pre-miRNA Information
pre-miRNA hsa-mir-6769b   
Genomic Coordinates chr1: 206474803 - 206474864
Description Homo sapiens miR-6769b stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6769b-3p
Sequence 42| CCCUCUCUGUCCCACCCAUAG |62
Evidence Experimental
Experiments Meta-analysis
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN26671848 9 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs555627187 3 dbSNP
rs782102173 4 dbSNP
rs201952639 7 dbSNP
rs782001154 9 dbSNP
rs1488064450 15 dbSNP
rs782111367 16 dbSNP
rs370859899 18 dbSNP
rs1305197911 19 dbSNP
Putative Targets

Gene Information
Gene Symbol OXSR1   
Synonyms OSR1
Description oxidative stress responsive 1
Transcript NM_005109   
Expression
Putative miRNA Targets on OXSR1
3'UTR of OXSR1
(miRNA target sites are highlighted)
>OXSR1|NM_005109|3'UTR
   1 ACCACAACCCTGGAAGAGGCGGCCTAAGGAGATTCCACACATGCGTATCTCTGTTGCTTCTATTGGCCTAAACCCACTAC
  81 TGCCAAAGAACCCAGCAACAAACCTCCCGGCTAGGAGCTTTAGAAGTCTTTATGTTCTTCCTGCCATCATTCCTCCTTTT
 161 CCCACAGGGAAAGAAAAGTTGGATCACTAGTGGCCAGCATCCCCAGAGTTCCGTTAGTAAACTTACTTCATATGTCCCCT
 241 GTCTTCCTCCATCTGAGAAGTGGCCCATGTGCTTCAAGGCCCAGGAGGGAGATCTGTCAGCTCATTCTTGCCTTACTCCA
 321 ATGATGGCCCAGGTGGAAAAGTAGCAGCTGTATCGGGCTTCCTCATCCTGCCTGTTCCCCCACACCTGCCAGGATATGGA
 401 CATCTTGGGATATCTCTTTACCACTGAAGTAGAATTGATTGTTCAGCTGGAGCCCAGAGAATTTAATTTAATGTTTTTTC
 481 TTTGTACCTGATGTGAATTCTAGCAACCTTTGTTAGGAAAAAGCACAGCCTCAGATGGAGGCAGCCTAAACTGTGTTCTT
 561 GTTTTGTTCATGGTGTTTCTAAGCGTTTTGCTGAAGCTGCTCTCAGGCACCCCCTTCTTCATTGCTCTCTCCAGAAAGGG
 641 TTGCTAGCCTTAACTTCAGCTGGTGCAAAACATCTGACTGTAGCCGAACTTCAGCCATCAGATCCTTCAAAGTGGAACTT
 721 TGGATTGTTTTTACAGACAACATCGAGTAATGGCTTGTAAATGTGAATTTTGCCAGAGGTGGTTTTTGAACAGGAAAATC
 801 ATAATTCATATCATTGGAGAAGTATTTATTTTCAAATATCAAATTGAAGAAAAACTCAATCCTCCCATGAAAATCAGTTC
 881 GCCTGGCCTCCAAGTCGTGAGGAAATGGGTATGCAAGGCTGAGATTTCTACAGCAATAAAGGAGACACACACTGGGCCAG
 961 AGAGGCCTGCCTTCTGCCTGCTCTCCTGCACTGACCCTTTGGAGGGGGTCTCTGTGTGCTGAAGCTAACTCAAGATGGAA
1041 AGTGAAACCACATGTGCCGTGACCTTTAGGTTTTATGAGTAGACAGTGTTCATTTGATTTTCTACAGAAATAATATAAAT
1121 TATTCTTTAGGTTTAAAAAAGAGCACTCATAATGCAATATGTGAATAATCAGTGAGGTTGATTTTTCTTTTTTCCTACCG
1201 TTTCATAGTCTTTGTCTAACTGCTAGTAACCCTACCGAGTTTTATATATGAGTGGGATACTCAATCTGGCCTTAAAAAGA
1281 TACACAAAGATGGGCTGTGGGTCCCTGGAAAGGGGGAGAGTTGCCCTTTACAGAATCACTCGAGCCCTTTCCAGCACTGT
1361 TGGTCTGATGAACAAGGTTGTTTTACCTTATTTTCTCTTGGAACATATCTGAAAACCTTCCCCACAAATAACTTGTCACA
1441 CCTTTTGTTTCATTCTGAGTCTTTAGTTTTAGTCATGGGCTTTCTTCACCTGCTCTAGGTGCAAAGGCATGTTGGGAAAG
1521 AGATGGATGTTGGGGAGGAAGAGAGGAGATGGATTTCAGTTGGGAGTTAGGAGGAGAGTAGGTGAGATGATCAGACACCG
1601 GAGTTCAACGTCCCAGCAGTCTTGGTAAAAGGAGGGAGCCTGCTGAGCCAGGAGGGAGAAAAGAAGATTGACCAGCTTGC
1681 TAGAAAAATACTTAGCTTTTCTTTTTCTTTTTTTGTGGAGGGGGGACGGAGAGGAACAAGGATGGGGAGGTAGGAATGAG
1761 GTATAGAAAAGAGATAGCATCTTCTTTGGCACAAGACTAGTGGCTTACCGCTTACCTTAGAGTTTTGTTTTTTTTTTTTC
1841 AAACCCATCAAAATCTACTTATTTATGAATCCAAGGGGTGGCAGCATCACTCTGTTCTAGCATTCTTTGTGGAGATGGTC
1921 TGGTGCCTAGCTGGGAGTGAGCAGCAGCCCATCCCCTGTTCACTTTCTCTAGCCCATCATTACCTGTGAACTGCAGTGGG
2001 GCAGTCATGGCAAATAGAATTGGGCTGGGGTTTCTCCTTCTTTTCAGTTCATTGTTTGCCCTGCTAGGAATTAGAAGACA
2081 GACACCATGTCCCAGGACAGTGTTACTTCTTCTGCATGATGTGTGGTAGACTCCCTTTGCTGGCTTGTGCAGTGATACTG
2161 AGAAAATACATGAACAGAAACTGCCCAGGTGGAACAGCACGTAACCTAGTGAGTGACTGTACTCCTTTCTAGGAATGCTG
2241 ATTCAGAGTGCACCTCTTTGACTAGGTCCCAGGATCCCCTTGTCCCTGGAGTAGGGACTAACTATAGCACAAAGTAATAT
2321 GTGCCAATGCTATTTGTGAAATGTTTGGTCTTTCTAAACGACTAAAGGATTTGTTGGGTTTTTGCTTAAGTTTTGAACCA
2401 AATCCTAGAGCCAGCTGATAATATTTAATAATCTGGAGGAGAGAATAATGATGTACCAATAAGTGGAGATTCCTCCTTAT
2481 GATGTATGCTAGGTTATGGAAGATGTAAAATATTCAACTTTTTCCTCCTTTTTTTGGACTTTGTATTTTACTGCATGTTT
2561 TCTTCATTTTTAATCAATAAAGAGTAAATTGTCCTTAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' gauacccACCCUGUCUCUCCc 5'
                 |||| |||||||| 
Target 5' cacacacTGGGCCAGAGAGGc 3'
