pre-miRNA Information
pre-miRNA hsa-mir-412   
Genomic Coordinates chr14: 101065447 - 101065537
Synonyms MIRN412, hsa-mir-412, MIR412
Description Homo sapiens miR-412 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-412-3p
Sequence 54| ACUUCACCUGGUCCACUAGCCGU |76
Evidence Not_experimental
Experiments
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
rs61992671 18 GWAS
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs369997462 1 dbSNP
rs1439693090 7 dbSNP
rs1301668924 11 dbSNP
rs534204576 13 dbSNP
rs775386036 14 dbSNP
rs762832140 15 dbSNP
rs1203323285 16 dbSNP
rs61992671 18 dbSNP
rs1022012324 19 dbSNP
rs1207609936 20 dbSNP
rs139967426 21 dbSNP
rs539487075 22 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ANTXR1   
Synonyms ATR, GAPO, TEM8
Description anthrax toxin receptor 1
Transcript NM_032208   
Other Transcripts NM_018153 , NM_053034   
Expression
Putative miRNA Targets on ANTXR1
3'UTR of ANTXR1
(miRNA target sites are highlighted)
>ANTXR1|NM_032208|3'UTR
   1 AGCCCAAAGTTCCTGCTCTGGGCTCTCTCAGAAACTTCAGGAGATGTTAGAACAAGTCTTTCCAGTTAGAGAAGAGGAGT
  81 GGTGATAAAGCCCACTGACCTTCACACATTCTAAAAATTGGTTGGCAATGCCAGTATACCAACAATCATGATCAGCTGAA
 161 AGAAACAGATATTTTAAATTGCCAGAAAACAAATGATGAGGCAACTACAGTCAGATTTATAGCCAGCCATCTATCACCTC
 241 TAGAAGGTTCCAGAGACAGTGAAACTGCAAGATGCTCTCAACAGGATTATGTCTCATGGAGACCAGTAAGAAAATCATTT
 321 ATCTGAAGGTGAAATGCAGAGTTGGATAAGAAATACATTGCTGGGTTTCTAAAATGCTGCCTTCCTGCCTCTACTCCACC
 401 TCCATCCCTGGACTTTGGACCCTTGGCCTAGGAGCCTAAGGACCTTCACCCCTGTGCACCACCCAAGAAAGAGGAAAACT
 481 TTGCCTACAACTTTGGAAATGCTGGGGTCCCTGGTGTGGTAAGAAACTCAACATCAGACGGGTATGCAGAAGGATGTTCT
 561 TCTGGGATTTGCAGGTACATAAAAAATGTATGGCATCTTTTCCTTGCAAATTCTTCCAGTTTCCAAGTGAGAAGGGGAGC
 641 AGGTGTTTACTGATGGAAAAGGTATGTTGCTATGTTGATGTGTAAGTGAAATCAGTTGTGTGCAATAGACAGGGGCGTAT
 721 TCATGGGAGCATCAGCCAGTTTCTAAAACCCACAGGCCATCAGCAGCTAGAGGTGGCTGGCTTTGGCCAGACATGGACCC
 801 TAAATCAACAGACAATGGCATTGTCGAAGAGCAACCTGTTAATGAATCATGTTAAAAATCAAGGTTTGGCTTCAGTTTAA
 881 ATCACTTGAGGTATGAAGTTTATCCTGTTTTCCAGAGATAAACATAAGTTGATCTTCCCAAAATACCATCATTAGGACCT
 961 ATCACACAATATCACTAGTTTTTTTTGTTTGTTTGTTTTTTGTTTTTTTTCTTGGTAAAGCCATGCACCACAGACTTCTG
1041 GGCAGAGCTGAGAGACAATGGTCCTGACATAATAAGGATCTTTGATTAACCCCCATAAGGCATGTGTGTGTATACAAATA
1121 TACTTCTCTTTGGCTTTTCGACATAGAACCTCAGCTGTTAACCAAGGGGAAATACATCAGATCTGCAACACAGAAATGCT
1201 CTGCCTGAAATTTCCACCATGCCTAGGACTCACCCCATTTATCCAGGTCTTTCTGGATCTGTTTAATCAATAAGCCCTAT
1281 AATCACTTGCTAAACACTGGGCTTCATCACCCAGGGATAAAAACAGAGATCATTGTCTTGGACCTCCTGCATCAGCCTAT
1361 TCAAAATTATCTCTCTCTCTAGCTTTCCACAAATCCTAAAATTCCTGTCCCAAGCCACCCAAATTCTCAGATCTTTTCTG
1441 GAACAAGGCAGAATATAAAATAAATATACATTTAGTGGCTTGGGCTATGGTCTCCAAAGATCCTTCAAAAATACATCAAG
1521 CCAGCTTCATTCACTCACTTTACTTAGAACAGAGATATAAGGGCCTGGGATGCATTTATTTTATCAATACCAATTTTTGT
1601 GGCCATGGCAGACATTGCTAATCAATCACAGCACTATTTCCTATTAAGCCCACTGATTTCTTCACAATCCTTCTCAAATT
1681 ACAATTCCAAAGAGCCGCCACTCAACAGTCAGATGAACCCAACAGTCAGATGAGAGAAATGAACCCTACTTGCTATCTCT
1761 ATCTTAGAAAGCAAAAACAAACAGGAGTTTCCAGGGAGAATGGGAAAGCCAGGGGGCATAAAAGGTACAGTCAGGGGAAA
1841 ATAGATCTAGGCAGAGTGCCTTAGTCAGGGACCACGGGCGCTGAATCTGCAGTGCCAACACCAAACTGACACATCTCCAG
1921 GTGTACCTCCAACCCTAGCCTTCTCCCACAGCTGCCTACAACAGAGTCTCCCAGCCTTCTCAGAGAGCTAAAACCAGAAA
2001 TTTCCAGACTCATGAAAGCAACCCCCCAGCCTCTCCCCAACCCTGCCGCATTGTCTAATTTTTAGAACACTAGGCTTCTT
2081 CTTTCATGTAGTTCCTCATAAGCAGGGGCCAGAATATCTCAGCCACCTGCAGTGACATTGCTGGACCCCTGAAAACCATT
2161 CCATAGGAGAATGGGTTCCCCAGGCTCACAGTGTAGAGACATTGAGCCCATCACAACTGTTTTGACTGCTGGCAGTCTAA
2241 AACAGTCCACCCACCCCATGGCACTGCCGCGTGATTCCCGCGGCCATTCAGAAGTTCAAGCCGAGATGCTGACGTTGCTG
2321 AGCAACGAGATGGTGAGCATCAGTGCAAATGCACCATTCAGCACATCAGTCATATGCCCAGTGCAGTTACAAGATGTTGT
2401 TTCGGCAAAGCATTTTGATGGAATAGGGAACTGCAAATGTATGATGATTTTGAAAAGGCTCAGCAGGATTTGTTCTTAAA
2481 CCGACTCAGTGTGTCATCCCCGGTTATTTAGAATTACAGTTAAGAAGGAGAAACTTCTATAAGACTGTATGAACAAGGTG
2561 ATATCTTCATAGTGGGCTATTACAGGCAGGAAAATGTTTTAACTGGTTTACAAAATCCATCAATACTTGTGTCATTCCCT
2641 GTAAAAGGCAGGAGACATGTGATTATGATCAGGAAACTGCACAAAATTATTGTTTTCAGCCCCCGTGTTATTGTCCTTTT
2721 GAACTGTTTTTTTTTTTATTAAAGCCAAATTTGTGTTGTATATATTCGTATTCCATGTGTTAGATGGAAGCATTTCCTAT
2801 CCAGTGTGAATAAAAAGAACAGTTGTAGTAAATTATTATAAAGCCGATGATATTTCATGGCAGGTTATTCTACCAAGCTG
2881 TGCTTGTTGGTTTTTCCCATGACTGTATTGCTTTTATAAATGTACAAATAGTTACTGAAATGACGAGACCCTTGTTTGCA
2961 CAGCATTAATAAGAACCTTGATAAGAACCATATTCTGTTGACAGCCAGCTCACAGTTTCTTGCCTGAAGCTTGGTGCACC
3041 CTCCAGTGAGACACAAGATCTCTCTTTTACCAAAGTTGAGAACAGAGCTGGTGGATTAATTAATAGTCTTCGATATCTGG
