pre-miRNA Information
pre-miRNA hsa-mir-6752   
Genomic Coordinates chr11: 67490245 - 67490315
Description Homo sapiens miR-6752 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6752-3p
Sequence 51| UCCCUGCCCCCAUACUCCCAG |71
Evidence Experimental
Experiments Meta-analysis
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs760443460 2 dbSNP
rs746450218 4 dbSNP
rs897972135 4 dbSNP
rs766020814 10 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol TMEM151B   
Synonyms C6orf137, TMEM193, bA444E17.5
Description transmembrane protein 151B
Transcript NM_001137560   
Expression
Putative miRNA Targets on TMEM151B
3'UTR of TMEM151B
(miRNA target sites are highlighted)
>TMEM151B|NM_001137560|3'UTR
   1 CCTCCGGCCCCGGAGTGGCCCGCGCCGTCCTCCCGCCTGCCCCTCGCCGGACTGTGCTCCCTCTGCGACGCAGGGCGAGT
  81 CACCACGGTGACTGAGGCCGCGCGGGGGGCAGGGAAAGGGAGGTGAGGGCCGCAAGACAGGCCCGGATGGGGCCGAGACC
 161 CCCGCTGTCCCTGTACATAAAGAGACCGATGGGTGGGAGGGGGTCGGCTGCTCCCCGAGATCCCCCTGGCAGAGTCATTC
 241 TTCCAGCCCCAACCCTGAGTTCCTAAAGGGACACCTCCCTCCTGTCCAGCCCTTCAACAGATCTTCTGTTAGATGACAAC
 321 CGTGCCGTGGGCCCCGCGTTGGGCCTTGTCTGAAGGGAGAGGCCCTGGCATGCGGATGGGAGATTTAGAGGCTGTGGAGA
 401 AGGGAACTTGGGGCTTTCCTTCCTTCGTGGCCTCACTCCCCTGGGGCCTCTCTCTATGGAGGGGGCAATGGTTTGGTGAC
 481 CAGCAGGCTGGATTCCAACTAGCTAATGCATTCAGCAGGTCTGAGGCTGGGGCCAGGTGTCAGCCCTAGGCCTCCATCCA
 561 ACACCGTGGAAATGTTGCTGCCCTCTTCTTGGCGCTGACCCCAAGATTGGGGTTTCCTTTCTGCCGCTCCCTCCACTGTT
 641 GTTTATCTAACTGGGCCCCCACTCCAGGTCCAGAGGGACTGTGCTCACTGCACAGACATCACTCACCTTCCGCTCCCCAG
 721 TCCTGCAGAGCTGTTGCCAGGGTGCAGTGGGGAGGGGAGTGAAATGTGGAGGACTGTGTACCTCAGTCCTCTCTCTAAAC
 801 TCCTCAGCCTCCCAACAGGGGCCTCCTCACCTGGGTTCTGAGTGTATACCCCTTTTAGAGAGTGAGATGCCACCCGGGCA
 881 GCACTCGTTAAAGCTGGCCAGCACGAGTGACTAAGGGGAGAGAGCATGACATAGACCTGGGTGGCAACGGGGACCTCTGG
 961 AAGCAGGTGGGAGTAAGAGAGGAGAGGGCAGTGGAGGGTAGAGGAAAAGGACCTCCAGAGGTGGGGTGTCTGTGGGGGCG
1041 GCCTTTGCCTCCCTAAACCTGTGCGGAGGAGTGGAGTGTGCTTGTCGCTCAAACACATCTCTGGGGGACTGAGGACGTTG
1121 TCACAAGCCCCAACTGGAGAAATAATTCCAATGGCAGGGTCAGAGGCAAGCATTCTCTAAATCTTGCCCAACCCTTCCAT
1201 CCTTCCCTATCCTATGAGCTGAAGCCCTGCTGTGTGTCGCAGGGTCTTCAAAGGGGCATCCTGCCACCACCCCAGGGCGC
1281 TGGCCCCACGTCCTGTTCCCCTAAAGCTCTGACACCGCCTTCTCTCCGTGTGCTCCCCCCACCACCTCCACCCTGATGTG
1361 CTTCAGTGTGCATGTCTGTGAACAGCCCTCCTGCCCTGCCAACTCCCCTGGCTAAAGTCTCCCCAGCAGATTTAGCACCC
1441 AGGGATTGAGCTCACATTTCAGGCTAGAGAGGATAACCCTTGGGCCACCCACATCTCTCACCCCTGATGCTTCTTACTTC
1521 GCCTGAGCCATCAGAACTCCTCCTTACCCTCCTTCAGCCCCTCTCATCTTCCTTCAGCCCAGCCAGGCCTGCACCACCAA
1601 CTGTGTGGCCTCCACCTATGCAACATCGCCTCTGGCTCCCCTTCCCTTCTTCCTAGCGGGGAGTGCGAGGGGCCCAAATT
1681 GTGGGGATACCATGGCCCATGGCTTCTAAAGGGTTTAGCTTTACTTTCAGGTAGAGATGGCTGAGTGAGGAGGGAGAAGA
1761 GGCTAGAGAGAGGGAGGCTTGGGCAGGGGAAACAGCTGCCCACCAGGTTTTCCTGGACAGCAGTGCCCACCTGCCTACTA
1841 GCACTGAACCTGCCTGGACCCTGAGTCTGTGCTCCTTGGGGGCCTGGCGTTTGGAGCACCCTTCTTTCCTCTGAATGGAC
1921 ATCTGTGAGGTACAGGTGGTGAGCTGCAGCCTCAGGCTCCATTTCTTAGCCAGCTGGCACCTGGATGTCATGCTTTGTGT
2001 GGGGACAGCCTGGCCACCTCAGGGCTCCAAGGAAGGAGGAACGTGGCTCCTCCTCCCTCAGGCCTGTTCCTGAGACAGAG
2081 CCTGGTCTCACAAGAGGGGAAGGGGGACCTCTATTATTATTTTTGCCTGTATTGACCATTTCTGCCTAGGTCGTCTCAGA
2161 CAGCCTCATCTCCCACACATGCACAGACTTAGAGAGAAACCAATTCTTTGGTCTATTTTCTTGGTAGCTTTACTGATTGC
2241 CAGGGAAAATGAAAACCAGAAAATTAATTAATCTCTAAAATTAAACTTTACACTGAATGTTCTTGTTTCTCTAATTAGAA
2321 CTTCTGCTAGCAGCTGTGGCTATACACACACACACACACACACACACCCTCACACCTACACGTTTGCACTCCGGAACTGT
2401 CAGAGGGTGTCAGGCACAGACAGACTCTAGGTTGCCTAGACAGGCACACACATGCAGTCACTCCCAAGCCCCCTTTGGTG
2481 CTCTGCTCAGCGCCTGCTTAGCGGAAGGAGTCCCTGGAGAGCAGGCACTCCTGGACTGGGGTTGTAGCCCATGACCTGCC
2561 CTTTGGGGACACAGTTCTGGAGGCTCTGGGCCAATGAATCAGCCCAAGGAGGATGGGCAATGGCGCTCAGCCTGAATCAG
