pre-miRNA Information
pre-miRNA hsa-mir-6871   
Genomic Coordinates chr20: 41169023 - 41169078
Description Homo sapiens miR-6871 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6871-3p
Sequence 35| CAGCACCCUGUGGCUCCCACAG |56
Evidence Experimental
Experiments Meta-analysis
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN16670239 4 COSMIC
COSN1872096 9 COSMIC
COSM1741616 16 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs545076040 1 dbSNP
rs1273348199 2 dbSNP
rs1202373059 5 dbSNP
rs1340707970 7 dbSNP
rs372994756 8 dbSNP
rs869070782 15 dbSNP
rs931272568 16 dbSNP
rs1333765165 18 dbSNP
Putative Targets

Gene Information
Gene Symbol ZNF286A   
Synonyms ZNF286
Description zinc finger protein 286A
Transcript NM_001130842   
Other Transcripts NM_020652   
Expression
Putative miRNA Targets on ZNF286A
3'UTR of ZNF286A
(miRNA target sites are highlighted)
>ZNF286A|NM_001130842|3'UTR
   1 AAAATTACTGAATGTGAAGAAATGTAAGTTGGTTTTATCACTGTATTAAATACTTGAGTGTTTAGGTGGAAGGCGCATCC
  81 ATAATATGCATGTGAGGACCAATTCTGTATGCATCTAATTTCATTTGCGTAATACATAGTTTTGAGCCATAAGCAGGTTC
 161 TTTATGTCCGTTAATTTGATAATTATGAAATCTAGCCAGCGATTTCAAAATTTTAATCTCCAACGTCCCAAATAGCTATC
 241 TGTGGAAATTCAAGAAGTCCCTGAGAGTAGGTAGCAGTACGAACATTGTGAAATCCAGTTTTCCCCTCTCTTGTTTATGT
 321 CAGAGCTTTGTTGTAAGCCTCTCACTTTGTAAGGAAATTCTTATTGGGTAGGTTAGGCTGAGGGCTTACATCCTTATCAT
 401 CAGGAAGACACAATGTTGTTATTTATTACTCCTTGAGATCTAGATACACATATGGTATAATTCATCTAGAGTGTAATTTC
 481 TTTTATATTAGCCTTAAAAACCAAAAATGCTGGGTTCAAAGTCCTTAGAATTCCCTTCCTCCCTCAACAAGCTGCTGTCT
 561 ATGTTGATGACCATAACTGGGATGTATAATATTTACAGACAACTCTAAGTTACGTTCACATGGATTATGTACATCATTGA
 641 TTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTTGCTCTGTTGCCCGGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACT
 721 GCAACCTCCACCTCCCAGGTTCATGCCATTCTCTTGTCTCAGCCTCCCAAGTAGCTGGGACTACAGGCACCTGCCAGTAC
 801 GCCTGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTAGCCAGGATGGTCTTGATCTCCTGACCTC
 881 GTGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCATGCCTGGCATCATCATTGATTTATG
 961 TCATTGTTATCCCTCTACCGCGGAGACCTTCTTTCATTTTCCATTTCCCTGGGAGTTCACGTGAAGTAGTGAATGGGTCA
1041 AAATCTTAACAGTGGTTGTTGATCAAGTCCTTCCTTTCTTATCCTTGGCACTGAATAAATCTTTGGTTTTCCATAATCAA
1121 AGGGTGAGGGAGACTTCTTTTGTCTACATTATTCAGCTTTCTGAAAGCTATGCTGTGTCCATTTGAGAAAAAGCCCCAGG
1201 GATATTGAAGGTCTGAGAAGTTGAGTGGTTCAGTGTGTTATTATATTTAGGGTCCCAGTAAAGAAGAACTGAAGCAACTG
1281 TGAGACACCAGGGCATACTTCCCTGTATGAGTGGAAAACAAGGCACGGAAAATAGCTCACAGGATAGTCCTCAACTGACT
1361 TGCTTGAGGATAAGCAGCTTCCCTTCGTGAAGAAGTTGCCATTTCTCTGGCCTTCATATTTATCTACTTTTTGTTATTGT
1441 TGTCTGTATCGGTTCAATCTCACACTGCTATAAAGAAATGCCTGAGACTGGGTAACTTATAAAGAAAAAAGGTTTAATTG