3121 CCATGGGTAACCTCATTGTAACTATCATCAGAATGGGCAGAGATGATCTTGAAGTGTCACATACACTAAAGTCCAAACAC
3201 TATGTCAGATGGGGGTAAAATCCATTAAAGAACAGGAAAAAATAATTATAAGATGATAAGCAAATGTTTCAGCCCAATGT
3281 CAACCCAGTTAAAAAAAAAATTAATGCTGTGTAAAATGGTTGAATTAGTTTGCAAACTATATAAAGACATATGCAGTAAA
3361 AAGTCTGTTAATGCACATCCTGTGGGAATGGAGTGTTCTAACCAATTGCCTTTTCTTGTTATCTGAGCTCTCCTATATTA
3441 TCATACTCAGATAACCAAATTAAAAGAATTAGAATATGATTTTTAATACACTTAACATTAAACTCTTCTAACTTTCTTCT
3521 TTCTGTGATAATTCAGAAGATAGTTATGGATCTTCAATGCCTCTGAGTCATTGTTATAAAAAATCAGTTATCACTATACC
3601 ATGCTATAGGAGACTGGGCAAAACCTGTACAATGACAACCCTGGAAGTTGCTTTTTTTAAAAAAATAATAAATTTCTTAA
3681 ATCAACTCTTTTTTCTGGTTGTCTGTTTGTTATAAAGTGCAACGTATTCAAGTCCTCAATATCCTGATCATAATACCATG
3761 CTATAGGAGACTGGGCAAAACCTGTACAATGACAACCCTGGAAGTTGCTTTTTTAAAAAAAATAATAAATTTCTTAAATC
3841 AAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ugccGAUCACCUGGUCCACUUca 5'
              :||   ||  |||||||  
Target 5' tcatTTATCTGA--AGGTGAAat 3'
315 - 335 127.00 -7.30
2
miRNA  3' ugCCGAU-CACCUGGUCCACUuca 5'
            | ||:  || || ||||||   
Target 5' aaGACTGTATGAACAAGGTGAtat 3'
2541 - 2564 121.00 -10.32
3
miRNA  3' ugcCGAUCACCUGGUCCACUUCa 5'
             |||:| |  || |||| :| 
Target 5' aatGCTGGGGTCCCTGGTGTGGt 3'
498 - 520 116.00 -18.50
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31508544 19 COSMIC
COSN30146054 30 COSMIC
COSN31601526 59 COSMIC
COSN30190929 101 COSMIC
COSN30103292 132 COSMIC
COSN10005806 208 COSMIC
COSN1852705 541 COSMIC
COSN28024479 765 COSMIC
COSN20096810 1011 COSMIC
COSN24292250 1345 COSMIC
COSN15277251 1656 COSMIC
COSN31581394 1697 COSMIC
COSN31515820 2034 COSMIC
COSN31569162 2230 COSMIC
COSN29183545 2327 COSMIC
COSN1852706 2332 COSMIC
COSN27097072 2503 COSMIC
COSN30531316 2508 COSMIC
COSN31488781 2529 COSMIC
COSN2462017 2556 COSMIC
COSN30116769 2592 COSMIC
COSN27899278 2604 COSMIC
COSN20096811 2658 COSMIC
COSN1852707 2695 COSMIC
COSN20096814 2738 COSMIC
COSN2535718 2738 COSMIC
COSN22190482 2768 COSMIC
COSN30176023 2832 COSMIC
COSN32097486 2850 COSMIC
COSN30526655 2924 COSMIC
COSN20090554 3081 COSMIC
COSN32064404 3467 COSMIC
COSN7081483 3542 COSMIC
COSN23926376 3659 COSMIC
COSN23597236 3733 COSMIC
COSN22233420 3764 COSMIC
COSN20167139 3823 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs374110727 3 dbSNP
rs1364299561 9 dbSNP
rs756377933 12 dbSNP
rs72903178 17 dbSNP
rs749773770 20 dbSNP
rs1200071703 21 dbSNP
rs755132706 22 dbSNP
rs1450812938 23 dbSNP
rs755310982 23 dbSNP
rs537600448 24 dbSNP
rs951824468 26 dbSNP
rs1390037444 36 dbSNP
rs552552835 37 dbSNP
rs371042917 40 dbSNP
rs568861880 44 dbSNP
rs546821111 68 dbSNP
rs566710460 77 dbSNP
rs1424304915 78 dbSNP
rs1383453212 82 dbSNP
rs1015316025 84 dbSNP
rs1313079392 85 dbSNP
rs1356850671 91 dbSNP
rs897913378 95 dbSNP
rs976141222 96 dbSNP
rs548286176 98 dbSNP
rs1397535349 101 dbSNP
rs994849026 120 dbSNP
rs1268948076 122 dbSNP
rs1339229547 126 dbSNP
rs1489759284 127 dbSNP
rs1293305789 128 dbSNP
rs1027814939 131 dbSNP
rs1357592951 132 dbSNP
rs1279523126 134 dbSNP
rs1237277296 150 dbSNP
rs958863480 167 dbSNP
rs190904745 170 dbSNP
rs1404548859 171 dbSNP
rs536813026 184 dbSNP
rs553293546 187 dbSNP
rs1024501636 202 dbSNP
rs945638468 209 dbSNP
rs1275624991 212 dbSNP
rs972025768 220 dbSNP
rs1406057214 221 dbSNP
rs981816746 223 dbSNP
rs1156718327 227 dbSNP
rs1473555996 233 dbSNP
rs1412432606 234 dbSNP
rs183230641 248 dbSNP
rs1198497483 251 dbSNP
rs1043956311 258 dbSNP
rs1210471928 259 dbSNP
rs1270606254 260 dbSNP
rs141086331 262 dbSNP
rs1486700360 265 dbSNP
rs938144909 269 dbSNP
rs1281587659 283 dbSNP
rs1203889907 290 dbSNP
rs751078692 296 dbSNP
rs1055179379 299 dbSNP
rs896559549 311 dbSNP
rs949435374 321 dbSNP
rs1475733060 331 dbSNP
rs1188177577 334 dbSNP
rs1276850861 337 dbSNP
rs1422850996 340 dbSNP
rs1433825307 350 dbSNP
rs1173903741 355 dbSNP
rs1389305889 359 dbSNP
rs1458740188 359 dbSNP
rs1376835703 378 dbSNP
rs1417330734 381 dbSNP
rs1468071017 385 dbSNP
rs1037456039 392 dbSNP
rs773692969 394 dbSNP
rs1326497978 395 dbSNP
rs1432175340 405 dbSNP
rs915115609 409 dbSNP
rs897124283 419 dbSNP
rs1194708021 428 dbSNP
rs1369266112 429 dbSNP
rs1269355433 437 dbSNP
rs1203381324 446 dbSNP
rs931784744 447 dbSNP
rs1281216873 451 dbSNP
rs1281308340 457 dbSNP
rs1361600634 458 dbSNP
rs1268433703 467 dbSNP
rs1350407578 474 dbSNP
rs1437373925 484 dbSNP
rs1203601764 489 dbSNP
