pre-miRNA Information
pre-miRNA hsa-mir-3622b   
Genomic Coordinates chr8: 27701673 - 27701767
Description Homo sapiens miR-3622b stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3622b-3p
Sequence 58| UCACCUGAGCUCCCGUGCCUG |78
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1232922758 2 dbSNP
rs530939348 5 dbSNP
rs1439657384 10 dbSNP
rs1157333896 12 dbSNP
rs66683138 14 dbSNP
rs1044808718 15 dbSNP
rs946438979 19 dbSNP
rs551845360 21 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol C14orf180   
Synonyms C14orf77, NRAC
Description chromosome 14 open reading frame 180
Transcript NM_001008404   
Expression
Putative miRNA Targets on C14orf180
3'UTR of C14orf180
(miRNA target sites are highlighted)
>C14orf180|NM_001008404|3'UTR
   1 CGGGCAGGACGGGCAGGACGGGCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGCCTGAGCCCTGGC
  81 CCTGCTGCTTGGTGAATCATGGGGGCCAAAAGGGGCTGCTGCCTGAGGGCTAACTAGGAAAAGGGGGACCCCGTGGCGTG
 161 AGATCGGACATGGGGGGCACAGCAGGCGGCCCCGCCACACTAGTCAGCACAGCCCTCCTGTCTCCTGTGTTGGGTCCATG
 241 TGAGATTTTATTAGAAAGAGGATTCGACTGCTAACAGTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCGTCCCA
 321 GCAGGAACTCCTGCTGCTGCTAGGGCCTGGCCCGGCCATCACCGTGTGCACCCTCTTGAGGAGGGGGACACACTGCCCGT
 401 GTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATCCAGACCTCGAAACCCCAC
 481 GGGGAGGGAAGGGTCTGGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCTGAGCCCAGGTCTGACCCCCCTA
 561 CCCAGCCCCGTGAGTCTGGAGAGGCCCCAGGGAAGGACCCCTCATCAGGGGCGGCTTCAGGTGTAGAAGCCGAGGGGACA
 641 GCAAGGGGCCCAGACACCCCCGACCTTCAGAACAGCCATCTGTGCCCAGCTCTGCAGGCCAGGCACACCCAGCTGAGCCC
 721 GGGGCCAGCCAGCACCACCCACCAGCTGGGGCCTGTGGGTCCCGGAGACCGTCTGTGGTTGTGGCTTTGTCGCCGGATTG
 801 CAGAGCTGAAGGGAGCCCTGTGGATGACAAACACCAGGGGCCTCTCCAGACCCTACGTGGGGGGAGGGCTGAACAAAGCA
 881 GGGAGGCCCACGGTTAGACACCAGGCAGAACTGCCCAGGAGAGACACAGGGACAATCAGACCAGCGTCCTCGAGGTTAGC
 961 CTGAGGCGGGTGGGCACGGCCGACCATCCACCCGGTGGTTCCTGTTTGTCCCACCACTTAACTGGGAGACACTGTTTTAT
1041 TAAAACACACCGTGGCTTCCTTCAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' guccGUGCCC-UCG-AGUCCACu 5'
              || ||| :|| ||||||| 
Target 5' tcatCAGGGGCGGCTTCAGGTGt 3'
602 - 624 157.00 -26.00
2
miRNA  3' guCCGUGCCCUCGAG-UCCACu 5'
            ||: :||  | || ||||| 
Target 5' agGGTCTGGTTG-TCAAGGTGg 3'
490 - 510 118.00 -17.10
3
miRNA  3' guccgugccCUCGAGUCCAcu 5'
                   |||| |||||  
Target 5' ccatcctctGAGCCCAGGTct 3'
530 - 550 108.00 -11.10
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN17076817 5 COSMIC
COSN17076818 8 COSMIC
COSN17076819 19 COSMIC
COSN17076820 22 COSMIC
COSN31967249 27 COSMIC
COSN26121450 114 COSMIC
COSN30620221 159 COSMIC
COSN28876956 166 COSMIC
COSN28842942 172 COSMIC
COSN20111748 178 COSMIC
COSN22314366 199 COSMIC
COSN30543412 346 COSMIC
COSN7429702 429 COSMIC
COSN31542852 442 COSMIC
COSN8588014 454 COSMIC
COSN16077939 471 COSMIC
COSN24436281 520 COSMIC
COSN30544729 531 COSMIC
COSN20111750 559 COSMIC
