPC lipase C, hepatic type 2 2
MIRT667828 IRGQ immunity related GTPase Q 2 2
MIRT667862 IPCEF1 interaction protein for cytohesin exchange factors 1 2 2
MIRT668296 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 4
MIRT668463 FAM208A family with sequence similarity 208 member A 2 2
MIRT668580 ELMSAN1 ELM2 and Myb/SANT domain containing 1 2 4
MIRT669012 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669103 CDK19 cyclin dependent kinase 19 2 2
MIRT670073 ZNF783 zinc finger family member 783 2 2
MIRT670326 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT670756 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670964 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT670985 MED17 mediator complex subunit 17 2 2
MIRT671195 ZNF891 zinc finger protein 891 2 2
MIRT672423 SLC10A6 solute carrier family 10 member 6 2 2
MIRT672495 YIPF4 Yip1 domain family member 4 2 2
MIRT672537 MGAM maltase-glucoamylase 2 2
MIRT672749 ZNF585B zinc finger protein 585B 2 4
MIRT673390 ZNF124 zinc finger protein 124 2 2
MIRT673452 ZNF583 zinc finger protein 583 2 2
MIRT673917 DCTN6 dynactin subunit 6 2 2
MIRT673952 ZNF500 zinc finger protein 500 2 2
MIRT674102 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674167 BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 2 2
MIRT674206 FUT2 fucosyltransferase 2 2 2
MIRT674452 PURB purine rich element binding protein B 2 4
MIRT674687 PLCE1 phospholipase C epsilon 1 2 2
MIRT674701 TMEM59 transmembrane protein 59 2 2
MIRT674800 NPR1 natriuretic peptide receptor 1 2 4
MIRT675247 MAK male germ cell associated kinase 2 2
MIRT676012 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676374 APTX aprataxin 2 2
MIRT676834 TNFSF15 TNF superfamily member 15 2 2
MIRT678193 CRCP CGRP receptor component 2 2
MIRT678293 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT679532 RAB36 RAB36, member RAS oncogene family 2 2
MIRT679669 RABAC1 Rab acceptor 1 2 2
MIRT679850 GPR75 G protein-coupled receptor 75 2 2
MIRT680533 PRIM2 DNA primase subunit 2 2 2
MIRT680563 ZNF584 zinc finger protein 584 2 2
MIRT680577 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT680849 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT680888 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1 like 2 2
MIRT680940 EVC EvC ciliary complex subunit 1 2 2
MIRT680964 SLC15A1 solute carrier family 15 member 1 2 4
MIRT681017 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT681065 PAQR7 progestin and adipoQ receptor family member 7 2 2
MIRT681209 ZNF638 zinc finger protein 638 2 2
MIRT681291 RFC2 replication factor C subunit 2 2 2
MIRT681366 BRI3BP BRI3 binding protein 2 2
MIRT681517 STAT2 signal transducer and activator of transcription 2 2 2
MIRT681549 ZNF738 zinc finger protein 738 2 2
MIRT681574 ABHD15 abhydrolase domain containing 15 2 2
MIRT681597 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 2
MIRT681806 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681912 SLC11A2 solute carrier family 11 member 2 2 2
MIRT681953 SLC19A3 solute carrier family 19 member 3 2 2
MIRT682037 AGXT2 alanine--glyoxylate aminotransferase 2 2 4
MIRT682111 ITGA3 integrin subunit alpha 3 2 4
MIRT682190 SLC38A7 solute carrier family 38 member 7 2 2
MIRT682247 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682394 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682554 EXOSC2 exosome component 2 2 2
MIRT682665 CASP8 caspase 8 2 2
MIRT683283 ZNF99 zinc finger protein 99 2 2
MIRT683359 SCARF1 scavenger receptor class F member 1 2 2
MIRT683453 ACOT2 acyl-CoA thioesterase 2 2 2
MIRT683596 GSTCD glutathione S-transferase C-terminal domain containing 2 2
MIRT683661 ZNF695 zinc finger protein 695 2 2
MIRT683770 CPE carboxypeptidase E 2 2
MIRT683807 NOTO notochord homeobox 2 2
MIRT684462 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684525 C1orf174 chromosome 1 open reading frame 174 2 2
MIRT684985 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685012 CXorf56 chromosome X open reading frame 56 2 2
MIRT685072 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685115 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685477 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT685831 SLC27A1 solute carrier family 27 member 1 2 2
MIRT686032 UMPS uridine monophosphate synthetase 2 2
MIRT686559 TPM3 tropomyosin 3 2 2
MIRT687287 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT687309 OTUD7B OTU deubiquitinase 7B 2 2
MIRT688085 GLUL glutamate-ammonia ligase 2 2
MIRT688168 GABPB1 GA binding protein transcription factor beta subunit 1 2 2
MIRT688584 DARS2 aspartyl-tRNA synthetase 2, mitochondrial 2 2
MIRT688601 CYCS cytochrome c, somatic 2 2
MIRT688921 C11orf84 chromosome 11 open reading frame 84 2 2
MIRT689285 C5AR2 complement component 5a receptor 2 2 2
MIRT689622 AKAP6 A-kinase anchoring protein 6 2 2
MIRT690051 C6orf141 chromosome 6 open reading frame 141 2 2
MIRT690224 C5orf45 MRN complex interacting protein 2 2
MIRT690272 CAMLG calcium modulating ligand 2 2
MIRT690331 MRPS30 mitochondrial ribosomal protein S30 2 2
