pre-miRNA Information
pre-miRNA hsa-mir-1273h   
Genomic Coordinates chr16: 24203116 - 24203231
Description Homo sapiens miR-1273h stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-1273h-5p
Sequence 33| CUGGGAGGUCAAGGCUGCAGU |53
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1028034199 14 dbSNP
rs542383563 18 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol PPM1D   
Synonyms IDDGIP, PP2C-DELTA, WIP1
Description protein phosphatase, Mg2+/Mn2+ dependent 1D
Transcript NM_003620   
Expression
Putative miRNA Targets on PPM1D
3'UTR of PPM1D
(miRNA target sites are highlighted)
>PPM1D|NM_003620|3'UTR
   1 AATGCATCTGGGAAATGAGGTTTTTCCAAACTTAGGATATAAGAGGGCTTTTTAAATTTGGTGCCGATGTTGAACTTTTT
  81 TTAAGGGGAGAAAATTAAAAGAAATATACAGTTTGACTTTTTGGAATTCAGCAGTTTTATCCTGGCCTTGTACTTGCTTG
 161 TATTGTAAATGTGGATTTTGTAGATGTTAGGGTATAAGTTGCTGTAAAATTTGTGTAAATTTGTATCCACACAAATTCAG
 241 TCTCTGAATACACAGTATTCAGAGTCTCTGATACACAGTAATTGTGACAATAGGGCTAAATGTTTAAAGAAATCAAAAGA
 321 ATCTATTAGATTTTAGAAAAACATTTAAACTTTTTAAAATACTTATTAAAAAATTTGTATAAGCCACTTGTCTTGAAAAC
 401 TGTGCAACTTTTTAAAGTAAATTATTAAGCAGACTGGAAAAGTGATGTATTTTCATAGTGACCTGTGTTTCACTTAATGT
 481 TTCTTAGAGCCAAGTGTCTTTTAAACATTATTTTTTATTTCTGATTTCATAATTCAGAACTAAATTTTTCATAGAAGTGT
 561 TGAGCCATGCTACAGTTAGTCTTGTCCCAATTAAAATACTATGCAGTATCTCTTACATCAGTAGCATTTTTCTAAAACCT
 641 TAGTCATCAGATATGCTTACTAAATCTTCAGCATAGAAGGAAGTGTGTTTGCCTAAAACAATCTAAAACAATTCCCTTCT
 721 TTTTCATCCCAGACCAATGGCATTATTAGGTCTTAAAGTAGTTACTCCCTTCTCGTGTTTGCTTAAAATATGTGAAGTTT
 801 TCCTTGCTATTTCAATAACAGATGGTGCTGCTAATTCCCAACATTTCTTAAATTATTTTATATCATACAGTTTTCATTGA
 881 TTATATGGGTATATATTCATCTAATAAATCAGTGAACTGTTCCTCATGTTGCTGAATTTGTAGTTGTTGGTTTATTTTAA
 961 TGGTATGTACAAGTTGAGTATCCCTTATCCAAAATGCTTGGGACCAGAAGTGTTTCAGATTTTTTAAAATTTTGGAATAT
1041 TTGCTTTATACTGAGCTTTTGAGTGTTCCCAATCTGAAATTCAAAATGCTCTAATGAGCATTTCCTTTGAGCATCATGCC
1121 TGCTCTGAAAAAGTTTCTGATTCTGGAGCATTTTGGATTTTGGATTTTCAGATTAGGGATGCTTAACCTGGATTAACATT
1201 CTGTTGTGCCATGATCATGCTTTACAGTGAGTGTATTTTATTTATTTATTATTTTGTTTGTTTGTTTGAGATGGAGTCTC
1281 ACTCTGTCATCCAGGCTAGAGTGCAGTGGCGTGATCTCGGCTGACTGCAACCTCTGCCTCCCGGGTTCAAGTGATTCTCC
1361 TGCCTCAATCTCTCTCCCCAGAAGCTGGGATTACAGGTGTGTGCCACCACACCCGGCTAATTTTTTTTTTTTTTTTTGAG
1441 ATGGAGTCTAGCTCTGTCATCCAGGCTGGAGTGCAGTGGTGTGATCTCGGCTCCCTGCAACCTCTGCCTTCTGGGTTCCT
1521 GCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGAGATTACAGGCACGCGCCACTGTGCCCAGCCAATTTTTGTATTTTTA
1601 GTAGAGATGGGGTTTCACATGTCAGTCATGCTGGTCTTGATCTCCTGACCTCGTGATCCACCCGCCTCGACCTCCCAAAG
1681 TACTGGGATTACAGGCGTGAGCCACCGCATCCGGCCTGAGTTTTATGCTTTCAATGTATTTCTTACATTTCAGTTCAAGT
1761 GATTTTCATGTCTCAGCCTCCTGAGTAGCTGGAACTACAGGTGCGTGCCACCATGCCTGGCTAAGTTTTGTATTTTTAGT
1841 AGAGATGGGTTTTCATCATGTTGGCCAAGATGGTCTTGATCTCTTGACCTCATGATCCACCAGCCTAGGCCTCCCAAAGT
1921 GCTGGGATTACAGGTGTGAGCCACCGTGCCCAGCCAACTATGCCATTATTTAACCATGTCCACACATTCTGGTTATTTTC
2001 AATATTTTGCAGAAGATAATTCTTGATCGGTGTGTCTTATGCCACAAGGATTAAAATATGTATTCATTGCTACAAAACAA
2081 TATCTCGAAATTTAGCAGTTTAAAACAACAAATATTATCTCCAGTTTCTGAGCCTCAGAAATCTGAGAGTGGTTTAGCTG
2161 GGTGATAGTCTCGTGGTTTTGGTCAAGCTACCAACCAGGGCTACAATCTTTCGAAGGTGTCATTGGGGCTAGAAGATCTG
2241 CTTCCCGCAAGACTCACAGCTGTTGGCAGGAGACCTCAGTTTGTTGCCACATGTTCCCCTCCAGAGGGCCTCTCACAACA
2321 TGGCAGTTATTTGTCCCCAGAGCAAGCAACACCGGAGGGCAAGGAAGAAGCCATGATGTTTTTTGTAACCTAGCCTCTGA
2401 AAGTGTCATACCAATTCTGTATTTTGTTGGTCACACAGACCAAGTCAACTACAACGTGGGAGACTCCTACACAAGGCATG
2481 AATTCTAGGAGGTGGGCATTTTTAAGTGTCATCTGGAAGGAGGCTGTCACAACCTGGAAGTTAAAAGCATTGATATTCTG
2561 AAATACAGCGTGTATAACATTGTTTTAGTAGGGTGTGCAATAGTTATGTTTTGGTAATAGCATTAATGAACAATGTTATT
2641 TTCATCTTCCAGACATCTGGAAGATTGCTCTAGTGGAGTAAAACATCTTAATGTATTTTGTCCCTAAATAAACTATCTCA
2721 CTAACAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ugacGUCGGAACUGGAGGGUc 5'
              |||||| |:||||||| 
Target 5' ccacCAGCCTAGGCCTCCCAa 3'
1897 - 1917 173.00 -26.60
2
miRNA  3' ugacGUCGGAACUGGAGGGUc 5'
              | |||| ||||||||| 
Target 5' ccacCCGCCTCGACCTCCCAa 3'
1658 - 1678 169.00 -22.30
3
miRNA  3' ugACGUCGGAACUGGAGGGUc 5'
            |||| |||  :||||||: 
Target 5' acTGCAACCTCTGCCTCCCGg 3'
1324 - 1344 151.00 -28.70
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN28886753 26 COSMIC
COSN31507952 44 COSMIC
COSN26990055 46 COSMIC
COSN31525137 76 COSMIC
COSN20765083 154 COSMIC
COSN15720312 168 COSMIC
COSN31568926 505 COSMIC
COSN31519221 664 COSMIC
COSN26220841 766 COSMIC
COSN25040030 1415 COSMIC
COSN25040440 1416 COSMIC
COSN6415477 1700 COSMIC
COSN26673341 1934 COSMIC
COSN20958628 1947 COSMIC
COSN26244407 2073 COSMIC
COSN22624599 2223 COSMIC
COSN29325364 2414 COSMIC
COSN21798700 2622 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs917497148 4 dbSNP
rs1369512739 14 dbSNP
rs749114461 16 dbSNP
rs770916478 18 dbSNP
rs774214121 20 dbSNP
rs865930215 27 dbSNP
rs1483369234 28 dbSNP
rs774801686 32 dbSNP
rs1486434333 34 dbSNP
rs759042940 35 dbSNP
rs191317670 38 dbSNP
rs370345658 39 dbSNP
rs775101054 40 dbSNP
rs372906504 43 dbSNP
rs759575469 44 dbSNP
rs764324541 44 dbSNP
rs909973681 46 dbSNP
rs754231579 47 dbSNP
rs757644402 48 dbSNP
rs770418200 49 dbSNP
rs765756794 51 dbSNP
rs1235423756 54 dbSNP
rs547027468 56 dbSNP
rs941415894 58 dbSNP
rs1328274044 59 dbSNP
rs1389684557 63 dbSNP
rs114421707 66 dbSNP
rs539227762 67 dbSNP
rs370221881 69 dbSNP
rs1416953824 79 dbSNP
rs1210573893 81 dbSNP
rs183182855 81 dbSNP
rs922098535 100 dbSNP
rs150110957 102 dbSNP
rs763218102 106 dbSNP
rs890449444 108 dbSNP
rs549988197 111 dbSNP
rs1253328458 119 dbSNP
rs112343838 123 dbSNP
rs1440132779 127 dbSNP
rs138692362 130 dbSNP
rs1362058791 132 dbSNP
rs1473728855 136 dbSNP
rs1335739403 139 dbSNP
rs186902005 143 dbSNP
rs774414222 151 dbSNP
rs1389426982 166 dbSNP
rs1237008112 168 dbSNP
