pre-miRNA Information
pre-miRNA hsa-mir-1245a   
Genomic Coordinates chr2: 188978092 - 188978161
Description Homo sapiens miR-1245a stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-1245a
Sequence 45| AAGUGAUCUAAAGGCCUACAU |65
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN31562560 15 COSMIC
COSN26581044 19 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs906938680 2 dbSNP
rs1159117523 3 dbSNP
rs780486044 6 dbSNP
rs771479866 17 dbSNP
rs1002976932 18 dbSNP
rs1428029219 19 dbSNP
Putative Targets

Gene Information
Gene Symbol STK25   
Synonyms SOK1, YSK1
Description serine/threonine kinase 25
Transcript NM_006374   
Expression
Putative miRNA Targets on STK25
3'UTR of STK25
(miRNA target sites are highlighted)
>STK25|NM_006374|3'UTR
   1 AGCGCACTGCTGTTCAGATAGGGGACGGAAGGTCGTTTGTTTTTGTTCTGAGCTCCATAAGAACTGTGCTGACTTGGAAG
  81 GTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGTGGGCCTCACATGCCAGGTCACCAGGTCACCGTCTC
 161 CTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGCCCTCCTCCCTCTCCTGGCCC
 241 AGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGGTCTTCTGCAGACTCATGCAGC
 321 CCTATGGCCGCTCAGACCAAGGCGCAGAGCAACTATCAGGGCAGCTCTGCCTCCTCCTCCCATGAGGTGGGGAGAGGCAA
 401 CAGGGCAGCCCCCAGAGGAGTGTCCTGGCCGCTGTCCTCCCGGGGCCCATGATGGCCATAGATTTGCCTTGTGGTGTTGG
 481 ATCAGGTACTGTGTCTGCTCATAAGTACTTGTGTCATCCAGAATGTTTTGTTTTTTAAGAAAATTGAATTACTTGTTTCC
 561 TGAAATATTCTGAGGTTAATATGTTAGTTTTCATAGAACATTGAGAGGCCCCTGCCACTTTCAATAAAGACCTGACTTGG
 641 AGACATGCAGGTGTGTGTGGTGGGGCCCGGGCCATGCGGGGCTGCAGCGTCCCTGGTCCCGAGTCCTCATCACAGCACGC
 721 AGAGACGGCAGCCCAGCCCCCCTTCGAAACTTCCCTGTGACGGATTCCTGGGCTCTGCTTGGCCCACCGGAAGAACAGAG
 801 CAGGCAGAGGAGAATGCAGGTGGGGAGATGCTGTTTGTTTATTTTTAATCAAATGTGTGTGAACAAAGCAGTCGCCCATC
 881 TACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCACCCTCCCAGGGCACAGGGGGACTTTG
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' uaCAUCCGGA----A--AUCUAGUGaa 5'
            ||:|||||    |   ||:||||  
Target 5' ccGTGGGCCTCACATGCCAGGTCACca 3'
122 - 148 123.00 -17.20
2
miRNA  3' uaCAUCCGGAAAUCUAGUgaa 5'
            ||:|  : ||:|||||   
Target 5' ttGTGG--TGTTGGATCAggt 3'
469 - 487 115.00 -10.32
3
miRNA  3' uaCAUCCGGAA--AUCUAGUGAa 5'
            ||  |::||  |||| ||:| 
Target 5' atGTTAGTTTTCATAGAACATTg 3'
581 - 603 113.00 -7.60
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
722356 1564 ClinVar
785028 2238 ClinVar
COSN30522077 1 COSMIC
COSN31598084 4 COSMIC
COSN30543605 10 COSMIC
COSN30472999 21 COSMIC
COSN28672375 35 COSMIC
COSN30525413 50 COSMIC
COSN6682081 68 COSMIC
COSN30529949 79 COSMIC
COSN13984325 87 COSMIC
COSN30183130 101 COSMIC
COSN31568969 117 COSMIC
COSN30180330 121 COSMIC
COSN5790767 124 COSMIC
COSN31557448 146 COSMIC
COSN27327150 284 COSMIC
COSN22087579 312 COSMIC
COSN9997692 548 COSMIC
COSN30441084 872 COSMIC
COSN5130206 966 COSMIC
COSN28844782 1443 COSMIC
COSN30494126 1443 COSMIC
COSN28189743 1462 COSMIC
COSN30100787 1536 COSMIC
COSM8299703 1543 COSMIC
COSM2910667 1549 COSMIC
COSM9715525 1549 COSMIC
COSM8267264 1557 COSMIC
COSM1018971 1565 COSMIC
COSM6876826 1579 COSMIC
COSM7847040 1585 COSMIC
COSM1683335 1588 COSMIC
COSM5344159 1588 COSMIC
COSM9606801 1595 COSMIC
COSM1306615 1628 COSMIC
COSM3991209 1642 COSMIC
COSM6316271 1651 COSMIC
COSN26553335 1722 COSMIC
COSN26550073 1729 COSMIC
COSN16418248 1740 COSMIC
COSN5790765 1769 COSMIC
COSN6420153 2051 COSMIC
COSN24329079 2064 COSMIC
COSN1236646 2078 COSMIC
COSN30633107 2170 COSMIC
COSN21764021 2178 COSMIC
COSM7143540 2238 COSMIC
COSM1018970 2245 COSMIC
COSM1018969 2253 COSMIC
COSM7278171 2254 COSMIC
COSM1018968 2258 COSMIC
COSM5003847 2268 COSMIC
COSM2910663 2288 COSMIC
COSM7274101 2298 COSMIC
COSM8167031 2302 COSMIC
COSM7113051 2306 COSMIC
COSM1406960 2327 COSMIC
COSM9033196 2332 COSMIC
COSM4093093 2342 COSMIC
COSM7643102 2344 COSMIC
COSM4001615 2373 COSMIC
COSN4803461 2418 COSMIC
COSN20040657 2533 COSMIC
COSN6176568 2557 COSMIC
COSN6176567 2569 COSMIC
COSM6660600 2631 COSMIC
COSM9070897 2631 COSMIC
COSM4921398 2648 COSMIC
COSM5612829 2649 COSMIC
COSM5973702 2649 COSMIC
COSM9250234 2653 COSMIC
COSM5973701 2657 COSMIC
COSM7942061 2659 COSMIC