COSN31515236 619 COSMIC
COSN28670948 825 COSMIC
COSN28673226 840 COSMIC
COSN14485366 1369 COSMIC
COSN5206600 1424 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs745869373 1 dbSNP
rs754054962 2 dbSNP
rs1163007586 3 dbSNP
rs758260817 7 dbSNP
rs1379806982 10 dbSNP
rs945338920 11 dbSNP
rs1044020819 12 dbSNP
rs1352495589 15 dbSNP
rs1458537900 15 dbSNP
rs1328502673 16 dbSNP
rs1052404047 19 dbSNP
rs1216839890 19 dbSNP
rs1398668925 19 dbSNP
rs868208487 19 dbSNP
rs925004217 20 dbSNP
rs943024952 21 dbSNP
rs1187294557 24 dbSNP
rs1238553949 28 dbSNP
rs1474092776 29 dbSNP
rs1038678100 38 dbSNP
rs535962711 39 dbSNP
rs1053102782 46 dbSNP
rs1317478150 48 dbSNP
rs78070047 52 dbSNP
rs186046463 53 dbSNP
rs1432556877 55 dbSNP
rs1333336738 57 dbSNP
rs1359656541 60 dbSNP
rs563437480 61 dbSNP
rs544719196 62 dbSNP
rs1423500930 64 dbSNP
rs1375458230 70 dbSNP
rs1165103981 71 dbSNP
rs1017601924 72 dbSNP
rs1240262490 79 dbSNP
rs962955672 80 dbSNP
rs747570680 84 dbSNP
rs1200229475 86 dbSNP
rs1279844615 98 dbSNP
rs1023489210 104 dbSNP
rs1202986331 105 dbSNP
rs1233298131 113 dbSNP
rs1175205864 114 dbSNP
rs1471031118 116 dbSNP
rs1238124241 127 dbSNP
rs1440333009 135 dbSNP
rs564798090 139 dbSNP
rs1393491682 140 dbSNP
rs1274508041 142 dbSNP
rs746638160 147 dbSNP
rs750764905 148 dbSNP
rs879279565 150 dbSNP
rs969220999 151 dbSNP
rs1001994379 153 dbSNP
rs1002169519 154 dbSNP
rs1460475107 157 dbSNP
rs578206651 158 dbSNP
rs1034855735 159 dbSNP
rs1033612777 163 dbSNP
rs982692164 166 dbSNP
rs1338428596 171 dbSNP
rs576777677 171 dbSNP
rs1405191447 172 dbSNP
rs3840008 172 dbSNP
rs796916368 172 dbSNP
rs1344296767 175 dbSNP
rs549018174 176 dbSNP
rs879126429 177 dbSNP
rs973818149 179 dbSNP
rs1408415336 181 dbSNP
rs913766568 184 dbSNP
rs11160811 185 dbSNP
rs1200306302 186 dbSNP
rs979410264 187 dbSNP
rs1240625576 188 dbSNP
rs1218189823 189 dbSNP
rs188900899 192 dbSNP
rs766986068 194 dbSNP
rs534480607 195 dbSNP
rs1326201302 200 dbSNP
rs1256906652 201 dbSNP
rs1223664565 204 dbSNP
rs974417933 210 dbSNP
rs181385441 211 dbSNP
rs374439354 212 dbSNP
rs933080706 213 dbSNP
rs142719723 232 dbSNP
rs887322829 237 dbSNP
rs3803318 240 dbSNP
rs528480531 241 dbSNP
rs1431445890 245 dbSNP
rs1421851005 247 dbSNP
rs893114958 253 dbSNP
rs1428049704 259 dbSNP
rs1012006380 261 dbSNP
rs1188534496 262 dbSNP
rs551533382 264 dbSNP
rs905952002 267 dbSNP
rs571192250 271 dbSNP
rs1178419681 275 dbSNP
rs1357356204 279 dbSNP
rs116265213 302 dbSNP
rs1033666690 315 dbSNP
rs896479916 316 dbSNP
rs1013656150 319 dbSNP
rs1021453334 345 dbSNP
rs1363686203 349 dbSNP
rs966778951 352 dbSNP
rs960551756 354 dbSNP
rs571498829 355 dbSNP
rs1337341016 357 dbSNP
rs1015938596 363 dbSNP
rs962371370 364 dbSNP
rs371881395 365 dbSNP
rs1323545627 372 dbSNP
rs1032146581 376 dbSNP
rs974150401 379 dbSNP
rs964641905 381 dbSNP
rs1446873008 382 dbSNP
rs536961864 384 dbSNP
rs1244077515 386 dbSNP
rs953769179 392 dbSNP