rs1459371555 189 dbSNP
rs1337652050 196 dbSNP
rs1307768658 199 dbSNP
rs1447497051 203 dbSNP
rs189752232 205 dbSNP
rs1400537045 208 dbSNP
rs1462768442 233 dbSNP
rs1032137600 240 dbSNP
rs1157592535 241 dbSNP
rs752613521 241 dbSNP
rs1468258938 242 dbSNP
rs1446601837 245 dbSNP
rs1057319550 248 dbSNP
rs1365089388 248 dbSNP
rs767756078 249 dbSNP
rs1251612257 250 dbSNP
rs1215963139 253 dbSNP
rs572740087 265 dbSNP
rs959484210 269 dbSNP
rs1011968285 271 dbSNP
rs1353096153 279 dbSNP
rs1261455177 283 dbSNP
rs960678802 284 dbSNP
rs1301099265 295 dbSNP
rs560806221 301 dbSNP
rs1331510892 302 dbSNP
rs1024998576 307 dbSNP
rs547861558 313 dbSNP
rs982922336 315 dbSNP
rs910088097 320 dbSNP
rs564711148 326 dbSNP
rs908125593 328 dbSNP
rs182055676 329 dbSNP
rs563297749 333 dbSNP
rs1393836376 344 dbSNP
rs760804697 349 dbSNP
rs1196096477 354 dbSNP
rs1478630617 356 dbSNP
rs73990937 360 dbSNP
rs561128767 366 dbSNP
rs922095212 367 dbSNP
rs1286940905 368 dbSNP
rs1448959638 368 dbSNP
rs1210288396 384 dbSNP
rs932171110 387 dbSNP
rs1332791797 394 dbSNP
rs1220518321 401 dbSNP
rs987557525 401 dbSNP
rs912005781 402 dbSNP
rs1282527014 403 dbSNP
rs765083239 405 dbSNP
rs1258991284 413 dbSNP
rs921345051 421 dbSNP
rs1195069477 426 dbSNP
rs530105284 434 dbSNP
rs1327850015 439 dbSNP
rs1051064747 447 dbSNP
rs892384454 452 dbSNP
rs1041707647 456 dbSNP
rs1415609509 459 dbSNP
rs1188192598 460 dbSNP
rs945308551 463 dbSNP
rs904524999 478 dbSNP
rs546822519 488 dbSNP
rs1043660303 499 dbSNP
rs1476567703 499 dbSNP
rs1002022931 511 dbSNP
rs750690658 511 dbSNP
rs1461188304 535 dbSNP
rs1165731110 552 dbSNP
rs1259774845 554 dbSNP
rs1210908785 560 dbSNP
rs1054122816 565 dbSNP
rs1033862417 566 dbSNP
rs896215942 567 dbSNP
rs1013674551 568 dbSNP
rs1025947749 571 dbSNP
rs1396922985 572 dbSNP
rs950381365 573 dbSNP
rs1353175785 574 dbSNP
rs894963674 575 dbSNP
rs1448047268 579 dbSNP
rs1354493043 580 dbSNP
rs527989080 594 dbSNP
rs1412102610 597 dbSNP
rs1424850061 600 dbSNP
rs141113581 602 dbSNP
rs906325198 604 dbSNP
rs1401996560 615 dbSNP
rs369736262 615 dbSNP
rs1004595805 617 dbSNP
rs1278906978 634 dbSNP
rs1014520222 641 dbSNP
rs1420211285 644 dbSNP
rs963029498 655 dbSNP
rs1480325041 661 dbSNP
rs1231214116 662 dbSNP
rs973613039 665 dbSNP
rs1202409425 671 dbSNP
rs1459021125 671 dbSNP
rs1317311078 674 dbSNP
rs1212767308 677 dbSNP
rs1029683272 680 dbSNP
rs1225560391 688 dbSNP
rs866636580 689 dbSNP
rs1346923342 692 dbSNP
rs975583002 693 dbSNP
rs921350943 695 dbSNP
rs1372034131 703 dbSNP
rs1277244519 707 dbSNP
rs1449726299 717 dbSNP
rs1401660989 720 dbSNP
rs955449607 727 dbSNP
rs987280688 733 dbSNP
rs1396996626 737 dbSNP
rs913941737 742 dbSNP
rs1418695370 755 dbSNP
rs1256808281 756 dbSNP
rs1484644007 775 dbSNP
rs146919769 776 dbSNP
rs1441470615 778 dbSNP
rs1263283172 792 dbSNP
rs1192796160 809 dbSNP
rs945339652 814 dbSNP
rs116741912 816 dbSNP
rs925160391 822 dbSNP
rs912072957 825 dbSNP
rs1315951343 826 dbSNP
rs1281612365 831 dbSNP
rs187946481 855 dbSNP
rs1378312795 861 dbSNP
rs977518834 862 dbSNP
rs1439300239 863 dbSNP
rs1054929509 866 dbSNP
rs1466908450 867 dbSNP
rs896234374 869 dbSNP
rs1453396215 882 dbSNP
rs533978423 882 dbSNP
rs1374233801 902 dbSNP
rs1047934140 903 dbSNP
rs375746720 903 dbSNP
rs1420328623 907 dbSNP
rs886131122 911 dbSNP
rs1192977432 914 dbSNP
rs925913229 920 dbSNP
rs1191553426 926 dbSNP
rs567196999 929 dbSNP
rs1239950699 942 dbSNP
rs1218193704 956 dbSNP
rs1353843187 966 dbSNP
rs962894521 967 dbSNP
rs936013344 968 dbSNP
rs1339967899 971 dbSNP
rs774311319 971 dbSNP
rs750416082 973 dbSNP
rs997431463 975 dbSNP
rs895093763 977 dbSNP
rs947904869 985 dbSNP
rs1381951128 989 dbSNP
rs1028523493 1005 dbSNP
rs955724887 1020 dbSNP
rs1046620512 1026 dbSNP
rs906377962 1051 dbSNP
rs1171832557 1053 dbSNP
rs1464541677 1067 dbSNP
rs1331897535 1069 dbSNP
rs913972710 1071 dbSNP
rs756259679 1073 dbSNP
rs1233782082 1075 dbSNP
rs1004561243 1083 dbSNP
rs1014656022 1085 dbSNP
rs898817896 1088 dbSNP
rs979406484 1089 dbSNP
rs1345394429 1090 dbSNP
rs1256269125 1094 dbSNP
rs1218749244 1105 dbSNP
rs1208011654 1111 dbSNP
rs1286584409 1114 dbSNP
rs994952046 1120 dbSNP
rs530520661 1123 dbSNP
rs1227190569 1126 dbSNP
rs1306163647 1128 dbSNP
rs1485286073 1144 dbSNP
rs536234750 1159 dbSNP
rs1269102510 1170 dbSNP
rs1433393580 1180 dbSNP
rs1192553106 1189 dbSNP
rs1311150472 1198 dbSNP
rs1029241561 1203 dbSNP
rs953725426 1204 dbSNP
rs937910315 1211 dbSNP
rs1461396209 1220 dbSNP
rs552825414 1228 dbSNP
rs9912525 1234 dbSNP
rs1416636199 1237 dbSNP
rs917798891 1253 dbSNP
rs112465676 1259 dbSNP
rs12949486 1262 dbSNP
rs558340477 1278 dbSNP
rs967550949 1279 dbSNP
rs977487918 1289 dbSNP
rs1295351617 1296 dbSNP
rs1391470713 1299 dbSNP
rs1260468384 1304 dbSNP
rs535053782 1311 dbSNP
rs575050022 1314 dbSNP
rs926048734 1316 dbSNP
rs957355265 1319 dbSNP
rs991932981 1320 dbSNP
rs1005844801 1322 dbSNP
rs1306364213 1323 dbSNP
rs1180608738 1324 dbSNP
rs1256084608 1325 dbSNP
rs1301479102 1335 dbSNP
rs915921006 1341 dbSNP
rs193245727 1342 dbSNP
rs947925338 1343 dbSNP
rs1046323981 1344 dbSNP
rs900158332 1351 dbSNP
rs1316262867 1358 dbSNP
rs1161136332 1365 dbSNP
rs1213104168 1368 dbSNP
rs927789857 1369 dbSNP
rs1180461279 1371 dbSNP
rs997145792 1378 dbSNP
rs940552251 1380 dbSNP
rs1240509360 1385 dbSNP
rs1036067936 1389 dbSNP
rs1212716479 1393 dbSNP
rs1028972639 1394 dbSNP
rs898955531 1404 dbSNP
rs994607130 1408 dbSNP
rs1288136746 1409 dbSNP
rs1211910981 1411 dbSNP
rs958138255 1412 dbSNP
rs1357310696 1414 dbSNP
rs891321449 1415 dbSNP
rs1374597749 1416 dbSNP
rs1311313661 1421 dbSNP
rs1370042544 1421 dbSNP
rs1388219900 1421 dbSNP
rs1424723135 1421 dbSNP
rs1428710796 1422 dbSNP
rs74464919 1437 dbSNP
