pre-miRNA Information
pre-miRNA hsa-mir-6501   
Genomic Coordinates chr21: 33550662 - 33550728
Description Homo sapiens miR-6501 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6501-5p
Sequence 3| AGUUGCCAGGGCUGCCUUUGGU |24
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
1055619 20 ClinVar
COSM5974214 5 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs756127353 5 dbSNP
rs764400023 6 dbSNP
rs753967693 8 dbSNP
rs1283296362 14 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ZNF829   
Synonyms -
Description zinc finger protein 829
Transcript NM_001037232   
Other Transcripts NM_001171979   
Expression
Putative miRNA Targets on ZNF829
3'UTR of ZNF829
(miRNA target sites are highlighted)
>ZNF829|NM_001037232|3'UTR
   1 ATGACAGTAAAGTAAGACCATTTTGTTAACCTTTATAATAATTTTTTTAAAACAGGTAAGGAGAACAAATTAGGATACAT
  81 ATTATCAAAGGTTCTCCTATGTATTCGTTTTTAAACGATACGATAACAAAGTACCAAGTACCAAAACCTTGGTGGCTTAA
 161 AACAAGAGAAATTTATTCTCTCATAGTTTAGAGCCTGGAAATCTAAACTCAAGGGTGCTGATCGTTTTGGTTCCTTCTGA
 241 GGACTCTGAGGATCTGTTCTATGCCTTTTTCCTAACCTCTGTTAACAGCTGGCAGTCCTTGGCATTCCATGGCTTTTACA
 321 TACACCATTCCAATCTCTGCCTCCATCTTCACATTGCATTCTCGCTGTGTATCTCTGTGTATGTCTTTTATTTGGACACC
 401 AGTCAGGTTAGATTGGGGTTACCTGGTGACCTCATCTTAACTTGATTATATCTGCCAAGACCCTGTTTCCAAGTAAGGTC
 481 ACATTTACCGGTACCAGGGGTTAGGACTTCAGCATATCTTTTTAGGGGATACAGTTCAACCCATAATACCCTGTTAGAAT
 561 GATTTTGTCTAATATATTTGTAATTTCCTTTTATACATAAGTTGTTAGTCAAATTTATTTTATTTTATTTTATTTTGAGA
 641 CAGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGTGTGATCTCAGCTCACTGCAACCTCCAGCTCCTGAGTTCAAG
 721 CGATTCTTGTGCCTCAGCCTCTCAAGTAGTTGGGATTACAGGCATGCGCCACCATGCCCGGCTAATTTTTTTTTTTTTTT
 801 TTTTTGTATTTTTAGTAGCGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACTTCAAGTGATCTGCCC
 881 GCCTCAGCCTCCCAAAGTGCTGGGATTACAGACGTGAGCCACCGTGATGGCCAAAACAGACTTTATACCAACAAAAATTA
 961 AAAAGGACAAAGAAGGTCATTTATAATGATAAAGGATAAATTCAACAAGAAGATAAAACAATCCTAAATATGTATGCACC
1041 CAACACTGCAACACCCAGATCCATAACACAGATACTACTAGACCTAAGAAAAGAGATAGACAGCAATACAACAATAGCAG
1121 GGGACTTCACCACTCCATTGACAGCACTAGACAGATCACTGGGACAGAAATCAACAAAGAAACTCTGGACTTAAATTGGA
1201 CTCTACACCAAATGGACCCAACAGACATCTGAAGAACATTCTACCCAACAACCACAGAATATATACTCTTCTCTTCTGTG
1281 CATGGAACATTCTCAAAAATAGGTCATATACTGGACCACAAAGCAAGTATCAATAAATTTTAAAAAAACAAAATCATATC
1361 TAACATCTTCTCTGACCATAGTGGAATAAAACTAGATATCAATACCAAGAGGAACTCTCAAAACAGATACATGGAATTTA
1441 AACAGCTTGCTCCTGAATGATTTTTGGATCAATGATGAAACTAAGGTGGAAATTTAAAATTTTTTGAAATAAATGAAAAT
1521 AGAGACAAAACACATGAAAACATCTGAGATACAGCAAAAGCAGTGCTAAGAGAGGATTTTATAGCATTAAATGCCTACAC
1601 CAAAAAGATAGAAAAATCTCAAATGAATAGCCTAACGTCACATCTCAAGGAACTAGGAAAAAACAAAACAAACTCAACCC
1681 AAAGCTGGCAGAAGAAAAGCAATAACAAATATCAGAGCAGGCAAAAATGAGACTGAGAACAAAGGAATGCAAAAGATCAA
1761 TAAAAGAAAAAGTTGGTTCTTTGCAAAGATAAAACTGACAGACCACTAGCTAGATTAACCAAGAAAAAAAGAAGATTCAA
1841 ATAAATACAATCAGAAATGATAAGGTGATATTATAACTGATAACACAGACATATAAAATATCAGCAGAAACTATATGCAC
1921 ATATTAGAAAACCTAGAGGAAGTGGATAAATTCCTAGAAACACATAACCTTCCAAGATTGAACCAGGGAGAAATAGGAAT
2001 CCTCAACAGACTACTGAGTATTGAAATTGAATCAGTAATAGAAAAAAATCTTGCAAAAACAAAAAGCCCAGGACCAGACA
2081 GATTCACAGCTGAATTCTACTAGACATGCAAGGAAGAACTAGTAACAGCACTATTGAAACTATTCCAAAAATTATAGGAG
2161 GGAATCCTCCCTAACTCATTCTACAAAGCCAGTATCATCCTGATACTGAAGCCAGGCAAGGATAAAACACACAAAAAAAC
2241 TACAAGCCAATATCCCTGATGAAAATAGACACAAAAATCTTCAGCAAAATACTAGCAAACCAAATCAAACAGTACATAAA
2321 AAAGATAGTAACAGCACAGTCAAGTGGATTTTATTCCTGGGGTGTAAGGATGGCTCAACATATGCAACTCAATACATGAT
2401 TCATCACATACACAGAATTAAAAATAAGCCAGGCACTCACACCTGTAATCCCAGCACTTTGCAAGGCCAAGGCGGGCAGA
2481 TCACATGATGTCAAGAGTTTGAGACCAGTCTGGCTGACATGGCGAAACCCTGTCTCTACTAAAAATAGAAAAATTGGCTG
2561 GGCATGGTGGCAGGCACTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTACTTGAACCTGAGAAGCGGAGGTT
2641 GCAGTGAGCTGAGATAGTGCCATTGCACTCCAGCCTGGGCAACAGAGCAAATTGCTTGAATGTGGGAGGTGGAGGTTGCA
2721 GTGAGCCGAGATTATGCCATTGCACTCCAGCCGGGGGAGCAACAAAGCCAGACTCCATCTCAAAAAAAAACCAAAAAAAA
2801 TCCTATTTAGTACAAGGTACATTATTTAGGTAATGAGTCCATTAAAAGCCAACACTTTCCCCACTACACTATATGTGTAT
2881 GTAACACAACTGCCCTTGTAACTTCCTAAACCTATAATTAAGAAACAATAAAAGGCAAATTAAGAATGCTTTTTTAAAAG
2961 GTGGGGGCATTATGCTAATAAGTTACTGTGGATTTCAGAGTGCAGAGTAGAAAGATCACAAGAATTTAGTGTGGTAGGTG