rs1225888875 394 dbSNP
rs550331561 399 dbSNP
rs922960787 400 dbSNP
rs1217011997 408 dbSNP
rs1244157048 411 dbSNP
rs934836307 417 dbSNP
rs375633438 418 dbSNP
rs1269704515 421 dbSNP
rs1390758685 431 dbSNP
rs1371164536 432 dbSNP
rs947701146 433 dbSNP
rs932970995 442 dbSNP
rs983100203 443 dbSNP
rs1161927635 444 dbSNP
rs878896201 454 dbSNP
rs1413806806 456 dbSNP
rs950888342 460 dbSNP
rs907625767 463 dbSNP
rs1386262604 468 dbSNP
rs1181614960 471 dbSNP
rs567124538 472 dbSNP
rs535901365 481 dbSNP
rs1038962454 482 dbSNP
rs1297122108 491 dbSNP
rs186265404 494 dbSNP
rs1024797780 495 dbSNP
rs898405366 497 dbSNP
rs995471382 506 dbSNP
rs938297491 507 dbSNP
rs1272543798 508 dbSNP
rs1431298798 510 dbSNP
rs1314876710 512 dbSNP
rs1367560549 513 dbSNP
rs1391846817 520 dbSNP
rs1345001351 521 dbSNP
rs1055297937 530 dbSNP
rs896528665 533 dbSNP
rs1286801857 545 dbSNP
rs1452149226 553 dbSNP
rs3840007 553 dbSNP
rs1160516541 554 dbSNP
rs191863595 562 dbSNP
rs1428000068 569 dbSNP
rs558475065 570 dbSNP
rs902608896 571 dbSNP
rs1267659097 598 dbSNP
rs576847577 599 dbSNP
rs879168622 600 dbSNP
rs1484783308 610 dbSNP
rs1196897188 613 dbSNP
rs368002095 614 dbSNP
rs1322809029 618 dbSNP
rs1032612690 624 dbSNP
rs964526945 630 dbSNP
rs989389660 632 dbSNP
rs914779196 633 dbSNP
rs576336894 636 dbSNP
rs1387595935 641 dbSNP
rs1030257350 646 dbSNP
rs1289763161 656 dbSNP
rs980401031 658 dbSNP
rs954577450 662 dbSNP
rs1157809855 663 dbSNP
rs983536685 667 dbSNP
rs74088184 670 dbSNP
rs563826752 675 dbSNP
rs574294985 680 dbSNP
rs963483667 682 dbSNP
rs1426298881 685 dbSNP
rs1263392927 694 dbSNP
rs1209195662 699 dbSNP
rs1460679863 703 dbSNP
rs1261231975 719 dbSNP
rs543286131 721 dbSNP
rs559795066 722 dbSNP
rs1225530024 726 dbSNP
rs1328484657 744 dbSNP
rs1298607204 746 dbSNP
rs890528289 753 dbSNP
rs920130546 755 dbSNP
rs1404338275 756 dbSNP
rs938176245 764 dbSNP
rs767483945 765 dbSNP
rs1460021323 768 dbSNP
rs1037265699 769 dbSNP
rs918175135 771 dbSNP
rs866486348 772 dbSNP
rs1240992647 773 dbSNP
rs80252681 778 dbSNP
rs1028264273 779 dbSNP
rs1316131872 780 dbSNP
rs1272192571 784 dbSNP
rs534760758 793 dbSNP
rs551739742 795 dbSNP
rs1001386206 796 dbSNP
rs1381085005 807 dbSNP
rs1289258919 812 dbSNP
rs1438400168 817 dbSNP
rs1053863502 818 dbSNP
rs1449413048 819 dbSNP
rs10083486 825 dbSNP
rs1327400093 828 dbSNP
rs1240005844 829 dbSNP
rs1437720401 835 dbSNP
rs10083489 840 dbSNP
rs74088198 841 dbSNP
rs954629825 855 dbSNP
rs1004785943 856 dbSNP
rs200679665 857 dbSNP
rs1473003831 858 dbSNP
rs963070391 858 dbSNP
rs536034750 860 dbSNP
rs1252581328 867 dbSNP
rs1222032596 880 dbSNP
rs1424677898 882 dbSNP
rs1294201996 892 dbSNP
rs111289865 893 dbSNP
rs958413297 900 dbSNP
rs1398793308 914 dbSNP
rs757576164 915 dbSNP
rs147351225 918 dbSNP
rs1351801644 920 dbSNP
rs1308050985 921 dbSNP
rs1403782341 930 dbSNP
rs1363407076 932 dbSNP
rs73361831 935 dbSNP
rs949691764 942 dbSNP
rs1385363318 945 dbSNP