rs116479524 491 dbSNP
rs1336029997 492 dbSNP
rs777267982 495 dbSNP
rs1360655290 498 dbSNP
rs1176593432 504 dbSNP
rs1027532472 507 dbSNP
rs890397170 516 dbSNP
rs887648376 540 dbSNP
rs756783787 542 dbSNP
rs1242042169 543 dbSNP
rs1195279906 551 dbSNP
rs1017394844 553 dbSNP
rs965768720 556 dbSNP
rs745589417 557 dbSNP
rs1193957053 565 dbSNP
rs994922797 566 dbSNP
rs1437503607 568 dbSNP
rs781216628 576 dbSNP
rs1342939340 579 dbSNP
rs1314512643 589 dbSNP
rs1021054564 593 dbSNP
rs1450337411 594 dbSNP
rs1049118135 595 dbSNP
rs1303141322 605 dbSNP
rs894678604 612 dbSNP
rs966370783 627 dbSNP
rs1024868830 644 dbSNP
rs1309446405 646 dbSNP
rs971673501 649 dbSNP
rs980096935 660 dbSNP
rs925537360 663 dbSNP
rs999477774 669 dbSNP
rs185236063 671 dbSNP
rs1416597468 687 dbSNP
rs1182765035 696 dbSNP
rs1480526104 697 dbSNP
rs1250130926 698 dbSNP
rs1392830289 699 dbSNP
rs575211222 701 dbSNP
rs918059199 707 dbSNP
rs989251292 714 dbSNP
rs949511874 715 dbSNP
rs1373618097 716 dbSNP
rs1237206416 717 dbSNP
rs544223123 718 dbSNP
rs1370868857 721 dbSNP
rs1290052448 724 dbSNP
rs1410040712 725 dbSNP
rs554611322 728 dbSNP
rs1364589784 735 dbSNP
rs1300674499 739 dbSNP
rs1459023130 753 dbSNP
rs1352076191 767 dbSNP
rs897149259 771 dbSNP
rs1419050008 774 dbSNP
rs1206914418 786 dbSNP
rs911682126 787 dbSNP
rs1271203059 790 dbSNP
rs1468034001 793 dbSNP
rs574849180 794 dbSNP
rs540379392 795 dbSNP
rs1489492910 796 dbSNP
rs1266150769 807 dbSNP
rs1214976747 809 dbSNP
rs1036687798 810 dbSNP
rs1180670917 813 dbSNP
rs887681000 816 dbSNP
rs930635018 819 dbSNP
rs190966567 820 dbSNP
rs1470879221 826 dbSNP
rs1007423731 827 dbSNP
rs76588489 851 dbSNP
rs114856200 859 dbSNP
rs1012912057 864 dbSNP
rs1045906288 881 dbSNP
rs546105157 887 dbSNP
rs1453661041 894 dbSNP
rs997684736 895 dbSNP
rs1161774891 900 dbSNP
rs1020664243 905 dbSNP
rs1429081403 925 dbSNP
rs1389982047 926 dbSNP
rs562800937 929 dbSNP
rs966820646 930 dbSNP
rs1196985112 937 dbSNP
rs769638159 942 dbSNP
rs779713234 948 dbSNP
rs759053800 970 dbSNP
rs1435199205 973 dbSNP
rs979061126 976 dbSNP
rs1336510686 978 dbSNP
rs766768760 979 dbSNP
rs1269977114 980 dbSNP
rs1032320869 982 dbSNP
rs57773251 983 dbSNP
rs1010588867 984 dbSNP
rs1334230582 985 dbSNP
rs548215768 988 dbSNP
rs1234962248 996 dbSNP
rs1294168438 996 dbSNP
rs1432297455 996 dbSNP
rs953116472 996 dbSNP
rs768508963 998 dbSNP
rs991001651 999 dbSNP
rs1436514085 1001 dbSNP
rs113053987 1003 dbSNP
rs1171250924 1003 dbSNP
rs1467722317 1003 dbSNP
rs1378429915 1004 dbSNP
rs918091821 1008 dbSNP
rs768846423 1012 dbSNP
rs200615065 1016 dbSNP
rs949539133 1017 dbSNP
rs973267090 1029 dbSNP
rs568100582 1034 dbSNP
rs1185318134 1042 dbSNP
rs150291609 1046 dbSNP
rs966254734 1050 dbSNP
rs183113292 1063 dbSNP
rs1250432565 1069 dbSNP
rs972036721 1069 dbSNP
rs1225782732 1070 dbSNP
rs1475225563 1071 dbSNP
rs1343635827 1072 dbSNP
rs1297776417 1081 dbSNP
rs1166315843 1091 dbSNP
rs1229768184 1096 dbSNP
rs774455648 1101 dbSNP
rs1332530355 1103 dbSNP
rs1048407857 1105 dbSNP
rs919183167 1107 dbSNP
rs930540250 1109 dbSNP
rs1049051273 1111 dbSNP
rs911202666 1121 dbSNP
rs376672488 1140 dbSNP
rs943281864 1141 dbSNP
rs78874580 1147 dbSNP
rs901677703 1153 dbSNP
rs1366655402 1158 dbSNP
rs1393411496 1167 dbSNP
rs997358744 1169 dbSNP
rs1249601863 1190 dbSNP
rs1483864620 1197 dbSNP
rs566934307 1200 dbSNP
rs538872556 1201 dbSNP
rs1311260058 1205 dbSNP
rs1354938840 1216 dbSNP
rs1274656515 1226 dbSNP
rs558795464 1227 dbSNP
rs1415410670 1234 dbSNP
rs1046228820 1248 dbSNP
rs1295055284 1254 dbSNP
rs1247690701 1256 dbSNP
rs1305759710 1284 dbSNP
rs1042566865 1287 dbSNP
rs1226582276 1292 dbSNP
rs907391433 1296 dbSNP
rs1408221056 1299 dbSNP
rs1372662686 1301 dbSNP
rs1308646280 1303 dbSNP
rs1251722240 1308 dbSNP
rs1388724440 1309 dbSNP
rs902249996 1317 dbSNP
rs1473121701 1320 dbSNP
rs1000545542 1322 dbSNP
rs569226516 1331 dbSNP
rs773773281 1333 dbSNP
rs958995783 1334 dbSNP
rs1252128716 1342 dbSNP
rs1053262988 1343 dbSNP
rs1012454808 1346 dbSNP
rs1291455131 1350 dbSNP
rs1212149971 1359 dbSNP
rs1357751017 1370 dbSNP
rs1267835972 1375 dbSNP
rs1226953168 1378 dbSNP
rs537810407 1385 dbSNP
rs554549781 1388 dbSNP
rs1436071036 1406 dbSNP
rs972912746 1407 dbSNP
rs918690802 1416 dbSNP
rs1427320610 1422 dbSNP
rs952792353 1423 dbSNP
rs888782504 1425 dbSNP
rs1156634621 1453 dbSNP
rs574825922 1466 dbSNP
rs1007334796 1467 dbSNP