COSM381492 2664 COSMIC
COSM2910660 2668 COSMIC
COSM8650585 2716 COSMIC
COSM9753961 2723 COSMIC
COSM4093092 2729 COSMIC
COSM4093091 2732 COSMIC
COSM720840 2734 COSMIC
COSN28697911 2935 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs747139500 3 dbSNP
rs773541271 4 dbSNP
rs1052321512 6 dbSNP
rs371289620 12 dbSNP
rs779282182 15 dbSNP
rs755304245 17 dbSNP
rs1169756787 18 dbSNP
rs543277336 19 dbSNP
rs780597477 21 dbSNP
rs756738090 26 dbSNP
rs751109807 27 dbSNP
rs763625510 31 dbSNP
rs376096448 34 dbSNP
rs35393467 35 dbSNP
rs1274801975 38 dbSNP
rs1204314749 43 dbSNP
rs752303542 45 dbSNP
rs1021559526 52 dbSNP
rs1319795304 55 dbSNP
rs1010291557 57 dbSNP
rs926832638 66 dbSNP
rs1045328293 67 dbSNP
rs750009586 76 dbSNP
rs554483168 78 dbSNP
rs746371779 81 dbSNP
rs1435364475 86 dbSNP
rs1314431824 88 dbSNP
rs1321730808 93 dbSNP
rs545264081 97 dbSNP
rs918086539 98 dbSNP
rs1211152762 100 dbSNP
rs1243020260 103 dbSNP
rs11555266 104 dbSNP
rs578236917 106 dbSNP
rs951125709 113 dbSNP
rs1416302377 114 dbSNP
rs556650478 123 dbSNP
rs1048061896 124 dbSNP
rs571192603 137 dbSNP
rs973736156 137 dbSNP
rs757513259 138 dbSNP
rs960244420 150 dbSNP
rs1304207970 152 dbSNP
rs1379523503 154 dbSNP
rs1330649611 156 dbSNP
rs538352948 156 dbSNP
rs927416125 156 dbSNP
rs1230708367 161 dbSNP
rs1018173853 167 dbSNP
rs567633014 170 dbSNP
rs35602166 174 dbSNP
rs778038159 176 dbSNP
rs1486148844 181 dbSNP
rs1181754755 182 dbSNP
rs1249662177 186 dbSNP
rs534230060 190 dbSNP
rs1450301068 191 dbSNP
rs565824521 198 dbSNP
rs547714387 199 dbSNP
rs1424440674 200 dbSNP
rs1010172097 206 dbSNP
rs1178011816 210 dbSNP
rs1359551223 212 dbSNP
rs1425322473 212 dbSNP
rs35076778 213 dbSNP
rs1267983388 215 dbSNP
rs571117204 224 dbSNP
rs1030407159 225 dbSNP
rs1351740079 226 dbSNP
rs1010067607 235 dbSNP
rs1273637942 236 dbSNP
rs1228752113 250 dbSNP
rs892525533 251 dbSNP
rs142394358 255 dbSNP
rs1000896900 259 dbSNP
rs1231919190 265 dbSNP
rs905175932 266 dbSNP
rs9052 268 dbSNP
rs561065814 269 dbSNP
rs548686766 271 dbSNP
rs1047205426 272 dbSNP
rs12843 274 dbSNP
rs34902004 275 dbSNP
rs867165792 283 dbSNP
rs1056885277 285 dbSNP
rs942411980 289 dbSNP
rs188467970 291 dbSNP
rs1477740466 292 dbSNP
rs1372094790 293 dbSNP
rs938409171 304 dbSNP
rs910882129 308 dbSNP
rs1434889381 314 dbSNP
rs376089496 315 dbSNP
rs955250734 316 dbSNP
rs1020552480 317 dbSNP
rs1228199384 317 dbSNP
rs988630466 318 dbSNP
rs762618393 324 dbSNP
rs563094650 326 dbSNP
rs533523623 329 dbSNP
rs544691818 330 dbSNP
rs574164448 331 dbSNP
rs1032451433 343 dbSNP
rs34868504 344 dbSNP
rs905226804 346 dbSNP
rs1030707772 349 dbSNP
rs1475510615 352 dbSNP
rs569362213 355 dbSNP
rs867421215 357 dbSNP
rs1406615835 358 dbSNP
rs1345195549 359 dbSNP
rs1395933852 360 dbSNP
rs965127948 360 dbSNP
rs1018135568 364 dbSNP
rs1013865080 365 dbSNP
rs1367838845 371 dbSNP
rs896706493 372 dbSNP
rs888398821 379 dbSNP
rs769530113 395 dbSNP
rs1047750275 398 dbSNP
rs930185848 400 dbSNP
rs1349210872 407 dbSNP
rs994046737 409 dbSNP
rs573191202 411 dbSNP
rs1249620853 412 dbSNP
rs1447367584 415 dbSNP
rs1352638553 416 dbSNP
rs1332517254 420 dbSNP
rs879698356 421 dbSNP
rs1038120200 423 dbSNP
rs1414112644 425 dbSNP
rs942421742 430 dbSNP
rs910888799 431 dbSNP
rs147750538 435 dbSNP
rs1252687448 439 dbSNP
rs551198563 441 dbSNP
rs933913347 442 dbSNP
rs776333102 444 dbSNP
rs1387528251 446 dbSNP
rs905592805 449 dbSNP
rs1044580224 453 dbSNP
rs374170945 455 dbSNP
rs1416676350 458 dbSNP
rs1293934379 459 dbSNP
rs768089815 466 dbSNP
rs947548166 473 dbSNP
rs181330485 474 dbSNP
rs7618 475 dbSNP
rs989023107 485 dbSNP
rs934884017 491 dbSNP
rs189882106 493 dbSNP
rs1188241560 498 dbSNP
rs1443833329 498 dbSNP
rs957267211 501 dbSNP
rs1033251240 505 dbSNP
rs1250346292 517 dbSNP
rs368156642 522 dbSNP
rs1471333668 542 dbSNP
rs879831216 544 dbSNP
rs1366130492 546 dbSNP
rs1172411172 555 dbSNP
rs1454602434 555 dbSNP
rs1186459842 566 dbSNP
rs1442609839 568 dbSNP
rs1436777270 574 dbSNP
rs1313719199 578 dbSNP
rs1349885008 579 dbSNP
rs1408141146 581 dbSNP
rs1309052347 586 dbSNP
rs1336314842 590 dbSNP
rs567240244 593 dbSNP
rs969439095 596 dbSNP