3041 GGAACAGAAAATGGGTGTATAAATTTTATTGACGTGGGAGTACTGGATATTGTAGAGACAGATATCATCAGGGCAAGGAG
3121 ATTAAAGATTTTTGCATTGACGGTTTGACACTATATTGTGGTAATAACACTGTATGTGTTGGGAGATAGAACAGGAAACA
3201 TCTTCCCTGGAATATGTATACTATTAAATGTTTTATCAAACTTTTGATCAAACAAGACAGCACAATTTATAATTTCATTT
3281 CTATTTCTATGTTATGAGAAACTGATCATTTATTCAAATGTTTAACAGGCATGTTCATGTTACTATAAACTCTTCTGTTT
3361 CACCATCAAAAAAAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ugguuuccGUCGGGACCGUUGa 5'
                  |||||: |||||| 
Target 5' ttgcactcCAGCCTGGGCAACa 3'
2663 - 2684 134.00 -18.50
2
miRNA  3' ugguuuCCGUC-GGGACCGUuga 5'
                ||||| ||:|||||   
Target 5' acagctGGCAGTCCTTGGCAttc 3'
285 - 307 128.00 -22.60
3
miRNA  3' ugGUUUCCGUCGG-----GACCGUUga 5'
            ||||  || ||     ||||||:  
Target 5' aaCAAACTCAACCCAAAGCTGGCAGaa 3'
1667 - 1693 124.00 -14.10
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31520071 10 COSMIC
COSN512331 11 COSMIC
COSN30166279 13 COSMIC
COSN30484691 19 COSMIC
COSN23193150 41 COSMIC
COSN30671272 42 COSMIC
COSN31559316 44 COSMIC
COSN30504681 56 COSMIC
COSN31533413 56 COSMIC
COSN31581551 94 COSMIC
COSN31573303 106 COSMIC
COSN16242586 121 COSMIC
COSN31598076 131 COSMIC
COSN28190622 167 COSMIC
COSN21934684 196 COSMIC
COSN9849852 573 COSMIC
COSN17719264 686 COSMIC
COSN31932809 771 COSMIC
COSN15728555 875 COSMIC
COSN21700301 893 COSMIC
COSN25286956 1109 COSMIC
COSN21628694 1123 COSMIC
COSN15248893 1254 COSMIC
COSN7125819 1749 COSMIC
COSN8260057 2384 COSMIC
COSN25475580 2493 COSMIC
COSN16133150 2753 COSMIC
COSN20972478 2790 COSMIC
COSN29265644 2818 COSMIC
COSN15579088 2988 COSMIC
COSN26256241 3073 COSMIC
COSN6143641 3144 COSMIC
COSN21481987 3306 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs780335686 4 dbSNP
rs1346326507 5 dbSNP
rs774854458 15 dbSNP
rs770161506 20 dbSNP
rs549461697 21 dbSNP
rs757836509 30 dbSNP
rs1341429474 31 dbSNP
rs752320520 35 dbSNP
rs1265427973 49 dbSNP
rs1489862196 49 dbSNP
rs768649215 49 dbSNP
rs1006271689 63 dbSNP
rs1198232112 66 dbSNP
rs990221957 71 dbSNP
rs957610873 75 dbSNP
rs887881213 78 dbSNP
rs1047897966 79 dbSNP
rs1405474297 81 dbSNP
rs993646815 84 dbSNP
rs188618360 99 dbSNP
rs1362051184 100 dbSNP
rs1333628249 102 dbSNP
rs373771511 103 dbSNP
rs971615847 106 dbSNP
rs949005205 107 dbSNP
rs916191702 116 dbSNP
rs1054735954 117 dbSNP
rs781733319 121 dbSNP
rs894622853 122 dbSNP
rs566644825 128 dbSNP
rs1357547729 137 dbSNP
rs925018466 137 dbSNP
rs1346748785 139 dbSNP
rs369553500 147 dbSNP
rs184064421 148 dbSNP
rs192044950 149 dbSNP
rs1438917295 153 dbSNP
rs897485554 164 dbSNP
rs757550264 168 dbSNP
rs944653911 173 dbSNP
rs1395447890 183 dbSNP
rs751893736 184 dbSNP
rs1327366571 187 dbSNP
rs964662269 191 dbSNP
rs1376788141 194 dbSNP
rs1017594823 197 dbSNP
rs1476912440 214 dbSNP
rs1448068820 218 dbSNP
rs1311876308 224 dbSNP
rs1380916260 244 dbSNP
rs1422997489 246 dbSNP
rs1244271470 249 dbSNP
rs1187685325 250 dbSNP
rs1050311434 251 dbSNP
rs1194136719 252 dbSNP
rs573857681 261 dbSNP
rs569052731 263 dbSNP
rs139624613 266 dbSNP
rs561459571 269 dbSNP
rs1026398909 272 dbSNP
rs1421722774 284 dbSNP
rs578208691 286 dbSNP
rs539910740 288 dbSNP
rs528150733 293 dbSNP
rs993615885 310 dbSNP
rs936100285 320 dbSNP
rs907329355 324 dbSNP
rs1024478024 341 dbSNP
rs1013560149 345 dbSNP
rs531921179 346 dbSNP
rs1333815126 354 dbSNP
rs1404312763 358 dbSNP
rs1395685770 359 dbSNP
rs763657544 361 dbSNP
rs977433650 363 dbSNP
rs59122318 364 dbSNP
rs936324698 366 dbSNP
rs752224671 372 dbSNP
rs1317246430 375 dbSNP
rs991670861 376 dbSNP
rs1259753866 392 dbSNP
rs903570296 395 dbSNP
rs1042114523 397 dbSNP
rs1215098789 400 dbSNP
rs1199646867 407 dbSNP
rs73039109 419 dbSNP
rs1272886031 425 dbSNP
rs1443757284 427 dbSNP
rs187581297 433 dbSNP
rs923058789 455 dbSNP
rs975960406 465 dbSNP
rs943252242 473 dbSNP
rs1478452021 486 dbSNP
rs1173385470 487 dbSNP
rs1439952086 489 dbSNP
rs150552165 490 dbSNP
rs867485821 491 dbSNP
rs1328245546 497 dbSNP
rs1303761222 499 dbSNP
rs1404684750 504 dbSNP
rs557419284 507 dbSNP
rs961812700 510 dbSNP
rs984745116 515 dbSNP
rs952018184 516 dbSNP
rs772975828 524 dbSNP