946 - 966 162.00 -19.70
2
miRNA  3' gauACCCACCCUGUCUCUCCc 5'
             ||||  ||| ||||||| 
Target 5' tgtTGGGGAGGA-AGAGAGGa 3'
1528 - 1547 161.00 -21.40
3
miRNA  3' gaUAC--CCACCCUGUCUCUCCc 5'
            :||  || |||||:|||||| 
Target 5' ttGTGGAGGGGGGACGGAGAGGa 3'
1713 - 1735 157.00 -29.50
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30146961 7 COSMIC
COSN1276659 14 COSMIC
COSN31482731 17 COSMIC
COSN30505078 21 COSMIC
COSN26568393 46 COSMIC
COSN29394369 63 COSMIC
COSN28796129 101 COSMIC
COSN5535729 123 COSMIC
COSN31582112 124 COSMIC
COSN31561319 149 COSMIC
COSN19769253 151 COSMIC
COSN30173282 156 COSMIC
COSN9550214 415 COSMIC
COSN31516720 460 COSMIC
COSN25765972 470 COSMIC
COSN31537269 480 COSMIC
COSN26552561 529 COSMIC
COSN30110491 533 COSMIC
COSN31482960 533 COSMIC
COSN31564527 586 COSMIC
COSN31480681 621 COSMIC
COSN31567555 823 COSMIC
COSN28683980 850 COSMIC
COSN31546610 881 COSMIC
COSN31778306 1342 COSMIC
COSN19341145 1503 COSMIC
COSN17181771 1527 COSMIC
COSN27445052 1840 COSMIC
COSN23201504 1902 COSMIC
COSN31596572 1911 COSMIC
COSN31607370 2018 COSMIC
COSN20090800 2099 COSMIC
COSN1948800 2106 COSMIC
COSN31549018 2120 COSMIC
COSN8489170 2126 COSMIC
COSN30174163 2161 COSMIC
COSN31550764 2321 COSMIC
COSN31480433 2473 COSMIC
COSN31553278 2555 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs779460527 3 dbSNP
rs368493165 4 dbSNP
rs1457731295 10 dbSNP
rs1241183439 11 dbSNP
rs1292134519 12 dbSNP
rs1352906203 15 dbSNP
rs1410951487 17 dbSNP
rs371027986 19 dbSNP
rs780315126 21 dbSNP
rs374272461 22 dbSNP
rs926488539 24 dbSNP
rs773048678 27 dbSNP
rs762911003 29 dbSNP
rs1220638112 37 dbSNP
rs770829518 43 dbSNP
rs1324948384 44 dbSNP
rs372701984 45 dbSNP
rs368455057 46 dbSNP
rs1289036849 48 dbSNP
rs1383764452 48 dbSNP
rs745819968 51 dbSNP
rs771862242 53 dbSNP
rs371503225 54 dbSNP
rs1454645401 61 dbSNP
rs1307362332 63 dbSNP
rs971375478 72 dbSNP
rs920512971 75 dbSNP
rs536564959 76 dbSNP
rs937466053 81 dbSNP
rs1278617065 82 dbSNP
rs553203024 92 dbSNP
rs911536924 94 dbSNP
rs1277168235 100 dbSNP
rs1251933777 105 dbSNP
rs34465576 109 dbSNP
rs147089627 110 dbSNP
rs879220714 114 dbSNP
rs1373294808 133 dbSNP
rs1312017704 138 dbSNP
rs1425866502 144 dbSNP
rs914737289 153 dbSNP
rs1166051851 157 dbSNP
rs1038788341 162 dbSNP
rs1372517943 163 dbSNP
rs1194552895 165 dbSNP
rs900034997 168 dbSNP
rs1409287792 170 dbSNP
rs1443305278 172 dbSNP
rs932803696 179 dbSNP
rs1053924719 187 dbSNP
rs894076082 189 dbSNP
rs1009799427 191 dbSNP
rs1258125660 198 dbSNP
rs1021397919 205 dbSNP
rs946296064 210 dbSNP
rs906522544 212 dbSNP
rs779069270 213 dbSNP
rs1004071741 214 dbSNP
rs1443574788 215 dbSNP
rs1033725417 227 dbSNP
rs1409290630 228 dbSNP
rs890760125 230 dbSNP
rs1171434132 231 dbSNP
rs1415799057 239 dbSNP
rs1187441905 248 dbSNP
rs1473249268 261 dbSNP
rs564093286 268 dbSNP
rs1239515309 269 dbSNP
rs1180176558 276 dbSNP
rs943676261 278 dbSNP
rs1239373734 280 dbSNP
rs748449416 284 dbSNP
rs959412135 291 dbSNP
rs995695787 293 dbSNP
rs973216994 298 dbSNP
rs577689696 317 dbSNP
rs1358101484 319 dbSNP
rs1441262562 322 dbSNP
rs778331071 329 dbSNP
rs983368075 332 dbSNP
rs911575943 337 dbSNP
rs944378679 338 dbSNP
rs1198659644 340 dbSNP
rs1333227974 343 dbSNP
rs1438661213 349 dbSNP
rs974529304 353 dbSNP
rs183838469 355 dbSNP
rs188171498 356 dbSNP
rs1053976906 365 dbSNP
rs970653765 366 dbSNP
rs2298417 373 dbSNP
rs945648303 379 dbSNP
rs1034337375 382 dbSNP
rs1247044975 385 dbSNP
rs549303481 386 dbSNP
rs990657859 391 dbSNP
rs1184741753 393 dbSNP
rs571437968 397 dbSNP
rs1281765609 400 dbSNP
rs967957129 402 dbSNP
rs1363458252 416 dbSNP
rs977649903 422 dbSNP
rs912813784 426 dbSNP
rs1370226713 432 dbSNP
rs34362848 436 dbSNP
rs1437328962 444 dbSNP
rs1351712592 447 dbSNP
rs1033604410 453 dbSNP
rs551521243 455 dbSNP
rs994857195 465 dbSNP