rs1192998825 1439 dbSNP
rs1179650875 1440 dbSNP
rs1407969661 1441 dbSNP
rs1417870514 1442 dbSNP
rs1167446790 1457 dbSNP
rs1050476867 1477 dbSNP
rs1369162990 1480 dbSNP
rs1159832175 1481 dbSNP
rs1167380911 1489 dbSNP
rs1460945543 1502 dbSNP
rs1008781068 1510 dbSNP
rs1201372867 1512 dbSNP
rs1021065827 1516 dbSNP
rs1261236498 1519 dbSNP
rs966747891 1523 dbSNP
rs1286797754 1524 dbSNP
rs779853919 1538 dbSNP
rs1032380484 1539 dbSNP
rs959634885 1545 dbSNP
rs990776501 1555 dbSNP
rs1402683672 1558 dbSNP
rs755550090 1559 dbSNP
rs1331351994 1566 dbSNP
rs185311905 1567 dbSNP
rs1397717168 1568 dbSNP
rs1298520093 1569 dbSNP
rs74756190 1570 dbSNP
rs1222009806 1581 dbSNP
rs1423606994 1582 dbSNP
rs967518366 1596 dbSNP
rs534633060 1612 dbSNP
rs1033086879 1613 dbSNP
rs188582291 1616 dbSNP
rs957651446 1620 dbSNP
rs1372832674 1621 dbSNP
rs546836553 1625 dbSNP
rs1489385565 1629 dbSNP
rs1270959105 1637 dbSNP
rs1210170510 1645 dbSNP
rs192853147 1651 dbSNP
rs971452561 1653 dbSNP
rs931626665 1654 dbSNP
rs982420734 1654 dbSNP
rs1020938784 1661 dbSNP
rs1198825357 1662 dbSNP
rs149528809 1663 dbSNP
rs569474216 1664 dbSNP
rs531929103 1665 dbSNP
rs1413574454 1668 dbSNP
rs1184138847 1669 dbSNP
rs144054484 1672 dbSNP
rs568720320 1693 dbSNP
rs1162870296 1697 dbSNP
rs930367027 1698 dbSNP
rs1426114327 1704 dbSNP
rs1466347927 1707 dbSNP
rs777111665 1708 dbSNP
rs536675601 1713 dbSNP
rs747645998 1714 dbSNP
rs769491765 1717 dbSNP
rs1008585314 1726 dbSNP
rs113061974 1735 dbSNP
rs1257266116 1737 dbSNP
rs1196461136 1754 dbSNP
rs1319578074 1757 dbSNP
rs1278388345 1768 dbSNP
rs1227351672 1773 dbSNP
rs1413698908 1776 dbSNP
rs1285435002 1782 dbSNP
rs1449488700 1783 dbSNP
rs1024911045 1784 dbSNP
rs777515840 1788 dbSNP
rs903470787 1790 dbSNP
rs1401343173 1798 dbSNP
rs148240929 1799 dbSNP
rs749848693 1800 dbSNP
rs184246478 1805 dbSNP
rs549511502 1806 dbSNP
rs973153905 1807 dbSNP
rs1473090675 1810 dbSNP
rs771363729 1811 dbSNP
rs1237436441 1815 dbSNP
rs774735756 1821 dbSNP
rs931682157 1823 dbSNP
rs1258440259 1833 dbSNP
rs1220444209 1837 dbSNP
rs1319546900 1848 dbSNP
rs1306175873 1858 dbSNP
rs1291408417 1859 dbSNP
rs1051825713 1873 dbSNP
rs1353650173 1883 dbSNP
rs891387027 1884 dbSNP
rs558228130 1897 dbSNP
rs1449615587 1898 dbSNP
rs575392906 1906 dbSNP
rs1378180610 1915 dbSNP
rs944307871 1918 dbSNP
rs1434674350 1921 dbSNP
rs1042661256 1927 dbSNP
rs759897335 1937 dbSNP
rs188506921 1946 dbSNP
rs772270548 1947 dbSNP
rs1186352286 1961 dbSNP
rs554999596 1962 dbSNP
rs1441450950 1966 dbSNP
rs895196933 1972 dbSNP
rs79766598 1974 dbSNP
rs374108691 1976 dbSNP
rs1248045965 1983 dbSNP
rs1417598686 1987 dbSNP
rs970699159 1990 dbSNP
rs1004778992 2001 dbSNP
rs141486554 2003 dbSNP
rs368384012 2005 dbSNP
rs1177954116 2008 dbSNP
rs1375775785 2010 dbSNP
rs1058864 2011 dbSNP
rs1434034811 2021 dbSNP
rs574700667 2029 dbSNP
rs1217781273 2030 dbSNP
rs1370037785 2037 dbSNP
rs961899591 2050 dbSNP
rs1294379130 2054 dbSNP
rs540120646 2056 dbSNP
rs963194299 2057 dbSNP
rs973184960 2062 dbSNP
rs921703146 2074 dbSNP
rs953215909 2075 dbSNP
rs1421446650 2078 dbSNP
rs200507720 2080 dbSNP
rs866999330 2080 dbSNP
rs180882625 2087 dbSNP
rs560492378 2088 dbSNP
rs1426972614 2091 dbSNP
rs1191463165 2093 dbSNP
rs1487751542 2104 dbSNP
rs764285307 2111 dbSNP
rs945678034 2112 dbSNP
rs1269267407 2113 dbSNP
rs1488913643 2116 dbSNP
rs1359419658 2118 dbSNP
rs1221349398 2125 dbSNP
rs183763742 2141 dbSNP
rs1255875480 2142 dbSNP
rs1281507406 2153 dbSNP
rs1042691146 2163 dbSNP
rs924161791 2173 dbSNP
rs116786754 2174 dbSNP
rs1218321703 2183 dbSNP
rs1338623180 2188 dbSNP
rs1054325018 2190 dbSNP
rs895308650 2191 dbSNP
rs1385620708 2192 dbSNP
rs1012784302 2195 dbSNP
rs986263998 2198 dbSNP
rs1464465642 2199 dbSNP
rs1288718541 2200 dbSNP
rs1176885331 2204 dbSNP
rs1477296046 2205 dbSNP
rs910340594 2206 dbSNP
rs546364107 2207 dbSNP
rs766235555 2213 dbSNP
rs1479137590 2214 dbSNP
rs776555317 2218 dbSNP
rs111800097 2224 dbSNP
rs902853041 2228 dbSNP
rs934875494 2232 dbSNP
rs1316319929 2237 dbSNP
rs531845078 2243 dbSNP
rs893276244 2247 dbSNP
rs1013123876 2248 dbSNP
rs537337303 2249 dbSNP
rs548739994 2258 dbSNP
rs963224302 2260 dbSNP
rs189617187 2261 dbSNP
rs144203427 2262 dbSNP
rs994685780 2267 dbSNP
rs116005345 2275 dbSNP
rs907251332 2279 dbSNP
rs1316999551 2290 dbSNP
rs1342867078 2294 dbSNP
rs1462165507 2298 dbSNP
rs1367451095 2300 dbSNP
rs182317432 2311 dbSNP
rs186881513 2315 dbSNP
rs538240749 2316 dbSNP
rs967050535 2321 dbSNP
rs977062665 2322 dbSNP
rs1232521905 2323 dbSNP
rs1312182426 2331 dbSNP
rs769656204 2341 dbSNP
rs551890192 2354 dbSNP
rs368429475 2355 dbSNP
rs1054037301 2377 dbSNP
rs568913797 2378 dbSNP
rs762944600 2390 dbSNP
rs1027594885 2391 dbSNP
rs951967672 2396 dbSNP
rs1214582061 2400 dbSNP
rs1252591568 2403 dbSNP
rs916757730 2409 dbSNP
rs948232449 2411 dbSNP
rs559200341 2413 dbSNP
rs906602080 2414 dbSNP
rs1161003038 2415 dbSNP
rs1470477551 2418 dbSNP
rs910384228 2427 dbSNP
rs1385269388 2431 dbSNP
rs554762890 2434 dbSNP
rs1158596740 2438 dbSNP
rs1438318432 2442 dbSNP
rs944397950 2449 dbSNP
rs574504603 2454 dbSNP
rs534079951 2456 dbSNP
rs755553942 2465 dbSNP
rs899165737 2473 dbSNP
rs1326228514 2475 dbSNP
rs1393237431 2477 dbSNP
rs773146839 2481 dbSNP
rs995204883 2483 dbSNP
rs934338946 2484 dbSNP
rs1351417979 2487 dbSNP
rs1028893061 2495 dbSNP
rs1239477456 2499 dbSNP
rs1439234893 2512 dbSNP
rs1054710413 2515 dbSNP
rs1388100175 2525 dbSNP
rs893424113 2526 dbSNP
rs948996111 2533 dbSNP
rs777286459 2536 dbSNP
rs1008703313 2548 dbSNP
rs1035507479 2557 dbSNP
rs907384786 2570 dbSNP
rs554103122 2571 dbSNP
rs977093649 2580 dbSNP
rs1032717612 2594 dbSNP
rs577349984 2608 dbSNP