1521 GCTCATGGTTCCATGGGCTGTACAGGAAGTATGACTGGGGAGGTCTCAGGGAGCTTTTACTCATGGCAAAAGGCAAAGCC
1601 AGAGCAGGTATCTTCACAGGGCTAGAGCAAGAGGAAAAGAGAGAGGGGAGGTGCTACACACTTTTTATGCAACCAAATCT
1681 CATGAGAACTCTATCACGAGACAGCAGTAGGGGGACAGTGCTAAATCATTCATGAGAAACTACCTGCGTGGTCCAGTCAC
1761 CTTGCACCAGGCCCCACCTCCCACATTGGGGATTACAATTAAACATGAGATTTGGGTGGGGATACAGATCTAAACTGTAT
1841 CATTACTCAAAAAAAAAAAAAAAAAGAAAGAAAAGAAAACACAGGAAAAGGAACTCACCTCTTTTATCATCTTAGTATTT
1921 AGTACTAATGGTTTAGAGCAGGAATTGACAAACTGTGGCCTGGACTCATGGACCAACTCTGGCCCACCACCTGTTTCTCA
2001 GAAGAAAATTTTATTGGAACTCAGCCACACTTACTCATTTACATGTTGTCCTTGACTGCCTTTGTGTCCAGTGTCAGAAC
2081 TGAGTAGCTGCAGCGGAGGTTGTGCCTCTGGGCTTTAATATCACAAACAGAGCAGCTTATAAGCAACAGAAACTTACTTC
2161 TCACAGTTTTGGAGGCTGGGAAGTCCAAGATCAAGGTGTCAACATATTTAGGGTCTAGGGAAGGTCTGCTTCTTGGTTAA
2241 TAGAAAGCACCTTTCACTGTGTCTTCACATGGTAGAAGGGGAGAGCTCTGGTATCTTCAGCCCCTTATAAGGGCACTAAT
2321 CCCATTCATGAGAGCTCCACCCTCACGACCTAATCACCTCCAAAAGGCCCCATTTCGTAATACCGTCAGTTAAGTTTCAT
2401 TATATGACTTTGATGGGGATATAGCCCATAGTAGGTTGTATGTCCCTGAAAGCCTAAAATATTTACTGTTTGGCTCTTTA
2481 CAGAAAATATTTTCTTGGCCCCTGTTCCAGAGCATTCATCAAGTCAGATAAAGGGTTTAAACCAGTCAGAGAAACTAGGT
2561 GGAATGGAAAAGTACTGAGAGATAATTGGGGACAGAAAAATAAAAGAGATGGGAAATGCTGCATCAAAATACTCCTACCT
2641 CTAGGATGTTACTATATATTGTTAGGAGAATTCAAGTTATTGAAACTTGCCAAATTCTTGAGTGAAGAGGAATTCATTTG
2721 AGAGCCAAAATTTGACTAAGGAAAGAAGACCAACATGGGCTTTCCAAAGTTGAGTTTGAATTCTGCCATCCCCACTAAGC
2801 AGTCATGTGACCTTGGAAAAACTCCCTACTCTGAGTCTCAGTTTCTTTATCTGTATTAGGTTTCAACAAAGGGAATAAAT
2881 CATTGGCTTCTCATGAGGTTGTCATAAGGATTAAATAAGACAATGCATATAAAAGAACTGGCAGACAATAAATATAGAGT
2961 CCCCCACTCCTGCTTGGTGCTCTCTTTCTCTCTCCTTCTCTACATAGAGAAGTGCCAGAGCATCCGTCAGTAGAAGTTAC
3041 TTAAGGTTGGCTGTGTCTTCCACATCTTTTGTTTACCCATGAAGAACTGTGACCATCTTGTTCTGTGTCTTGTCATAAAG
3121 ATGGGACGTGACTTCTTTCTGCTCTTGCTTCCATCTGGTGCTGTTTTCTGCACAGCCTCCTTGAGACCTTCCAGAACCTT
3201 CTTTTTTCCTACTTCATATCACTTAACCAGTAGCTATCTGGGATGGTTCCAGAGGCTGAAGTTTGCAGTTGAATAACATT
3281 TTAAATAGTGTTAAGCGACTTGGGATCTCTGGCCCTTTGCGTTTCAGTATTTGTCCTTTTTATGCCTGATGTTTAACCTG
3361 CCACATGTTTGTACTGCAACATGAATCTTGGAAATTTTAATGTTATGCATTTCAAATGTTTTTGGTTATCTGTAAACTAA
3441 ATGTGCCCTTATTGGCTCACTTGTCAATAAAGATGTTTGTATATGTATTGTCAGAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' gacaCCCU-CGGUGUCCCACGAc 5'
              |||| |:| ||||| ||| 
Target 5' actgGGGAGGTCTCAGGGAGCTt 3'
1554 - 1576 138.00 -26.30
2
miRNA  3' gacacccucGGUGUCCCACGAc 5'
                   |||:  |||||| 
Target 5' ctcttgcttCCATCTGGTGCTg 3'
3142 - 3163 121.00 -17.70
3
miRNA  3' gacacccucggugucCCACGAc 5'
                         |||||| 
Target 5' aaaagagagaggggaGGTGCTa 3'