2641 TCAGCTAGGTCTCTTGTGGCCCTGGGGGCTGATGTGATTCCTGTAGGTGTGGCCCCAGGGTGGACAGCTACAGAGTGATG
2721 GGGGACTCATGTAGGGCACCTGGAAGGCTCCATGTGTCCTGGGGACAAGGGCTTGTGGGGTGGGCTGGGCCTGGCTGGGG
2801 AGAAGACAGGTCTCTGTCAATTGGGTGCATCACACTGTGGCCTTTTTGTCGTGGATTTAAGCGCAAAGATTGTACAAATC
2881 AAACTGGTGGATAATAAAGTCGTGGATGACTCACTGACAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' gaCCCUCAUACCCCCGUCCCu 5'
            |||||  |  |||||||| 
Target 5' gaGGGAGGCT-TGGGCAGGGg 3'
1770 - 1789 158.00 -27.60
2
miRNA  3' gacccucauaCCCCCGUCCCu 5'
                    |||||||||| 
Target 5' aggccgcgcgGGGGGCAGGGa 3'
95 - 115 155.00 -26.42
3
miRNA  3' gacccucauacccCCGUCCCu 5'
                       ||||||| 
Target 5' aaataattccaatGGCAGGGt 3'
1140 - 1160 140.00 -13.40
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31659426 82 COSMIC
COSN19228665 183 COSMIC
COSN19113707 279 COSMIC
COSN7790677 329 COSMIC
COSN15662806 339 COSMIC
COSN19281768 402 COSMIC
COSN6321323 432 COSMIC
COSN21929622 705 COSMIC
COSN5630514 729 COSMIC
COSN25110966 822 COSMIC
COSN21850441 850 COSMIC
COSN27572370 888 COSMIC
COSN24354546 919 COSMIC
COSN31962629 959 COSMIC
COSN20357615 1059 COSMIC
COSN2162802 1066 COSMIC
COSN24449113 1088 COSMIC
COSN28670296 1440 COSMIC
COSN31518118 1522 COSMIC
COSN26564664 1606 COSMIC
COSN20075481 1664 COSMIC
COSN22098678 1682 COSMIC
COSN28861197 1728 COSMIC
COSN26638766 1753 COSMIC
COSN1333548 1779 COSMIC
COSN19672243 1786 COSMIC
COSN5811011 1906 COSMIC
COSN21475796 2032 COSMIC
COSN29104538 2104 COSMIC
COSN20102872 2368 COSMIC
COSN27402862 2401 COSMIC
COSN23228985 2471 COSMIC
COSN21463286 2474 COSMIC
COSN7790678 2492 COSMIC
COSN22041630 2545 COSMIC
COSN19506631 2623 COSMIC
COSN18876436 2800 COSMIC
rs1044690 978 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1242837330 1 dbSNP
rs1356090618 5 dbSNP
rs184276913 8 dbSNP
rs1487451713 9 dbSNP
rs1290704159 12 dbSNP
rs748057109 13 dbSNP
rs1287647918 18 dbSNP
rs1359891980 23 dbSNP
rs1224552787 24 dbSNP
rs1265362202 25 dbSNP
rs772031069 26 dbSNP
rs1480306102 28 dbSNP
rs991189422 29 dbSNP
rs919702366 30 dbSNP
rs1177242259 37 dbSNP
rs931029365 38 dbSNP
rs1442353078 46 dbSNP
rs1405942314 47 dbSNP
rs1349735235 50 dbSNP
rs1163110119 55 dbSNP
rs1412183529 61 dbSNP
rs916593364 69 dbSNP
rs145096356 75 dbSNP
rs1167438258 77 dbSNP
rs1413922407 78 dbSNP
rs1476852270 79 dbSNP
rs984821703 87 dbSNP
rs889609687 99 dbSNP
rs1271339723 101 dbSNP
rs779093225 103 dbSNP
rs1285031056 104 dbSNP
rs1490246899 104 dbSNP
rs1244823294 108 dbSNP
rs1206319988 109 dbSNP
rs907993799 110 dbSNP
rs1156563778 111 dbSNP
rs1386870054 113 dbSNP
rs1324981206 114 dbSNP
rs940853201 123 dbSNP
rs1321794504 132 dbSNP
rs1222582987 134 dbSNP
rs1365019332 146 dbSNP
rs1359034126 153 dbSNP
rs1040558103 156 dbSNP
rs1355652136 160 dbSNP
rs1331199457 162 dbSNP
rs1446468646 166 dbSNP
rs569855739 170 dbSNP
rs746361811 172 dbSNP
rs567867680 179 dbSNP
rs371436318 180 dbSNP
rs1491082704 181 dbSNP
rs1032287126 183 dbSNP
rs1178751186 185 dbSNP
rs893931811 189 dbSNP
rs1232237578 201 dbSNP
rs1196741239 202 dbSNP
rs548321933 203 dbSNP
rs1263270775 212 dbSNP
rs138882078 221 dbSNP
rs1310109688 226 dbSNP
rs1050488206 230 dbSNP
rs1225849847 239 dbSNP
rs892823877 248 dbSNP
rs1308987107 249 dbSNP
rs1011272538 258 dbSNP
rs1408912460 263 dbSNP
rs1337506657 268 dbSNP
rs867880483 271 dbSNP
rs1465564663 273 dbSNP
rs774576463 276 dbSNP
rs1228714597 280 dbSNP
rs1041477137 293 dbSNP
rs1379515965 296 dbSNP
rs1277656597 299 dbSNP
rs1176517079 302 dbSNP
rs1440584777 305 dbSNP
rs1212177577 316 dbSNP