rs1253971976 603 dbSNP
rs1023655171 608 dbSNP
rs964848097 609 dbSNP
rs1018098379 611 dbSNP
rs1327798014 613 dbSNP
rs377586775 621 dbSNP
rs984839690 631 dbSNP
rs1325748261 637 dbSNP
rs1183770090 638 dbSNP
rs1253261173 646 dbSNP
rs952528167 647 dbSNP
rs1026796325 654 dbSNP
rs1198818060 667 dbSNP
rs960973422 668 dbSNP
rs1455865603 669 dbSNP
rs546951972 669 dbSNP
rs1035387426 671 dbSNP
rs549110616 675 dbSNP
rs1300017916 677 dbSNP
rs1397329500 678 dbSNP
rs994822440 682 dbSNP
rs776754531 686 dbSNP
rs905644098 688 dbSNP
rs1044130597 689 dbSNP
rs540220789 692 dbSNP
rs1336351963 696 dbSNP
rs554850407 700 dbSNP
rs1038464433 701 dbSNP
rs1296377751 713 dbSNP
rs1006611358 718 dbSNP
rs889502485 719 dbSNP
rs1050786197 720 dbSNP
rs1387916623 721 dbSNP
rs933694917 726 dbSNP
rs1159907094 727 dbSNP
rs947097126 729 dbSNP
rs771437811 737 dbSNP
rs1265948611 738 dbSNP
rs912886584 740 dbSNP
rs35382054 741 dbSNP
rs935880995 743 dbSNP
rs925795310 745 dbSNP
rs1162465363 746 dbSNP
rs1472974994 754 dbSNP
rs35496488 761 dbSNP
rs1186204259 762 dbSNP
rs1291714125 765 dbSNP
rs185302165 772 dbSNP
rs969865615 775 dbSNP
rs1319592991 777 dbSNP
rs916691182 784 dbSNP
rs992651381 788 dbSNP
rs747115971 805 dbSNP
rs1320575152 809 dbSNP
rs1026033387 812 dbSNP
rs1242061522 817 dbSNP
rs193024011 820 dbSNP
rs963262639 824 dbSNP
rs1017069654 825 dbSNP
rs563205393 826 dbSNP
rs1247752597 828 dbSNP
rs1463825428 829 dbSNP
rs952082115 841 dbSNP
rs1026850959 848 dbSNP
rs1423286911 852 dbSNP
rs34119495 854 dbSNP
rs1420148499 858 dbSNP
rs1357427357 878 dbSNP
rs1158346624 880 dbSNP
rs1007039646 888 dbSNP
rs889931660 889 dbSNP
rs1289080044 904 dbSNP
rs1050839648 909 dbSNP
rs374916293 922 dbSNP
rs905527201 923 dbSNP
rs1321264864 931 dbSNP
rs998334347 943 dbSNP
rs1011292789 946 dbSNP
rs1268064664 948 dbSNP
rs1315504103 949 dbSNP
rs892873331 962 dbSNP
rs544808213 964 dbSNP
rs574219376 978 dbSNP
rs1483020644 979 dbSNP
rs1053239034 982 dbSNP
rs1259629380 990 dbSNP
rs778183406 991 dbSNP
rs1181349955 995 dbSNP
rs139465148 1002 dbSNP
rs756610008 1005 dbSNP
rs36092683 1007 dbSNP
rs1454352759 1009 dbSNP
rs1358382365 1010 dbSNP
rs1464194746 1010 dbSNP
rs1314334244 1026 dbSNP
rs1355474953 1027 dbSNP
rs1408763036 1028 dbSNP
rs1288238176 1029 dbSNP
rs1371870240 1034 dbSNP
rs1225999449 1040 dbSNP
rs1285347693 1048 dbSNP
rs1311982223 1048 dbSNP
rs190607867 1049 dbSNP
rs1282811031 1050 dbSNP
rs1486035946 1051 dbSNP
rs910570504 1052 dbSNP
rs1448475436 1056 dbSNP
rs1049079348 1059 dbSNP
rs1471090069 1060 dbSNP
rs935946728 1081 dbSNP
rs34063848 1087 dbSNP
rs1044319768 1088 dbSNP
rs1245501126 1089 dbSNP
rs948574905 1090 dbSNP
rs1175111169 1102 dbSNP
rs919341100 1110 dbSNP
rs1305589603 1116 dbSNP
rs115546683 1118 dbSNP
rs1452618019 1122 dbSNP
rs35804074 1124 dbSNP
rs928447499 1125 dbSNP
rs961037736 1126 dbSNP
rs918615683 1127 dbSNP
rs1325055011 1128 dbSNP
rs981782731 1133 dbSNP
rs973113304 1140 dbSNP
rs962670318 1141 dbSNP
rs1017162573 1163 dbSNP
rs577498617 1170 dbSNP
rs985673054 1171 dbSNP
rs954244503 1175 dbSNP
rs751695103 1181 dbSNP
rs1029750950 1185 dbSNP
rs556079066 1194 dbSNP
rs1205060324 1202 dbSNP
rs972711076 1204 dbSNP
rs997947513 1211 dbSNP
rs1466948212 1214 dbSNP
rs891511583 1218 dbSNP
rs1395482708 1220 dbSNP
rs1448461769 1221 dbSNP
rs374084665 1222 dbSNP
rs1428826733 1223 dbSNP
rs537647956 1228 dbSNP
rs545982528 1229 dbSNP
rs758337866 1250 dbSNP
rs1040519372 1255 dbSNP
rs750386279 1263 dbSNP
rs1191183403 1269 dbSNP
rs889354944 1270 dbSNP
rs1049132265 1276 dbSNP
rs1268651566 1280 dbSNP
rs948586382 1284 dbSNP
rs567458919 1291 dbSNP
rs919223104 1292 dbSNP
rs765077311 1294 dbSNP
rs555129635 1297 dbSNP
rs533905178 1298 dbSNP
rs1253324633 1299 dbSNP
rs939425972 1300 dbSNP
rs1190564629 1302 dbSNP
rs1057346166 1303 dbSNP
rs559516942 1306 dbSNP
rs575354554 1307 dbSNP
rs981284543 1311 dbSNP
rs1460297058 1320 dbSNP
rs1167738401 1324 dbSNP
rs939462165 1330 dbSNP
rs1382072238 1334 dbSNP
rs918694013 1336 dbSNP
rs1328473591 1341 dbSNP
rs1431781368 1347 dbSNP
rs566318860 1348 dbSNP
rs972822930 1350 dbSNP
rs1275624787 1356 dbSNP
rs1206881517 1359 dbSNP
rs941402706 1362 dbSNP