rs1405794042 945 dbSNP
rs1242884921 946 dbSNP
rs1042631412 947 dbSNP
rs1340300060 952 dbSNP
rs1216448671 953 dbSNP
rs923971201 960 dbSNP
rs1222520157 961 dbSNP
rs1446815783 966 dbSNP
rs936688499 968 dbSNP
rs1053754102 969 dbSNP
rs957696184 972 dbSNP
rs1283194976 975 dbSNP
rs900602413 978 dbSNP
rs74598838 979 dbSNP
rs1294952053 980 dbSNP
rs1436702913 982 dbSNP
rs568874447 983 dbSNP
rs1134959 986 dbSNP
rs1389371027 988 dbSNP
rs1005244997 991 dbSNP
rs1175589846 994 dbSNP
rs141024492 995 dbSNP
rs1191996551 997 dbSNP
rs1475173330 998 dbSNP
rs757984050 1021 dbSNP
rs1172232678 1022 dbSNP
rs940759386 1023 dbSNP
rs201604363 1029 dbSNP
rs1037813797 1033 dbSNP
rs200078706 1033 dbSNP
rs1263121029 1051 dbSNP
rs1202280691 1053 dbSNP
rs1320845092 1060 dbSNP
rs1302680084 1065 dbSNP
rs963583695 1066 dbSNP
rs1360910678 1067 dbSNP
rs1268042593 1076 dbSNP
rs1049641308 1081 dbSNP
rs1177696245 1092 dbSNP
rs1336033264 1098 dbSNP
rs779436845 1103 dbSNP
rs574434468 1104 dbSNP
rs1176950569 1117 dbSNP
rs1409444150 1118 dbSNP
rs543187000 1119 dbSNP
rs12589717 1120 dbSNP
rs1450507764 1123 dbSNP
rs1025126910 1126 dbSNP
rs58541277 1128 dbSNP
rs978790054 1129 dbSNP
rs1484492621 1131 dbSNP
rs1317304961 1136 dbSNP
rs373571402 1137 dbSNP
rs924224365 1138 dbSNP
rs780953590 1143 dbSNP
rs1263743225 1147 dbSNP
rs545172031 1149 dbSNP
rs1335507061 1150 dbSNP
rs117157375 1151 dbSNP
rs921909242 1155 dbSNP
rs530803125 1156 dbSNP
rs1450164259 1163 dbSNP
rs544245543 1169 dbSNP
rs960274287 1170 dbSNP
rs943463817 1173 dbSNP
rs1352791542 1174 dbSNP
rs765361008 1178 dbSNP
rs932082249 1187 dbSNP
rs1170753671 1192 dbSNP
rs907849811 1198 dbSNP
rs769694680 1200 dbSNP
rs1425920027 1201 dbSNP
rs890323068 1204 dbSNP
rs940534945 1210 dbSNP
rs1257535200 1212 dbSNP
rs1260413844 1215 dbSNP
rs1036572976 1230 dbSNP
rs920700235 1239 dbSNP
rs899097312 1241 dbSNP
rs560826859 1242 dbSNP
rs1477246326 1245 dbSNP
rs1034001877 1246 dbSNP
rs1242386562 1247 dbSNP
rs911085856 1250 dbSNP
rs1313379121 1256 dbSNP
rs1223108602 1259 dbSNP
rs943916678 1267 dbSNP
rs1309871752 1269 dbSNP
rs894133681 1273 dbSNP
rs1410504128 1303 dbSNP
rs529971756 1306 dbSNP
rs546738954 1317 dbSNP
rs1379927248 1320 dbSNP
rs1464954092 1346 dbSNP
rs1013994401 1348 dbSNP
rs773548080 1350 dbSNP
rs1172387650 1353 dbSNP
rs891424908 1355 dbSNP
rs945740361 1357 dbSNP
rs566573511 1358 dbSNP
rs904268470 1359 dbSNP
rs1207644993 1360 dbSNP
rs1001273182 1363 dbSNP
rs532187316 1364 dbSNP
rs762798365 1382 dbSNP
rs57662750 1389 dbSNP
rs1402671785 1394 dbSNP
rs180963642 1396 dbSNP
rs1340108407 1400 dbSNP
rs1031562835 1401 dbSNP
rs1327067473 1402 dbSNP
rs1405679770 1408 dbSNP
rs1014436159 1413 dbSNP
rs1285238611 1414 dbSNP
rs1344940887 1417 dbSNP
rs958337782 1419 dbSNP
rs1391917921 1420 dbSNP
rs1332793288 1421 dbSNP
rs1391517104 1422 dbSNP
rs989716024 1426 dbSNP
rs112771967 1427 dbSNP
rs1351039882 1434 dbSNP
rs766895957 1442 dbSNP