rs540362356 1471 dbSNP
rs1412501907 1481 dbSNP
rs1198203586 1482 dbSNP
rs1476876163 1483 dbSNP
rs1247938853 1501 dbSNP
rs1431975241 1502 dbSNP
rs1452629303 1502 dbSNP
rs1247989029 1516 dbSNP
rs1331624187 1525 dbSNP
rs911235216 1531 dbSNP
rs774710313 1537 dbSNP
rs1343151800 1539 dbSNP
rs1172035549 1555 dbSNP
rs554276455 1565 dbSNP
rs1375002258 1572 dbSNP
rs1435561729 1584 dbSNP
rs1304717351 1585 dbSNP
rs1318436957 1588 dbSNP
rs1359927091 1594 dbSNP
rs1437240071 1598 dbSNP
rs1381619752 1600 dbSNP
rs188348993 1603 dbSNP
rs1019099868 1607 dbSNP
rs965797140 1608 dbSNP
rs772753367 1611 dbSNP
rs546044217 1612 dbSNP
rs1426836658 1615 dbSNP
rs1448377477 1617 dbSNP
rs79005407 1626 dbSNP
rs1039010516 1642 dbSNP
rs1187217504 1645 dbSNP
rs1466681583 1649 dbSNP
rs1026062116 1653 dbSNP
rs1231732416 1661 dbSNP
rs951970341 1664 dbSNP
rs1440868741 1666 dbSNP
rs1279169468 1669 dbSNP
rs1281024525 1670 dbSNP
rs1348233407 1683 dbSNP
rs1212564472 1685 dbSNP
rs199926227 1689 dbSNP
rs923207156 1697 dbSNP
rs1258490283 1698 dbSNP
rs1485243691 1700 dbSNP
rs986969968 1703 dbSNP
rs933180969 1704 dbSNP
rs1262987226 1708 dbSNP
rs1445585484 1713 dbSNP
rs1042239882 1720 dbSNP
rs1334362083 1734 dbSNP
rs1451720546 1745 dbSNP
rs192582042 1756 dbSNP
rs1169949328 1758 dbSNP
rs1451804169 1762 dbSNP
rs183704257 1764 dbSNP
rs1181589410 1768 dbSNP
rs144911905 1771 dbSNP
rs1394841068 1772 dbSNP
rs1239621902 1773 dbSNP
rs754230215 1786 dbSNP
rs1454905696 1787 dbSNP
rs1482886054 1795 dbSNP
rs948709920 1797 dbSNP
rs1343542242 1801 dbSNP
rs1053428191 1803 dbSNP
rs879879895 1805 dbSNP
rs981577918 1815 dbSNP
rs77136316 1817 dbSNP
rs1289386693 1823 dbSNP
rs1025676729 1824 dbSNP
rs1390661735 1829 dbSNP
rs1438621156 1830 dbSNP
rs1053703994 1841 dbSNP
rs201004379 1842 dbSNP
rs1381061234 1854 dbSNP
rs1284622968 1867 dbSNP
rs893301163 1876 dbSNP
rs549650233 1877 dbSNP
rs1302484228 1879 dbSNP
rs569403934 1880 dbSNP
rs1164654606 1881 dbSNP
rs1404165823 1890 dbSNP
rs1416396038 1891 dbSNP
rs1189116135 1895 dbSNP
rs1025825307 1896 dbSNP
rs1249933588 1904 dbSNP
rs762731610 1904 dbSNP
rs1184380937 1905 dbSNP
rs952823603 1913 dbSNP
rs1315839375 1915 dbSNP
rs984209313 1916 dbSNP
rs1219260992 1920 dbSNP
rs1323442680 1924 dbSNP
rs947658423 1927 dbSNP
rs1049987397 1931 dbSNP
rs763865937 1936 dbSNP
rs538247998 1946 dbSNP
rs1212338496 1955 dbSNP
rs1007652269 1963 dbSNP
rs532535675 1965 dbSNP
rs1456789225 1969 dbSNP
rs976768896 1976 dbSNP
rs112245417 1988 dbSNP
rs1166058601 1990 dbSNP
rs1457069176 1990 dbSNP
rs923207354 1991 dbSNP
rs1410281307 2005 dbSNP
rs1018591167 2007 dbSNP
rs1419955024 2012 dbSNP
rs1266685113 2014 dbSNP
rs1189549302 2022 dbSNP
rs984084660 2022 dbSNP
rs149056777 2023 dbSNP
rs1193164239 2024 dbSNP
rs372495932 2026 dbSNP
rs993224437 2028 dbSNP
rs978378208 2038 dbSNP
rs923798248 2040 dbSNP
rs376093283 2043 dbSNP
rs538148601 2045 dbSNP
rs936504551 2048 dbSNP
rs548904087 2049 dbSNP
rs73937220 2053 dbSNP
rs1388044343 2059 dbSNP
rs1459856550 2059 dbSNP
rs1022822487 2067 dbSNP
rs1435068817 2075 dbSNP
rs1325106147 2088 dbSNP
rs750444741 2096 dbSNP
rs1322980161 2105 dbSNP
rs755995297 2110 dbSNP
rs1394987572 2123 dbSNP
rs143103870 2130 dbSNP
rs1377312258 2132 dbSNP
rs1173980361 2137 dbSNP
rs1296110383 2140 dbSNP
rs779873639 2141 dbSNP
rs928614711 2146 dbSNP
rs1463534404 2148 dbSNP
rs1249602928 2149 dbSNP
rs1046077345 2154 dbSNP
rs934775956 2159 dbSNP
rs187348942 2164 dbSNP
rs988891901 2168 dbSNP
rs192680277 2174 dbSNP
rs1207261847 2175 dbSNP
rs947525458 2176 dbSNP
rs1331986192 2185 dbSNP
rs1383159420 2187 dbSNP
rs994432283 2188 dbSNP
rs539594041 2194 dbSNP
rs1467826532 2203 dbSNP
rs1026280988 2205 dbSNP
rs10189931 2214 dbSNP
rs1391970877 2219 dbSNP
rs576344809 2223 dbSNP
rs1040450205 2224 dbSNP
rs1253873446 2230 dbSNP
rs542126117 2231 dbSNP
rs77329712 2243 dbSNP
rs993691261 2248 dbSNP
rs1047449984 2260 dbSNP
rs887639647 2269 dbSNP
rs964110194 2270 dbSNP
rs1006022691 2271 dbSNP
rs184869415 2272 dbSNP
rs1340235965 2280 dbSNP
rs1480462929 2281 dbSNP
rs1029668297 2283 dbSNP
rs115111465 2285 dbSNP
rs1254124741 2303 dbSNP
rs978070045 2314 dbSNP
rs956048527 2315 dbSNP
rs578159197 2327 dbSNP
rs563987069 2328 dbSNP
rs1418419876 2341 dbSNP
rs1406886003 2356 dbSNP
rs968768819 2357 dbSNP
rs1189384506 2395 dbSNP
rs748301466 2404 dbSNP
rs188401252 2405 dbSNP
rs1247744755 2417 dbSNP
rs916386935 2425 dbSNP
