pre-miRNA Information
pre-miRNA hsa-mir-4666a   
Genomic Coordinates chr1: 228462074 - 228462152
Description Homo sapiens miR-4666a stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4666a-5p
Sequence 10| AUACAUGUCAGAUUGUAUGCC |30
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1288210208 3 dbSNP
rs1333314792 5 dbSNP
rs562096649 7 dbSNP
rs1324809033 10 dbSNP
rs1027635037 13 dbSNP
rs1351630778 15 dbSNP
rs1034879562 18 dbSNP
rs1383267208 21 dbSNP
Putative Targets

Gene Information
Gene Symbol FKBP9   
Synonyms FKBP60, FKBP63, PPIase
Description FK506 binding protein 9
Transcript NM_007270   
Expression
Putative miRNA Targets on FKBP9
3'UTR of FKBP9
(miRNA target sites are highlighted)
>FKBP9|NM_007270|3'UTR
   1 ACCTGGCATGAACCAGATGGTGCCAGGGAGTACGTGACACCAAGCCACCTGTGTGGCAAGACGTGCAGTGAGGGTGCAAG
  81 GGTCTCTCAGAAGTTGCATCATTAGCCAGTAGTAGGTGGGTCACATAGTACCTGGTGTACACATCGGGGTGGGTTGATAT
 161 ATGGGGTGAGAAGTTTGGGCTGATCGCCAGTGATAGTAAACAAAATCTGTGCAGAGGGCCTTAGCATGGGATGTGTCCAG
 241 TATTGAAAAGGCTGCACTGCCAACCATGATTTGTGAGCCTTCTGGGAAATTTTGTTATTAAAGGAATATATAGTGTCAGA
 321 CGGAAGTTATAATCATCTTGGAGGAACCATAAGAAAAGGTGTCCAGGGTATCTATATAAAGAGGGTTAAATTTTTTTTTA
 401 ACTTGCTGGTTAAAACATTTTAGAAATATTCTAGAGATGGGCAGGAGAGTCAAAGGGCTTGCTTGCCCCAGCAGAGTTCC
 481 CAGCAGACAGCCATGGCTCTTCCCAGCAGCCTGTGCAAATTCTGATGATGGCCCCACCCCCGCACACGCACACGCACATC
 561 ATGCTTTTCCAGCTCATCACACCCCGCCCCACTATGGGCCTACCATTAATAGTGTATAACTTGGAGGTTAAAAGAGCCTT
 641 TTGGACAGAAAACTGGGCCAGGAAAAGGCATCTCAGACCACAAATAGAGAATTTGATTCCTCATTTGCCACATAAGTCAT
 721 CTGCTTAGCTTTTCCTTTCCTTTTTTTTTTTTTTTTTTTTTCTGGAGGCAGAGTCTCCCTTTGTCGCCAGGCTGGAGTGC
 801 AGTGGTGCCATCTCGGCTCACTGCAGCACTGTCTCGGCTCACTGCAGCCTCCGCCTCCCGTATTCAAGCGATTCTCCTGT
 881 CTCAGCCTCCTGAGTAGCTGGGACTACAGGTGTGCACCACCACGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGT
 961 TTCACTGTGTTGGCCAGGATGGTCTCAATCTCGACCTCGTGATCCGCCCACCTTGGCCTCCCAAAGTGTTGGGATTACAG
1041 GCGTGACTCACCATGCCCAGCCACTTAGTTTTTTCTTATTCCCACCTTTCTATCCCATAGAACACTCTTTTTTATCTTCC
1121 CTGAACCATATTGATGAGATAAATAGGGCTGGGGGCTGGGCCCCGCTGGTCACTCAACAGAGTATTTCCCTTGGCCGAGA
1201 TGGAAGTTTTGTCCCAATAGATGAGCTGCTGAGCATCAACAAGGTGACATTTTTCTGCTGCCCATTTGTGTCCTGGAGAC
1281 GGTGGTACCCTGAAGGCAGAGGCCAGCTGCCGCAAGACAGCAATGACAGTCCACCTGCCGACCTGATTCCTGCATCATGG
1361 AATAACCACATGGCTACCTTCTATCCTCTGTTCCCAAATGGTGGTGGCACTTATCCTGAAGTCGTCAATGATTTCCCTTT
1441 GAAACTACTTTATTTTACTAATTTAAACTATTTTGTACTGATGTAGCCCTGAGGTAGTTCATGAAAATGCTGTGCACTCA
1521 TTCCATGGAATAAATGTTGGAAAGCTGATCTTTTCTGATATAAAATGTTGAATGATATTAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ccGUA--UGUUAGACUGUACAua 5'