rs1015028084 525 dbSNP
rs1310359770 527 dbSNP
rs776542167 529 dbSNP
rs1026325717 532 dbSNP
rs1256346585 551 dbSNP
rs766250703 553 dbSNP
rs1213955288 560 dbSNP
rs1412153557 565 dbSNP
rs1423636455 566 dbSNP
rs971523013 571 dbSNP
rs1265930688 574 dbSNP
rs1433095368 575 dbSNP
rs1177280681 589 dbSNP
rs1024863975 594 dbSNP
rs1013070272 596 dbSNP
rs77092519 597 dbSNP
rs1158210990 605 dbSNP
rs1455022246 625 dbSNP
rs1361392634 627 dbSNP
rs1033224031 629 dbSNP
rs1401993088 637 dbSNP
rs1000440391 638 dbSNP
rs903496715 639 dbSNP
rs1195113237 646 dbSNP
rs1042040561 649 dbSNP
rs945097509 650 dbSNP
rs1391154281 652 dbSNP
rs1301754154 653 dbSNP
rs1313664177 655 dbSNP
rs1237672086 666 dbSNP
rs1284952106 671 dbSNP
rs901607083 680 dbSNP
rs1218226745 685 dbSNP
rs1250286396 690 dbSNP
rs1263116366 706 dbSNP
rs1040556180 716 dbSNP
rs943199346 721 dbSNP
rs555920298 722 dbSNP
rs183163709 727 dbSNP
rs774686495 731 dbSNP
rs1233460059 734 dbSNP
rs930548009 746 dbSNP
rs1381191499 749 dbSNP
rs566956525 762 dbSNP
rs936114518 767 dbSNP
rs190168099 768 dbSNP
rs1008607597 771 dbSNP
rs1372812519 774 dbSNP
rs539209822 777 dbSNP
rs971830920 779 dbSNP
rs1024373253 780 dbSNP
rs950066565 782 dbSNP
rs1173631575 794 dbSNP
rs1435809594 797 dbSNP
rs1221640798 806 dbSNP
rs1225078249 806 dbSNP
rs1267820095 806 dbSNP
rs1287140948 806 dbSNP
rs1320535177 806 dbSNP
rs138923660 806 dbSNP
rs1441807906 806 dbSNP
rs1456798518 806 dbSNP
rs71171475 806 dbSNP
rs1397284638 807 dbSNP
rs1052985937 808 dbSNP
rs1437465062 809 dbSNP
rs1249427271 814 dbSNP
rs1396663624 814 dbSNP
rs1177407840 815 dbSNP
rs1463956473 815 dbSNP
rs1481364258 816 dbSNP
rs1235242024 817 dbSNP
rs1330467925 819 dbSNP
rs1210086402 820 dbSNP
rs917212525 822 dbSNP
rs760384229 823 dbSNP
rs1377977779 827 dbSNP
rs1228433077 841 dbSNP
rs1237641659 849 dbSNP
rs569141971 855 dbSNP
rs1316087043 870 dbSNP
rs991703522 870 dbSNP
rs28744541 875 dbSNP
rs186758599 880 dbSNP
rs1377072396 881 dbSNP
rs1208442509 890 dbSNP
rs1033150317 893 dbSNP
rs1312288681 895 dbSNP
rs1483688616 899 dbSNP
rs1183696169 902 dbSNP
rs1000366600 904 dbSNP
rs1415959018 910 dbSNP
rs1421525135 913 dbSNP
rs547089852 914 dbSNP
rs1014689452 923 dbSNP
rs1008619261 929 dbSNP
rs954365830 931 dbSNP
rs1331911639 932 dbSNP
rs1358266215 933 dbSNP
rs1448235354 938 dbSNP
rs1314207341 941 dbSNP
rs1028661797 955 dbSNP
rs1021012128 956 dbSNP
rs1453564180 965 dbSNP
rs1364729394 976 dbSNP
rs1279450843 987 dbSNP
rs1342049648 990 dbSNP
rs1217884654 1003 dbSNP
rs1159470093 1016 dbSNP
rs893713144 1018 dbSNP
rs1420439097 1020 dbSNP
rs546170613 1031 dbSNP
rs1261145591 1035 dbSNP
rs1488040153 1036 dbSNP
rs901530551 1052 dbSNP
rs1194477430 1054 dbSNP
rs1186545510 1055 dbSNP
rs528210871 1060 dbSNP
rs1476336495 1061 dbSNP
rs1364376505 1063 dbSNP
rs1424152806 1064 dbSNP
rs1414685924 1072 dbSNP
rs1175063740 1074 dbSNP
rs1485976713 1075 dbSNP
rs999381854 1096 dbSNP
rs902314161 1097 dbSNP
rs1298252835 1098 dbSNP
rs1328732296 1099 dbSNP
rs1040115926 1122 dbSNP
rs1434894939 1130 dbSNP
rs1214342829 1138 dbSNP
rs1368680416 1140 dbSNP
rs1007729185 1143 dbSNP
rs1261024854 1147 dbSNP
rs867046079 1148 dbSNP
rs1353215197 1160 dbSNP
rs950097750 1166 dbSNP
rs1320088590 1175 dbSNP
rs1048943392 1193 dbSNP
rs1448691251 1199 dbSNP
rs1234016363 1200 dbSNP
rs1245923664 1201 dbSNP
rs1454593015 1202 dbSNP
rs895858664 1204 dbSNP
rs182531014 1206 dbSNP
rs367642063 1208 dbSNP
rs1158759730 1212 dbSNP
rs148106944 1226 dbSNP
rs1404113893 1227 dbSNP
rs1036709254 1234 dbSNP
rs1332180218 1249 dbSNP
rs1386145228 1257 dbSNP
rs974034947 1262 dbSNP
rs1307497999 1263 dbSNP
rs1376462286 1272 dbSNP
rs950075529 1284 dbSNP
rs940878295 1293 dbSNP
rs145721620 1294 dbSNP
rs1391781781 1299 dbSNP
rs769990403 1303 dbSNP
rs987260418 1307 dbSNP
rs74858500 1310 dbSNP
rs1468833754 1314 dbSNP
rs1028694341 1334 dbSNP
rs558584937 1334 dbSNP
rs74456838 1341 dbSNP
rs1438701442 1344 dbSNP
rs978914102 1346 dbSNP
rs957916438 1347 dbSNP
rs967549010 1349 dbSNP
rs1365171555 1350 dbSNP
rs1471564019 1355 dbSNP
rs1032271042 1359 dbSNP
rs999813605 1360 dbSNP
rs371314342 1364 dbSNP
rs1329764017 1366 dbSNP