rs1483738701 2441 dbSNP
rs1273168202 2442 dbSNP
rs1196884625 2449 dbSNP
rs192765067 2455 dbSNP
rs947848071 2459 dbSNP
rs1263986762 2462 dbSNP
rs944319870 2463 dbSNP
rs1041295198 2465 dbSNP
rs549514212 2467 dbSNP
rs1287927560 2468 dbSNP
rs906206123 2469 dbSNP
rs929622926 2476 dbSNP
rs562735866 2478 dbSNP
rs1047347207 2483 dbSNP
rs1386092085 2484 dbSNP
rs928959440 2489 dbSNP
rs772261338 2502 dbSNP
rs184176081 2503 dbSNP
rs1005749939 2508 dbSNP
rs1271388721 2535 dbSNP
rs1307252563 2536 dbSNP
rs148234853 2540 dbSNP
rs1044217381 2541 dbSNP
rs1276982786 2544 dbSNP
rs905693421 2546 dbSNP
rs899964534 2558 dbSNP
rs771308735 2559 dbSNP
rs1335879010 2566 dbSNP
rs1267954383 2570 dbSNP
rs1187232046 2573 dbSNP
rs956123426 2574 dbSNP
rs1353112544 2582 dbSNP
rs1030154775 2583 dbSNP
rs1010261328 2584 dbSNP
rs1021599233 2591 dbSNP
rs967445098 2591 dbSNP
rs968800055 2593 dbSNP
rs985532445 2596 dbSNP
rs1258295154 2597 dbSNP
rs1318301070 2603 dbSNP
rs568758767 2611 dbSNP
rs911417198 2614 dbSNP
rs1030905584 2620 dbSNP
rs957963004 2627 dbSNP
rs965553499 2628 dbSNP
rs1171440147 2641 dbSNP
rs1476736985 2642 dbSNP
rs1378905777 2643 dbSNP
rs1196033422 2644 dbSNP
rs1184671810 2648 dbSNP
rs533908505 2652 dbSNP
rs1207253625 2655 dbSNP
rs1418563665 2656 dbSNP
rs58786516 2657 dbSNP
rs752322230 2657 dbSNP
rs1285181949 2658 dbSNP
rs1200145395 2661 dbSNP
rs930204620 2665 dbSNP
rs916418009 2667 dbSNP
rs983081117 2668 dbSNP
rs1373170938 2674 dbSNP
rs908848339 2677 dbSNP
rs202088047 2683 dbSNP
rs1295066629 2687 dbSNP
rs1313018860 2687 dbSNP
rs1360366751 2690 dbSNP
rs1432673483 2690 dbSNP
rs753386936 2696 dbSNP
rs1345608897 2700 dbSNP
rs1450867053 2700 dbSNP
rs547771122 2705 dbSNP
rs1044133426 2706 dbSNP
rs981916740 2708 dbSNP
rs573869809 2712 dbSNP
rs1455039006 2714 dbSNP
rs189884499 2718 dbSNP
rs1229526906 2721 dbSNP
rs1185332100 2725 dbSNP
rs1300106415 2725 dbSNP
rs1415416237 2726 dbSNP
rs938542954 2726 dbSNP
rs1216305944 2727 dbSNP
rs1272347315 2727 dbSNP
rs1341320605 2727 dbSNP
rs1491021829 2727 dbSNP
rs371108941 2727 dbSNP
rs539385679 2727 dbSNP
rs57223047 2727 dbSNP
rs796495010 2727 dbSNP
rs878880076 2727 dbSNP
rs929679894 2727 dbSNP
rs1362380759 2728 dbSNP
rs1445266061 2738 dbSNP
rs77138574 2738 dbSNP
rs79490988 2739 dbSNP
rs1312918380 2754 dbSNP
rs181100787 2761 dbSNP
rs777234451 2762 dbSNP
rs1368222287 2764 dbSNP
rs1346077145 2767 dbSNP
rs764876318 2768 dbSNP
rs909517117 2769 dbSNP
rs941598923 2791 dbSNP
rs556728502 2795 dbSNP
rs1420587331 2810 dbSNP
rs1010125415 2824 dbSNP
rs1474321575 2825 dbSNP
rs1259911279 2844 dbSNP
rs576280061 2846 dbSNP
rs1482756006 2847 dbSNP
rs1231308121 2850 dbSNP
rs535658277 2860 dbSNP
rs1444161289 2861 dbSNP
rs900037952 2865 dbSNP
rs1308007034 2873 dbSNP
rs1288804970 2874 dbSNP
rs1226417869 2886 dbSNP
rs904519834 2887 dbSNP
rs998759665 2889 dbSNP
rs1408904213 2901 dbSNP
rs1241389525 2920 dbSNP
rs759998438 2922 dbSNP
rs1475621097 2941 dbSNP
rs1190348622 2943 dbSNP
rs1393024067 2945 dbSNP
rs1453471121 2946 dbSNP
rs1018345446 2950 dbSNP
rs1420536352 2954 dbSNP
rs1173843842 2955 dbSNP
rs184507428 2965 dbSNP
rs903254321 2977 dbSNP
rs1248422923 2981 dbSNP
rs761889341 2984 dbSNP
rs1398407945 2992 dbSNP
rs1480888341 2994 dbSNP
rs1316865683 2997 dbSNP
rs866100191 2998 dbSNP
rs1026192699 3011 dbSNP
rs1469641943 3029 dbSNP
rs538456101 3032 dbSNP
rs188905231 3035 dbSNP
rs1369190208 3037 dbSNP
rs1032992595 3040 dbSNP
rs951638849 3043 dbSNP
rs911373241 3045 dbSNP
rs957328386 3046 dbSNP
rs908905710 3056 dbSNP
rs540624877 3073 dbSNP
rs1023498586 3074 dbSNP
rs1293434218 3076 dbSNP
rs141759362 3077 dbSNP
rs982333048 3080 dbSNP
rs1397135706 3088 dbSNP
rs1326998175 3092 dbSNP
rs1456855404 3095 dbSNP
rs1362299823 3100 dbSNP
rs1161324468 3101 dbSNP
rs1419728710 3105 dbSNP
rs181988074 3112 dbSNP
rs774155767 3113 dbSNP
rs951217363 3125 dbSNP
rs1253335112 3128 dbSNP
rs982503026 3139 dbSNP
rs909559482 3140 dbSNP
rs1262092747 3143 dbSNP
rs1216123447 3160 dbSNP
rs1311090492 3172 dbSNP
rs761370116 3174 dbSNP
rs891624810 3181 dbSNP
rs1040020090 3182 dbSNP
rs1373841639 3187 dbSNP
rs1304560011 3189 dbSNP
rs145525376 3194 dbSNP
rs1467836790 3203 dbSNP
rs1042979297 3207 dbSNP
rs904555710 3212 dbSNP
rs934205623 3213 dbSNP
rs1378947421 3216 dbSNP
rs138148411 3217 dbSNP
rs1436455401 3222 dbSNP
rs1018669446 3233 dbSNP
rs73937221 3237 dbSNP
rs1187895895 3244 dbSNP