            |||  ||||  |||||| |  
Target 5' agCATCAACAAGGTGACATTTtt 3'
1232 - 1254 117.00 -10.76
2
miRNA  3' ccGUAUGUUA--GACUGUACaua 5'
            |||: |||  |  |||||   
Target 5' atCATGGAATAAC-CACATGgct 3'
1354 - 1375 112.00 -8.42
3
miRNA  3' ccGUAUGUUAGACUGU-ACAUa 5'
            | ||| || | |:| |||| 
Target 5' ggCCTACCAT-TAATAGTGTAt 3'
597 - 617 110.00 -8.00
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31501691 3 COSMIC
COSN31608635 7 COSMIC
COSN31598294 23 COSMIC
COSN30654117 25 COSMIC
COSN30524468 37 COSMIC
COSN31501321 42 COSMIC
COSN15929265 87 COSMIC
COSN30137715 138 COSMIC
COSN25039995 165 COSMIC
COSN25315442 400 COSMIC
COSN18877068 434 COSMIC
COSN19080474 478 COSMIC
COSN5656061 1006 COSMIC
COSN5656062 1316 COSMIC
COSN20762836 1340 COSMIC
COSN9985911 1492 COSMIC
rs142854193 548 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs748745387 4 dbSNP
rs1410409335 6 dbSNP
rs761546346 7 dbSNP
rs1409971664 9 dbSNP
rs1161573497 14 dbSNP
rs1472526048 19 dbSNP
rs767327471 20 dbSNP
rs749923092 21 dbSNP
rs755719646 24 dbSNP
rs779517748 29 dbSNP
rs371569693 34 dbSNP
rs375302857 35 dbSNP
rs1249769828 37 dbSNP
rs2893455 49 dbSNP
rs1276062948 52 dbSNP
rs563063318 63 dbSNP
rs1215599425 67 dbSNP
rs187615842 69 dbSNP
rs1285951593 73 dbSNP
rs1244412514 74 dbSNP
rs2392202 87 dbSNP
rs750143888 99 dbSNP
rs145567295 110 dbSNP
rs1355054060 111 dbSNP
rs1331001308 116 dbSNP
rs998531666 119 dbSNP
rs1339070337 137 dbSNP
rs1278013344 138 dbSNP
rs1031303077 139 dbSNP
rs1347275375 141 dbSNP
rs1321851091 144 dbSNP
rs1247370294 146 dbSNP
rs1395402186 147 dbSNP
rs546819739 149 dbSNP
rs1476177114 150 dbSNP
rs1185820095 153 dbSNP
rs1011865351 156 dbSNP
rs1018260065 159 dbSNP
rs1243575063 161 dbSNP
rs1256175156 167 dbSNP
rs1467747889 170 dbSNP
rs1273333068 171 dbSNP
rs1214992043 177 dbSNP
rs2893456 178 dbSNP
rs1316635106 179 dbSNP
rs1422712276 181 dbSNP
rs1258009926 185 dbSNP
rs964929747 186 dbSNP
rs976197374 187 dbSNP
rs1162336013 195 dbSNP
rs1371977763 196 dbSNP
rs571426426 204 dbSNP
rs1464162235 212 dbSNP
rs1459197806 220 dbSNP
rs1169675951 225 dbSNP
rs1160298449 226 dbSNP
rs1410396659 233 dbSNP
rs189086037 240 dbSNP
rs1170580390 251 dbSNP
rs1453470887 255 dbSNP
rs1253201765 257 dbSNP
rs983417873 261 dbSNP
rs1456084309 265 dbSNP
rs1231758174 268 dbSNP
rs2392203 278 dbSNP
rs909251731 279 dbSNP
rs1456049009 285 dbSNP
rs571542125 298 dbSNP
rs1380064633 299 dbSNP
rs2392204 304 dbSNP
rs542155631 306 dbSNP
rs1310909201 312 dbSNP
rs1376262222 322 dbSNP