rs1446409284 318 dbSNP
rs142002674 320 dbSNP
rs1202512844 322 dbSNP
rs540666033 327 dbSNP
rs1002706702 329 dbSNP
rs146304064 334 dbSNP
rs985173251 336 dbSNP
rs530847073 337 dbSNP
rs170510 339 dbSNP
rs553211537 345 dbSNP
rs1472722100 353 dbSNP
rs1316274955 354 dbSNP
rs577934109 358 dbSNP
rs1377151741 359 dbSNP
rs1424947662 362 dbSNP
rs1290692867 363 dbSNP
rs1454544765 370 dbSNP
rs545079187 374 dbSNP
rs1336775974 375 dbSNP
rs1385805942 386 dbSNP
rs902453206 386 dbSNP
rs1186673364 391 dbSNP
rs935247794 392 dbSNP
rs1376116532 393 dbSNP
rs1409363321 394 dbSNP
rs1053748664 395 dbSNP
rs200628417 396 dbSNP
rs1306396417 408 dbSNP
rs1485363680 409 dbSNP
rs563957095 411 dbSNP
rs1214924507 417 dbSNP
rs893774698 418 dbSNP
rs1410697511 420 dbSNP
rs753345971 420 dbSNP
rs1320419024 421 dbSNP
rs1024118288 437 dbSNP
rs1273974894 439 dbSNP
rs1342668091 441 dbSNP
rs907961214 442 dbSNP
rs1382804496 444 dbSNP
rs148520848 447 dbSNP
rs1296521970 448 dbSNP
rs976184581 451 dbSNP
rs923475624 453 dbSNP
rs1162421232 455 dbSNP
rs1456375048 458 dbSNP
rs759064069 461 dbSNP
rs1279328264 463 dbSNP
rs1340827293 465 dbSNP
rs1202334930 471 dbSNP
rs200951822 473 dbSNP
rs1253351227 477 dbSNP
rs1201217426 481 dbSNP
rs911472650 482 dbSNP
rs543379628 489 dbSNP
rs1268553130 494 dbSNP
rs932203936 494 dbSNP
rs1209581632 499 dbSNP
rs141836662 504 dbSNP
rs1253543787 509 dbSNP
rs1228267592 515 dbSNP
rs1317306191 518 dbSNP
rs973642136 519 dbSNP
rs1276382560 527 dbSNP
rs914838529 533 dbSNP
rs1246468742 537 dbSNP
rs1322698464 540 dbSNP
rs528720453 545 dbSNP
rs1398563123 549 dbSNP
rs1041444448 555 dbSNP
rs1298611189 566 dbSNP
rs547436663 572 dbSNP
rs1420912480 574 dbSNP
rs902895923 592 dbSNP
rs1177934668 594 dbSNP
rs1002631762 595 dbSNP
rs1480581032 596 dbSNP
rs1376672948 600 dbSNP
rs1198619875 606 dbSNP
rs1431749695 619 dbSNP
rs1253297749 624 dbSNP
rs1199901973 626 dbSNP
rs985225145 632 dbSNP
rs1057339878 636 dbSNP
rs1205610469 637 dbSNP
rs1396275323 637 dbSNP
rs894289709 641 dbSNP
rs1274436787 650 dbSNP
rs1429675538 660 dbSNP
rs1230797889 663 dbSNP
rs1166747704 667 dbSNP
rs910933375 682 dbSNP
rs1446009760 685 dbSNP
rs1397981613 688 dbSNP
rs1338165869 691 dbSNP
rs1469819324 696 dbSNP
rs16871694 707 dbSNP
rs1323185272 712 dbSNP
rs532894598 713 dbSNP
rs1329130555 719 dbSNP
rs1438415023 720 dbSNP
rs977030588 727 dbSNP
rs1439665973 730 dbSNP
rs1026895397 738 dbSNP
rs952669364 742 dbSNP
rs551087838 747 dbSNP
rs1303893297 749 dbSNP
rs1277997247 764 dbSNP
rs1199004699 766 dbSNP
rs552040394 777 dbSNP
rs1286521299 779 dbSNP
rs150807976 782 dbSNP
rs1374594511 783 dbSNP
rs1316999134 789 dbSNP
rs565931061 800 dbSNP
rs976158297 804 dbSNP
rs776288282 809 dbSNP
rs1276102468 816 dbSNP
rs1339440180 817 dbSNP
rs1331610015 820 dbSNP
rs1402138212 821 dbSNP
rs1342303358 826 dbSNP
rs1053593986 842 dbSNP
rs1419430134 846 dbSNP
rs325020 847 dbSNP
rs1166090578 848 dbSNP
rs953560989 850 dbSNP
rs948031593 851 dbSNP
rs1450229531 854 dbSNP
rs1231985083 868 dbSNP
rs764637241 871 dbSNP
rs1237025186 874 dbSNP
rs752459185 875 dbSNP
rs758011157 876 dbSNP
rs1448984410 877 dbSNP
rs115097744 887 dbSNP
rs1254049590 888 dbSNP
rs114033603 894 dbSNP
rs553390227 905 dbSNP
rs578033991 909 dbSNP
rs1392079282 910 dbSNP
rs1281965858 915 dbSNP
rs1036971492 918 dbSNP
rs897960017 919 dbSNP
rs1340770054 924 dbSNP
rs139189502 932 dbSNP
rs1027884347 936 dbSNP
rs1359092659 938 dbSNP
rs1165834923 940 dbSNP
rs1162887489 945 dbSNP
rs1406499950 946 dbSNP
rs554741790 949 dbSNP
rs1161554733 950 dbSNP
rs79252063 951 dbSNP
rs948577757 953 dbSNP
rs1048703506 964 dbSNP