rs1419339535 468 dbSNP
rs1381250819 489 dbSNP
rs1463200877 510 dbSNP
rs1027466582 513 dbSNP
rs774972549 517 dbSNP
rs1191247615 519 dbSNP
rs762646209 520 dbSNP
rs1018860051 531 dbSNP
rs1239890705 533 dbSNP
rs1345000765 536 dbSNP
rs571596191 540 dbSNP
rs1287871653 549 dbSNP
rs886914135 550 dbSNP
rs763709426 554 dbSNP
rs1301952857 557 dbSNP
rs1220907931 562 dbSNP
rs1369739654 568 dbSNP
rs773955494 570 dbSNP
rs906441857 579 dbSNP
rs935761317 585 dbSNP
rs761539516 586 dbSNP
rs989887069 600 dbSNP
rs557363315 606 dbSNP
rs1444243 607 dbSNP
rs1358969610 611 dbSNP
rs915430908 613 dbSNP
rs180736107 614 dbSNP
rs1192370239 615 dbSNP
rs1011626361 618 dbSNP
rs1042914000 622 dbSNP
rs928248308 623 dbSNP
rs371179657 628 dbSNP
rs115133372 631 dbSNP
rs1256374923 634 dbSNP
rs1290098417 640 dbSNP
rs147719146 647 dbSNP
rs1305757365 663 dbSNP
rs967526697 668 dbSNP
rs1218137139 675 dbSNP
rs879111343 680 dbSNP
rs1446238147 682 dbSNP
rs184759246 686 dbSNP
rs1280286134 687 dbSNP
rs1055063932 688 dbSNP
rs536494278 691 dbSNP
rs1413199361 702 dbSNP
rs977972480 705 dbSNP
rs912761816 707 dbSNP
rs965593240 710 dbSNP
rs878887747 711 dbSNP
rs994908247 724 dbSNP
rs1353334590 729 dbSNP
rs1169300410 738 dbSNP
rs1049136710 739 dbSNP
rs1425173661 743 dbSNP
rs536700933 745 dbSNP
rs1488575546 746 dbSNP
rs1256583018 750 dbSNP
rs1183453905 751 dbSNP
rs886309329 754 dbSNP
rs1004722045 755 dbSNP
rs1187388952 757 dbSNP
rs1019159318 758 dbSNP
rs965970832 776 dbSNP
rs1237546823 780 dbSNP
rs1476335140 785 dbSNP
rs1164067998 802 dbSNP
rs1199220933 805 dbSNP
rs1407452557 807 dbSNP
rs996076973 807 dbSNP
rs920893117 810 dbSNP
rs1260078691 817 dbSNP
rs1242806590 838 dbSNP
rs2298418 843 dbSNP
rs1321410099 846 dbSNP
rs1399323218 856 dbSNP
rs1313872670 858 dbSNP
rs1398194915 859 dbSNP
rs868402970 860 dbSNP
rs778755068 865 dbSNP
rs553139812 872 dbSNP
rs1331204443 881 dbSNP
rs12107638 882 dbSNP
rs539297863 883 dbSNP
rs1401771894 887 dbSNP
rs1323378651 891 dbSNP
rs35799757 895 dbSNP
rs780921237 897 dbSNP
rs35716483 898 dbSNP
rs967500956 904 dbSNP
rs752801800 906 dbSNP
rs1179101973 908 dbSNP
rs1459042083 914 dbSNP
rs1240084293 946 dbSNP
rs543550152 948 dbSNP
rs1353055939 953 dbSNP
rs1449522104 956 dbSNP
rs1046202049 959 dbSNP
rs745791708 962 dbSNP
rs35508927 963 dbSNP
rs1221930798 965 dbSNP
rs1351909075 966 dbSNP
rs36086192 970 dbSNP
rs928096385 972 dbSNP
rs747915765 993 dbSNP
rs373502892 996 dbSNP
rs573779710 1005 dbSNP
rs939626958 1013 dbSNP
rs1054973641 1021 dbSNP
rs1354389929 1022 dbSNP
rs1451185281 1025 dbSNP
rs34304095 1028 dbSNP
rs1159087040 1033 dbSNP
rs916613940 1053 dbSNP
rs1486700522 1059 dbSNP
rs1393236880 1060 dbSNP
rs1021650092 1079 dbSNP
rs1188250465 1103 dbSNP
rs1432617125 1104 dbSNP
rs1268183281 1114 dbSNP
rs1232587025 1116 dbSNP
rs559487517 1117 dbSNP
rs751523876 1132 dbSNP
rs528406569 1144 dbSNP
rs1273539462 1147 dbSNP
rs1356445412 1147 dbSNP
rs149355587 1150 dbSNP
rs1019772794 1151 dbSNP
rs886533958 1168 dbSNP
rs1005353225 1176 dbSNP
rs1381276786 1179 dbSNP
rs1302780807 1181 dbSNP
rs1434447200 1182 dbSNP
rs769637280 1189 dbSNP
rs1040231092 1200 dbSNP
rs565151660 1201 dbSNP
rs975629225 1216 dbSNP
rs1324491199 1219 dbSNP
rs190322725 1226 dbSNP
rs1373419029 1227 dbSNP
rs1028573393 1228 dbSNP
rs1466491640 1231 dbSNP
rs1377727140 1235 dbSNP
rs550665248 1237 dbSNP
rs145619504 1238 dbSNP
rs1476946944 1244 dbSNP
rs957237210 1249 dbSNP
rs1194688555 1255 dbSNP
rs1276956529 1265 dbSNP
rs1011251987 1276 dbSNP
rs868797681 1280 dbSNP
rs778171597 1284 dbSNP
rs1257236584 1300 dbSNP
rs1020344492 1305 dbSNP
rs908230814 1309 dbSNP
rs751752719 1312 dbSNP
rs530118850 1313 dbSNP
rs35890394 1319 dbSNP
rs1316898133 1320 dbSNP
rs967169791 1321 dbSNP
rs939737028 1326 dbSNP
rs546906194 1338 dbSNP
rs1311241656 1342 dbSNP
rs757572983 1343 dbSNP
rs1396533792 1346 dbSNP