rs1399936342 1370 dbSNP
rs1024759825 1372 dbSNP
rs1331194780 1375 dbSNP
rs1338922371 1384 dbSNP
rs1014325079 1396 dbSNP
rs1284805434 1397 dbSNP
rs998882540 1402 dbSNP
rs1335425953 1413 dbSNP
rs377706539 1421 dbSNP
rs1234993244 1430 dbSNP
rs1427789512 1433 dbSNP
rs965706048 1453 dbSNP
rs1019029526 1457 dbSNP
rs1457200663 1470 dbSNP
rs1262194847 1486 dbSNP
rs1055745666 1495 dbSNP
rs191057402 1496 dbSNP
rs888880579 1497 dbSNP
rs1417895444 1499 dbSNP
rs374160492 1506 dbSNP
rs1169088880 1518 dbSNP
rs1423517944 1533 dbSNP
rs994652376 1534 dbSNP
rs1300230639 1535 dbSNP
rs1400395690 1540 dbSNP
rs1487363776 1543 dbSNP
rs1334932901 1545 dbSNP
rs897689783 1546 dbSNP
rs1357383537 1551 dbSNP
rs574366518 1552 dbSNP
rs1214543264 1560 dbSNP
rs1317195499 1564 dbSNP
rs940937863 1570 dbSNP
rs1252797588 1584 dbSNP
rs1342473322 1585 dbSNP
rs1199458691 1587 dbSNP
rs908071307 1589 dbSNP
rs567507201 1590 dbSNP
rs950019089 1596 dbSNP
rs775155065 1600 dbSNP
rs1263151490 1607 dbSNP
rs917219767 1609 dbSNP
rs1298229277 1616 dbSNP
rs1385494886 1636 dbSNP
rs1056220009 1637 dbSNP
rs937398970 1641 dbSNP
rs1465744486 1642 dbSNP
rs769215486 1654 dbSNP
rs926026931 1656 dbSNP
rs1377500160 1664 dbSNP
rs1417987031 1666 dbSNP
rs1370689688 1673 dbSNP
rs1297636430 1678 dbSNP
rs1361218975 1685 dbSNP
rs921695527 1686 dbSNP
rs1297460414 1688 dbSNP
rs781767992 1711 dbSNP
rs974459013 1712 dbSNP
rs967517586 1723 dbSNP
rs1396048192 1728 dbSNP
rs1165602892 1736 dbSNP
rs1461445744 1748 dbSNP
rs913398023 1768 dbSNP
rs1486482390 1771 dbSNP
rs1188746330 1784 dbSNP
rs976991455 1789 dbSNP
rs1265869330 1791 dbSNP
rs757716235 1791 dbSNP
rs555834378 1803 dbSNP
rs1397173913 1805 dbSNP
rs1438012528 1825 dbSNP
rs549666845 1831 dbSNP
rs1345790528 1836 dbSNP
rs985778145 1854 dbSNP
rs1454257257 1857 dbSNP
rs1290616699 1863 dbSNP
rs138835424 1867 dbSNP
rs1388481516 1871 dbSNP
rs1439944865 1873 dbSNP
rs1252147459 1875 dbSNP
rs1372752625 1875 dbSNP
rs1024792894 1904 dbSNP
rs573376312 1908 dbSNP
rs1027401420 1918 dbSNP
rs1317050335 1933 dbSNP
rs994621360 1942 dbSNP
rs897625502 1955 dbSNP
rs558242012 1957 dbSNP
rs1488429319 1960 dbSNP
rs1001986674 1961 dbSNP
rs1248542198 1974 dbSNP
rs1255246462 1975 dbSNP
rs1438067691 1977 dbSNP
rs1014150333 1978 dbSNP
rs1408962753 1979 dbSNP
rs1195264314 1982 dbSNP
rs1162731894 1984 dbSNP
rs1366696620 1987 dbSNP
rs895736975 1992 dbSNP
rs1253648449 1994 dbSNP
rs1396332848 1994 dbSNP
rs1444292320 2005 dbSNP
rs1297320625 2009 dbSNP
rs1005164370 2011 dbSNP
rs886675161 2012 dbSNP
rs1309894902 2017 dbSNP
rs62115572 2021 dbSNP
rs114111516 2023 dbSNP
rs1347614189 2027 dbSNP
rs933486485 2029 dbSNP
rs575314553 2032 dbSNP
rs922058370 2037 dbSNP
rs1233708411 2042 dbSNP
rs1481728921 2044 dbSNP
rs1441207231 2049 dbSNP
rs937325449 2052 dbSNP
rs747363645 2072 dbSNP
rs1038782915 2076 dbSNP
rs1452372711 2079 dbSNP
rs1043114969 2088 dbSNP
rs1419932939 2089 dbSNP
rs1372671326 2091 dbSNP
rs946137957 2097 dbSNP
rs1169456343 2099 dbSNP
rs913375771 2103 dbSNP
rs1354772473 2106 dbSNP
rs977336804 2113 dbSNP
rs925005755 2120 dbSNP
rs1300567712 2123 dbSNP
rs371376998 2132 dbSNP
rs911443602 2133 dbSNP
rs1396571570 2134 dbSNP
rs1169650750 2139 dbSNP
rs1274095006 2142 dbSNP
rs1309517419 2144 dbSNP
rs759055597 2154 dbSNP
rs145161831 2158 dbSNP
rs953014899 2166 dbSNP
rs966674991 2169 dbSNP
rs917850900 2171 dbSNP
rs1394270437 2189 dbSNP
rs1259588516 2198 dbSNP
rs531085583 2200 dbSNP
rs1455772024 2203 dbSNP
rs992003819 2204 dbSNP
rs1027333590 2212 dbSNP
rs1033471952 2214 dbSNP
rs375198009 2219 dbSNP
rs373240409 2227 dbSNP
rs369300083 2232 dbSNP
rs924474825 2232 dbSNP
rs973112216 2233 dbSNP
rs1374474170 2234 dbSNP
rs1434845854 2234 dbSNP
rs535416118 2239 dbSNP
rs1339125314 2240 dbSNP
rs963782184 2240 dbSNP
rs1042840512 2241 dbSNP
rs947322923 2243 dbSNP
rs1014733550 2245 dbSNP
rs1016292592 2246 dbSNP
rs186984525 2252 dbSNP
rs1217828503 2260 dbSNP
rs1279929489 2266 dbSNP
rs1348842188 2274 dbSNP
rs1213138017 2279 dbSNP
rs1438524484 2284 dbSNP
rs1005313769 2285 dbSNP
rs886408587 2302 dbSNP
rs1214907782 2311 dbSNP
rs1052022582 2324 dbSNP
rs1014491809 2326 dbSNP