rs148070251 322 dbSNP
rs3088060 323 dbSNP
rs11541013 336 dbSNP
rs1356184046 336 dbSNP
rs554693663 348 dbSNP
rs180993789 351 dbSNP
rs1395400256 356 dbSNP
rs2392205 359 dbSNP
rs1437358867 367 dbSNP
rs1212230141 369 dbSNP
rs1256507576 382 dbSNP
rs1481932454 388 dbSNP
rs1210734962 391 dbSNP
rs1236266511 391 dbSNP
rs1482664052 391 dbSNP
rs1282834451 400 dbSNP
rs1238331053 408 dbSNP
rs1307856046 411 dbSNP
rs1053272460 413 dbSNP
rs1179583576 418 dbSNP
rs1301033638 432 dbSNP
rs10525 434 dbSNP
rs1011639882 440 dbSNP
rs1417537131 468 dbSNP
rs1344211092 477 dbSNP
rs1159333702 480 dbSNP
rs1420377521 483 dbSNP
rs1017872796 488 dbSNP
rs1187871752 489 dbSNP
rs1183355266 502 dbSNP
rs1283798090 503 dbSNP
rs1475819094 512 dbSNP
rs1260123856 517 dbSNP
rs1214873997 523 dbSNP
rs964902435 524 dbSNP
rs1411614330 528 dbSNP
rs553164083 530 dbSNP
rs997646625 531 dbSNP
rs1320009085 532 dbSNP
rs1292673560 535 dbSNP
rs1417690931 539 dbSNP
rs1232669285 541 dbSNP
rs577786736 542 dbSNP
rs1294949205 543 dbSNP
rs142854193 548 dbSNP
rs557354254 549 dbSNP
rs575634317 554 dbSNP
rs1311104260 555 dbSNP
rs1163563789 561 dbSNP
rs1462472198 564 dbSNP
rs1420611324 565 dbSNP
rs1192079052 574 dbSNP
rs909273528 583 dbSNP
rs1410608570 584 dbSNP
rs542653080 586 dbSNP
rs1272681021 587 dbSNP
rs1348467244 605 dbSNP
rs11541014 609 dbSNP
rs963431510 610 dbSNP
rs1336994999 623 dbSNP
rs1301952733 638 dbSNP
rs139897946 639 dbSNP
rs1296023609 655 dbSNP
rs915839442 657 dbSNP
rs1276069504 671 dbSNP
rs1324678615 676 dbSNP
rs185337587 677 dbSNP
rs1395971907 682 dbSNP
rs1045674976 690 dbSNP
rs928487608 694 dbSNP
rs1374057637 699 dbSNP
rs934468359 703 dbSNP
rs1431703914 704 dbSNP
rs1249123944 713 dbSNP
rs1468970516 726 dbSNP
rs1194454151 727 dbSNP
rs956830246 730 dbSNP
rs1193237297 731 dbSNP
rs1469888596 734 dbSNP
rs1236363158 737 dbSNP
rs200068523 739 dbSNP
rs113770362 741 dbSNP
rs1300378878 741 dbSNP
rs1302264870 741 dbSNP
rs1326270810 741 dbSNP
rs1372539926 741 dbSNP
rs1394801241 741 dbSNP
rs1397800507 741 dbSNP
rs1433276536 741 dbSNP
rs1491167431 741 dbSNP
rs575917909 741 dbSNP
rs752337345 741 dbSNP
rs777106203 741 dbSNP
rs66517762 742 dbSNP
rs1426525572 743 dbSNP
rs1433047646 744 dbSNP
rs1455743421 744 dbSNP
rs1378610970 745 dbSNP
rs1171865589 748 dbSNP
rs1392169473 751 dbSNP
rs1430487439 757 dbSNP
rs1437205311 758 dbSNP
rs1197430584 761 dbSNP
rs1251191168 761 dbSNP
rs1491081320 761 dbSNP
rs1307697832 762 dbSNP
rs1338585858 762 dbSNP
rs1491023916 762 dbSNP
rs3109441 763 dbSNP
rs1438369236 765 dbSNP
rs1052896506 766 dbSNP