rs182088221 1352 dbSNP
rs1174368217 1362 dbSNP
rs937837454 1367 dbSNP
rs1054922303 1373 dbSNP
rs960851867 1376 dbSNP
rs1171573564 1383 dbSNP
rs1478934278 1396 dbSNP
rs1278125260 1402 dbSNP
rs538975798 1405 dbSNP
rs1443463121 1406 dbSNP
rs991070302 1416 dbSNP
rs893694813 1423 dbSNP
rs781548974 1424 dbSNP
rs916833100 1425 dbSNP
rs1220027144 1426 dbSNP
rs559163156 1426 dbSNP
rs984821485 1427 dbSNP
rs1043418935 1434 dbSNP
rs1245307788 1435 dbSNP
rs1342066300 1453 dbSNP
rs1329179869 1467 dbSNP
rs903204542 1474 dbSNP
rs1332198866 1475 dbSNP
rs746425341 1478 dbSNP
rs1411861037 1480 dbSNP
rs1411944831 1481 dbSNP
rs1272338920 1482 dbSNP
rs907848499 1488 dbSNP
rs1436339250 1496 dbSNP
rs998903145 1498 dbSNP
rs1457720408 1510 dbSNP
rs1019720368 1524 dbSNP
rs1206918337 1530 dbSNP
rs1238979735 1545 dbSNP
rs901294147 1549 dbSNP
rs1454110522 1550 dbSNP
rs1306828797 1559 dbSNP
rs770267510 1560 dbSNP
rs1377637938 1561 dbSNP
rs1310033898 1563 dbSNP
rs1444513466 1571 dbSNP
rs1397492420 1576 dbSNP
rs1348226333 1579 dbSNP
rs997015880 1580 dbSNP
rs1406177225 1589 dbSNP
rs569669205 1590 dbSNP
rs1157288291 1592 dbSNP
rs1439591056 1593 dbSNP
rs1381530233 1598 dbSNP
rs1028515123 1599 dbSNP
rs537092217 1600 dbSNP
rs1395112194 1601 dbSNP
rs1221777468 1609 dbSNP
rs984403705 1610 dbSNP
rs1283619721 1623 dbSNP
rs1215674685 1631 dbSNP
rs1332960659 1636 dbSNP
rs1400505472 1638 dbSNP
rs1040852260 1640 dbSNP
rs1439974753 1649 dbSNP
rs940943254 1665 dbSNP
rs901717777 1667 dbSNP
rs931807456 1674 dbSNP
rs866122488 1675 dbSNP
rs1347665452 1676 dbSNP
rs927714730 1681 dbSNP
rs937783565 1692 dbSNP
rs1233855565 1693 dbSNP
rs893073733 1698 dbSNP
rs1423842763 1702 dbSNP
rs1011886970 1706 dbSNP
rs1481194248 1708 dbSNP
rs879169508 1708 dbSNP
rs556987632 1716 dbSNP
rs573816910 1721 dbSNP
rs748830548 1722 dbSNP
rs1207862569 1724 dbSNP
rs1334861047 1726 dbSNP
rs1236248263 1727 dbSNP
rs540459817 1728 dbSNP
rs779791826 1729 dbSNP
rs958408541 1737 dbSNP
rs1468192912 1745 dbSNP
rs186733245 1751 dbSNP
rs1341460294 1758 dbSNP
rs1291063508 1765 dbSNP
rs1446460324 1768 dbSNP
rs1041107638 1770 dbSNP
rs1176125791 1771 dbSNP
rs199787905 1772 dbSNP
rs1023730523 1783 dbSNP
rs1169429452 1788 dbSNP
rs773889284 1790 dbSNP
rs35539377 1796 dbSNP
rs149830 1798 dbSNP
rs36014521 1810 dbSNP
rs559139404 1811 dbSNP
rs1482874247 1812 dbSNP
rs1237937493 1813 dbSNP
rs1205517273 1817 dbSNP
rs1462657379 1818 dbSNP
rs1474151129 1823 dbSNP
rs1227010533 1828 dbSNP
rs201681558 1828 dbSNP
rs557569901 1828 dbSNP
rs940685815 1829 dbSNP
rs1303892580 1830 dbSNP
rs1455054371 1831 dbSNP
rs36124466 1832 dbSNP
rs888640823 1833 dbSNP
rs556980002 1840 dbSNP
rs1323704411 1841 dbSNP
rs1392645640 1842 dbSNP
rs2623811 1851 dbSNP
rs1162286463 1862 dbSNP
rs1387097072 1863 dbSNP
rs1015837528 1865 dbSNP
rs1414262111 1872 dbSNP
rs961645637 1876 dbSNP
rs1324555165 1879 dbSNP
rs138763538 1882 dbSNP
rs1198136461 1885 dbSNP
rs1050271284 1886 dbSNP
rs141800606 1889 dbSNP
rs1219682750 1892 dbSNP
rs990601361 1894 dbSNP
rs1313894157 1895 dbSNP
rs947351704 1898 dbSNP
rs1248785733 1913 dbSNP
rs1375414528 1915 dbSNP
rs1307858670 1919 dbSNP
rs915021387 1921 dbSNP
rs1398049861 1924 dbSNP
rs1291363824 1926 dbSNP
rs773047034 1931 dbSNP
rs1457108688 1932 dbSNP
rs530155833 1946 dbSNP
rs1042016673 1948 dbSNP
rs967916254 1954 dbSNP
rs370770366 1957 dbSNP
rs978366814 1959 dbSNP
rs547033780 1963 dbSNP
rs1179200172 1965 dbSNP
rs1204864655 1968 dbSNP
rs1260336348 1970 dbSNP
rs944630182 1980 dbSNP
rs567200133 1981 dbSNP
rs1041054274 1994 dbSNP
rs566959392 2021 dbSNP
rs746835833 2025 dbSNP
rs1195265332 2026 dbSNP
rs532690396 2027 dbSNP
rs902887078 2028 dbSNP
rs562904861 2031 dbSNP
rs1285882396 2037 dbSNP
rs34969268 2037 dbSNP
rs1474567797 2038 dbSNP
rs1336958816 2040 dbSNP
rs181301603 2041 dbSNP