rs1480849803 2609 dbSNP
rs1278246757 2614 dbSNP
rs1358627240 2630 dbSNP
rs1015661960 2631 dbSNP
rs191966037 2632 dbSNP
rs916809155 2636 dbSNP
rs562867694 2637 dbSNP
rs1286223258 2638 dbSNP
rs1205607398 2641 dbSNP
rs1344062101 2647 dbSNP
rs1272800253 2652 dbSNP
rs748778003 2671 dbSNP
rs757716295 2677 dbSNP
rs1345742957 2687 dbSNP
rs1233947099 2704 dbSNP
rs181501746 2709 dbSNP
rs1397559871 2714 dbSNP
rs779405376 2723 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084068. RNA binding protein: AGO2. Condition:CLIP_noemetine_SigmaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ugacgucGGAACUGGAGGGUc 5'
                 ||| |:||||||| 
Target 5' -------CCUAGGCCUCCCAa 3'
1 - 14
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084068
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noemetine_SigmaAb
Location of target site ENST00000305921.3 | 3UTR | CCUAGGCCUCCCAAAGUGCUGGGAUUACAGGU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
494 hsa-miR-1273h-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT074355 TNRC6A trinucleotide repeat containing 6A 2 2
MIRT100721 TJAP1 tight junction associated protein 1 2 2
MIRT115545 MAZ MYC associated zinc finger protein 2 2
MIRT124982 XIAP X-linked inhibitor of apoptosis 2 4
MIRT139911 BTF3L4 basic transcription factor 3 like 4 2 6
MIRT177183 ARL5B ADP ribosylation factor like GTPase 5B 2 4
MIRT187994 MBD6 methyl-CpG binding domain protein 6 2 2
MIRT207410 MAT2A methionine adenosyltransferase 2A 2 6
MIRT241928 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 2 2
MIRT260110 KLHL21 kelch like family member 21 2 2
MIRT260358 XRCC6 X-ray repair cross complementing 6 2 6
MIRT266428 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT294663 ZNF548 zinc finger protein 548 2 2
MIRT351039 PLEKHB2 pleckstrin homology domain containing B2 2 2
MIRT379943 PRRG4 proline rich and Gla domain 4 2 2
MIRT398983 KAT7 lysine acetyltransferase 7 2 2
MIRT441465 BEST3 bestrophin 3 2 2
MIRT446750 ZNF491 zinc finger protein 491 2 2
MIRT449224 RAD51B RAD51 paralog B 2 2
MIRT450623 AQR aquarius intron-binding spliceosomal factor 2 2
MIRT451090 ZNF584 zinc finger protein 584 2 2
MIRT451558 CIAPIN1 cytokine induced apoptosis inhibitor 1 2 2
MIRT451736 CES3 carboxylesterase 3 2 2
MIRT452411 QDPR quinoid dihydropteridine reductase 2 2
MIRT452559 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT452851 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT452922 DISC1 disrupted in schizophrenia 1 2 2
MIRT453043 TANGO2 transport and golgi organization 2 homolog 2 4
MIRT453097 HOXC4 homeobox C4 2 2
MIRT453297 ZNF394 zinc finger protein 394 2 2
MIRT453593 ZNF557 zinc finger protein 557 2 2
MIRT453787 KBTBD12 kelch repeat and BTB domain containing 12 2 2
MIRT453987 CECR1 adenosine deaminase 2 2 2
MIRT454083 TMEM209 transmembrane protein 209 2 2
MIRT454652 FBXL18 F-box and leucine rich repeat protein 18 2 2
MIRT454753 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 2 2
MIRT455311 TTLL9 tubulin tyrosine ligase like 9 2 2
MIRT456468 SERAC1 serine active site containing 1 2 2
MIRT456554 TOMM20 translocase of outer mitochondrial membrane 20 2 2
MIRT456716 TMEM239 transmembrane protein 239 2 4
MIRT456796 SIGLEC14 sialic acid binding Ig like lectin 14 2 2
MIRT457487 SLC35F6 solute carrier family 35 member F6 2 2
MIRT457999 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT458130 TLCD2 TLC domain containing 2 2 2
MIRT459027 ZNF490 zinc finger protein 490 2 4
MIRT459119 FADS6 fatty acid desaturase 6 2 2
MIRT459315 HAVCR2 hepatitis A virus cellular receptor 2 2 2
MIRT459385 MPLKIP M-phase specific PLK1 interacting protein 2 2
MIRT459412 FAM83B family with sequence similarity 83 member B 2 2
MIRT459974 RFT1 RFT1 homolog 2 2
MIRT460480 FAM105A family with sequence similarity 105 member A 2 6
MIRT460586 FEM1A fem-1 homolog A 2 2
MIRT460920 NOA1 nitric oxide associated 1 2 4
MIRT461072 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT461590 DPH2 DPH2 homolog 2 2
MIRT461854 ZNF317 zinc finger protein 317 2 2
MIRT462176 ACADL acyl-CoA dehydrogenase, long chain 2 2
MIRT462446 GCDH glutaryl-CoA dehydrogenase 2 2
MIRT463854 WNT7B Wnt family member 7B 2 2
MIRT464310 UST uronyl 2-sulfotransferase 2 2
MIRT464815 UBE2B ubiquitin conjugating enzyme E2 B 2 2
MIRT465453 TOR2A torsin family 2 member A 2 2
MIRT466073 TMEM184C transmembrane protein 184C 2 2
MIRT466514 TBXA2R thromboxane A2 receptor 2 2
MIRT467072 SRRD SRR1 domain containing 2 2
MIRT469551 RARA retinoic acid receptor alpha 2 2
MIRT469741 RAB2B RAB2B, member RAS oncogene family 2 2
MIRT470759 PNPLA6 patatin like phospholipase domain containing 6 2 2
MIRT470875 PLXND1 plexin D1 2 2
MIRT470976 PITPNA phosphatidylinositol transfer protein alpha 2 2
MIRT471048 PIM3 Pim-3 proto-oncogene, serine/threonine kinase 2 2
MIRT471215 PHAX phosphorylated adaptor for RNA export 2 2
MIRT471246 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT471286 PGAM4 phosphoglycerate mutase family member 4 2 2
MIRT471467 PDE7B phosphodiesterase 7B 2 2
MIRT473069 MORN4 MORN repeat containing 4 2 4
MIRT473989 LRRC20 leucine rich repeat containing 20 2 2
MIRT474518 KLHDC8A kelch domain containing 8A 2 2
MIRT474990 KANSL1 KAT8 regulatory NSL complex subunit 1 2 2
MIRT475547 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U like 1 2 2
MIRT476350 GIGYF1 GRB10 interacting GYF protein 1 2 2
MIRT477298 EPHB2 EPH receptor B2 2 2
MIRT477933 DPM2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory 2 2
MIRT478282 DDX19A DEAD-box helicase 19A 2 4
MIRT478472 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT478559 CTNND1 catenin delta 1 2 2