rs1293854266 766 dbSNP
rs1366821594 767 dbSNP
rs1335784787 771 dbSNP
rs540698110 773 dbSNP
rs118113675 776 dbSNP
rs3109442 780 dbSNP
rs1375298351 786 dbSNP
rs77844797 787 dbSNP
rs1342339269 789 dbSNP
rs1158168088 794 dbSNP
rs1470564711 797 dbSNP
rs1365546576 805 dbSNP
rs1226998517 811 dbSNP
rs550889164 815 dbSNP
rs1039074477 816 dbSNP
rs1211302725 817 dbSNP
rs1486508123 830 dbSNP
rs1281730664 831 dbSNP
rs1204128434 832 dbSNP
rs900764018 832 dbSNP
rs1350771392 834 dbSNP
rs1452935322 837 dbSNP
rs1224246240 846 dbSNP
rs1247600304 848 dbSNP
rs1294335538 853 dbSNP
rs1488353873 854 dbSNP
rs1192383553 855 dbSNP
rs1250407453 857 dbSNP
rs1450218503 858 dbSNP
rs569050452 860 dbSNP
rs569285615 861 dbSNP
rs1162860624 862 dbSNP
rs190150796 870 dbSNP
rs368860957 871 dbSNP
rs1188510069 875 dbSNP
rs1165232312 876 dbSNP
rs1349145226 877 dbSNP
rs1005439839 893 dbSNP
rs1192111659 894 dbSNP
rs1016363896 899 dbSNP
rs1285807342 906 dbSNP
rs1211246247 910 dbSNP
rs963759925 917 dbSNP
rs1274372504 922 dbSNP
rs776954291 924 dbSNP
rs1269974261 925 dbSNP
rs1365778357 928 dbSNP
rs1324013922 929 dbSNP
rs1395238028 931 dbSNP
rs1165568864 934 dbSNP
rs1407011725 940 dbSNP
rs990840141 950 dbSNP
rs1167087435 952 dbSNP
rs1475562177 954 dbSNP
rs1023681337 955 dbSNP
rs1253004068 956 dbSNP
rs148597903 956 dbSNP
rs1358047112 957 dbSNP
rs533662754 959 dbSNP
rs145018288 979 dbSNP
rs571541437 980 dbSNP
rs989020721 984 dbSNP
rs1288699929 993 dbSNP
rs1321541070 994 dbSNP
rs1327990338 997 dbSNP
rs914334591 999 dbSNP
rs1352663580 1000 dbSNP
rs538848704 1004 dbSNP
rs1038778038 1006 dbSNP
rs557683037 1007 dbSNP
rs1171364079 1015 dbSNP
rs1453414795 1023 dbSNP
rs1212182690 1024 dbSNP
rs1250465145 1027 dbSNP
rs900209395 1029 dbSNP
rs1479966528 1030 dbSNP
rs575851132 1041 dbSNP
rs536912539 1043 dbSNP
rs1188009982 1044 dbSNP
rs1139717 1057 dbSNP
rs1127604 1059 dbSNP
rs886666229 1069 dbSNP
rs1005061225 1074 dbSNP
rs1127607 1082 dbSNP
rs1305774521 1086 dbSNP
rs573248849 1093 dbSNP
rs1012780853 1095 dbSNP
rs1278896683 1097 dbSNP
rs796212838 1098 dbSNP
rs1161056167 1100 dbSNP
rs1389296245 1105 dbSNP
rs970741211 1108 dbSNP
rs982084657 1108 dbSNP
rs1375645002 1111 dbSNP
rs1456589097 1115 dbSNP
rs1035619597 1116 dbSNP
rs1139719 1127 dbSNP
rs565365373 1132 dbSNP
rs1255911227 1136 dbSNP
rs914428172 1138 dbSNP
rs947230296 1155 dbSNP
rs151187144 1156 dbSNP
rs544077442 1158 dbSNP
rs562659544 1165 dbSNP
rs1285035591 1166 dbSNP
rs921665420 1178 dbSNP
rs1352231249 1179 dbSNP
rs1291252750 1180 dbSNP
rs1231880636 1183 dbSNP