rs1385875023 2042 dbSNP
rs888561440 2045 dbSNP
rs1005716019 2046 dbSNP
rs1037629044 2051 dbSNP
rs1359695494 2054 dbSNP
rs894241760 2055 dbSNP
rs1159104245 2063 dbSNP
rs1455293807 2070 dbSNP
rs1365589603 2078 dbSNP
rs1157769167 2079 dbSNP
rs35385989 2081 dbSNP
rs565876631 2083 dbSNP
rs1012597197 2099 dbSNP
rs1023787936 2100 dbSNP
rs1201903581 2106 dbSNP
rs1382782276 2106 dbSNP
rs1401732817 2108 dbSNP
rs114471798 2109 dbSNP
rs1034623239 2113 dbSNP
rs1253712490 2124 dbSNP
rs567245293 2136 dbSNP
rs1323657848 2148 dbSNP
rs1284758295 2154 dbSNP
rs1412966816 2154 dbSNP
rs1012377960 2158 dbSNP
rs1015595662 2159 dbSNP
rs1339533712 2162 dbSNP
rs1022038391 2164 dbSNP
rs968243534 2169 dbSNP
rs868064704 2171 dbSNP
rs542262807 2173 dbSNP
rs560644376 2180 dbSNP
rs1356532241 2188 dbSNP
rs923245652 2190 dbSNP
rs965923813 2193 dbSNP
rs1178784041 2196 dbSNP
rs953468480 2201 dbSNP
rs146256440 2202 dbSNP
rs1485061724 2209 dbSNP
rs1194398010 2218 dbSNP
rs922559122 2223 dbSNP
rs932660588 2225 dbSNP
rs986198908 2242 dbSNP
rs1254635501 2252 dbSNP
rs1050227425 2253 dbSNP
rs1461322334 2257 dbSNP
rs1264470855 2263 dbSNP
rs1257905461 2291 dbSNP
rs909949476 2295 dbSNP
rs941470654 2305 dbSNP
rs572956694 2312 dbSNP
rs1338509607 2313 dbSNP
rs914442808 2315 dbSNP
rs1333384001 2317 dbSNP
rs947204468 2328 dbSNP
rs761157727 2337 dbSNP
rs528225901 2338 dbSNP
rs1056652357 2340 dbSNP
rs1399907812 2344 dbSNP
rs73827649 2360 dbSNP
rs1367088503 2378 dbSNP
rs1187381912 2386 dbSNP
rs1056742947 2397 dbSNP
rs1244437867 2398 dbSNP
rs558313807 2399 dbSNP
rs894132174 2403 dbSNP
rs1304659717 2406 dbSNP
rs1457021753 2412 dbSNP
rs1380222026 2416 dbSNP
rs1273209092 2418 dbSNP
rs575187813 2419 dbSNP
rs1012654719 2425 dbSNP
rs1353924697 2429 dbSNP
rs1283441885 2435 dbSNP
rs2011 2436 dbSNP
rs560959863 2447 dbSNP
rs999695451 2458 dbSNP
rs759115688 2459 dbSNP
rs781464170 2460 dbSNP
rs1444597455 2469 dbSNP
rs1335284536 2474 dbSNP
rs1241245223 2475 dbSNP
rs76267410 2480 dbSNP
rs1006810096 2481 dbSNP
rs750772547 2482 dbSNP
rs1303331295 2487 dbSNP
rs1389004532 2492 dbSNP
rs1163415201 2496 dbSNP
rs1015066795 2498 dbSNP
rs756435671 2500 dbSNP
rs141700131 2502 dbSNP
rs997752206 2507 dbSNP
rs1483400477 2514 dbSNP
rs772919376 2516 dbSNP
rs1030363736 2522 dbSNP
rs965871614 2528 dbSNP
rs1194892476 2531 dbSNP
rs878918362 2533 dbSNP
rs1235933113 2537 dbSNP
rs189918848 2538 dbSNP
rs1361361317 2543 dbSNP
rs1178954477 2545 dbSNP
rs1028910086 2547 dbSNP
rs953441723 2555 dbSNP
rs1178389780 2593 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084066. RNA binding protein: AGO2. Condition:CLIP_noemetine_SantaCruzAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gauACCCACCCUGUCUCUCCc 5'
             ||||  ||| ||||||| 
Target 5' uguUGGGGAGGA-AGAGAGGa 3'
13 - 32
2
miRNA  3' gauacccaccCUGUCUCUccc 5'
                    || |||||   
Target 5' ----------GAAAGAGAugg 3'
1 - 11
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084066
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noemetine_SantaCruzAb
Location of target site ENST00000311806.3 | 3UTR | GAAAGAGAUGGAUGUUGGGGAGGAAGAGAGGAGAUGGAUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
209 hsa-miR-6769b-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT181753 UHMK1 U2AF homology motif kinase 1 2 2
MIRT287119 SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 2 2
MIRT395372 CDC42EP4 CDC42 effector protein 4 2 4
MIRT472533 NACC1 nucleus accumbens associated 1 2 4
MIRT472611 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 2 2
MIRT482405 ADRB1 adrenoceptor beta 1 2 10
MIRT492330 SETD1B SET domain containing 1B 2 2
MIRT499238 VAV3 vav guanine nucleotide exchange factor 3 2 6
MIRT512274 ARHGDIA Rho GDP dissociation inhibitor alpha 2 6
MIRT534548 RUNX1 runt related transcription factor 1 2 2