MIRT478618 CTDNEP1 CTD nuclear envelope phosphatase 1 2 2
MIRT478834 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT479007 COL5A1 collagen type V alpha 1 chain 2 2
MIRT479166 CLSPN claspin 2 2
MIRT482454 ADAR adenosine deaminase, RNA specific 2 4
MIRT483019 KHSRP KH-type splicing regulatory protein 2 4
MIRT483798 CYP2W1 cytochrome P450 family 2 subfamily W member 1 2 6
MIRT486087 SLC7A5 solute carrier family 7 member 5 2 4
MIRT486304 SIPA1 signal-induced proliferation-associated 1 2 2
MIRT486490 MYH11 myosin heavy chain 11 2 2
MIRT486881 TSPYL4 TSPY like 4 2 2
MIRT487125 NCOR2 nuclear receptor corepressor 2 2 2
MIRT487542 TM6SF2 transmembrane 6 superfamily member 2 2 4
MIRT487676 B3GALT5 beta-1,3-galactosyltransferase 5 2 4
MIRT489251 TTLL1 tubulin tyrosine ligase like 1 2 4
MIRT489276 RBM8A RNA binding motif protein 8A 2 8
MIRT489496 CRLF3 cytokine receptor like factor 3 2 4
MIRT489571 SSBP2 single stranded DNA binding protein 2 2 2
MIRT489694 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT490166 TMEM63C transmembrane protein 63C 2 2
MIRT491199 MLLT1 MLLT1, super elongation complex subunit 2 4
MIRT491260 DHX40 DEAH-box helicase 40 2 2
MIRT491385 HAUS3 HAUS augmin like complex subunit 3 2 2
MIRT491548 YAE1D1 Yae1 domain containing 1 2 2
MIRT492722 PHF12 PHD finger protein 12 2 2
MIRT493866 FAM73B mitoguardin 2 2 4
MIRT494549 BAK1 BCL2 antagonist/killer 1 2 2
MIRT498586 KRT8 keratin 8 2 2
MIRT498722 SNTN sentan, cilia apical structure protein 2 6
MIRT499982 HIST1H2BD histone cluster 1 H2B family member d 2 4
MIRT503414 SLC25A45 solute carrier family 25 member 45 2 6
MIRT508491 FTO FTO, alpha-ketoglutarate dependent dioxygenase 2 2
MIRT508877 METTL14 methyltransferase like 14 2 2
MIRT509622 RRP7A ribosomal RNA processing 7 homolog A 2 4
MIRT510104 IRAK3 interleukin 1 receptor associated kinase 3 2 8
MIRT510139 PDGFRA platelet derived growth factor receptor alpha 2 4
MIRT510353 ZNF703 zinc finger protein 703 2 6
MIRT510620 TMEM167A transmembrane protein 167A 2 4
MIRT510786 SF3B3 splicing factor 3b subunit 3 2 6
MIRT511021 NRF1 nuclear respiratory factor 1 2 2
MIRT513925 GHITM growth hormone inducible transmembrane protein 2 2
MIRT514342 DNAH17 dynein axonemal heavy chain 17 2 4
MIRT515015 SUMF2 sulfatase modifying factor 2 2 2
MIRT515246 DUSP28 dual specificity phosphatase 28 2 2
MIRT516202 RPP30 ribonuclease P/MRP subunit p30 2 2
MIRT516435 ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 2 4
MIRT516666 ZNF860 zinc finger protein 860 2 4
MIRT518373 ZNF250 zinc finger protein 250 2 2
MIRT518930 LSG1 large 60S subunit nuclear export GTPase 1 2 2
MIRT519676 ZNF70 zinc finger protein 70 2 2
MIRT519902 ZFAND4 zinc finger AN1-type containing 4 2 4
MIRT519945 ZCCHC8 zinc finger CCHC-type containing 8 2 2
MIRT520321 UBXN2A UBX domain protein 2A 2 2
MIRT520606 TMEM41B transmembrane protein 41B 2 2
MIRT520663 TMEM11 transmembrane protein 11 2 2
MIRT520852 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT521443 RAD51 RAD51 recombinase 2 2
MIRT521671 PRKAR2A protein kinase cAMP-dependent type II regulatory subunit alpha 2 2
MIRT522281 NKAP NFKB activating protein 2 2
MIRT522333 NCKIPSD NCK interacting protein with SH3 domain 2 8
MIRT522535 MED28 mediator complex subunit 28 2 6
MIRT523478 GNG4 G protein subunit gamma 4 2 2
MIRT523672 FOPNL FGFR1OP N-terminal like 2 2
MIRT523715 FBXW2 F-box and WD repeat domain containing 2 2 4
MIRT523867 ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2 2 4
MIRT524043 DNAJC8 DnaJ heat shock protein family (Hsp40) member C8 2 2
MIRT524167 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT524928 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT526825 PHC1 polyhomeotic homolog 1 2 2
MIRT531017 TDGF1P3 teratocarcinoma-derived growth factor 1 pseudogene 3 2 2
MIRT536085 MBOAT2 membrane bound O-acyltransferase domain containing 2 2 2
MIRT540681 BMP3 bone morphogenetic protein 3 2 2
MIRT541708 TMEM33 transmembrane protein 33 2 2
MIRT541755 KLF8 Kruppel like factor 8 2 2
MIRT541888 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT545714 SPTLC2 serine palmitoyltransferase long chain base subunit 2 2 2
MIRT559054 C19orf47 chromosome 19 open reading frame 47 2 4
MIRT561748 PLAGL2 PLAG1 like zinc finger 2 2 2
MIRT562365 ETV3 ETS variant 3 2 2
MIRT562821 GCFC2 GC-rich sequence DNA-binding factor 2 2 2
MIRT562900 DNAH10OS dynein axonemal heavy chain 10 opposite strand 2 2
MIRT564452 SLC35E2 solute carrier family 35 member E2 2 5
MIRT569111 ONECUT3 one cut homeobox 3 2 2
MIRT569224 SUSD1 sushi domain containing 1 2 2
MIRT570271 ARPC3 actin related protein 2/3 complex subunit 3 2 2
MIRT570498 TFIP11 tuftelin interacting protein 11 2 2
MIRT570844 GPRC5C G protein-coupled receptor class C group 5 member C 2 2
MIRT571311 TPCN2 two pore segment channel 2 2 2
MIRT572077 EXOC8 exocyst complex component 8 2 2
MIRT572116 DNAJC24 DnaJ heat shock protein family (Hsp40) member C24 2 2
MIRT573054 TRIB1 tribbles pseudokinase 1 2 2
MIRT573483 IQSEC3 IQ motif and Sec7 domain 3 2 2
MIRT573656 HES6 hes family bHLH transcription factor 6 2 2
MIRT574343 ZBTB37 zinc finger and BTB domain containing 37 2 2
MIRT576494 Slc35e2 solute carrier family 35, member E2 2 4
MIRT608033 UBLCP1 ubiquitin like domain containing CTD phosphatase 1 2 2
MIRT611326 NANOS1 nanos C2HC-type zinc finger 1 2 2
MIRT613660 KIAA1210 KIAA1210 2 2
MIRT615638 ATF6 activating transcription factor 6 2 2
MIRT618573 RRAD RRAD, Ras related glycolysis inhibitor and calcium channel regulator 2 2
MIRT618865 MBL2 mannose binding lectin 2 2 2