rs546237218 2347 dbSNP
rs1394155126 2355 dbSNP
rs1454411481 2356 dbSNP
rs534275807 2363 dbSNP
rs1357998125 2372 dbSNP
rs1039602358 2381 dbSNP
rs1485603034 2383 dbSNP
rs1319633019 2396 dbSNP
rs936461710 2400 dbSNP
rs1034229144 2401 dbSNP
rs181943706 2405 dbSNP
rs904492587 2407 dbSNP
rs925004834 2408 dbSNP
rs1303068495 2409 dbSNP
rs1372035511 2417 dbSNP
rs551954572 2419 dbSNP
rs563705825 2428 dbSNP
rs946124075 2440 dbSNP
rs562968708 2442 dbSNP
rs1205791528 2454 dbSNP
rs1277467309 2458 dbSNP
rs891861074 2464 dbSNP
rs945051816 2465 dbSNP
rs1448642162 2468 dbSNP
rs1041156356 2471 dbSNP
rs752312794 2473 dbSNP
rs911425232 2474 dbSNP
rs985674734 2489 dbSNP
rs1330248383 2497 dbSNP
rs959275625 2503 dbSNP
rs1361701353 2509 dbSNP
rs926488453 2514 dbSNP
rs188802480 2518 dbSNP
rs1313379488 2519 dbSNP
rs1404053323 2523 dbSNP
rs113133676 2524 dbSNP
rs1405508024 2529 dbSNP
rs1395594789 2533 dbSNP
rs973081026 2539 dbSNP
rs961768424 2544 dbSNP
rs907599513 2545 dbSNP
rs185805338 2548 dbSNP
rs1365626547 2557 dbSNP
rs960138446 2558 dbSNP
rs149160240 2563 dbSNP
rs1352790792 2564 dbSNP
rs1034155531 2571 dbSNP
rs181625978 2574 dbSNP
rs1474903155 2575 dbSNP
rs1001382571 2582 dbSNP
rs1272332822 2586 dbSNP
rs968617694 2587 dbSNP
rs1215302018 2591 dbSNP
rs1021525142 2596 dbSNP
rs1436812546 2598 dbSNP
rs1181940916 2616 dbSNP
rs1234043553 2618 dbSNP
rs1474518877 2621 dbSNP
rs1164896977 2629 dbSNP
rs1010635193 2633 dbSNP
rs540639617 2651 dbSNP
rs1463385583 2654 dbSNP
rs1283923172 2656 dbSNP
rs1168960163 2657 dbSNP
rs1030332773 2663 dbSNP
rs1392142710 2671 dbSNP
rs1330985699 2676 dbSNP
rs1338716672 2678 dbSNP
rs1204201106 2679 dbSNP
rs1414233482 2685 dbSNP
rs1292639338 2686 dbSNP
rs1350885933 2690 dbSNP
rs573240532 2691 dbSNP
rs1234928866 2693 dbSNP
rs754467992 2696 dbSNP
rs891832242 2701 dbSNP
rs1041515805 2702 dbSNP
rs1008319074 2709 dbSNP
rs1195958839 2711 dbSNP
rs564625902 2715 dbSNP
rs889921349 2727 dbSNP
rs903991891 2728 dbSNP
rs1258892604 2731 dbSNP
rs1416540910 2744 dbSNP
rs1042534479 2747 dbSNP
rs945125930 2752 dbSNP
rs546006866 2753 dbSNP
rs12459546 2758 dbSNP
rs920164536 2762 dbSNP
rs1163022484 2765 dbSNP
rs937955299 2786 dbSNP
rs1418656503 2787 dbSNP
rs1313506707 2789 dbSNP
rs1037311005 2790 dbSNP
rs556914895 2791 dbSNP
rs973991280 2791 dbSNP
rs1227876380 2792 dbSNP
rs535266225 2792 dbSNP
rs907568736 2794 dbSNP
rs1209563135 2797 dbSNP
rs189554662 2799 dbSNP
rs555433 2800 dbSNP
rs1486945198 2801 dbSNP
rs559913994 2801 dbSNP
rs1261624941 2805 dbSNP
rs1429552099 2821 dbSNP
rs1195751392 2832 dbSNP
rs1241920043 2838 dbSNP
rs1393525253 2842 dbSNP
rs1453959574 2860 dbSNP
rs1174344219 2864 dbSNP
rs1194300526 2869 dbSNP
rs141384119 2871 dbSNP
rs1287107524 2872 dbSNP
rs1269683824 2875 dbSNP
rs1211423542 2883 dbSNP
rs927099486 2886 dbSNP
rs78577468 2912 dbSNP
rs968545571 2914 dbSNP
rs1368374793 2919 dbSNP
rs1233029625 2926 dbSNP
rs1303522640 2931 dbSNP
rs552129299 2934 dbSNP
rs1349496893 2935 dbSNP
rs1273196097 2949 dbSNP
rs1236249963 2950 dbSNP
rs1260695872 2956 dbSNP
rs1030367163 2963 dbSNP
rs536781798 2973 dbSNP
rs1251450578 2979 dbSNP
rs976064148 2983 dbSNP
rs1194563821 2987 dbSNP
rs1181454138 2998 dbSNP
rs369254334 3001 dbSNP
rs569724573 3002 dbSNP
rs964684284 3005 dbSNP
rs1158443058 3016 dbSNP
rs1018286281 3019 dbSNP
rs1269489645 3022 dbSNP
rs1431265085 3027 dbSNP
rs1367072899 3029 dbSNP
rs1021492266 3030 dbSNP
rs1391945685 3032 dbSNP
rs1461055462 3033 dbSNP
rs1439877786 3040 dbSNP
rs1395325187 3049 dbSNP
rs78432689 3053 dbSNP
rs1001085538 3055 dbSNP
rs1408749446 3057 dbSNP
rs1010186240 3060 dbSNP
rs1305622048 3070 dbSNP
rs73614181 3073 dbSNP
rs372166093 3074 dbSNP
rs1008707291 3083 dbSNP
rs1334683385 3092 dbSNP
rs889888741 3095 dbSNP
rs140762206 3103 dbSNP
rs1467712471 3109 dbSNP
rs780284203 3111 dbSNP
rs184925089 3122 dbSNP
rs1038697805 3127 dbSNP
rs1272270631 3137 dbSNP
rs192151522 3141 dbSNP
rs908406736 3143 dbSNP
rs1344042146 3150 dbSNP
rs767315526 3151 dbSNP
rs1415579382 3152 dbSNP
rs763335917 3161 dbSNP
rs923369731 3163 dbSNP
rs372437594 3170 dbSNP
rs1351286121 3172 dbSNP