MIRT535374 PEX5L peroxisomal biogenesis factor 5 like 2 2
MIRT535424 PDZD8 PDZ domain containing 8 2 2
MIRT539329 AHSA2 activator of HSP90 ATPase homolog 2 2 4
MIRT569350 EFHC1 EF-hand domain containing 1 2 2
MIRT576116 Klf6 Kruppel-like factor 6 2 2
MIRT607241 LINS lines homolog 1 2 4
MIRT607364 ASAH2 N-acylsphingosine amidohydrolase 2 2 4
MIRT609572 CATSPER4 cation channel sperm associated 4 2 2
MIRT610045 SERPINA3 serpin family A member 3 2 2
MIRT610284 PLCXD3 phosphatidylinositol specific phospholipase C X domain containing 3 2 2
MIRT610302 KLHL21 kelch like family member 21 2 2
MIRT610393 FOXE1 forkhead box E1 2 2
MIRT610432 ASAH2B N-acylsphingosine amidohydrolase 2B 2 2
MIRT610510 BARHL2 BarH like homeobox 2 2 2
MIRT611818 FCRL4 Fc receptor like 4 2 2
MIRT612755 MYOCD myocardin 2 2
MIRT613698 QPRT quinolinate phosphoribosyltransferase 2 2
MIRT613917 POU3F1 POU class 3 homeobox 1 2 2
MIRT615153 URGCP-MRPS24 URGCP-MRPS24 readthrough 2 2
MIRT615201 CLUAP1 clusterin associated protein 1 2 2
MIRT615338 ABCC12 ATP binding cassette subfamily C member 12 2 2
MIRT616706 UBXN2A UBX domain protein 2A 2 2
MIRT617186 GOSR2 golgi SNAP receptor complex member 2 2 4
MIRT617526 SORCS2 sortilin related VPS10 domain containing receptor 2 2 2
MIRT617596 NUDT5 nudix hydrolase 5 2 4
MIRT617763 C17orf105 chromosome 17 open reading frame 105 2 2
MIRT618613 SHOX short stature homeobox 2 2
MIRT619301 FAM26E calcium homeostasis modulator family member 5 2 2
MIRT619515 TXLNB taxilin beta 2 2
MIRT619925 NLRP9 NLR family pyrin domain containing 9 2 2
MIRT619942 C8orf33 chromosome 8 open reading frame 33 2 2
MIRT620025 NFAM1 NFAT activating protein with ITAM motif 1 2 2
MIRT620554 C10orf10 chromosome 10 open reading frame 10 2 4
MIRT620752 CCR5 C-C motif chemokine receptor 5 (gene/pseudogene) 2 2
MIRT621798 TMEM233 transmembrane protein 233 2 2
MIRT621843 TGFBR3 transforming growth factor beta receptor 3 2 2
MIRT622693 PLSCR1 phospholipid scramblase 1 2 2
MIRT622733 PITPNM3 PITPNM family member 3 2 2
MIRT623004 ONECUT3 one cut homeobox 3 2 2
MIRT623211 MTFR1L mitochondrial fission regulator 1 like 2 2
MIRT623771 GPR37L1 G protein-coupled receptor 37 like 1 2 2
MIRT624119 DNAH10OS dynein axonemal heavy chain 10 opposite strand 2 2
MIRT624150 DIAPH1 diaphanous related formin 1 2 2
MIRT624443 CAMK2N1 calcium/calmodulin dependent protein kinase II inhibitor 1 2 2
MIRT624855 ABI2 abl interactor 2 2 2
MIRT625311 SHISA6 shisa family member 6 2 2
MIRT625741 MTSS1 MTSS1, I-BAR domain containing 2 2
MIRT626292 ZNF85 zinc finger protein 85 2 2
MIRT627400 TMEM170A transmembrane protein 170A 2 2
MIRT627464 SYNRG synergin gamma 2 2
MIRT627913 KANSL1 KAT8 regulatory NSL complex subunit 1 2 2
MIRT636508 GDAP1L1 ganglioside induced differentiation associated protein 1 like 1 2 2
MIRT636910 KIAA0408 KIAA0408 2 2
MIRT637302 ACTN2 actinin alpha 2 2 2
MIRT638230 SOGA3 SOGA family member 3 2 2
MIRT639880 STC1 stanniocalcin 1 2 2
MIRT639999 PHF21B PHD finger protein 21B 2 2
MIRT640149 CEP104 centrosomal protein 104 2 2
MIRT640699 SKI SKI proto-oncogene 2 2
MIRT640911 RAB13 RAB13, member RAS oncogene family 2 2
MIRT641518 CREBBP CREB binding protein 2 2
MIRT641990 OXSR1 oxidative stress responsive 1 2 2
MIRT642635 EPPIN epididymal peptidase inhibitor 2 2
MIRT642744 TDRD6 tudor domain containing 6 2 2
MIRT642759 SDHAF2 succinate dehydrogenase complex assembly factor 2 2 2
MIRT642787 CHCHD3 coiled-coil-helix-coiled-coil-helix domain containing 3 2 2
MIRT643054 EPPIN-WFDC6 EPPIN-WFDC6 readthrough 2 2
MIRT643104 NDUFB5 NADH:ubiquinone oxidoreductase subunit B5 2 2
MIRT643316 TMEM151B transmembrane protein 151B 2 2
MIRT643715 ITK IL2 inducible T-cell kinase 2 2
MIRT644087 A4GALT alpha 1,4-galactosyltransferase (P blood group) 2 2
MIRT644112 SEL1L3 SEL1L family member 3 2 2