rs1270340062 1193 dbSNP
rs1330443944 1196 dbSNP
rs1208715712 1197 dbSNP
rs1304234550 1198 dbSNP
rs867945422 1214 dbSNP
rs529959068 1227 dbSNP
rs1444237508 1231 dbSNP
rs1159168440 1234 dbSNP
rs10142 1235 dbSNP
rs1416382763 1245 dbSNP
rs575286461 1248 dbSNP
rs1187800829 1260 dbSNP
rs1475748957 1261 dbSNP
rs1237150105 1262 dbSNP
rs1485655161 1273 dbSNP
rs1242823086 1278 dbSNP
rs559743701 1280 dbSNP
rs1332714488 1281 dbSNP
rs200192440 1282 dbSNP
rs1184092677 1284 dbSNP
rs908138809 1286 dbSNP
rs1472138069 1293 dbSNP
rs1156779580 1295 dbSNP
rs1380219320 1303 dbSNP
rs940980274 1305 dbSNP
rs1320767651 1308 dbSNP
rs545977564 1309 dbSNP
rs2953615 1312 dbSNP
rs1037951051 1313 dbSNP
rs899358402 1324 dbSNP
rs1012398695 1339 dbSNP
rs1168744579 1340 dbSNP
rs1332890049 1341 dbSNP
rs1428182551 1345 dbSNP
rs1045191114 1346 dbSNP
rs1190700165 1353 dbSNP
rs1467204501 1363 dbSNP
rs1252447231 1371 dbSNP
rs1373247617 1372 dbSNP
rs1213058554 1373 dbSNP
rs1488754201 1379 dbSNP
rs906586940 1380 dbSNP
rs1225012227 1386 dbSNP
rs1306659451 1389 dbSNP
rs1003551900 1400 dbSNP
rs1411216595 1406 dbSNP
rs1368231196 1409 dbSNP
rs1324615150 1414 dbSNP
rs1030967094 1417 dbSNP
rs1010602590 1424 dbSNP
rs551894049 1425 dbSNP
rs1021527691 1429 dbSNP
rs1452796611 1431 dbSNP
rs1238744154 1435 dbSNP
rs1194304930 1443 dbSNP
rs1373699288 1453 dbSNP
rs1434942060 1454 dbSNP
rs1278345952 1458 dbSNP
rs762633831 1459 dbSNP
rs1201111121 1470 dbSNP
rs968978253 1471 dbSNP
rs1480191448 1473 dbSNP
rs1275088875 1484 dbSNP
rs974522130 1485 dbSNP
rs570208564 1486 dbSNP
rs1302106497 1489 dbSNP
rs1233376336 1490 dbSNP
rs1207644164 1498 dbSNP
rs1332270682 1502 dbSNP
rs921696190 1518 dbSNP
rs1391253215 1521 dbSNP
rs1252767476 1522 dbSNP
rs537900870 1540 dbSNP
rs1127719 1556 dbSNP
rs1371624010 1563 dbSNP
rs145613042 1577 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084068. RNA binding protein: AGO2. Condition:CLIP_noemetine_SigmaAb HITS-CLIP data was present in GSM1084073. RNA binding protein: AGO2. Condition:CLIP_hippuristanol_rep1_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ccGUAUGUUAGAC-UGUACAUa 5'
            :| | || ||| :::|||: 
Target 5' uaUAGAGAAACUGUGUGUGUGu 3'
1 - 22
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084068
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noemetine_SigmaAb
Location of target site ENST00000242209.4 | 3UTR | CAUGUAUAGAGAAACUGUGUGUGUGUGUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1084073
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_hippuristanol_rep1_AbnovaAb