MIRT690480 ZNF33A zinc finger protein 33A 2 2
MIRT690526 ZNF566 zinc finger protein 566 2 2
MIRT690581 MICA MHC class I polypeptide-related sequence A 2 2
MIRT690675 RPF2 ribosome production factor 2 homolog 2 2
MIRT690790 ZNF589 zinc finger protein 589 2 2
MIRT690873 PLEKHG2 pleckstrin homology and RhoGEF domain containing G2 2 2
MIRT691142 HJURP Holliday junction recognition protein 2 2
MIRT691158 APOL6 apolipoprotein L6 2 2
MIRT691288 CENPM centromere protein M 2 2
MIRT691435 PRICKLE4 prickle planar cell polarity protein 4 2 2
MIRT691749 IKBKG inhibitor of nuclear factor kappa B kinase subunit gamma 2 2
MIRT691833 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT691885 GXYLT2 glucoside xylosyltransferase 2 2 2
MIRT691947 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT692047 PAK1IP1 PAK1 interacting protein 1 2 2
MIRT692668 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT692767 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT692859 ZSWIM1 zinc finger SWIM-type containing 1 2 2
MIRT693122 SCNM1 sodium channel modifier 1 2 2
MIRT693514 MOB3A MOB kinase activator 3A 2 2
MIRT693648 ACBD7 acyl-CoA binding domain containing 7 2 2
MIRT693688 MXRA7 matrix remodeling associated 7 2 2
MIRT694078 RNASEH2B ribonuclease H2 subunit B 2 2
MIRT694163 SLC36A2 solute carrier family 36 member 2 2 2
MIRT694262 RGS9BP regulator of G protein signaling 9 binding protein 2 2
MIRT694506 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT694556 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT694639 MRI1 methylthioribose-1-phosphate isomerase 1 2 2
MIRT694710 CD300LG CD300 molecule like family member g 2 2
MIRT694753 LLGL1 LLGL1, scribble cell polarity complex component 2 2
MIRT694896 ZNF417 zinc finger protein 417 2 2
MIRT695158 BTD biotinidase 2 2
MIRT695275 CD209 CD209 molecule 2 2
MIRT695434 TCF23 transcription factor 23 2 2
MIRT695817 SRD5A1 steroid 5 alpha-reductase 1 2 2
MIRT696008 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT696345 SLC35D2 solute carrier family 35 member D2 2 2
MIRT696368 EIF2S3 eukaryotic translation initiation factor 2 subunit gamma 2 2
MIRT696533 C3 complement C3 2 2
MIRT696779 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT697075 PSMC4 proteasome 26S subunit, ATPase 4 2 2
MIRT697498 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT697630 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT697931 TXNDC16 thioredoxin domain containing 16 2 2
MIRT697966 TSPYL1 TSPY like 1 2 2
MIRT698237 TMEM216 transmembrane protein 216 2 2
MIRT698643 TES testin LIM domain protein 2 2
MIRT698661 TERF2 telomeric repeat binding factor 2 2 2
MIRT698974 SPAST spastin 2 2
MIRT699047 SOAT1 sterol O-acyltransferase 1 2 2
MIRT699193 SLX4IP SLX4 interacting protein 2 2
MIRT699586 SIKE1 suppressor of IKBKE 1 2 2
MIRT699759 SEPHS1 selenophosphate synthetase 1 2 2
MIRT700350 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT700402 RAB13 RAB13, member RAS oncogene family 2 2
MIRT700418 QDPR quinoid dihydropteridine reductase 2 2
MIRT700546 PTBP2 polypyrimidine tract binding protein 2 2 2
MIRT700774 PLA2G4A phospholipase A2 group IVA 2 2
MIRT700875 PER2 period circadian clock 2 2 2
MIRT700952 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT701077 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT701172 PACS2 phosphofurin acidic cluster sorting protein 2 2 2
MIRT701479 NEK9 NIMA related kinase 9 2 2
MIRT701661 MYH9 myosin heavy chain 9 2 2
MIRT701779 MSL2 MSL complex subunit 2 2 2
MIRT702137 MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 2 2
MIRT702494 KIAA1328 KIAA1328 2 2
MIRT703058 GTPBP10 GTP binding protein 10 2 2
MIRT703224 GOLGA3 golgin A3 2 2
MIRT703620 FBXO45 F-box protein 45 2 2
MIRT703657 FAM60A SIN3-HDAC complex associated factor 2 2
MIRT703765 FAM118A family with sequence similarity 118 member A 2 2
MIRT703832 EVI5 ecotropic viral integration site 5 2 2
MIRT703862 ERN1 endoplasmic reticulum to nucleus signaling 1 2 2
MIRT704664 CLCC1 chloride channel CLIC like 1 2 2
MIRT704812 CDC73 cell division cycle 73 2 2
MIRT705608 APAF1 apoptotic peptidase activating factor 1 2 2
MIRT705625 AP1S3 adaptor related protein complex 1 sigma 3 subunit 2 2
MIRT705682 ANKRD40 ankyrin repeat domain 40 2 2
MIRT705813 AKNA AT-hook transcription factor 2 2
MIRT706238 SYT15 synaptotagmin 15 2 2
MIRT706567 EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 2 2
MIRT709657 DFFB DNA fragmentation factor subunit beta 2 2
MIRT710609 ZNF555 zinc finger protein 555 2 2
MIRT711717 IREB2 iron responsive element binding protein 2 2 2
MIRT714122 TMED9 transmembrane p24 trafficking protein 9 2 2
MIRT715204 FKTN fukutin 2 2
MIRT718260 ZDHHC8 zinc finger DHHC-type containing 8 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4419b Fluorouracil 3385 NSC19893 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Cisplatin + Decitabine resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-mir-4419b Androstenedione+Anastrozole sensitive cell line (MCF-7)

Error report submission