MIRT644377 ZNF286A zinc finger protein 286A 2 2
MIRT644408 FRMD6 FERM domain containing 6 2 2
MIRT644684 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT644744 CCDC174 coiled-coil domain containing 174 2 2
MIRT644876 C2orf48 chromosome 2 open reading frame 48 2 2
MIRT645417 FAM110A family with sequence similarity 110 member A 2 2
MIRT645928 PLXNA3 plexin A3 2 2
MIRT646181 PTPN14 protein tyrosine phosphatase, non-receptor type 14 2 2
MIRT646554 TMCC2 transmembrane and coiled-coil domain family 2 2 2
MIRT647235 OR6A2 olfactory receptor family 6 subfamily A member 2 2 2
MIRT647263 PTGDR2 prostaglandin D2 receptor 2 2 2
MIRT647660 FOXL1 forkhead box L1 2 2
MIRT648284 TRAPPC2L trafficking protein particle complex 2 like 2 2
MIRT648493 CMBL carboxymethylenebutenolidase homolog 2 2
MIRT648963 TMEM45B transmembrane protein 45B 2 2
MIRT649511 RAB17 RAB17, member RAS oncogene family 2 2
MIRT650446 CPXM2 carboxypeptidase X, M14 family member 2 2 2
MIRT650712 KRT32 keratin 32 2 2
MIRT651069 ZNF518B zinc finger protein 518B 2 4
MIRT651090 ZNF516 zinc finger protein 516 2 2
MIRT651193 ZNF281 zinc finger protein 281 2 2
MIRT651330 ZCCHC2 zinc finger CCHC-type containing 2 2 2
MIRT651445 XKR4 XK related 4 2 2
MIRT651517 WNT4 Wnt family member 4 2 4
MIRT651694 VPS13D vacuolar protein sorting 13 homolog D 2 2
MIRT652173 TRIM66 tripartite motif containing 66 2 2
MIRT652432 TMEM239 transmembrane protein 239 2 2
MIRT652656 TIMM10 translocase of inner mitochondrial membrane 10 2 2
MIRT652707 THBS2 thrombospondin 2 2 2
MIRT652812 TBL2 transducin beta like 2 2 2
MIRT653350 SMG7 SMG7, nonsense mediated mRNA decay factor 2 2
MIRT653471 SLC4A1 solute carrier family 4 member 1 (Diego blood group) 2 2
MIRT653658 SLC27A4 solute carrier family 27 member 4 2 2
MIRT654691 PSMB5 proteasome subunit beta 5 2 2
MIRT654735 PRLR prolactin receptor 2 2
MIRT654931 POLR3D RNA polymerase III subunit D 2 2
MIRT655209 PHAX phosphorylated adaptor for RNA export 2 2
MIRT655346 PCP4L1 Purkinje cell protein 4 like 1 2 2
MIRT655404 PANK1 pantothenate kinase 1 2 2
MIRT655482 PAK3 p21 (RAC1) activated kinase 3 2 2
MIRT655964 NDNF neuron derived neurotrophic factor 2 2
MIRT656017 MYPN myopalladin 2 2
MIRT656491 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 2
MIRT657151 ITGA1 integrin subunit alpha 1 2 2
MIRT657411 HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 2 2
MIRT657608 GRID1 glutamate ionotropic receptor delta type subunit 1 2 2
MIRT658181 FBXO9 F-box protein 9 2 2
MIRT658932 DPY19L1 dpy-19 like C-mannosyltransferase 1 2 2
MIRT659028 DHTKD1 dehydrogenase E1 and transketolase domain containing 1 2 2
MIRT659092 DENR density regulated re-initiation and release factor 2 2
MIRT659204 CYBB cytochrome b-245 beta chain 2 2
MIRT659718 CCDC93 coiled-coil domain containing 93 2 2
MIRT660185 BNC2 basonuclin 2 2 2
MIRT660805 AIFM2 apoptosis inducing factor, mitochondria associated 2 2 2
MIRT660900 ADCY6 adenylate cyclase 6 2 2
MIRT660925 ADAM19 ADAM metallopeptidase domain 19 2 2
MIRT661741 DTHD1 death domain containing 1 2 2
MIRT661998 EFTUD2 elongation factor Tu GTP binding domain containing 2 2 2
MIRT662639 PKHD1L1 PKHD1 like 1 2 2
MIRT664338 RAB8A RAB8A, member RAS oncogene family 2 2
MIRT666743 RALY RALY heterogeneous nuclear ribonucleoprotein 2 2
MIRT667070 PANK3 pantothenate kinase 3 2 2
MIRT667925 IGLON5 IgLON family member 5 2 2
MIRT668488 ETV3 ETS variant 3 2 2
MIRT668610 EHD4 EH domain containing 4 2 2
MIRT669419 ATP9A ATPase phospholipid transporting 9A (putative) 2 2
MIRT669652 ACSBG1 acyl-CoA synthetase bubblegum family member 1 2 2
MIRT674005 KCNN3 potassium calcium-activated channel subfamily N member 3 2 2
MIRT680447 SLCO5A1 solute carrier organic anion transporter family member 5A1 2 2