rs1426494395 3245 dbSNP
rs1263656854 3258 dbSNP
rs1186736971 3260 dbSNP
rs1482726126 3272 dbSNP
rs1157557677 3275 dbSNP
rs1408059461 3278 dbSNP
rs1350626257 3279 dbSNP
rs1281627466 3280 dbSNP
rs1227418741 3285 dbSNP
rs1325047627 3289 dbSNP
rs750698342 3291 dbSNP
rs998643680 3291 dbSNP
rs1378750157 3297 dbSNP
rs531762417 3302 dbSNP
rs1161948829 3317 dbSNP
rs1167868120 3321 dbSNP
rs1460461189 3325 dbSNP
rs1374513598 3329 dbSNP
rs72903180 3338 dbSNP
rs1054435565 3341 dbSNP
rs1422825647 3342 dbSNP
rs984365435 3343 dbSNP
rs1017152904 3351 dbSNP
rs1189674916 3363 dbSNP
rs749879988 3368 dbSNP
rs893172524 3370 dbSNP
rs1250518979 3371 dbSNP
rs1195668745 3377 dbSNP
rs562196062 3379 dbSNP
rs1253396911 3398 dbSNP
rs1023529604 3403 dbSNP
rs905093991 3404 dbSNP
rs141031109 3410 dbSNP
rs377662113 3410 dbSNP
rs766927586 3410 dbSNP
rs926916580 3413 dbSNP
rs527983003 3414 dbSNP
rs1440274514 3431 dbSNP
rs1356168390 3438 dbSNP
rs1035280259 3441 dbSNP
rs992983145 3445 dbSNP
rs1398570151 3451 dbSNP
rs542599881 3452 dbSNP
rs913096483 3453 dbSNP
rs186164940 3455 dbSNP
rs756119909 3456 dbSNP
rs766335120 3461 dbSNP
rs925880215 3470 dbSNP
rs1016692889 3473 dbSNP
rs1271145154 3474 dbSNP
rs1333910020 3477 dbSNP
rs1210148887 3485 dbSNP
rs962394774 3490 dbSNP
rs1196937175 3492 dbSNP
rs750520607 3496 dbSNP
rs1271737483 3500 dbSNP
rs901162339 3504 dbSNP
rs1335743014 3508 dbSNP
rs570843332 3513 dbSNP
rs1180604203 3516 dbSNP
rs1237008215 3517 dbSNP
rs1251942303 3518 dbSNP
rs998320373 3525 dbSNP
rs1047122314 3535 dbSNP
rs746803734 3538 dbSNP
rs887164210 3542 dbSNP
rs72903181 3558 dbSNP
rs1156486352 3560 dbSNP
rs920911486 3561 dbSNP
rs1416241839 3562 dbSNP
rs1017017453 3564 dbSNP
rs934255448 3566 dbSNP
rs1454223757 3568 dbSNP
rs1251462463 3571 dbSNP
rs191868754 3572 dbSNP
rs1469040539 3578 dbSNP
rs1164256189 3587 dbSNP
rs1203660090 3591 dbSNP
rs1002859132 3597 dbSNP
rs924782017 3598 dbSNP
rs1280218790 3601 dbSNP
rs1034056206 3603 dbSNP
rs934822181 3605 dbSNP
rs1305312367 3606 dbSNP
rs1441326052 3608 dbSNP
rs1325692435 3609 dbSNP
rs1315773759 3615 dbSNP
rs1393298250 3617 dbSNP
rs562803428 3628 dbSNP
rs893203513 3633 dbSNP
rs1172488485 3639 dbSNP
rs1434590891 3641 dbSNP
rs913001599 3649 dbSNP
rs1196096668 3651 dbSNP
rs1454961597 3656 dbSNP
rs1328390266 3658 dbSNP
rs1127683 3659 dbSNP
rs1448972317 3659 dbSNP
rs201453603 3659 dbSNP
rs1044801767 3660 dbSNP
rs967098016 3663 dbSNP
rs535253904 3666 dbSNP
rs1282354710 3670 dbSNP
rs1235004560 3671 dbSNP
rs1003870491 3673 dbSNP
rs1291371885 3675 dbSNP
rs1034938230 3677 dbSNP
rs1432382336 3680 dbSNP
rs532426847 3682 dbSNP
rs1004032787 3686 dbSNP
rs1311701624 3686 dbSNP
rs942668081 3689 dbSNP
rs1376793197 3697 dbSNP
rs1176060277 3699 dbSNP
rs1419185306 3704 dbSNP
rs1476492733 3704 dbSNP
rs555542424 3706 dbSNP
rs1040025123 3708 dbSNP
rs1259783075 3720 dbSNP
rs922656913 3723 dbSNP
rs933998453 3724 dbSNP
rs1270560790 3725 dbSNP
rs1047025930 3740 dbSNP
rs962466985 3744 dbSNP
rs1339878017 3751 dbSNP
rs1292265315 3756 dbSNP
rs1231132457 3759 dbSNP
rs552526299 3761 dbSNP
rs1337154425 3768 dbSNP
rs975137701 3777 dbSNP
rs1449338768 3787 dbSNP
rs1005556583 3797 dbSNP
rs1028409333 3800 dbSNP
rs1327488212 3801 dbSNP
rs1411980232 3808 dbSNP
rs1424863105 3809 dbSNP
rs955033645 3813 dbSNP
rs1274838241 3815 dbSNP
rs1474352775 3815 dbSNP
rs777946263 3816 dbSNP
rs1480245477 3821 dbSNP
rs1231073373 3824 dbSNP
rs747087592 3825 dbSNP
rs770990092 3826 dbSNP
rs777287618 3829 dbSNP
rs1458032517 3839 dbSNP
rs1002481388 3840 dbSNP
rs1231003059 3841 dbSNP
rs1256176351 3843 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084066. RNA binding protein: AGO2. Condition:CLIP_noemetine_SantaCruzAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084066
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noemetine_SantaCruzAb
Location of target site ENST00000409829.3 | 3UTR | UGAAGAGGGAGGACAGAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
Click to see details
Click to see details
138 hsa-miR-412-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT005780 ACVR1C activin A receptor type 1C 1 1
MIRT062013 YOD1 YOD1 deubiquitinase 2 2
MIRT345112 ATXN7L3 ataxin 7 like 3 2 2
MIRT383735 EDEM3 ER degradation enhancing alpha-mannosidase like protein 3 2 2
MIRT396956 CELF1 CUGBP Elav-like family member 1 2 2
MIRT439280 XIAP X-linked inhibitor of apoptosis 1 1