rs1277969714 1364 dbSNP
rs1219777382 1370 dbSNP
rs1203208191 1372 dbSNP
rs1285885191 1376 dbSNP
rs909877758 1377 dbSNP
rs776210488 1382 dbSNP
rs957038631 1398 dbSNP
rs954255941 1403 dbSNP
rs1190677490 1405 dbSNP
rs1419290730 1419 dbSNP
rs1453458193 1426 dbSNP
rs1347360463 1447 dbSNP
rs1029849575 1448 dbSNP
rs1031313035 1450 dbSNP
rs1373700162 1451 dbSNP
rs999024729 1459 dbSNP
rs1293802596 1460 dbSNP
rs1349852849 1462 dbSNP
rs1350815945 1467 dbSNP
rs1281029466 1474 dbSNP
rs73008118 1479 dbSNP
rs184878405 1481 dbSNP
rs1019556729 1485 dbSNP
rs956214959 1490 dbSNP
rs865953320 1494 dbSNP
rs759312568 1495 dbSNP
rs776692602 1498 dbSNP
rs766464712 1499 dbSNP
rs1007731465 1500 dbSNP
rs1180292685 1515 dbSNP
rs191204815 1515 dbSNP
rs773379873 1516 dbSNP
rs772060933 1517 dbSNP
rs748337739 1518 dbSNP
rs774505507 1521 dbSNP
rs1436640303 1526 dbSNP
rs375470303 1529 dbSNP
rs769053492 1530 dbSNP
rs749703772 1531 dbSNP
rs780507764 1536 dbSNP
rs1470983149 1537 dbSNP
rs145352184 1543 dbSNP
rs746396220 1549 dbSNP
rs777278068 1550 dbSNP
rs780479046 1552 dbSNP
rs767147986 1555 dbSNP
rs1233377499 1559 dbSNP
rs377499533 1561 dbSNP
rs1349660265 1562 dbSNP
rs144436834 1564 dbSNP
rs1225284918 1567 dbSNP
rs1273201765 1570 dbSNP
rs754776634 1571 dbSNP
rs753721991 1574 dbSNP
rs766303472 1578 dbSNP
rs867531141 1580 dbSNP
rs760636177 1583 dbSNP
rs141494626 1584 dbSNP
rs750393481 1587 dbSNP
rs767632632 1588 dbSNP
rs754634487 1589 dbSNP
rs1332566759 1591 dbSNP
rs1194572416 1592 dbSNP
rs775042492 1596 dbSNP
rs1046015046 1597 dbSNP
rs774611397 1599 dbSNP
rs768802413 1600 dbSNP
rs1221205815 1604 dbSNP
rs763194660 1605 dbSNP
rs775782542 1607 dbSNP
rs929152368 1608 dbSNP
rs1182342718 1612 dbSNP
rs747234451 1614 dbSNP
rs144567345 1615 dbSNP
rs751051050 1617 dbSNP
rs771539439 1617 dbSNP
rs770157076 1618 dbSNP
rs746304532 1623 dbSNP
rs897653332 1629 dbSNP
rs1037555508 1630 dbSNP
rs1208409868 1632 dbSNP
rs1174496580 1634 dbSNP
rs781613392 1635 dbSNP
rs771595208 1636 dbSNP
rs1460579192 1638 dbSNP
rs747657689 1646 dbSNP
rs1379023224 1648 dbSNP
rs144832701 1649 dbSNP
rs753561627 1654 dbSNP
rs1409230967 1655 dbSNP
rs779931208 1656 dbSNP
rs754637602 1659 dbSNP
rs756042809 1661 dbSNP
rs750363125 1666 dbSNP
rs372810266 1667 dbSNP
rs369845140 1668 dbSNP
rs751554092 1672 dbSNP
rs1294479290 1675 dbSNP
rs766054975 1677 dbSNP
rs909889146 1679 dbSNP
rs764256642 1681 dbSNP
rs753493072 1686 dbSNP
rs763102943 1689 dbSNP
rs775692453 1694 dbSNP
rs199932739 1697 dbSNP
rs1463683455 1698 dbSNP
rs759948740 1699 dbSNP
rs932642189 1701 dbSNP
rs1213649348 1705 dbSNP
rs966227793 1709 dbSNP
rs922867847 1714 dbSNP
rs1194487830 1718 dbSNP
rs562321735 1721 dbSNP
rs2018761 1729 dbSNP
rs528563989 1732 dbSNP
rs755517051 1761 dbSNP
rs1303005969 1762 dbSNP
rs1460797276 1763 dbSNP
rs978511365 1769 dbSNP
rs1396393801 1770 dbSNP
rs1461828285 1773 dbSNP
rs748543254 1774 dbSNP
rs781527968 1775 dbSNP
rs1359495200 1776 dbSNP
rs564274819 1777 dbSNP
rs755222827 1781 dbSNP
rs545784498 1785 dbSNP
rs747249012 1790 dbSNP
rs1012614643 1809 dbSNP
rs1027799424 1821 dbSNP
rs959713113 1824 dbSNP
rs1271888998 1837 dbSNP
rs575283026 1845 dbSNP
rs1161770982 1846 dbSNP
rs995098791 1847 dbSNP
rs1036054319 1850 dbSNP
rs993418553 1857 dbSNP
rs1262447713 1858 dbSNP
rs1474955640 1859 dbSNP
rs897660211 1871 dbSNP
rs1185706982 1874 dbSNP
rs780172103 1879 dbSNP
rs1419990301 1881 dbSNP
rs1475401985 1886 dbSNP
rs1158047543 1893 dbSNP
rs555993692 1893 dbSNP
rs1015361757 1901 dbSNP
rs1182601603 1908 dbSNP
rs544505361 1909 dbSNP
rs1246251219 1910 dbSNP
rs749970047 1911 dbSNP
rs1465268623 1912 dbSNP
rs756033633 1913 dbSNP
rs888502221 1916 dbSNP
rs368578935 1917 dbSNP
rs1306686561 1920 dbSNP
rs948115700 1920 dbSNP
rs573722102 1925 dbSNP
rs1218194757 1927 dbSNP
rs1485369023 1932 dbSNP
rs1208887538 1933 dbSNP
rs555560820 1936 dbSNP
rs1473065091 1937 dbSNP
rs894326720 1940 dbSNP
rs922622453 1943 dbSNP
rs1041702819 1944 dbSNP
rs750308172 1951 dbSNP
rs1159370307 1963 dbSNP
rs1420710976 1963 dbSNP
rs934891538 1964 dbSNP
rs1432301447 1965 dbSNP
rs1314126138 1966 dbSNP
rs935945315 1969 dbSNP
rs1449312511 1971 dbSNP