rs57430949 3174 dbSNP
rs71831660 3174 dbSNP
rs1297118919 3175 dbSNP
rs1371951940 3178 dbSNP
rs910549888 3187 dbSNP
rs1292017312 3189 dbSNP
rs1411118417 3189 dbSNP
rs1355355276 3194 dbSNP
rs1234305145 3200 dbSNP
rs980124962 3201 dbSNP
rs367956025 3215 dbSNP
rs369847259 3218 dbSNP
rs1204028214 3219 dbSNP
rs543701559 3228 dbSNP
rs1021563090 3234 dbSNP
rs1481697593 3243 dbSNP
rs1037681510 3244 dbSNP
rs1255381849 3246 dbSNP
rs940294453 3246 dbSNP
rs1393675481 3254 dbSNP
rs960830978 3254 dbSNP
rs1188394120 3256 dbSNP
rs1415620880 3256 dbSNP
rs1034737779 3257 dbSNP
rs1169386093 3263 dbSNP
rs1354718254 3268 dbSNP
rs1173357969 3269 dbSNP
rs907493491 3271 dbSNP
rs547285707 3281 dbSNP
rs1375409526 3283 dbSNP
rs71754010 3283 dbSNP
rs16422 3291 dbSNP
rs1395356022 3294 dbSNP
rs1286339818 3307 dbSNP
rs904898005 3316 dbSNP
rs1214347319 3320 dbSNP
rs1296612527 3329 dbSNP
rs1038034577 3332 dbSNP
rs189544679 3336 dbSNP
rs564355496 3346 dbSNP
rs1279613103 3348 dbSNP
rs938377823 3353 dbSNP
rs887013791 3356 dbSNP
rs781709381 3361 dbSNP
rs826285 3362 dbSNP
rs979860838 3367 dbSNP
rs1474324625 3369 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084065. RNA binding protein: AGO2. Condition:CLIP_emetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ugguuuccgucgggacCGUUga 5'
                          ||||  
Target 5' ------------cagaGCAAau 3'
1 - 10
2
miRNA  3' ugGUUUCCG-UCGGGACCGUUGa 5'
            ::|| |: :|   ||| ::: 
Target 5' cuUGAAUGUGGGAGGUGGAGGUu 3'
13 - 35
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084065
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_emetine_AbnovaAb
Location of target site ENST00000520965.1 | 3UTR | CAGAGCAAAUUGCUUGAAUGUGGGAGGUGGAGGUUGC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
167 hsa-miR-6501-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT156859 FAM126B family with sequence similarity 126 member B 2 2
MIRT173355 TP53INP1 tumor protein p53 inducible nuclear protein 1 2 2
MIRT369102 CHAC1 ChaC glutathione specific gamma-glutamylcyclotransferase 1 2 2
MIRT442037 TRPV2 transient receptor potential cation channel subfamily V member 2 2 2
MIRT442829 AZIN1 antizyme inhibitor 1 2 2
MIRT443729 CCND2 cyclin D2 2 2
MIRT453771 NUCB1 nucleobindin 1 2 10
MIRT453875 IFRD1 interferon related developmental regulator 1 2 12
MIRT454229 OSBPL10 oxysterol binding protein like 10 2 11
MIRT458829 RPUSD2 RNA pseudouridylate synthase domain containing 2 2 2
MIRT459898 PIGO phosphatidylinositol glycan anchor biosynthesis class O 2 10
MIRT464162 VMP1 vacuole membrane protein 1 2 15
MIRT495411 SMAD2 SMAD family member 2 2 2
MIRT496906 TRIM56 tripartite motif containing 56 2 2
MIRT498653 AP3B2 adaptor related protein complex 3 beta 2 subunit 2 6
MIRT498706 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 10
MIRT499308 ZNF485 zinc finger protein 485 2 6
MIRT499707 NFATC2IP nuclear factor of activated T-cells 2 interacting protein 2 10
MIRT499755 CIRH1A UTP4, small subunit processome component 2 6
MIRT499827 PCSK9 proprotein convertase subtilisin/kexin type 9 2 8
MIRT503691 MAVS mitochondrial antiviral signaling protein 2 2
MIRT512418 LAYN layilin 2 4
MIRT516232 RAB3B RAB3B, member RAS oncogene family 2 2
MIRT522554 MCAM melanoma cell adhesion molecule 2 4
MIRT523760 FBXO27 F-box protein 27 2 4
MIRT525107 PRKD2 protein kinase D2 2 2
MIRT525919 KIAA0391 KIAA0391 2 2
MIRT527246 COMMD6 COMM domain containing 6 2 2
MIRT527564 ADCY7 adenylate cyclase 7 2 2
MIRT528764 CD1D CD1d molecule 2 2
MIRT529362 YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta 2 4
MIRT529464 ZNF546 zinc finger protein 546 2 2
MIRT530676 CHRNB1 cholinergic receptor nicotinic beta 1 subunit 2 4
MIRT531635 C19orf52 translocase of inner mitochondrial membrane 29 2 4
MIRT531909 SLC4A1 solute carrier family 4 member 1 (Diego blood group) 2 2
MIRT532172 SEC14L5 SEC14 like lipid binding 5 2 4
MIRT534234 SLC25A16 solute carrier family 25 member 16 2 4
MIRT534561 RRAGD Ras related GTP binding D 2 2
MIRT534971 PSD3 pleckstrin and Sec7 domain containing 3 2 2
MIRT536738 HSPA4L heat shock protein family A (Hsp70) member 4 like 2 2