MIRT684326 GTF3C4 general transcription factor IIIC subunit 4 2 2
MIRT685625 C12orf49 chromosome 12 open reading frame 49 2 2
MIRT689978 ZNF185 zinc finger protein 185 with LIM domain 2 2
MIRT693962 HNRNPA1L2 heterogeneous nuclear ribonucleoprotein A1-like 2 2 2
MIRT698543 TFRC transferrin receptor 2 2
MIRT699982 RREB1 ras responsive element binding protein 1 2 2
MIRT702898 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 2 2
MIRT707383 VCAM1 vascular cell adhesion molecule 1 2 2
MIRT708312 CDH8 cadherin 8 2 2
MIRT708406 GRIN2A glutamate ionotropic receptor NMDA type subunit 2A 2 2
MIRT709299 LDLRAD4 low density lipoprotein receptor class A domain containing 4 2 2
MIRT710326 STK40 serine/threonine kinase 40 2 2
MIRT710729 C19orf68 zinc finger SWIM-type containing 9 2 2
MIRT710970 CMKLR1 chemerin chemokine-like receptor 1 2 2
MIRT711178 EMCN endomucin 2 2
MIRT711590 SETD1A SET domain containing 1A 2 2
MIRT711611 LHX5 LIM homeobox 5 2 2
MIRT711701 GMPR guanosine monophosphate reductase 2 2
MIRT711850 AMOTL2 angiomotin like 2 2 2
MIRT712358 NAT14 N-acetyltransferase 14 (putative) 2 2
MIRT712377 MTPN myotrophin 2 2
MIRT712469 KCNC3 potassium voltage-gated channel subfamily C member 3 2 2
MIRT712839 RHOA ras homolog family member A 2 2
MIRT713592 ANKMY1 ankyrin repeat and MYND domain containing 1 2 2
MIRT713982 ASIC4 acid sensing ion channel subunit family member 4 2 2
MIRT714534 ZBTB39 zinc finger and BTB domain containing 39 2 2
MIRT714570 GALNT10 polypeptide N-acetylgalactosaminyltransferase 10 2 2
MIRT714610 EXO5 exonuclease 5 2 2
MIRT714943 ZNF330 zinc finger protein 330 2 2
MIRT715132 ACADL acyl-CoA dehydrogenase, long chain 2 2
MIRT716018 TMPRSS5 transmembrane protease, serine 5 2 2
MIRT716204 TYW3 tRNA-yW synthesizing protein 3 homolog 2 2
MIRT716674 PPP6R1 protein phosphatase 6 regulatory subunit 1 2 2
MIRT717366 EDN2 endothelin 2 2 2
MIRT718110 CRTC1 CREB regulated transcription coactivator 1 2 2
MIRT718502 GYS1 glycogen synthase 1 2 2
MIRT719146 DPYSL5 dihydropyrimidinase like 5 2 2
MIRT719415 B4GALNT3 beta-1,4-N-acetyl-galactosaminyltransferase 3 2 2
MIRT719986 MAPK1 mitogen-activated protein kinase 1 2 2
MIRT720347 BACE2 beta-site APP-cleaving enzyme 2 2 2
MIRT720452 SLC16A5 solute carrier family 16 member 5 2 2
MIRT720493 TMEM178B transmembrane protein 178B 2 2
MIRT720666 C11orf54 chromosome 11 open reading frame 54 2 2
MIRT721091 CCBE1 collagen and calcium binding EGF domains 1 2 2
MIRT721334 IFNAR2 interferon alpha and beta receptor subunit 2 2 2
MIRT721384 MACC1 MACC1, MET transcriptional regulator 2 2
MIRT721508 CARHSP1 calcium regulated heat stable protein 1 2 2
MIRT721827 POU6F1 POU class 6 homeobox 1 2 2
MIRT722136 TTLL11 tubulin tyrosine ligase like 11 2 2
MIRT723070 GGA1 golgi associated, gamma adaptin ear containing, ARF binding protein 1 2 2
MIRT723115 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT723374 ZNF470 zinc finger protein 470 2 2
MIRT724446 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT724528 ATP2B1 ATPase plasma membrane Ca2+ transporting 1 2 2
MIRT724643 PKDREJ polycystin family receptor for egg jelly 2 2
MIRT724711 CRAMP1L cramped chromatin regulator homolog 1 2 2
MIRT724750 ZNF391 zinc finger protein 391 2 2
MIRT724770 PSG4 pregnancy specific beta-1-glycoprotein 4 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-6769b Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-mir-6769b Docetaxel+Cisplatin+5-Fluorouracil sensitive tissue (hypopharyngeal squamous cell carcinoma)
hsa-miR-6769b-3p Osimertinib 71496458 NSC779217 approved sensitive cell line (PC9)
hsa-miR-6769b-3p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-6769b-3p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)

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