rs1298164820 1972 dbSNP
rs1371626226 1974 dbSNP
rs924551014 1978 dbSNP
rs1310239859 1980 dbSNP
rs1362459254 1987 dbSNP
rs977527855 1988 dbSNP
rs924793716 1990 dbSNP
rs1232414604 1991 dbSNP
rs1282486265 1993 dbSNP
rs1443085111 2004 dbSNP
rs978898930 2005 dbSNP
rs533776968 2007 dbSNP
rs1319260871 2011 dbSNP
rs1481473048 2014 dbSNP
rs1435138412 2015 dbSNP
rs968863696 2018 dbSNP
rs1452140509 2020 dbSNP
rs944398196 2021 dbSNP
rs915684928 2023 dbSNP
rs911510586 2025 dbSNP
rs566549642 2030 dbSNP
rs1408931369 2035 dbSNP
rs985894076 2041 dbSNP
rs1353321664 2042 dbSNP
rs1332418688 2047 dbSNP
rs1370727392 2048 dbSNP
rs76958328 2049 dbSNP
rs1291088626 2050 dbSNP
rs1305966346 2051 dbSNP
rs76949014 2051 dbSNP
rs953077300 2053 dbSNP
rs1214098694 2058 dbSNP
rs1027855138 2059 dbSNP
rs1368251859 2061 dbSNP
rs962647967 2062 dbSNP
rs973550615 2062 dbSNP
rs1252072101 2063 dbSNP
rs11320829 2065 dbSNP
rs1174828434 2065 dbSNP
rs1466979468 2065 dbSNP
rs200604715 2065 dbSNP
rs879187655 2065 dbSNP
rs1446646168 2066 dbSNP
rs1388445355 2068 dbSNP
rs1328131256 2069 dbSNP
rs1460265006 2069 dbSNP
rs991231770 2069 dbSNP
rs1430304249 2070 dbSNP
rs1268450548 2072 dbSNP
rs1188041942 2078 dbSNP
rs1465356156 2079 dbSNP
rs557928709 2080 dbSNP
rs1263766121 2084 dbSNP
rs1004169846 2085 dbSNP
rs970771459 2087 dbSNP
rs765174581 2093 dbSNP
rs1215388101 2102 dbSNP
rs1023562349 2103 dbSNP
rs960007436 2124 dbSNP
rs1035327076 2128 dbSNP
rs756999349 2131 dbSNP
rs1488068299 2133 dbSNP
rs1477897779 2140 dbSNP
rs961964317 2141 dbSNP
rs1417820789 2146 dbSNP
rs1054254841 2148 dbSNP
rs1165312724 2150 dbSNP
rs1391939786 2155 dbSNP
rs1224298888 2158 dbSNP
rs1016063308 2160 dbSNP
rs777171524 2168 dbSNP
rs771378133 2169 dbSNP
rs747579054 2170 dbSNP
rs753597469 2171 dbSNP
rs1366337009 2173 dbSNP
rs763924092 2174 dbSNP
rs375374995 2177 dbSNP
rs779913006 2178 dbSNP
rs763591445 2181 dbSNP
rs745692051 2182 dbSNP
rs1347669395 2184 dbSNP
rs781073216 2186 dbSNP
rs369306453 2187 dbSNP
rs370443658 2196 dbSNP
rs1430377986 2198 dbSNP
rs1254802415 2203 dbSNP
rs751529134 2205 dbSNP
rs996907027 2209 dbSNP
rs186765872 2211 dbSNP
rs1269657415 2217 dbSNP
rs1192066303 2219 dbSNP
rs1343688191 2220 dbSNP
rs1488183001 2226 dbSNP
rs758539172 2234 dbSNP
rs1369353792 2235 dbSNP
rs137904208 2238 dbSNP
rs759858746 2240 dbSNP
rs776818417 2241 dbSNP
rs766784079 2242 dbSNP
rs1420565195 2243 dbSNP
rs773838546 2245 dbSNP
rs182405145 2246 dbSNP
rs748858207 2249 dbSNP
rs775254074 2250 dbSNP
rs1334948142 2254 dbSNP
rs201251233 2254 dbSNP
rs780792477 2255 dbSNP
rs140222530 2258 dbSNP
rs143353723 2259 dbSNP
rs777744170 2260 dbSNP
rs372902205 2266 dbSNP
rs758447251 2273 dbSNP
rs752811488 2274 dbSNP
rs765327815 2276 dbSNP
rs568686848 2277 dbSNP
rs1349435534 2279 dbSNP
rs754098632 2280 dbSNP
rs547156040 2281 dbSNP
rs761161320 2286 dbSNP
rs773835676 2287 dbSNP
rs1180047266 2288 dbSNP
rs763540978 2289 dbSNP
rs773796840 2289 dbSNP
rs765848044 2291 dbSNP
rs149705193 2296 dbSNP
rs762443520 2297 dbSNP
rs1484429834 2298 dbSNP
rs1256995866 2300 dbSNP
rs147747781 2302 dbSNP
rs769442983 2304 dbSNP
rs1012198713 2306 dbSNP
rs759043812 2307 dbSNP
rs1016174476 2308 dbSNP
rs958148449 2309 dbSNP
rs1349416308 2312 dbSNP
rs1306097069 2323 dbSNP
rs1459063592 2324 dbSNP
rs776411434 2325 dbSNP
rs145708249 2327 dbSNP
rs746868180 2328 dbSNP
rs777654148 2329 dbSNP
rs368809020 2330 dbSNP
rs1161733871 2332 dbSNP
rs997359952 2335 dbSNP
rs901230714 2336 dbSNP
rs748102958 2339 dbSNP
rs149768246 2343 dbSNP
rs553320289 2344 dbSNP
rs1200181355 2346 dbSNP
rs753995061 2350 dbSNP
rs1194592128 2352 dbSNP
rs1269627783 2353 dbSNP
rs756404739 2355 dbSNP
rs150633197 2356 dbSNP
rs762201085 2356 dbSNP
rs1458535880 2360 dbSNP
rs375716573 2364 dbSNP
rs1277221621 2368 dbSNP
rs2271030 2373 dbSNP
rs1340927433 2383 dbSNP
rs890361811 2388 dbSNP
rs764649553 2391 dbSNP
rs759141744 2392 dbSNP
rs1050128052 2393 dbSNP
rs776124634 2400 dbSNP
rs770654848 2402 dbSNP
rs1400744154 2403 dbSNP
rs370217303 2406 dbSNP
rs1323440831 2407 dbSNP
rs772939032 2408 dbSNP
rs1055943143 2409 dbSNP
rs771864132 2413 dbSNP
rs1187549096 2417 dbSNP