rs1270845524 970 dbSNP
rs1221994424 975 dbSNP
rs888328782 976 dbSNP
rs1044690 978 dbSNP
rs1215829742 983 dbSNP
rs151022893 989 dbSNP
rs865897232 997 dbSNP
rs923773362 998 dbSNP
rs1216465600 1000 dbSNP
rs1346970189 1011 dbSNP
rs1295683675 1013 dbSNP
rs1437567130 1020 dbSNP
rs543316768 1021 dbSNP
rs561585472 1022 dbSNP
rs1326489696 1023 dbSNP
rs1243512294 1027 dbSNP
rs186798147 1030 dbSNP
rs997956462 1034 dbSNP
rs989372583 1040 dbSNP
rs1357970807 1041 dbSNP
rs1030410429 1050 dbSNP
rs540475739 1052 dbSNP
rs915189244 1059 dbSNP
rs325019 1060 dbSNP
rs1206621495 1061 dbSNP
rs1022220160 1063 dbSNP
rs1045509873 1065 dbSNP
rs781120301 1066 dbSNP
rs1250518181 1069 dbSNP
rs1429634481 1072 dbSNP
rs968930166 1078 dbSNP
rs1186859744 1081 dbSNP
rs1325266690 1085 dbSNP
rs977688720 1087 dbSNP
rs924885692 1088 dbSNP
rs1346666572 1093 dbSNP
rs145257112 1098 dbSNP
rs1410922557 1106 dbSNP
rs898013798 1112 dbSNP
rs116424959 1117 dbSNP
rs76436585 1118 dbSNP
rs948481720 1120 dbSNP
rs1361129762 1121 dbSNP
rs1007801997 1135 dbSNP
rs1414119453 1146 dbSNP
rs1018366424 1153 dbSNP
rs1395392447 1159 dbSNP
rs1178692604 1162 dbSNP
rs1331582103 1166 dbSNP
rs367624208 1188 dbSNP
rs1176251521 1203 dbSNP
rs1237439807 1203 dbSNP
rs1462211671 1209 dbSNP
rs998363693 1215 dbSNP
rs373050014 1217 dbSNP
rs1048196606 1220 dbSNP
rs768840731 1225 dbSNP
rs1030680937 1230 dbSNP
rs577424177 1237 dbSNP
rs1036898877 1239 dbSNP
rs546477592 1240 dbSNP
rs1309097713 1260 dbSNP
rs773974892 1265 dbSNP
rs1226873246 1266 dbSNP
rs548829194 1269 dbSNP
rs1447624298 1275 dbSNP
rs567230548 1279 dbSNP
rs1008069500 1280 dbSNP
rs534765984 1281 dbSNP
rs1420019622 1287 dbSNP
rs939342668 1290 dbSNP
rs919370126 1291 dbSNP
rs759423469 1298 dbSNP
rs1180743557 1301 dbSNP
rs1049292552 1308 dbSNP
rs1021778338 1317 dbSNP
rs546472892 1318 dbSNP
rs1285750339 1325 dbSNP
rs773743271 1328 dbSNP
rs571456008 1329 dbSNP
rs1227762648 1330 dbSNP
rs761053853 1331 dbSNP
rs1300197346 1333 dbSNP
rs1400829023 1334 dbSNP
rs1359726385 1335 dbSNP
rs758287774 1335 dbSNP
rs1459419232 1336 dbSNP
rs960570556 1341 dbSNP
rs1465460860 1343 dbSNP
rs1368947433 1349 dbSNP
rs992471493 1354 dbSNP
rs1170802497 1360 dbSNP
rs1030608758 1361 dbSNP
rs571513534 1365 dbSNP
rs538738627 1367 dbSNP
rs915573295 1379 dbSNP
rs948471964 1383 dbSNP
rs1306879034 1397 dbSNP
rs984257590 1400 dbSNP
rs1262983595 1403 dbSNP
rs1411303483 1409 dbSNP
rs557514196 1413 dbSNP
rs1317940072 1425 dbSNP
rs1214851316 1439 dbSNP
rs1489766254 1443 dbSNP
rs553147551 1449 dbSNP
rs909666660 1450 dbSNP
rs575677602 1455 dbSNP
rs1280153947 1477 dbSNP
rs1254819567 1479 dbSNP
rs1340087747 1481 dbSNP
rs147605886 1482 dbSNP
rs1036866481 1486 dbSNP
rs1211600717 1486 dbSNP
rs567157656 1487 dbSNP
rs922486063 1488 dbSNP
rs1251185057 1489 dbSNP
rs933910280 1494 dbSNP
rs375215180 1496 dbSNP
rs1477308394 1500 dbSNP
rs1420957218 1504 dbSNP
rs981114116 1507 dbSNP
rs1191503257 1510 dbSNP
rs1435207368 1513 dbSNP
rs538936665 1514 dbSNP
rs1432445312 1518 dbSNP
rs140412449 1521 dbSNP
rs960894772 1522 dbSNP
rs1007583020 1530 dbSNP
rs1379231743 1536 dbSNP
rs1199308706 1537 dbSNP
rs1317546227 1538 dbSNP
rs1043154064 1540 dbSNP
rs1256336283 1543 dbSNP
rs904645936 1545 dbSNP
rs972113688 1555 dbSNP
rs1331535179 1564 dbSNP
rs1435279145 1569 dbSNP
rs760960460 1570 dbSNP
rs1300317297 1583 dbSNP
rs998984881 1584 dbSNP
rs1378986502 1593 dbSNP
rs1167364202 1599 dbSNP
rs1031850727 1603 dbSNP
rs1464595686 1606 dbSNP
rs1431220992 1616 dbSNP
rs960288535 1619 dbSNP
rs1014936434 1623 dbSNP
rs1397677943 1626 dbSNP
rs1174036681 1628 dbSNP