MIRT618962 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619172 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620298 AQP6 aquaporin 6 2 2
MIRT620683 RFTN2 raftlin family member 2 2 2
MIRT621637 UBXN2B UBX domain protein 2B 2 2
MIRT621993 STK4 serine/threonine kinase 4 2 2
MIRT622421 NUDT19 nudix hydrolase 19 2 2
MIRT622804 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT624786 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT624968 ZNF665 zinc finger protein 665 2 4
MIRT625479 SMAD9 SMAD family member 9 2 2
MIRT626594 ACAA2 acetyl-CoA acyltransferase 2 2 4
MIRT626708 TRIM65 tripartite motif containing 65 2 2
MIRT626975 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627489 STRIP2 striatin interacting protein 2 2 2
MIRT628505 ZNF878 zinc finger protein 878 2 2
MIRT628533 ZNF701 zinc finger protein 701 2 2
MIRT628591 TMEM251 transmembrane protein 251 2 2
MIRT628818 SLC25A34 solute carrier family 25 member 34 2 2
MIRT628896 IGSF6 immunoglobulin superfamily member 6 2 2
MIRT628958 UBE2D4 ubiquitin conjugating enzyme E2 D4 (putative) 2 2
MIRT629005 OSBPL10 oxysterol binding protein like 10 2 2
MIRT629059 KIF1C kinesin family member 1C 2 2
MIRT629192 PAPOLA poly(A) polymerase alpha 2 2
MIRT629346 TMPRSS11BNL TMPRSS11B N-terminal like, pseudogene 2 2
MIRT629447 WIZ widely interspaced zinc finger motifs 2 2
MIRT629696 XKR4 XK related 4 2 2
MIRT629737 SCD5 stearoyl-CoA desaturase 5 2 2
MIRT629896 SPATA5 spermatogenesis associated 5 2 2
MIRT629953 GLP2R glucagon like peptide 2 receptor 2 2
MIRT630023 MTL5 testis expressed metallothionein like protein 2 2
MIRT630181 TLN1 talin 1 2 2
MIRT630325 PAQR5 progestin and adipoQ receptor family member 5 2 2
MIRT630389 MYH9 myosin heavy chain 9 2 4
MIRT630695 EXTL3 exostosin like glycosyltransferase 3 2 2
MIRT631054 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT631130 SYNJ2 synaptojanin 2 2 2
MIRT631374 COL4A3BP collagen type IV alpha 3 binding protein 2 2
MIRT631557 TRAF3IP2 TRAF3 interacting protein 2 2 2
MIRT631615 PCDHB11 protocadherin beta 11 2 2
MIRT631935 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT632109 SSR1 signal sequence receptor subunit 1 2 2
MIRT632168 CCL22 C-C motif chemokine ligand 22 2 2
MIRT632445 SGTB small glutamine rich tetratricopeptide repeat containing beta 2 2
MIRT632652 NAV1 neuron navigator 1 2 2
MIRT632688 MTMR10 myotubularin related protein 10 2 2
MIRT632828 IGF1 insulin like growth factor 1 2 2
MIRT632905 FRRS1 ferric chelate reductase 1 2 2
MIRT633027 DNAL1 dynein axonemal light chain 1 2 2
MIRT633379 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633440 KLLN killin, p53-regulated DNA replication inhibitor 2 2
MIRT633726 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT633832 WHAMM WAS protein homolog associated with actin, golgi membranes and microtubules 2 2
MIRT633862 ATP6V1A ATPase H+ transporting V1 subunit A 2 2
MIRT634042 NUP155 nucleoporin 155 2 2
MIRT634266 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT634374 RAP2B RAP2B, member of RAS oncogene family 2 2
MIRT634439 PDE7A phosphodiesterase 7A 2 2
MIRT634573 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT634620 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT634693 DSEL dermatan sulfate epimerase-like 2 2
MIRT634768 CD3D CD3d molecule 2 2
MIRT635024 WWTR1 WW domain containing transcription regulator 1 2 2
MIRT635384 NHLRC2 NHL repeat containing 2 2 2
MIRT635577 TTC9C tetratricopeptide repeat domain 9C 2 2
MIRT635793 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT635837 ZNF264 zinc finger protein 264 2 2
MIRT636043 ZSCAN29 zinc finger and SCAN domain containing 29 2 4
MIRT636070 ZNF280C zinc finger protein 280C 2 2
MIRT636697 ARSK arylsulfatase family member K 2 2
MIRT637438 ZNF324B zinc finger protein 324B 2 2
MIRT637582 PLD6 phospholipase D family member 6 2 2
MIRT637672 PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D 2 2
MIRT637887 SLC19A3 solute carrier family 19 member 3 2 4
MIRT638353 RBMS2 RNA binding motif single stranded interacting protein 2 2 4
MIRT638597 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT638821 CRTAP cartilage associated protein 2 2
MIRT638871 CEP97 centrosomal protein 97 2 4
MIRT639660 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT640200 TIMM50 translocase of inner mitochondrial membrane 50 2 2
MIRT641592 TNS4 tensin 4 2 2
MIRT644993 POLR2J3 RNA polymerase II subunit J3 2 2
MIRT645059 UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII 2 2
MIRT646948 UPK3BL uroplakin 3B like 1 2 2
MIRT647306 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT648300 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 4
MIRT649043 SLC1A2 solute carrier family 1 member 2 2 2
MIRT649884 SLFN12L schlafen family member 12 like 2 2
MIRT650196 DOCK7 dedicator of cytokinesis 7 2 2
MIRT654789 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT655667 NUP43 nucleoporin 43 2 2
MIRT655925 NDUFA4P1 NDUFA4, mitochondrial complex associated pseudogene 1 2 2
MIRT656433 MARCH6 membrane associated ring-CH-type finger 6 2 2
MIRT657713 GPC4 glypican 4 2 2
MIRT659302 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT659844 CAPZB capping actin protein of muscle Z-line beta subunit 2 2
MIRT660660 ANKFY1 ankyrin repeat and FYVE domain containing 1 2 2
MIRT661308 CPM carboxypeptidase M 2 2
MIRT661473 CHMP1B charged multivesicular body protein 1B 2 2
MIRT661906 EBNA1BP2 EBNA1 binding protein 2 2 2
MIRT662064 ZNF284 zinc finger protein 284 2 2
MIRT662491 ANGPT4 angiopoietin 4 2 2
MIRT662657 LRRC47 leucine rich repeat containing 47 2 2
MIRT662804 MSRB2 methionine sulfoxide reductase B2 2 2