rs1471543490 2419 dbSNP
rs1307721671 2421 dbSNP
rs938443399 2425 dbSNP
rs928432918 2428 dbSNP
rs972222015 2440 dbSNP
rs563358661 2448 dbSNP
rs1037458828 2449 dbSNP
rs34292139 2451 dbSNP
rs527310367 2456 dbSNP
rs908063259 2457 dbSNP
rs1280719257 2459 dbSNP
rs1318995588 2460 dbSNP
rs1213517243 2467 dbSNP
rs1264079333 2468 dbSNP
rs573860469 2470 dbSNP
rs1398775404 2471 dbSNP
rs953274440 2473 dbSNP
rs1261062594 2479 dbSNP
rs1426875909 2484 dbSNP
rs1195748204 2485 dbSNP
rs555412806 2487 dbSNP
rs1028797927 2489 dbSNP
rs1474852613 2491 dbSNP
rs949700179 2494 dbSNP
rs1351408655 2501 dbSNP
rs954377435 2509 dbSNP
rs1287980694 2511 dbSNP
rs1170922192 2531 dbSNP
rs1459344740 2532 dbSNP
rs966254943 2534 dbSNP
rs916821837 2545 dbSNP
rs578107284 2547 dbSNP
rs1019733122 2549 dbSNP
rs958032292 2563 dbSNP
rs1310947134 2564 dbSNP
rs999335521 2569 dbSNP
rs1260431381 2571 dbSNP
rs778883751 2577 dbSNP
rs1218950919 2581 dbSNP
rs768598452 2581 dbSNP
rs777742118 2581 dbSNP
rs749428648 2583 dbSNP
rs780030293 2584 dbSNP
rs1464121821 2585 dbSNP
rs776884699 2586 dbSNP
rs756312410 2588 dbSNP
rs750687713 2589 dbSNP
rs1264779592 2593 dbSNP
rs78424517 2595 dbSNP
rs1415676811 2599 dbSNP
rs1424243857 2600 dbSNP
rs967186681 2601 dbSNP
rs1243747270 2603 dbSNP
rs781636293 2604 dbSNP
rs1298013146 2607 dbSNP
rs757762474 2608 dbSNP
rs752098658 2609 dbSNP
rs1316505533 2616 dbSNP
rs1193429714 2617 dbSNP
rs139507659 2619 dbSNP
rs1374329319 2625 dbSNP
rs758937524 2627 dbSNP
rs753346242 2628 dbSNP
rs768904077 2629 dbSNP
rs760259191 2630 dbSNP
rs772918875 2632 dbSNP
rs747259324 2633 dbSNP
rs1449259068 2635 dbSNP
rs1009145780 2637 dbSNP
rs1306532947 2638 dbSNP
rs573076039 2638 dbSNP
rs761647258 2639 dbSNP
rs1302703097 2641 dbSNP
rs774128174 2643 dbSNP
rs749207353 2644 dbSNP
rs1344174430 2646 dbSNP
rs772078527 2647 dbSNP
rs775531082 2647 dbSNP
rs938885805 2647 dbSNP
rs1275267882 2652 dbSNP
rs1483439821 2653 dbSNP
rs745948966 2653 dbSNP
rs777647910 2655 dbSNP
rs775582552 2656 dbSNP
rs756027873 2657 dbSNP
rs769768522 2657 dbSNP
rs747951368 2658 dbSNP
rs746083428 2659 dbSNP
rs780886972 2659 dbSNP
rs139895598 2660 dbSNP
rs1302587352 2665 dbSNP
rs754656081 2666 dbSNP
rs770459028 2667 dbSNP
rs372550589 2668 dbSNP
rs539553205 2669 dbSNP
rs753153835 2670 dbSNP
rs765844476 2672 dbSNP
rs755683110 2676 dbSNP
rs750059266 2683 dbSNP
rs575283599 2687 dbSNP
rs1352087147 2688 dbSNP
rs761487708 2689 dbSNP
rs1375163255 2690 dbSNP
rs1163322036 2693 dbSNP
rs751315746 2696 dbSNP
rs774148238 2698 dbSNP
rs1435831213 2699 dbSNP
rs1280526890 2701 dbSNP
rs763811029 2707 dbSNP
rs762882207 2708 dbSNP
rs775358113 2710 dbSNP
rs1282903073 2711 dbSNP
rs1370294838 2711 dbSNP
rs908902255 2715 dbSNP
rs769980116 2716 dbSNP
rs745993703 2718 dbSNP
rs142709226 2719 dbSNP
rs747214629 2720 dbSNP
rs1458972060 2727 dbSNP
rs1178863464 2736 dbSNP
rs766143005 2740 dbSNP
rs556893470 2746 dbSNP
rs1415406719 2749 dbSNP
rs757919657 2752 dbSNP
rs758691127 2752 dbSNP
rs748678881 2753 dbSNP
rs1476743667 2754 dbSNP
rs1192378870 2757 dbSNP
rs1425266226 2759 dbSNP
rs779340478 2761 dbSNP
rs921897250 2765 dbSNP
rs1473282997 2768 dbSNP
rs1412114764 2774 dbSNP
rs1181331236 2777 dbSNP
rs755595137 2780 dbSNP
rs1168754264 2783 dbSNP
rs1398549580 2783 dbSNP
rs535137758 2783 dbSNP
rs568726766 2784 dbSNP
rs965938071 2789 dbSNP
rs1332268563 2794 dbSNP
rs1393953303 2799 dbSNP
rs368263765 2801 dbSNP
rs1276625923 2802 dbSNP
rs1471012586 2803 dbSNP
rs547025119 2808 dbSNP
rs925318698 2810 dbSNP
rs1319701683 2813 dbSNP
rs1199093457 2814 dbSNP
rs978481568 2816 dbSNP
rs1436167636 2822 dbSNP
rs535173986 2824 dbSNP
rs1461423312 2830 dbSNP
rs1223331877 2831 dbSNP
rs977533917 2832 dbSNP
rs1474832445 2834 dbSNP
rs1020111703 2845 dbSNP
rs1244421891 2846 dbSNP
rs986870170 2852 dbSNP
rs1463957039 2855 dbSNP
rs1413527857 2860 dbSNP
rs538386464 2866 dbSNP
rs1284119519 2871 dbSNP
rs570721538 2873 dbSNP
rs1224696113 2876 dbSNP
rs954530402 2877 dbSNP
rs967430008 2879 dbSNP
rs1353201110 2881 dbSNP
rs1021646661 2883 dbSNP
rs1296247417 2887 dbSNP
rs1342241138 2894 dbSNP
rs752244957 2894 dbSNP
rs552220721 2896 dbSNP