rs1023239044 1629 dbSNP
rs930722884 1647 dbSNP
rs1298439046 1656 dbSNP
rs984834870 1657 dbSNP
rs1374492487 1658 dbSNP
rs1386627669 1659 dbSNP
rs868335846 1661 dbSNP
rs540962113 1664 dbSNP
rs325018 1667 dbSNP
rs983786349 1668 dbSNP
rs1202459673 1669 dbSNP
rs1345952493 1671 dbSNP
rs909635681 1674 dbSNP
rs1255236211 1675 dbSNP
rs1231740286 1677 dbSNP
rs1235692966 1679 dbSNP
rs1309805898 1681 dbSNP
rs943523341 1700 dbSNP
rs577396064 1702 dbSNP
rs1335589539 1715 dbSNP
rs1396287419 1724 dbSNP
rs972507779 1725 dbSNP
rs1040930991 1730 dbSNP
rs902118967 1730 dbSNP
rs1433187375 1733 dbSNP
rs922453225 1739 dbSNP
rs1159857718 1745 dbSNP
rs191760775 1751 dbSNP
rs1231302194 1756 dbSNP
rs1206878215 1759 dbSNP
rs1189673162 1764 dbSNP
rs933901576 1774 dbSNP
rs1443246806 1778 dbSNP
rs77921689 1783 dbSNP
rs892095007 1785 dbSNP
rs325017 1786 dbSNP
rs1207786972 1795 dbSNP
rs943361633 1801 dbSNP
rs1043081234 1804 dbSNP
rs905037012 1805 dbSNP
rs1187894655 1806 dbSNP
rs1339524071 1813 dbSNP
rs1331719469 1815 dbSNP
rs1002071047 1817 dbSNP
rs375675243 1823 dbSNP
rs1362911022 1827 dbSNP
rs542216673 1828 dbSNP
rs1450853436 1829 dbSNP
rs1299164542 1832 dbSNP
rs1170703736 1836 dbSNP
rs1406374695 1839 dbSNP
rs1035247679 1844 dbSNP
rs1473128022 1873 dbSNP
rs1367960093 1875 dbSNP
rs998950809 1880 dbSNP
rs1489378804 1884 dbSNP
rs560593612 1888 dbSNP
rs971941192 1889 dbSNP
rs75491776 1890 dbSNP
rs1291869569 1892 dbSNP
rs1209922039 1897 dbSNP
rs1355122137 1898 dbSNP
rs1290895028 1900 dbSNP
rs1014451749 1913 dbSNP
rs145510421 1916 dbSNP
rs984887299 1921 dbSNP
rs970376053 1924 dbSNP
rs1397176703 1939 dbSNP
rs910667607 1941 dbSNP
rs1343952192 1942 dbSNP
rs1326190854 1955 dbSNP
rs965140884 1960 dbSNP
rs976318941 1981 dbSNP
rs1162837147 1983 dbSNP
rs1478940971 1983 dbSNP
rs1424540669 1988 dbSNP
rs1005139118 1993 dbSNP
rs554772164 1997 dbSNP
rs923423182 1998 dbSNP
rs1442258633 2000 dbSNP
rs1199571091 2002 dbSNP
rs1270771289 2004 dbSNP
rs1450942753 2004 dbSNP
rs1199940012 2005 dbSNP
rs1297593605 2006 dbSNP
rs1318184328 2015 dbSNP
rs1256951860 2019 dbSNP
rs1363114686 2022 dbSNP
rs1212435743 2028 dbSNP
rs1360386218 2030 dbSNP
rs934935428 2031 dbSNP
rs1437851536 2033 dbSNP
rs1053259967 2042 dbSNP
rs1016564407 2043 dbSNP
rs1321297496 2044 dbSNP
rs184306922 2053 dbSNP
rs1043360148 2054 dbSNP
rs972475146 2056 dbSNP
rs752177549 2067 dbSNP
rs1468786756 2068 dbSNP
rs1427065337 2071 dbSNP
rs1191527481 2072 dbSNP
rs536701252 2079 dbSNP
rs904963873 2082 dbSNP
rs532354454 2090 dbSNP
rs762613269 2091 dbSNP
rs955371713 2097 dbSNP
rs1002359513 2102 dbSNP
rs1237016520 2109 dbSNP
rs551056305 2112 dbSNP
rs1313552435 2121 dbSNP
rs1234261043 2122 dbSNP
rs1220128532 2124 dbSNP
rs569377346 2128 dbSNP
rs896270248 2133 dbSNP
rs530927627 2135 dbSNP
rs946623375 2149 dbSNP
rs1026208517 2150 dbSNP
rs115850297 2153 dbSNP
rs1006252041 2154 dbSNP
rs554993571 2155 dbSNP
rs1361075017 2162 dbSNP
rs1420462443 2171 dbSNP
rs925960311 2177 dbSNP
rs934669456 2180 dbSNP
rs1053179040 2184 dbSNP
rs1440208017 2186 dbSNP
rs895933390 2196 dbSNP
rs1320316551 2200 dbSNP
rs1379194345 2202 dbSNP
rs750532004 2205 dbSNP
rs1174930647 2206 dbSNP
rs964860812 2207 dbSNP
rs1237634258 2210 dbSNP
rs1211267725 2211 dbSNP
rs1485589080 2212 dbSNP
rs950263281 2216 dbSNP
rs1433530091 2221 dbSNP
rs1243013853 2224 dbSNP
rs1347704840 2227 dbSNP
rs923464356 2229 dbSNP
rs1306433651 2245 dbSNP
rs1222099678 2249 dbSNP
rs1381639308 2251 dbSNP
rs544239813 2260 dbSNP
rs956182709 2260 dbSNP
rs751542720 2262 dbSNP
rs906076760 2266 dbSNP
rs1420259864 2267 dbSNP
rs1005772301 2271 dbSNP