rs931964782 1443 dbSNP
rs973433587 1451 dbSNP
rs1434486893 1453 dbSNP
rs1218512185 1457 dbSNP
rs1283507251 1458 dbSNP
rs1487743410 1461 dbSNP
rs1222632013 1462 dbSNP
rs1268787330 1467 dbSNP
rs1431963821 1472 dbSNP
rs770832650 1473 dbSNP
rs1209226645 1474 dbSNP
rs111366167 1476 dbSNP
rs1322922293 1477 dbSNP
rs1364877340 1477 dbSNP
rs1441999281 1478 dbSNP
rs1157210177 1480 dbSNP
rs1331965620 1482 dbSNP
rs553031270 1484 dbSNP
rs1295082758 1506 dbSNP
rs987427594 1507 dbSNP
rs1433406253 1526 dbSNP
rs1321839329 1527 dbSNP
rs1367729661 1527 dbSNP
rs911991331 1528 dbSNP
rs986236395 1531 dbSNP
rs911033510 1532 dbSNP
rs1467129312 1534 dbSNP
rs940744690 1539 dbSNP
rs370710108 1544 dbSNP
rs1191999898 1546 dbSNP
rs1425494064 1550 dbSNP
rs1036218786 1560 dbSNP
rs775443913 1561 dbSNP
rs976631769 1563 dbSNP
rs1253992622 1570 dbSNP
rs1202286766 1594 dbSNP
rs1345776670 1597 dbSNP
rs898977418 1599 dbSNP
rs1250989070 1605 dbSNP
rs1226402053 1606 dbSNP
rs913151289 1607 dbSNP
rs1298723950 1614 dbSNP
rs1300584721 1615 dbSNP
rs569014390 1616 dbSNP
rs537839231 1622 dbSNP
rs528842379 1624 dbSNP
rs894184669 1625 dbSNP
rs764327434 1626 dbSNP
rs185880010 1631 dbSNP
rs1024362250 1634 dbSNP
rs1266708408 1635 dbSNP
rs943527435 1639 dbSNP
rs1189467988 1647 dbSNP
rs1487259013 1649 dbSNP
rs1249819670 1657 dbSNP
rs1014385603 1659 dbSNP
rs1484194333 1664 dbSNP
rs1015554738 1673 dbSNP
rs1245756402 1674 dbSNP
rs548826486 1676 dbSNP
rs567946997 1677 dbSNP
rs12590316 1682 dbSNP
rs1177192782 1685 dbSNP
rs367693007 1697 dbSNP
rs536562199 1698 dbSNP
rs553482391 1699 dbSNP
rs144884164 1700 dbSNP
rs755577437 1701 dbSNP
rs1372065731 1705 dbSNP
rs1308236898 1708 dbSNP
rs958183502 1709 dbSNP
rs1011200543 1713 dbSNP
rs1029249003 1714 dbSNP
rs762211904 1716 dbSNP
rs1363146893 1727 dbSNP
rs953573737 1729 dbSNP
rs112066116 1730 dbSNP
rs1252875076 1733 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084065. RNA binding protein: AGO2. Condition:CLIP_emetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' guccgugcccucgaGUCCACu 5'
                        |||||| 
Target 5' ------------aaCAGGUGa 3'
1 - 9
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084065
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_emetine_AbnovaAb
Location of target site ENST00000557649.1 | 3UTR | AACAGGUGAAGUGGU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
THCA -0.117 0.4 -0.071 0.44 7 Click to see details
THCA -0.117 0.4 -0.071 0.44 7 Click to see details
THCA -0.117 0.4 -0.071 0.44 7 Click to see details
THCA -0.117 0.4 -0.071 0.44 7 Click to see details
THCA -0.117 0.4 -0.071 0.44 7 Click to see details
THCA -0.117 0.4 -0.071 0.44 7 Click to see details
102 hsa-miR-3622b-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT076713 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 2
MIRT080212 PRKACB protein kinase cAMP-activated catalytic subunit beta 2 2