MIRT439313 VAT1 vesicle amine transport 1 1 1
MIRT439375 TUBA1A tubulin alpha 1a 1 1
MIRT439418 TMOD1 tropomodulin 1 1 1
MIRT439503 SURF4 surfeit 4 1 1
MIRT439563 SON SON DNA binding protein 1 1
MIRT439598 SLC3A2 solute carrier family 3 member 2 1 1
MIRT439670 SETD1B SET domain containing 1B 1 1
MIRT439767 RMND5A required for meiotic nuclear division 5 homolog A 1 1
MIRT439922 PPL periplakin 1 1
MIRT439947 PLEKHA6 pleckstrin homology domain containing A6 1 1
MIRT439952 PLCB4 phospholipase C beta 4 1 1
MIRT439961 PKD1 polycystin 1, transient receptor potential channel interacting 1 1
MIRT440005 PEG3 paternally expressed 3 1 1
MIRT440061 OSBPL8 oxysterol binding protein like 8 1 1
MIRT440166 MYH14 myosin heavy chain 14 1 1
MIRT440276 MAPK8IP1 mitogen-activated protein kinase 8 interacting protein 1 1 1
MIRT440437 IPO13 importin 13 1 1
MIRT440441 INTS3 integrator complex subunit 3 1 1
MIRT440448 INS insulin 1 1
MIRT440461 IGF2R insulin like growth factor 2 receptor 1 1
MIRT440472 IARS isoleucyl-tRNA synthetase 1 1
MIRT440530 GUCY1A3 guanylate cyclase 1 soluble subunit alpha 1 1
MIRT440542 GOLGA2 golgin A2 1 1
MIRT440569 GIGYF1 GRB10 interacting GYF protein 1 1 1
MIRT440608 FTSJD2 cap methyltransferase 1 1 1
MIRT440750 EEF1A2 eukaryotic translation elongation factor 1 alpha 2 1 1
MIRT440781 DOT1L DOT1 like histone lysine methyltransferase 1 1
MIRT440804 DNAJA4 DnaJ heat shock protein family (Hsp40) member A4 1 1
MIRT440867 CSDE1 cold shock domain containing E1 1 1
MIRT440890 CPEB4 cytoplasmic polyadenylation element binding protein 4 1 1
MIRT440917 COL1A1 collagen type I alpha 1 chain 1 1
MIRT440967 CDH22 cadherin 22 1 1
MIRT440968 CDH2 cadherin 2 1 1
MIRT441024 CALR calreticulin 1 1
MIRT441278 ACTB actin beta 1 1
MIRT448421 TNFAIP3 TNF alpha induced protein 3 2 2
MIRT462833 BCL3 B-cell CLL/lymphoma 3 2 2
MIRT465062 TSR1 TSR1, ribosome maturation factor 2 2
MIRT476050 GRSF1 G-rich RNA sequence binding factor 1 2 2
MIRT485318 MZT1 mitotic spindle organizing protein 1 2 4
MIRT493584 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 2 6
MIRT494567 BAK1 BCL2 antagonist/killer 1 2 2
MIRT497393 RALY RALY heterogeneous nuclear ribonucleoprotein 2 2
MIRT503250 ZNF257 zinc finger protein 257 2 10
MIRT503656 ZNF138 zinc finger protein 138 2 10
MIRT505882 RNF219 ring finger protein 219 2 2
MIRT507525 DSTN destrin, actin depolymerizing factor 2 4
MIRT510663 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 4
MIRT514682 ZNF701 zinc finger protein 701 2 4
MIRT515370 ZNF208 zinc finger protein 208 2 6
MIRT525237 KCNJ12 potassium voltage-gated channel subfamily J member 12 2 2
MIRT527963 MTAP methylthioadenosine phosphorylase 2 2
MIRT528482 STAMBPL1 STAM binding protein like 1 2 2
MIRT529909 C1orf64 steroid receptor associated and regulated protein 2 4
MIRT531558 SRD5A1 steroid 5 alpha-reductase 1 2 2
MIRT532234 KLF2 Kruppel like factor 2 2 4
MIRT532480 HOXA13 homeobox A13 2 2
MIRT535544 P2RY2 purinergic receptor P2Y2 2 2
MIRT547311 NR1D2 nuclear receptor subfamily 1 group D member 2 2 2
MIRT551795 ZNF117 zinc finger protein 117 2 4
MIRT554939 RAP1A RAP1A, member of RAS oncogene family 2 2
MIRT558171 EIF5A2 eukaryotic translation initiation factor 5A2 2 2
MIRT568771 LY6K lymphocyte antigen 6 family member K 2 2
MIRT570766 ZNF99 zinc finger protein 99 2 2
MIRT572405 MRPS14 mitochondrial ribosomal protein S14 2 2
MIRT573396 DLC1 DLC1 Rho GTPase activating protein 2 2
MIRT610403 RXRB retinoid X receptor beta 2 2
MIRT610886 SCN8A sodium voltage-gated channel alpha subunit 8 2 2
MIRT611197 TMEM105 transmembrane protein 105 2 2
MIRT611244 ZNF550 zinc finger protein 550 2 2
MIRT615669 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 4
MIRT617974 DOCK4 dedicator of cytokinesis 4 2 2
MIRT619150 ZNF326 zinc finger protein 326 2 2
MIRT619608 MKKS McKusick-Kaufman syndrome 2 2
MIRT621053 DGKD diacylglycerol kinase delta 2 2
MIRT623665 HRK harakiri, BCL2 interacting protein 2 2
MIRT624883 AASDHPPT aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase 2 2
MIRT624939 MARCH2 membrane associated ring-CH-type finger 2 2 2
MIRT634198 TMOD2 tropomodulin 2 2 4
MIRT636727 AGO2 argonaute 2, RISC catalytic component 2 2
MIRT637741 POLR3K RNA polymerase III subunit K 2 2
MIRT638002 ZC3H13 zinc finger CCCH-type containing 13 2 2
MIRT640395 ZNF785 zinc finger protein 785 2 2