rs1156332669 2274 dbSNP
rs1424972384 2275 dbSNP
rs1413879323 2278 dbSNP
rs1186854585 2296 dbSNP
rs1474009206 2300 dbSNP
rs200316243 2303 dbSNP
rs752425508 2303 dbSNP
rs1488918459 2312 dbSNP
rs1016531547 2314 dbSNP
rs1226798737 2316 dbSNP
rs896809688 2322 dbSNP
rs1043437954 2325 dbSNP
rs1227483349 2327 dbSNP
rs1266017856 2331 dbSNP
rs1318600298 2334 dbSNP
rs926273807 2337 dbSNP
rs937777904 2341 dbSNP
rs757205408 2342 dbSNP
rs1185334439 2344 dbSNP
rs1261466993 2344 dbSNP
rs1271665901 2344 dbSNP
rs201660339 2344 dbSNP
rs56308139 2344 dbSNP
rs1489734388 2346 dbSNP
rs145749435 2352 dbSNP
rs1266138793 2355 dbSNP
rs1056592850 2358 dbSNP
rs66637794 2358 dbSNP
rs896333782 2363 dbSNP
rs1482024537 2365 dbSNP
rs1260162116 2367 dbSNP
rs1368164693 2367 dbSNP
rs397770041 2368 dbSNP
rs1029823806 2369 dbSNP
rs869086892 2369 dbSNP
rs1438012131 2376 dbSNP
rs35458212 2377 dbSNP
rs566892767 2382 dbSNP
rs1158826944 2383 dbSNP
rs1006137394 2385 dbSNP
rs1406284021 2387 dbSNP
rs1372905337 2392 dbSNP
rs374281531 2393 dbSNP
rs985662819 2394 dbSNP
rs1018119365 2401 dbSNP
rs1193091950 2408 dbSNP
rs558610851 2412 dbSNP
rs1017615576 2422 dbSNP
rs1240086612 2426 dbSNP
rs1196652279 2428 dbSNP
rs1338950085 2447 dbSNP
rs1160534357 2452 dbSNP
rs372066550 2455 dbSNP
rs965029773 2462 dbSNP
rs967931650 2469 dbSNP
rs1302509261 2470 dbSNP
rs1314842434 2473 dbSNP
rs1331394349 2477 dbSNP
rs1378552717 2477 dbSNP
rs756991369 2482 dbSNP
rs534204069 2484 dbSNP
rs1393804151 2488 dbSNP
rs1296819519 2492 dbSNP
rs559223932 2493 dbSNP
rs934638826 2494 dbSNP
rs988869127 2498 dbSNP
rs12943 2503 dbSNP
rs950173490 2504 dbSNP
rs988961014 2513 dbSNP
rs1224263289 2517 dbSNP
rs1200108428 2518 dbSNP
rs1437489489 2528 dbSNP
rs1277917421 2529 dbSNP
rs544409109 2533 dbSNP
rs1201972172 2540 dbSNP
rs1485916329 2541 dbSNP
rs906059870 2551 dbSNP
rs373298967 2553 dbSNP
rs1355712793 2556 dbSNP
rs574988087 2562 dbSNP
rs1482502071 2567 dbSNP
rs376590828 2581 dbSNP
rs1237631437 2585 dbSNP
rs1179620535 2586 dbSNP
rs1314514707 2595 dbSNP
rs1396236182 2596 dbSNP
rs750443016 2602 dbSNP
rs1231510445 2604 dbSNP
rs560527804 2609 dbSNP
rs897446829 2612 dbSNP
rs755974824 2616 dbSNP
rs993755348 2621 dbSNP
rs1178276027 2625 dbSNP
rs116737718 2626 dbSNP
rs1433414868 2628 dbSNP
rs1469634831 2629 dbSNP
rs1362134469 2631 dbSNP
rs45542637 2634 dbSNP
rs890841569 2636 dbSNP
rs1376173261 2641 dbSNP
rs540124980 2650 dbSNP
rs1475647444 2654 dbSNP
rs1429309295 2669 dbSNP
rs1006659080 2671 dbSNP
rs1018463064 2678 dbSNP
rs967858061 2679 dbSNP
rs937645709 2694 dbSNP
rs1489235683 2699 dbSNP
rs1327158231 2706 dbSNP
rs1284782514 2708 dbSNP
rs571974344 2710 dbSNP
rs747325792 2714 dbSNP
rs1347996667 2718 dbSNP
rs779099257 2720 dbSNP
rs1030918236 2725 dbSNP
rs956614075 2731 dbSNP
rs143437616 2733 dbSNP
rs1413260778 2737 dbSNP
rs917271894 2738 dbSNP
rs1319637475 2740 dbSNP
rs1400626209 2749 dbSNP
rs189008456 2751 dbSNP
rs1236446696 2754 dbSNP
rs929039083 2760 dbSNP
rs1303465143 2761 dbSNP
rs971863962 2762 dbSNP
rs550792901 2765 dbSNP
rs980192374 2770 dbSNP
rs1462183644 2778 dbSNP
rs927412411 2783 dbSNP
rs3175074 2786 dbSNP
rs1038504546 2790 dbSNP
rs887578090 2791 dbSNP
rs1274761194 2795 dbSNP
rs1445177290 2810 dbSNP
rs1291444178 2814 dbSNP
rs530203702 2817 dbSNP
rs1333721180 2821 dbSNP
rs1270809808 2822 dbSNP
rs1205592385 2827 dbSNP
rs930256235 2834 dbSNP
rs1220087029 2849 dbSNP
rs1051177808 2851 dbSNP
rs890777396 2852 dbSNP
rs1325144737 2854 dbSNP
rs1006994693 2863 dbSNP
rs1246511563 2864 dbSNP
rs1453072329 2865 dbSNP
rs1196094745 2871 dbSNP
rs1039445874 2881 dbSNP