Location of target site ENST00000242209.4 | 3UTR | UAUAGAGAAACUGUGUGUGUGUGUGGU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
83 hsa-miR-4666a-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT057266 FAM35A family with sequence similarity 35 member A 2 2
MIRT059969 PATL1 PAT1 homolog 1, processing body mRNA decay factor 2 6
MIRT079031 TNRC6C trinucleotide repeat containing 6C 2 2
MIRT079631 DNAJB4 DnaJ heat shock protein family (Hsp40) member B4 2 2
MIRT086974 LANCL1 LanC like 1 2 2
MIRT091804 GOLGA4 golgin A4 2 2
MIRT229501 EIF1AX eukaryotic translation initiation factor 1A, X-linked 2 4
MIRT255972 WDR17 WD repeat domain 17 2 2
MIRT262975 ADO 2-aminoethanethiol dioxygenase 2 2
MIRT264774 PAFAH1B2 platelet activating factor acetylhydrolase 1b catalytic subunit 2 2 2
MIRT334169 CCND1 cyclin D1 2 6
MIRT345868 SRSF2 serine and arginine rich splicing factor 2 2 2
MIRT452477 DDX4 DEAD-box helicase 4 2 2
MIRT455764 TSPAN6 tetraspanin 6 2 4
MIRT461627 DCAF15 DDB1 and CUL4 associated factor 15 2 4
MIRT465169 TRPV2 transient receptor potential cation channel subfamily V member 2 2 4
MIRT468950 RPS14 ribosomal protein S14 2 6
MIRT483236 C2orf72 chromosome 2 open reading frame 72 2 8
MIRT498544 TMEM30B transmembrane protein 30B 2 2
MIRT500633 TXNIP thioredoxin interacting protein 2 4
MIRT504113 GPR158 G protein-coupled receptor 158 2 2
MIRT504428 ZNF85 zinc finger protein 85 2 6
MIRT505036 ZNF451 zinc finger protein 451 2 2
MIRT506526 MRPL17 mitochondrial ribosomal protein L17 2 6
MIRT508773 GSG1 germ cell associated 1 2 2
MIRT517297 ELF4 E74 like ETS transcription factor 4 2 6
MIRT519353 OBFC1 STN1, CST complex subunit 2 4
MIRT523891 ENPP6 ectonucleotide pyrophosphatase/phosphodiesterase 6 2 6
MIRT527509 ZNF134 zinc finger protein 134 2 2
MIRT531218 IFNGR2 interferon gamma receptor 2 2 2
MIRT535957 MOGAT1 monoacylglycerol O-acyltransferase 1 2 2
MIRT537229 GALNT7 polypeptide N-acetylgalactosaminyltransferase 7 2 4
MIRT537337 FKBP5 FK506 binding protein 5 2 2
MIRT539125 ARHGEF17 Rho guanine nucleotide exchange factor 17 2 2
MIRT539910 ISPD isoprenoid synthase domain containing 2 2
MIRT541527 MGAT4C MGAT4 family member C 2 2
MIRT546119 USP25 ubiquitin specific peptidase 25 2 2
MIRT548846 CERCAM cerebral endothelial cell adhesion molecule 2 2
MIRT549892 LINC00955 long intergenic non-protein coding RNA 955 2 2
MIRT549898 ADH4 alcohol dehydrogenase 4 (class II), pi polypeptide 2 2
MIRT550763 ENOX2 ecto-NOX disulfide-thiol exchanger 2 2 4