MIRT663164 FGFR1OP FGFR1 oncogene partner 2 2
MIRT663376 ZNF770 zinc finger protein 770 2 4
MIRT663418 ZNF607 zinc finger protein 607 2 2
MIRT663990 WDR75 WD repeat domain 75 2 2
MIRT664157 APOBEC3F apolipoprotein B mRNA editing enzyme catalytic subunit 3F 2 4
MIRT664489 POLR3K RNA polymerase III subunit K 2 2
MIRT665058 CCDC77 coiled-coil domain containing 77 2 2
MIRT665080 CRIPT CXXC repeat containing interactor of PDZ3 domain 2 2
MIRT665420 WDR55 WD repeat domain 55 2 2
MIRT665716 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT665923 TBC1D19 TBC1 domain family member 19 2 4
MIRT666239 SLC38A7 solute carrier family 38 member 7 2 4
MIRT666840 PPTC7 PTC7 protein phosphatase homolog 2 2
MIRT667378 MOB1B MOB kinase activator 1B 2 2
MIRT667573 LONRF2 LON peptidase N-terminal domain and ring finger 2 2 2
MIRT667894 ING1 inhibitor of growth family member 1 2 2
MIRT667977 HECTD3 HECT domain E3 ubiquitin protein ligase 3 2 2
MIRT668197 GCNT4 glucosaminyl (N-acetyl) transferase 4, core 2 2 2
MIRT668279 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 2
MIRT668386 FAT3 FAT atypical cadherin 3 2 2
MIRT668444 FAM208A family with sequence similarity 208 member A 2 2
MIRT668998 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669180 CCNF cyclin F 2 2
MIRT669444 ATL3 atlastin GTPase 3 2 2
MIRT669661 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT669890 KIAA0754 KIAA0754 2 4
MIRT669973 SSR3 signal sequence receptor subunit 3 2 2
MIRT670153 SLC29A4 solute carrier family 29 member 4 2 2
MIRT670240 TRIM13 tripartite motif containing 13 2 2
MIRT670274 CBY3 chibby family member 3 2 2
MIRT670358 ULBP3 UL16 binding protein 3 2 4
MIRT670627 BVES blood vessel epicardial substance 2 2
MIRT670731 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670770 TRIM66 tripartite motif containing 66 2 2
MIRT670913 DESI1 desumoylating isopeptidase 1 2 2
MIRT671216 CLSTN1 calsyntenin 1 2 2
MIRT671398 ERCC6L2 ERCC excision repair 6 like 2 2 2
MIRT671427 TOX4 TOX high mobility group box family member 4 2 2
MIRT671654 TRUB2 TruB pseudouridine synthase family member 2 2 4
MIRT671702 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT672136 PLEKHH1 pleckstrin homology, MyTH4 and FERM domain containing H1 2 2
MIRT672395 SLC10A6 solute carrier family 10 member 6 2 2
MIRT672508 GGCX gamma-glutamyl carboxylase 2 2
MIRT672572 RNF24 ring finger protein 24 2 2
MIRT672789 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT673019 RBBP4 RB binding protein 4, chromatin remodeling factor 2 2
MIRT673190 C10orf76 chromosome 10 open reading frame 76 2 2
MIRT673372 ZNF124 zinc finger protein 124 2 2
MIRT673495 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT673852 CAPN7 calpain 7 2 2
MIRT673929 ZNF500 zinc finger protein 500 2 2
MIRT673986 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 2 2
MIRT674076 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674123 RPL7L1 ribosomal protein L7 like 1 2 2
MIRT674297 THAP5 THAP domain containing 5 2 2
MIRT674370 POLR3D RNA polymerase III subunit D 2 2
MIRT674641 NKRF NFKB repressing factor 2 2
MIRT674665 PLCE1 phospholipase C epsilon 1 2 2
MIRT674725 ZNF451 zinc finger protein 451 2 4
MIRT674779 NPR1 natriuretic peptide receptor 1 2 2
MIRT674889 RASSF9 Ras association domain family member 9 2 2
MIRT675017 SNX1 sorting nexin 1 2 2
MIRT675341 KLHL26 kelch like family member 26 2 2
MIRT675416 CLEC7A C-type lectin domain containing 7A 2 2
MIRT675497 HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 2 2
MIRT675615 EHD2 EH domain containing 2 2 2
MIRT675735 AHR aryl hydrocarbon receptor 2 2
MIRT675857 ATP1B4 ATPase Na+/K+ transporting family member beta 4 2 2
MIRT675990 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676213 TMEM91 transmembrane protein 91 2 2
MIRT676406 MRO maestro 2 2
MIRT677299 CPSF2 cleavage and polyadenylation specific factor 2 2 2
MIRT677387 PCNP PEST proteolytic signal containing nuclear protein 2 2
MIRT677859 ABI2 abl interactor 2 2 2
MIRT677965 ITGB3 integrin subunit beta 3 2 2
MIRT678175 CRCP CGRP receptor component 2 2
MIRT678273 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT678665 SCUBE3 signal peptide, CUB domain and EGF like domain containing 3 2 2
MIRT679003 TTC39B tetratricopeptide repeat domain 39B 2 2
MIRT679053 RMDN1 regulator of microtubule dynamics 1 2 2
MIRT679461 RHOF ras homolog family member F, filopodia associated 2 2
MIRT679513 RAB36 RAB36, member RAS oncogene family 2 2
MIRT679914 ZKSCAN3 zinc finger with KRAB and SCAN domains 3 2 2
MIRT680029 OSBPL2 oxysterol binding protein like 2 2 4
MIRT680245 NDUFA7 NADH:ubiquinone oxidoreductase subunit A7 2 2
MIRT680279 AKIP1 A-kinase interacting protein 1 2 2
MIRT680499 PRIM2 DNA primase subunit 2 2 2
MIRT680586 ZNF573 zinc finger protein 573 2 2
MIRT680629 KIAA1456 KIAA1456 2 2
MIRT680819 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT680998 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT681122 INTS7 integrator complex subunit 7 2 2
MIRT681161 IBA57 IBA57 homolog, iron-sulfur cluster assembly 2 2
MIRT681221 DUSP19 dual specificity phosphatase 19 2 2
MIRT681304 IKZF3 IKAROS family zinc finger 3 2 2
MIRT681341 BRI3BP BRI3 binding protein 2 2
MIRT681608 F2RL2 coagulation factor II thrombin receptor like 2 2 2
MIRT681779 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681892 SLC11A2 solute carrier family 11 member 2 2 2
MIRT682084 ITGA3 integrin subunit alpha 3 2 4
MIRT682139 SMS spermine synthase 2 2
MIRT682217 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682367 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682535 EXOSC2 exosome component 2 2 2