rs1467358258 2885 dbSNP
rs747219161 2905 dbSNP
rs1420010552 2911 dbSNP
rs1167063824 2915 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084065. RNA binding protein: AGO2. Condition:CLIP_emetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gaCCCUCAUACCCCCGUCCCu 5'
            | ||| | || |||  || 
Target 5' uaGAGAG-AGGGAGGCUUGGg 3'
3 - 22
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084065
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_emetine_AbnovaAb
Location of target site ENST00000451188.2 | 3UTR | GCUAGAGAGAGGGAGGCUUGGGC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
110 hsa-miR-6752-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT152341 TNFSF9 TNF superfamily member 9 2 2
MIRT273594 SP1 Sp1 transcription factor 2 2
MIRT291927 TPM4 tropomyosin 4 2 4
MIRT311186 ANKRD33B ankyrin repeat domain 33B 2 4
MIRT378521 CDKN1A cyclin dependent kinase inhibitor 1A 2 4
MIRT452467 SORCS2 sortilin related VPS10 domain containing receptor 2 2 2
MIRT478636 CTDNEP1 CTD nuclear envelope phosphatase 1 2 2
MIRT496343 TMEM81 transmembrane protein 81 2 2
MIRT496646 MFAP3 microfibril associated protein 3 2 2
MIRT496711 DNAJC30 DnaJ heat shock protein family (Hsp40) member C30 2 2
MIRT499242 VAV3 vav guanine nucleotide exchange factor 3 2 4
MIRT519777 ZNF354B zinc finger protein 354B 2 6
MIRT520883 STX17 syntaxin 17 2 2
MIRT522476 ZAK mitogen-activated protein kinase kinase kinase 20 2 2
MIRT523587 G3BP2 G3BP stress granule assembly factor 2 2 6
MIRT525240 KCNJ12 potassium voltage-gated channel subfamily J member 12 2 2
MIRT527025 PABPN1L poly(A) binding protein nuclear 1 like, cytoplasmic 2 2
MIRT527709 IL17REL interleukin 17 receptor E like 2 2
MIRT530778 GPD1 glycerol-3-phosphate dehydrogenase 1 2 2
MIRT531883 SCN1B sodium voltage-gated channel beta subunit 1 2 2
MIRT533043 ZBTB46 zinc finger and BTB domain containing 46 2 2
MIRT535062 PPP2R5D protein phosphatase 2 regulatory subunit B'delta 2 4
MIRT536512 KCTD15 potassium channel tetramerization domain containing 15 2 2
MIRT543793 RALGAPB Ral GTPase activating protein non-catalytic beta subunit 2 2
MIRT563977 HCFC1 host cell factor C1 2 2
MIRT569472 MAN2A2 mannosidase alpha class 2A member 2 2 2
MIRT570600 NFIX nuclear factor I X 2 2
MIRT571402 MED4 mediator complex subunit 4 2 2
MIRT608418 PPIC peptidylprolyl isomerase C 2 6
MIRT608928 REXO2 RNA exonuclease 2 2 4
MIRT609357 ZNF664 zinc finger protein 664 2 2
MIRT611189 WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 2 4
MIRT615266 DPF2 double PHD fingers 2 2 2
MIRT615408 VDAC2 voltage dependent anion channel 2 2 2
MIRT616323 AGO3 argonaute 3, RISC catalytic component 2 2
MIRT616566 ZNF512B zinc finger protein 512B 2 2
MIRT616745 TAZ tafazzin 2 2
MIRT617316 MBOAT1 membrane bound O-acyltransferase domain containing 1 2 2
MIRT620030 NFAM1 NFAT activating protein with ITAM motif 1 2 2
MIRT621166 RTTN rotatin 2 2
MIRT623501 KCNQ3 potassium voltage-gated channel subfamily Q member 3 2 2
MIRT623524 KCNK10 potassium two pore domain channel subfamily K member 10 2 2
MIRT629683 TNFAIP8L1 TNF alpha induced protein 8 like 1 2 2
MIRT630795 TGIF2 TGFB induced factor homeobox 2 2 2
MIRT634638 HIP1 huntingtin interacting protein 1 2 4
MIRT636788 RAB40B RAB40B, member RAS oncogene family 2 2
MIRT640332 DAAM2 dishevelled associated activator of morphogenesis 2 2 2
MIRT640557 SMCR8 Smith-Magenis syndrome chromosome region, candidate 8 2 2
MIRT643319 TMEM151B transmembrane protein 151B 2 2
MIRT643991 DUSP28 dual specificity phosphatase 28 2 2