MIRT538544 CELF1 CUGBP Elav-like family member 1 2 2
MIRT540462 ZNF71 zinc finger protein 71 2 2
MIRT540554 PPIC peptidylprolyl isomerase C 2 2
MIRT543593 KIAA1549 KIAA1549 2 2
MIRT543963 RNF20 ring finger protein 20 2 2
MIRT544047 C9orf64 chromosome 9 open reading frame 64 2 2
MIRT544670 AP1S1 adaptor related protein complex 1 sigma 1 subunit 2 2
MIRT550665 TRAF1 TNF receptor associated factor 1 2 2
MIRT558540 CSNK1G3 casein kinase 1 gamma 3 2 4
MIRT574917 Vmp1 vacuole membrane protein 1 2 9
MIRT575298 Osbpl10 oxysterol binding protein-like 10 2 7
MIRT607960 SNX22 sorting nexin 22 2 2
MIRT610649 TIPRL TOR signaling pathway regulator 2 8
MIRT615899 GATAD1 GATA zinc finger domain containing 1 2 2
MIRT617438 CCS copper chaperone for superoxide dismutase 2 2
MIRT617510 C5orf45 MRN complex interacting protein 2 2
MIRT617548 MTO1 mitochondrial tRNA translation optimization 1 2 2
MIRT620565 WBSCR27 methyltransferase like 27 2 2
MIRT623166 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 2 2
MIRT624161 DGKE diacylglycerol kinase epsilon 2 2
MIRT626090 MKLN1 muskelin 1 2 2
MIRT627010 FIG4 FIG4 phosphoinositide 5-phosphatase 2 2
MIRT627073 SF3A1 splicing factor 3a subunit 1 2 2
MIRT627136 HS3ST1 heparan sulfate-glucosamine 3-sulfotransferase 1 2 2
MIRT627340 TSHZ2 teashirt zinc finger homeobox 2 2 2
MIRT627436 TAS2R5 taste 2 receptor member 5 2 2
MIRT628273 CYB5D1 cytochrome b5 domain containing 1 2 2
MIRT629091 F2RL1 F2R like trypsin receptor 1 2 4
MIRT629282 UNC13A unc-13 homolog A 2 2
MIRT630122 ARHGEF5 Rho guanine nucleotide exchange factor 5 2 2
MIRT630247 SMTNL2 smoothelin like 2 2 2
MIRT631260 CENPM centromere protein M 2 2
MIRT631336 CD300E CD300e molecule 2 2
MIRT631399 IL2RA interleukin 2 receptor subunit alpha 2 2
MIRT632593 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT632991 DUSP18 dual specificity phosphatase 18 2 2
MIRT633079 CXorf21 chromosome X open reading frame 21 2 2
MIRT634223 TMEM132B transmembrane protein 132B 2 2
MIRT635046 MYH11 myosin heavy chain 11 2 2
MIRT636444 LRCH3 leucine rich repeats and calponin homology domain containing 3 2 2
MIRT636649 CDK4 cyclin dependent kinase 4 2 2
MIRT637129 BAMBI BMP and activin membrane bound inhibitor 2 2
MIRT637282 IBA57 IBA57 homolog, iron-sulfur cluster assembly 2 2
MIRT637527 RGS9BP regulator of G protein signaling 9 binding protein 2 2
MIRT637783 OLA1 Obg like ATPase 1 2 2
MIRT637920 LILRA2 leukocyte immunoglobulin like receptor A2 2 2
MIRT638238 SLC1A5 solute carrier family 1 member 5 2 2
MIRT638444 PLXDC2 plexin domain containing 2 2 2
MIRT639765 GPR45 G protein-coupled receptor 45 2 2
MIRT640437 ERVMER34-1 endogenous retrovirus group MER34 member 1, envelope 2 2
MIRT643006 ZNF829 zinc finger protein 829 2 2
MIRT644233 SLC35E3 solute carrier family 35 member E3 2 2
MIRT644661 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT644957 ATP6AP1L ATPase H+ transporting accessory protein 1 like 2 2
MIRT645086 SLC35E2B solute carrier family 35 member E2B 2 2
MIRT645256 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT645861 GBP6 guanylate binding protein family member 6 2 2
MIRT645987 ACP6 acid phosphatase 6, lysophosphatidic 2 2
MIRT646502 FAM217B family with sequence similarity 217 member B 2 2
MIRT646811 COX19 COX19, cytochrome c oxidase assembly factor 2 2
MIRT647706 NFX1 nuclear transcription factor, X-box binding 1 2 2
MIRT649657 TEP1 telomerase associated protein 1 2 2
MIRT650550 YIPF4 Yip1 domain family member 4 2 2
MIRT650785 GSR glutathione-disulfide reductase 2 2
MIRT651461 XIAP X-linked inhibitor of apoptosis 2 2
MIRT652098 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT654117 RPS6KA5 ribosomal protein S6 kinase A5 2 2
MIRT658901 DPY19L4 dpy-19 like 4 2 2
MIRT659370 CREG2 cellular repressor of E1A stimulated genes 2 2 2
MIRT662537 MTAP methylthioadenosine phosphorylase 2 2
MIRT662617 MCM8 minichromosome maintenance 8 homologous recombination repair factor 2 2
MIRT663491 IYD iodotyrosine deiodinase 2 2
MIRT663899 MRI1 methylthioribose-1-phosphate isomerase 1 2 2