rs1292384434 2898 dbSNP
rs1354065950 2906 dbSNP
rs1011612499 2907 dbSNP
rs530935653 2921 dbSNP
rs899063397 2924 dbSNP
rs563471642 2934 dbSNP
rs4075818 2935 dbSNP
rs1489517142 2940 dbSNP
rs777118054 2946 dbSNP
rs1368245103 2947 dbSNP
rs769203930 2947 dbSNP
rs1472054183 2948 dbSNP
rs747250814 2954 dbSNP
rs530083537 2955 dbSNP
rs561968911 2961 dbSNP
rs754646427 2961 dbSNP
rs1362544820 2962 dbSNP
rs150527182 2966 dbSNP
rs895329188 2969 dbSNP
rs780143830 2976 dbSNP
rs1450012784 2983 dbSNP
rs1048781600 2986 dbSNP
rs931690949 2990 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084076. RNA binding protein: AGO2. Condition:CLIP_nohippuristanol_rep1_SigmaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' uacauccggaaAUCUAGUGAa 5'
                     |:||||||| 
Target 5' --------agaUGGAUCACUu 3'
1 - 13
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084076
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_nohippuristanol_rep1_SigmaAb
Location of target site ENST00000316586.4 | 3UTR | AGAUGGAUCACUUGAGGUCAGGAGUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
HNSC -0.592 0.08 -0.500 0.13 7 Click to see details
BRCA -0.418 0.36 0.500 0.33 3 Click to see details
UCEC 0.053 0.48 0.500 0.33 3 Click to see details
BLCA 0.024 0.49 -0.500 0.33 3 Click to see details
BLCA 0.024 0.49 -0.500 0.33 3 Click to see details
BLCA 0.024 0.49 -0.500 0.33 3 Click to see details
BLCA 0.024 0.49 -0.500 0.33 3 Click to see details
BLCA 0.024 0.49 -0.500 0.33 3 Click to see details
109 hsa-miR-1245a Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT006574 BRCA2 BRCA2, DNA repair associated 2 1
MIRT055432 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 2
MIRT063879 RASSF8 Ras association domain family member 8 2 6
MIRT077025 WIPF2 WAS/WASL interacting protein family member 2 2 2
MIRT095775 GRPEL2 GrpE like 2, mitochondrial 2 10
MIRT099172 MAP3K4 mitogen-activated protein kinase kinase kinase 4 2 2
MIRT175616 OCRL OCRL, inositol polyphosphate-5-phosphatase 2 2
MIRT456518 LYPLAL1 lysophospholipase like 1 2 2
MIRT464457 UGCG UDP-glucose ceramide glucosyltransferase 2 2
MIRT465747 TMPPE transmembrane protein with metallophosphoesterase domain 2 2
MIRT468257 SFXN4 sideroflexin 4 2 2
MIRT469216 RICTOR RPTOR independent companion of MTOR complex 2 2 2
MIRT472045 NPAT nuclear protein, coactivator of histone transcription 2 2
MIRT481795 APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 2 2
MIRT500154 CREBBP CREB binding protein 2 2
MIRT506514 MSANTD4 Myb/SANT DNA binding domain containing 4 with coiled-coils 2 4
MIRT506915 KBTBD8 kelch repeat and BTB domain containing 8 2 6
MIRT513901 GRB10 growth factor receptor bound protein 10 2 6
MIRT519128 ALDH2 aldehyde dehydrogenase 2 family (mitochondrial) 2 2
MIRT528121 FOXH1 forkhead box H1 2 2
MIRT528942 SFMBT2 Scm like with four mbt domains 2 2 2
MIRT540580 CEP89 centrosomal protein 89 2 2
MIRT545858 ZNF264 zinc finger protein 264 2 4
MIRT547147 PGM3 phosphoglucomutase 3 2 2
MIRT547434 MED4 mediator complex subunit 4 2 2
MIRT554650 ROBO1 roundabout guidance receptor 1 2 2
MIRT558524 CSRNP3 cysteine and serine rich nuclear protein 3 2 2
MIRT559762 ABHD5 abhydrolase domain containing 5 2 2
MIRT560438 GOLGA7B golgin A7 family member B 2 2
MIRT561974 LRRC59 leucine rich repeat containing 59 2 2
MIRT562442 DDIT4 DNA damage inducible transcript 4 2 2
MIRT563489 ZWINT ZW10 interacting kinetochore protein 2 2
MIRT568265 BMP2K BMP2 inducible kinase 2 2
MIRT572522 KIAA0232 KIAA0232 2 2
MIRT612801 LSM14A LSM14A, mRNA processing body assembly factor 2 2
MIRT621533 ZNF507 zinc finger protein 507 2 2
MIRT625205 GSTCD glutathione S-transferase C-terminal domain containing 2 2
MIRT625615 ZNF84 zinc finger protein 84 2 2
MIRT629215 C12orf66 chromosome 12 open reading frame 66 2 2
MIRT629509 AS3MT arsenite methyltransferase 2 2
MIRT629769 STK25 serine/threonine kinase 25 2 2
MIRT630908 GATAD1 GATA zinc finger domain containing 1 2 2
MIRT632508 RAB13 RAB13, member RAS oncogene family 2 2
MIRT636871 ARSE arylsulfatase E (chondrodysplasia punctata 1) 2 2