MIRT644618 CD300E CD300e molecule 2 2
MIRT646445 XRCC2 X-ray repair cross complementing 2 2 2
MIRT648020 SLCO4C1 solute carrier organic anion transporter family member 4C1 2 2
MIRT648077 ZMIZ2 zinc finger MIZ-type containing 2 2 2
MIRT649618 ITPKC inositol-trisphosphate 3-kinase C 2 2
MIRT650414 ZNF442 zinc finger protein 442 2 2
MIRT650850 SEMA4G semaphorin 4G 2 2
MIRT654694 PSMB5 proteasome subunit beta 5 2 2
MIRT655512 PAIP2B poly(A) binding protein interacting protein 2B 2 2
MIRT657620 GRAP2 GRB2-related adaptor protein 2 2 2
MIRT658009 GALNT10 polypeptide N-acetylgalactosaminyltransferase 10 2 2
MIRT658329 FAM83F family with sequence similarity 83 member F 2 2
MIRT658832 SRCAP Snf2 related CREBBP activator protein 2 2
MIRT658920 DPY19L4 dpy-19 like 4 2 2
MIRT661058 RPL18A ribosomal protein L18a 2 2
MIRT662342 MYLK3 myosin light chain kinase 3 2 2
MIRT663451 FBXO2 F-box protein 2 2 2
MIRT676752 SGTB small glutamine rich tetratricopeptide repeat containing beta 2 4
MIRT684705 LRRD1 leucine rich repeats and death domain containing 1 2 2
MIRT687247 PDHB pyruvate dehydrogenase E1 beta subunit 2 2
MIRT693881 NT5C2 5'-nucleotidase, cytosolic II 2 2
MIRT693922 HNRNPA1L2 heterogeneous nuclear ribonucleoprotein A1-like 2 2 2
MIRT695921 ZNF174 zinc finger protein 174 2 2
MIRT702867 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 2 2
MIRT708863 TMSB4X thymosin beta 4, X-linked 2 2
MIRT708936 CRY2 cryptochrome circadian clock 2 2 2
MIRT709476 FAXC failed axon connections homolog 2 2
MIRT709752 UBD ubiquitin D 2 2
MIRT710128 VANGL2 VANGL planar cell polarity protein 2 2 2
MIRT710274 FAM107A family with sequence similarity 107 member A 2 2
MIRT711146 TMEM174 transmembrane protein 174 2 2
MIRT712582 ATP2B4 ATPase plasma membrane Ca2+ transporting 4 2 2
MIRT712648 TXNL4A thioredoxin like 4A 2 2
MIRT713325 TMEM44 transmembrane protein 44 2 2
MIRT713413 PEX16 peroxisomal biogenesis factor 16 2 2
MIRT713891 RNF19B ring finger protein 19B 2 2
MIRT714549 COL14A1 collagen type XIV alpha 1 chain 2 2
MIRT714809 ARHGEF19 Rho guanine nucleotide exchange factor 19 2 2
MIRT714840 SCAMP2 secretory carrier membrane protein 2 2 2
MIRT715779 DDX42 DEAD-box helicase 42 2 2
MIRT715795 TBL3 transducin beta like 3 2 2
MIRT716088 RNF150 ring finger protein 150 2 2
MIRT716712 IMP4 IMP4, U3 small nucleolar ribonucleoprotein 2 2
MIRT716737 APOL6 apolipoprotein L6 2 2
MIRT717069 MTMR6 myotubularin related protein 6 2 2
MIRT718185 HLCS holocarboxylase synthetase 2 2
MIRT719386 SECTM1 secreted and transmembrane 1 2 2
MIRT720679 SLC39A13 solute carrier family 39 member 13 2 2
MIRT721315 FAM58A cyclin Q 2 2
MIRT721396 LDLRAD4 low density lipoprotein receptor class A domain containing 4 2 2
MIRT721896 ITPR2 inositol 1,4,5-trisphosphate receptor type 2 2 2
MIRT722442 ZBTB7B zinc finger and BTB domain containing 7B 2 2
MIRT723009 FADS1 fatty acid desaturase 1 2 2
MIRT723675 CTC1 CST telomere replication complex component 1 2 2
MIRT723774 ROBO4 roundabout guidance receptor 4 2 2
MIRT723814 OR1L8 olfactory receptor family 1 subfamily L member 8 2 2
MIRT723959 TMEM184A transmembrane protein 184A 2 2
MIRT724449 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT724798 C1D C1D nuclear receptor corepressor 2 2
MIRT725626 CAMKV CaM kinase like vesicle associated 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-6752-3p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-6752-3p Osimertinib 71496458 NSC779217 approved sensitive cell line (H1975)

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