MIRT664552 MKI67IP nucleolar protein interacting with the FHA domain of MKI67 1 1
MIRT664582 HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 2 2
MIRT664953 PTCD3 pentatricopeptide repeat domain 3 2 2
MIRT665193 ESF1 ESF1 nucleolar pre-rRNA processing protein homolog 2 2
MIRT665446 WDR17 WD repeat domain 17 2 2
MIRT665894 TCEANC2 transcription elongation factor A N-terminal and central domain containing 2 2 2
MIRT666480 SBNO1 strawberry notch homolog 1 2 2
MIRT666514 RNF170 ring finger protein 170 2 2
MIRT666692 RBM23 RNA binding motif protein 23 2 2
MIRT666791 PSMD1 proteasome 26S subunit, non-ATPase 1 2 2
MIRT667453 MAPK14 mitogen-activated protein kinase 14 2 2
MIRT667553 LRAT lecithin retinol acyltransferase 2 4
MIRT667744 KDELR1 KDEL endoplasmic reticulum protein retention receptor 1 2 2
MIRT668080 GMEB1 glucocorticoid modulatory element binding protein 1 2 2
MIRT668114 GK5 glycerol kinase 5 (putative) 2 2
MIRT668501 ESYT2 extended synaptotagmin 2 2 2
MIRT668942 CNKSR3 CNKSR family member 3 2 2
MIRT670408 ELP2 elongator acetyltransferase complex subunit 2 2 2
MIRT671134 CD226 CD226 molecule 2 2
MIRT671919 PLEKHS1 pleckstrin homology domain containing S1 2 4
MIRT672287 GP2 glycoprotein 2 2 2
MIRT672427 POLR2D RNA polymerase II subunit D 2 2
MIRT672762 UBE2V2 ubiquitin conjugating enzyme E2 V2 2 2
MIRT672923 LRRC2 leucine rich repeat containing 2 2 2
MIRT673150 C1orf50 chromosome 1 open reading frame 50 2 2
MIRT673309 UBE2G2 ubiquitin conjugating enzyme E2 G2 2 2
MIRT673560 PLA2G16 phospholipase A2 group XVI 2 2
MIRT673895 DCTN6 dynactin subunit 6 2 2
MIRT674513 PRR23A proline rich 23A 2 2
MIRT674614 RBBP4 RB binding protein 4, chromatin remodeling factor 2 2
MIRT674747 SLC16A1 solute carrier family 16 member 1 2 2
MIRT675693 PIWIL1 piwi like RNA-mediated gene silencing 1 2 2
MIRT675890 SNAP29 synaptosome associated protein 29 2 2
MIRT685271 KIAA1143 KIAA1143 2 2
MIRT686057 KCNA7 potassium voltage-gated channel subfamily A member 7 2 2
MIRT693886 C3orf62 chromosome 3 open reading frame 62 2 2
MIRT695594 TMEM199 transmembrane protein 199 2 2
MIRT696592 ORMDL2 ORMDL sphingolipid biosynthesis regulator 2 2 2
MIRT698041 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT699907 RUNDC1 RUN domain containing 1 2 2
MIRT706608 CYB5B cytochrome b5 type B 2 2
MIRT706628 PNPT1 polyribonucleotide nucleotidyltransferase 1 2 2
MIRT706640 NCBP2 nuclear cap binding protein subunit 2 2 2
MIRT706676 COL13A1 collagen type XIII alpha 1 chain 2 2
MIRT706723 RFK riboflavin kinase 2 2
MIRT706857 MAFF MAF bZIP transcription factor F 2 2
MIRT706891 ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 2 2
MIRT706958 FANCC Fanconi anemia complementation group C 2 2
MIRT706976 XPO5 exportin 5 2 2
MIRT707010 RRP36 ribosomal RNA processing 36 2 2
MIRT707028 ACTR5 ARP5 actin related protein 5 homolog 2 2
MIRT707068 MED29 mediator complex subunit 29 2 2
MIRT713253 ZFP30 ZFP30 zinc finger protein 2 2
MIRT719130 NR2F6 nuclear receptor subfamily 2 group F member 6 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-6501 Ceritinib 57379345 NSC776422 approved sensitive High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-mir-6501 Ceritinib 57379345 NSC776422 approved sensitive cell line (H3122)
hsa-miR-6501-5p Ceritinib 57379345 NSC776422 approved sensitive High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-miR-6501-5p Gefitinib 123631 NSC715055 approved resistant cell line (PC9)
hsa-miR-6501-5p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-6501-5p Osimertinib 71496458 NSC779217 approved sensitive cell line (HCC827)
hsa-miR-6501-5p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-6501-5p Vemurafenib 42611257 NSC761431 approved sensitive cell line (451Lu)
hsa-miR-6501-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-6501-5p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-6501-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-miR-6501-5p Ceritinib 57379345 NSC776422 approved sensitive cell line (H3122)

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