MIRT637106 CXorf23 BCLAF1 and THRAP3 family member 3 2 2
MIRT637332 FAM9B family with sequence similarity 9 member B 2 2
MIRT637553 CHST6 carbohydrate sulfotransferase 6 2 2
MIRT637639 ZNF431 zinc finger protein 431 2 2
MIRT637836 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT638326 RNF11 ring finger protein 11 2 2
MIRT638393 RAB11FIP1 RAB11 family interacting protein 1 2 2
MIRT642450 CLUAP1 clusterin associated protein 1 2 2
MIRT642616 APOPT1 apoptogenic 1, mitochondrial 2 2
MIRT643133 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT644324 NFKBID NFKB inhibitor delta 2 2
MIRT645150 DIS3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease 2 2
MIRT645673 ADK adenosine kinase 2 2
MIRT646091 MGST3 microsomal glutathione S-transferase 3 2 2
MIRT646858 SLC35E4 solute carrier family 35 member E4 2 2
MIRT650153 ZNF426 zinc finger protein 426 2 2
MIRT652483 TMEM181 transmembrane protein 181 2 2
MIRT653790 SIRPA signal regulatory protein alpha 2 2
MIRT655526 PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 2 2
MIRT657077 JPH2 junctophilin 2 2 2
MIRT657322 HOOK3 hook microtubule tethering protein 3 2 2
MIRT662036 FUT2 fucosyltransferase 2 2 2
MIRT662322 ADM2 adrenomedullin 2 2 2
MIRT663211 DARS2 aspartyl-tRNA synthetase 2, mitochondrial 2 2
MIRT663559 CCR6 C-C motif chemokine receptor 6 2 2
MIRT663937 ZNF554 zinc finger protein 554 2 2
MIRT664689 EIF2B2 eukaryotic translation initiation factor 2B subunit beta 2 2
MIRT664709 PAICS phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase 2 2
MIRT665291 ZFP14 ZFP14 zinc finger protein 2 2
MIRT665572 TXNL1 thioredoxin like 1 2 2
MIRT667068 PAOX polyamine oxidase 2 2
MIRT667304 MYO5A myosin VA 2 2
MIRT667442 METTL14 methyltransferase like 14 2 2
MIRT668048 GTPBP10 GTP binding protein 10 2 2
MIRT669604 AGO3 argonaute 3, RISC catalytic component 2 2
MIRT671088 ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 2 2
MIRT674361 SLC35E3 solute carrier family 35 member E3 2 2
MIRT674962 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT676394 SEC24D SEC24 homolog D, COPII coat complex component 2 2
MIRT676819 AGMAT agmatinase 2 2
MIRT676891 ENSA endosulfine alpha 2 2
MIRT677059 ZNF34 zinc finger protein 34 2 2
MIRT678424 ANKRD36 ankyrin repeat domain 36 2 2
MIRT678735 SRCAP Snf2 related CREBBP activator protein 2 2
MIRT678930 XPOT exportin for tRNA 2 2
MIRT678954 MYADM myeloid associated differentiation marker 2 2
MIRT679228 MAN2A2 mannosidase alpha class 2A member 2 2 2
MIRT679765 TLR6 toll like receptor 6 2 2
MIRT681992 HRH4 histamine receptor H4 2 2
MIRT687405 NSUN4 NOP2/Sun RNA methyltransferase family member 4 2 2
MIRT694570 RBMXL1 RNA binding motif protein, X-linked like 1 2 2
MIRT698449 TM4SF1 transmembrane 4 L six family member 1 2 2
MIRT706406 HAS2 hyaluronan synthase 2 2 2
MIRT706582 ZNF432 zinc finger protein 432 2 2
MIRT706838 VHLL VHL like 2 2
MIRT706909 DVL3 dishevelled segment polarity protein 3 2 2
MIRT707052 TRPV2 transient receptor potential cation channel subfamily V member 2 2 2
MIRT708583 C11orf54 chromosome 11 open reading frame 54 2 2
MIRT708988 CABP4 calcium binding protein 4 2 2
MIRT713041 ADRA2B adrenoceptor alpha 2B 2 2
MIRT713731 SUCO SUN domain containing ossification factor 2 2
MIRT714968 RAB21 RAB21, member RAS oncogene family 2 2
MIRT717485 PDE4DIP phosphodiesterase 4D interacting protein 2 2
MIRT722826 KLK2 kallikrein related peptidase 2 2 2
MIRT723305 MOGAT1 monoacylglycerol O-acyltransferase 1 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-1245a Trametinib 11707110 NSC758246 approved resistant High Melanoma cell line (M14) (500nM)
hsa-miR-1245a Vemurafenib 42611257 NSC761431 approved resistant High Melanoma cell line (M14) (500nM)
hsa-miR-1245a Trametinib 11707110 NSC758246 approved resistant High Melanoma cell line (M14) (1uM)
hsa-miR-1245a Vemurafenib 42611257 NSC761431 approved resistant High Melanoma cell line (M14) (1uM)
hsa-miR-1245a Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-miR-1245a Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)

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