MIRT682618 COX6B1 cytochrome c oxidase subunit 6B1 2 2
MIRT683643 ZNF695 zinc finger protein 695 2 2
MIRT684008 FOLR1 folate receptor 1 2 2
MIRT684442 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684855 ZNF749 zinc finger protein 749 2 2
MIRT684956 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685044 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685095 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685382 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT685456 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT685810 SLC27A1 solute carrier family 27 member 1 2 2
MIRT685913 MOCS3 molybdenum cofactor synthesis 3 2 2
MIRT686665 TMEM120B transmembrane protein 120B 2 2
MIRT686955 SFT2D2 SFT2 domain containing 2 2 2
MIRT687118 QPCTL glutaminyl-peptide cyclotransferase like 2 2
MIRT687739 KIAA1328 KIAA1328 2 2
MIRT688063 GLUL glutamate-ammonia ligase 2 2
MIRT688191 FNIP1 folliculin interacting protein 1 2 2
MIRT688769 CDH7 cadherin 7 2 2
MIRT688979 ATP6AP1 ATPase H+ transporting accessory protein 1 2 2
MIRT689572 NUDT7 nudix hydrolase 7 2 2
MIRT689683 TMPRSS12 transmembrane protease, serine 12 2 2
MIRT689930 MANSC1 MANSC domain containing 1 2 2
MIRT690089 PNMA2 paraneoplastic Ma antigen 2 2 2
MIRT690190 C5orf45 MRN complex interacting protein 2 2
MIRT690246 CAMLG calcium modulating ligand 2 2
MIRT690411 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT690840 DSN1 DSN1 homolog, MIS12 kinetochore complex component 2 2
MIRT690889 FUT2 fucosyltransferase 2 2 2
MIRT691107 ADIPOQ adiponectin, C1Q and collagen domain containing 2 2
MIRT691229 DFNB59 pejvakin 2 2
MIRT691300 ZNF681 zinc finger protein 681 2 2
MIRT691366 GP5 glycoprotein V platelet 2 2
MIRT691797 WARS tryptophanyl-tRNA synthetase 2 2
MIRT692142 CEP104 centrosomal protein 104 2 2
MIRT692572 NCMAP non-compact myelin associated protein 2 2
MIRT692649 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT692744 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT693092 SCNM1 sodium channel modifier 1 2 2
MIRT693296 SYTL3 synaptotagmin like 3 2 2
MIRT693392 ZNF460 zinc finger protein 460 2 2
MIRT693530 ZNF708 zinc finger protein 708 2 2
MIRT693562 PIGR polymeric immunoglobulin receptor 2 2
MIRT694492 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT694722 LLGL1 LLGL1, scribble cell polarity complex component 2 2
MIRT694866 ZNF417 zinc finger protein 417 2 2
MIRT695070 ZNF17 zinc finger protein 17 2 2
MIRT695451 COX18 COX18, cytochrome c oxidase assembly factor 2 2
MIRT695724 ZNF117 zinc finger protein 117 2 2
MIRT695898 MED16 mediator complex subunit 16 2 2
MIRT696244 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT696259 TACO1 translational activator of cytochrome c oxidase I 2 2
MIRT696512 C3 complement C3 2 2
MIRT696560 TTC21B tetratricopeptide repeat domain 21B 2 2
MIRT696643 AGXT2 alanine--glyoxylate aminotransferase 2 2 2
MIRT696791 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT696819 PLLP plasmolipin 2 2
MIRT697088 GPKOW G-patch domain and KOW motifs 2 2
MIRT697153 INMT indolethylamine N-methyltransferase 2 2
MIRT697202 ZYG11A zyg-11 family member A, cell cycle regulator 2 2
MIRT697322 ZNF641 zinc finger protein 641 2 2
MIRT697578 YME1L1 YME1 like 1 ATPase 2 2
MIRT697619 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT698619 TES testin LIM domain protein 2 2
MIRT698804 STK38 serine/threonine kinase 38 2 2
MIRT698949 SPAST spastin 2 2
MIRT699083 SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 2 2
MIRT699430 SLC1A5 solute carrier family 1 member 5 2 2
MIRT699550 SIT1 signaling threshold regulating transmembrane adaptor 1 2 2
MIRT700324 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT700360 RAB33B RAB33B, member RAS oncogene family 2 2
MIRT700462 PURB purine rich element binding protein B 2 2
MIRT701677 MYADM myeloid associated differentiation marker 2 2
MIRT701757 MSL2 MSL complex subunit 2 2 2
MIRT701977 MIER3 MIER family member 3 2 2
MIRT703178 GPBP1 GC-rich promoter binding protein 1 2 2
MIRT703203 GOLGA3 golgin A3 2 2
MIRT703359 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT703425 FYTTD1 forty-two-three domain containing 1 2 2
MIRT703484 FNDC3B fibronectin type III domain containing 3B 2 2
MIRT703590 FBXO45 F-box protein 45 2 2
MIRT703806 EVI5 ecotropic viral integration site 5 2 2
MIRT703915 EPG5 ectopic P-granules autophagy protein 5 homolog 2 2
MIRT704234 DHDDS dehydrodolichyl diphosphate synthase subunit 2 2
MIRT704646 CLCC1 chloride channel CLIC like 1 2 2
MIRT705151 C11orf58 chromosome 11 open reading frame 58 2 2
MIRT705480 ASXL2 additional sex combs like 2, transcriptional regulator 2 2
MIRT705530 ARL10 ADP ribosylation factor like GTPase 10 2 2
MIRT705661 ANKRD40 ankyrin repeat domain 40 2 2
MIRT706144 ZNF674 zinc finger protein 674 2 2
MIRT706473 SNX27 sorting nexin family member 27 2 2
MIRT708254 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT708838 SCAND3 zinc finger BED-type containing 9 1 1
MIRT710437 BTNL3 butyrophilin like 3 2 2
MIRT711325 DPYSL5 dihydropyrimidinase like 5 2 2
MIRT716151 RBM48 RNA binding motif protein 48 2 2
MIRT717402 ZCCHC24 zinc finger CCHC-type containing 24 2 2
MIRT720866 ADCY5 adenylate cyclase 5 2 2
MIRT722226 ZNF503 zinc finger protein 503 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-1273h-5p Paclitaxel 36314 NSC125973 approved sensitive High Ovarian Cancer cell line (SKOV3)
hsa-miR-1273h-5p Tripterygium wilfordii Hook F resistant tissue
hsa-miR-1273h-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (MGC-803)

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