MIRT081398 GTPBP3 GTP binding protein 3, mitochondrial 2 2
MIRT107158 ZBTB43 zinc finger and BTB domain containing 43 2 2
MIRT254071 BACH1 BTB domain and CNC homolog 1 2 2
MIRT409790 FOXO3 forkhead box O3 2 2
MIRT448679 MAPK9 mitogen-activated protein kinase 9 2 2
MIRT450206 ABHD15 abhydrolase domain containing 15 2 2
MIRT486621 PDK3 pyruvate dehydrogenase kinase 3 2 2
MIRT489267 TTLL1 tubulin tyrosine ligase like 1 2 2
MIRT493117 MKNK2 MAP kinase interacting serine/threonine kinase 2 2 4
MIRT494570 BAK1 BCL2 antagonist/killer 1 2 2
MIRT497395 RALY RALY heterogeneous nuclear ribonucleoprotein 2 2
MIRT504900 CCDC86 coiled-coil domain containing 86 2 2
MIRT505192 USP46 ubiquitin specific peptidase 46 2 4
MIRT506522 MSANTD4 Myb/SANT DNA binding domain containing 4 with coiled-coils 2 6
MIRT508162 ABCC5 ATP binding cassette subfamily C member 5 2 8
MIRT508545 PARVG parvin gamma 2 4
MIRT509850 BIRC5 baculoviral IAP repeat containing 5 2 6
MIRT510088 PPWD1 peptidylprolyl isomerase domain and WD repeat containing 1 2 8
MIRT512094 CRK CRK proto-oncogene, adaptor protein 2 4
MIRT515381 RPL7 ribosomal protein L7 2 2
MIRT519176 SCO1 SCO1, cytochrome c oxidase assembly protein 2 2
MIRT519964 ZCCHC8 zinc finger CCHC-type containing 8 2 2
MIRT522292 NKAP NFKB activating protein 2 2
MIRT523160 HMGB2 high mobility group box 2 2 4
MIRT525314 FANCA Fanconi anemia complementation group A 2 2
MIRT528194 PLEKHM2 pleckstrin homology and RUN domain containing M2 2 2
MIRT532885 ZNF451 zinc finger protein 451 2 2
MIRT538209 CYR61 cysteine rich angiogenic inducer 61 2 2
MIRT539497 ACTN4 actinin alpha 4 2 2
MIRT554600 RRAGC Ras related GTP binding C 2 2
MIRT562444 DCTN6 dynactin subunit 6 2 2
MIRT562748 AOC3 amine oxidase, copper containing 3 2 2
MIRT565798 SEC14L5 SEC14 like lipid binding 5 2 2
MIRT565838 SCML2 Scm polycomb group protein like 2 2 2
MIRT566072 RCC2 regulator of chromosome condensation 2 2 2
MIRT566104 RBPJ recombination signal binding protein for immunoglobulin kappa J region 2 2
MIRT572407 MRPS14 mitochondrial ribosomal protein S14 2 2
MIRT576198 Vsig2 V-set and immunoglobulin domain containing 2 2 2
MIRT576313 Acbd7 acyl-Coenzyme A binding domain containing 7 2 2
MIRT576651 Mill2 MHC I like leukocyte 2 1 1
MIRT576859 Socs6 suppressor of cytokine signaling 6 2 2
MIRT606819 BICD2 BICD cargo adaptor 2 2 2
MIRT610738 NUDT16 nudix hydrolase 16 2 4
MIRT614798 RORA RAR related orphan receptor A 2 2
MIRT619006 NTMT1 N-terminal Xaa-Pro-Lys N-methyltransferase 1 2 2
MIRT619420 NOS1AP nitric oxide synthase 1 adaptor protein 2 2
MIRT620405 MYO1H myosin IH 2 2
MIRT624869 ABHD13 abhydrolase domain containing 13 2 2
MIRT633527 ZFP30 ZFP30 zinc finger protein 2 2
MIRT633927 DNAH9 dynein axonemal heavy chain 9 2 2
MIRT636611 CLIC5 chloride intracellular channel 5 2 2
MIRT640616 MIOX myo-inositol oxygenase 2 2
MIRT642605 C14orf180 chromosome 14 open reading frame 180 2 2