MIRT553200 UBE2A ubiquitin conjugating enzyme E2 A 2 2
MIRT553970 SRSF10 serine and arginine rich splicing factor 10 2 2
MIRT554092 SMU1 DNA replication regulator and spliceosomal factor 2 2
MIRT555208 PROX1 prospero homeobox 1 2 4
MIRT555834 PAX5 paired box 5 2 4
MIRT556865 JAZF1 JAZF zinc finger 1 2 2
MIRT558594 CREBL2 cAMP responsive element binding protein like 2 2 2
MIRT559690 AGO2 argonaute 2, RISC catalytic component 2 4
MIRT563312 ORC4 origin recognition complex subunit 4 2 2
MIRT563585 FAM229B family with sequence similarity 229 member B 2 2
MIRT563853 ALYREF Aly/REF export factor 2 4
MIRT565146 TUBB2A tubulin beta 2A class IIa 2 2
MIRT565769 SEPHS1 selenophosphate synthetase 1 2 2
MIRT568317 BACH1 BTB domain and CNC homolog 1 2 2
MIRT575387 Unc5b unc-5 netrin receptor B 2 4
MIRT607728 BDH1 3-hydroxybutyrate dehydrogenase 1 2 8
MIRT612691 PLXNA4 plexin A4 2 4
MIRT615916 GDPD1 glycerophosphodiester phosphodiesterase domain containing 1 2 2
MIRT629792 P2RY1 purinergic receptor P2Y1 2 2
MIRT632119 FKBP9 FK506 binding protein 9 2 2
MIRT645554 ZDHHC15 zinc finger DHHC-type containing 15 2 4
MIRT651479 WWC3 WWC family member 3 2 2
MIRT654138 RPH3A rabphilin 3A 2 6
MIRT655191 PHAX phosphorylated adaptor for RNA export 2 2
MIRT665543 UNC5B unc-5 netrin receptor B 2 5
MIRT668057 GRIK3 glutamate ionotropic receptor kainate type subunit 3 2 2
MIRT678978 CERS4 ceramide synthase 4 2 4
MIRT679124 RBM3 RNA binding motif (RNP1, RRM) protein 3 2 2
MIRT686776 AZF1 azoospermia factor 1 2 2
MIRT687144 PTPN12 protein tyrosine phosphatase, non-receptor type 12 2 2
MIRT691453 C21orf58 chromosome 21 open reading frame 58 2 2
MIRT691469 FAM98B family with sequence similarity 98 member B 2 2
MIRT697031 UHRF1BP1 UHRF1 binding protein 1 2 2
MIRT698401 TM9SF3 transmembrane 9 superfamily member 3 2 2
MIRT702056 RNMT RNA guanine-7 methyltransferase 2 2
MIRT705903 ADAM9 ADAM metallopeptidase domain 9 2 2
MIRT707491 MMADHC methylmalonic aciduria and homocystinuria, cblD type 2 2
MIRT708080 KLHL23 kelch like family member 23 2 2
MIRT709738 TRIM27 tripartite motif containing 27 2 2
MIRT710056 RWDD2A RWD domain containing 2A 2 2
MIRT710226 KCNK1 potassium two pore domain channel subfamily K member 1 2 2
MIRT712043 STYK1 serine/threonine/tyrosine kinase 1 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-4666a Doxorubicin 31703 NSC123127 approved sensitive High Triple-Negative Breast Cancer cell line (MDA-MB-231, MDA-MB-468)

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