MIRT640505 ANTXR1 anthrax toxin receptor 1 2 2
MIRT641293 SLAMF1 signaling lymphocytic activation molecule family member 1 2 2
MIRT641863 STOML1 stomatin like 1 2 2
MIRT642600 C14orf180 chromosome 14 open reading frame 180 2 2
MIRT642895 CASP1 caspase 1 2 2
MIRT643967 FHL2 four and a half LIM domains 2 2 4
MIRT645237 KCTD12 potassium channel tetramerization domain containing 12 2 2
MIRT646621 CENPL centromere protein L 2 2
MIRT648620 CYB561A3 cytochrome b561 family member A3 2 2
MIRT648908 ZNF551 zinc finger protein 551 2 2
MIRT649439 HIBADH 3-hydroxyisobutyrate dehydrogenase 2 2
MIRT650637 LTF lactotransferrin 2 2
MIRT650971 STARD3NL STARD3 N-terminal like 2 2
MIRT651067 ZNF518B zinc finger protein 518B 2 4
MIRT652384 TMEM55A phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 2 2
MIRT653958 SEPN1 selenoprotein N 2 2
MIRT656885 KIF1C kinesin family member 1C 2 2
MIRT657965 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT658080 FOXR2 forkhead box R2 2 2
MIRT662570 IL2RA interleukin 2 receptor subunit alpha 2 2
MIRT663089 METTL10 EEF1A lysine methyltransferase 2 2 2
MIRT683705 ZNF195 zinc finger protein 195 2 2
MIRT683835 ZNF682 zinc finger protein 682 2 2
MIRT706811 APOL4 apolipoprotein L4 2 2
MIRT707575 DYNC2LI1 dynein cytoplasmic 2 light intermediate chain 1 2 2
MIRT708606 ZNF260 zinc finger protein 260 2 2
MIRT708859 TMSB4X thymosin beta 4, X-linked 2 2
MIRT709861 PDIK1L PDLIM1 interacting kinase 1 like 2 2
MIRT709987 RBM41 RNA binding motif protein 41 2 2
MIRT710098 KPNA5 karyopherin subunit alpha 5 2 2
MIRT710211 ENAH ENAH, actin regulator 2 2
MIRT710868 B3GALNT1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 2 2
MIRT710986 SUSD5 sushi domain containing 5 2 2
MIRT711460 RNF145 ring finger protein 145 2 2
MIRT712302 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT713609 SYTL4 synaptotagmin like 4 2 2
MIRT713789 MAK16 MAK16 homolog 2 2
MIRT715480 MYO9B myosin IXB 2 2
MIRT716328 POU5F1 POU class 5 homeobox 1 2 2
MIRT717252 TMEM246 transmembrane protein 246 2 2
MIRT718077 CLIC5 chloride intracellular channel 5 2 2
MIRT718463 EED embryonic ectoderm development 2 2
MIRT718645 NKPD1 NTPase KAP family P-loop domain containing 1 2 2
MIRT718982 PIGO phosphatidylinositol glycan anchor biosynthesis class O 2 2
MIRT721078 RPS9 ribosomal protein S9 2 2
MIRT721419 SEC24A SEC24 homolog A, COPII coat complex component 2 2
MIRT721863 CENPJ centromere protein J 2 2
MIRT722492 PNKD paroxysmal nonkinesigenic dyskinesia 2 2
MIRT723391 CALN1 calneuron 1 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-412 Gemcitabine approved 60750 Northern blot Mz-ChA-1 human cholangiocarcinoma cell lines 16762633 2006 down-regulated
miR-412 Progesterone approved 5994 Microarray Breast cancer 22330642 2012 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-412 Androstenedione 6128 NSC9563 sensitive cell line (MCF-7)
hsa-mir-412 Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-412-3p Verapamil 2520 NSC272366 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-412-3p Doxorubicin 31703 NSC123127 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-412-3p Cisplatin 5460033 NSC119875 approved sensitive High Ovarian Cancer cell line (A2780)
hsa-miR-412-3p Oxaliplatin 6857599 NSC266046 approved resistant High Colorectal Cancer cell line (RKO)
hsa-miR-412-3p Oxaliplatin 6857599 NSC266046 approved sensitive High Colorectal Cancer cell line (HCT-116)
hsa-miR-412-3p Cisplatin 5460033 NSC119875 approved sensitive High Ovarian Cancer cell line (A2780)
hsa-miR-412-3p Doxorubicin 31703 NSC123127 approved sensitive High Anaplastic Thyroid Cancer tissue
hsa-miR-412-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM36)
hsa-miR-412-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM47)
hsa-miR-412-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM43)
hsa-miR-412-3p Sunitinib 5329102 NSC750690 approved resistant tissue (CardA)
hsa-miR-412-3p Paclitaxel 36314 NSC125973 approved sensitive cell line (SKOV3)
hsa-miR-412-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-miR-412-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-412-3p Gemcitabine 60750 NSC613327 approved sensitive cell line (Panc1-GR1)
hsa-miR-412-3p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)

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