MIRT644624 SRSF2 serine and arginine rich splicing factor 2 2 2
MIRT655113 PHLDA3 pleckstrin homology like domain family A member 3 2 2
MIRT658976 DNAJB5 DnaJ heat shock protein family (Hsp40) member B5 2 4
MIRT661495 CHMP1B charged multivesicular body protein 1B 2 2
MIRT662996 TMEM59 transmembrane protein 59 2 2
MIRT663075 SFR1 SWI5 dependent homologous recombination repair protein 1 2 2
MIRT665405 WEE1 WEE1 G2 checkpoint kinase 2 2
MIRT666106 SSR1 signal sequence receptor subunit 1 2 2
MIRT669562 ALDOA aldolase, fructose-bisphosphate A 2 2
MIRT670070 ZNF783 zinc finger family member 783 2 2
MIRT671192 ZNF891 zinc finger protein 891 2 2
MIRT675361 KLHL26 kelch like family member 26 2 2
MIRT678857 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT679443 C19orf52 translocase of inner mitochondrial membrane 29 2 2
MIRT684163 ALDH1B1 aldehyde dehydrogenase 1 family member B1 2 2
MIRT684543 ZNF460 zinc finger protein 460 2 2
MIRT684674 SLC2A11 solute carrier family 2 member 11 2 2
MIRT684971 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT686006 NEK4 NIMA related kinase 4 2 2
MIRT687758 KIAA1328 KIAA1328 2 2
MIRT688961 ATXN3 ataxin 3 2 2
MIRT689409 UQCR11 ubiquinol-cytochrome c reductase, complex III subunit XI 2 2
MIRT690001 MMP17 matrix metallopeptidase 17 2 2
MIRT690165 ELP3 elongator acetyltransferase complex subunit 3 2 2
MIRT690202 C5orf45 MRN complex interacting protein 2 2
MIRT690477 ZNF33A zinc finger protein 33A 2 2
MIRT690566 MICA MHC class I polypeptide-related sequence A 2 2
MIRT692160 C10orf111 chromosome 10 open reading frame 111 2 2
MIRT693430 PLGLB2 plasminogen-like B2 2 2
MIRT693547 ZNF708 zinc finger protein 708 2 2
MIRT693697 PLGLB1 plasminogen-like B1 2 2
MIRT695006 HSPA6 heat shock protein family A (Hsp70) member 6 2 2
MIRT698525 TFRC transferrin receptor 2 2
MIRT699574 SIKE1 suppressor of IKBKE 1 2 2
MIRT703446 FYTTD1 forty-two-three domain containing 1 2 2
MIRT704397 CTSS cathepsin S 2 2
MIRT704485 CPT1A carnitine palmitoyltransferase 1A 2 2
MIRT709822 STPG1 sperm tail PG-rich repeat containing 1 2 2
MIRT710859 COQ7 coenzyme Q7, hydroxylase 2 2
MIRT711893 INSIG2 insulin induced gene 2 2 2
MIRT713796 CPLX2 complexin 2 2 2
MIRT718800 C1GALT1C1 C1GALT1 specific chaperone 1 2 2
MIRT719501 SEC24B SEC24 homolog B, COPII coat complex component 2 2
MIRT719722 PDE6B phosphodiesterase 6B 2 2
MIRT722204 URM1 ubiquitin related modifier 1 2 2
MIRT723523 CLPTM1L CLPTM1 like 2 2
MIRT725471 GRAP2 GRB2-related adaptor protein 2 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-3622b-3p Platinum 23939 sensitive tissue
hsa-miR-3622b-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3622b-3p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)
hsa-miR-3622b-3p Paclitaxel/Docetaxel/Vinorelbine/Doxorubicin/Etoposide resistant cell line (Bads-200)

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