1635 - 1656 120.00 -13.70
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31605093 9 COSMIC
COSN31575416 28 COSMIC
COSN30498693 36 COSMIC
COSN28604524 44 COSMIC
COSN18740641 76 COSMIC
COSN31586040 129 COSMIC
COSN30540078 130 COSMIC
COSN20113602 401 COSMIC
COSN22536059 901 COSMIC
COSN8832193 943 COSMIC
COSN6652609 983 COSMIC
COSN6652610 1072 COSMIC
COSN15130151 1149 COSMIC
COSN23987625 1242 COSMIC
COSN5865651 1445 COSMIC
COSN6652611 1823 COSMIC
COSN6652612 1837 COSMIC
COSN6652613 1838 COSMIC
COSN8240535 1863 COSMIC
COSN29785652 2303 COSMIC
COSN32062488 2386 COSMIC
COSN32062489 2390 COSMIC
COSN6652614 2468 COSMIC
COSN17119479 2677 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1353457226 3 dbSNP
rs768007104 5 dbSNP
rs1277961774 7 dbSNP
rs1256334365 16 dbSNP
rs1443033150 22 dbSNP
rs1215796340 24 dbSNP
rs1322697556 32 dbSNP
rs1289692207 33 dbSNP
rs1205673219 36 dbSNP
rs1236522225 37 dbSNP
rs1319288272 38 dbSNP
rs1200585790 40 dbSNP
rs752722289 41 dbSNP
rs3915632 44 dbSNP
rs764466929 45 dbSNP
rs754089507 51 dbSNP
rs757157602 53 dbSNP
rs1280666747 59 dbSNP
rs1233817141 74 dbSNP
rs928720195 75 dbSNP
rs58734516 76 dbSNP
rs1349067975 78 dbSNP
rs1162480709 84 dbSNP
rs960080349 87 dbSNP
rs1408565276 91 dbSNP
rs1394655397 92 dbSNP
rs558048999 95 dbSNP
rs578223810 99 dbSNP
rs1439094948 100 dbSNP
rs989006183 104 dbSNP
rs913382910 108 dbSNP
rs1488950017 116 dbSNP
rs1246373971 126 dbSNP
rs540920506 130 dbSNP
rs1319117769 133 dbSNP
rs1287283689 150 dbSNP
rs560516458 151 dbSNP
rs1043693952 153 dbSNP
rs1350844338 154 dbSNP
rs1305053765 158 dbSNP
rs922174194 161 dbSNP
rs1366421441 164 dbSNP
rs1389590571 165 dbSNP
rs1328175698 166 dbSNP
rs529306482 169 dbSNP
rs1051355284 170 dbSNP
rs543000747 171 dbSNP
rs1346651307 192 dbSNP
rs1004577471 201 dbSNP
rs563011782 202 dbSNP
rs531683663 208 dbSNP
rs770039385 217 dbSNP
rs1336963308 219 dbSNP
rs1194744469 224 dbSNP
rs550778478 225 dbSNP
rs878936400 226 dbSNP
rs376967329 228 dbSNP
rs1192101485 232 dbSNP
rs570538004 234 dbSNP
rs1311119670 235 dbSNP
rs1298657770 254 dbSNP
rs1216033710 261 dbSNP
rs1454856628 267 dbSNP
rs1340886028 270 dbSNP
rs72821704 272 dbSNP
rs1388396425 273 dbSNP
rs1035677772 274 dbSNP
rs1168580102 281 dbSNP
rs529041872 282 dbSNP
rs1377205394 288 dbSNP
rs960133914 291 dbSNP
rs1430569065 297 dbSNP
rs546494500 299 dbSNP
rs1370037078 302 dbSNP
rs1193345814 305 dbSNP
rs1260159172 311 dbSNP
rs913434286 311 dbSNP
rs969299110 314 dbSNP
rs1305093717 315 dbSNP
rs978913264 319 dbSNP
rs1206161622 338 dbSNP
rs566390201 342 dbSNP
rs1226000552 345 dbSNP
rs1216503431 363 dbSNP
rs1357135799 365 dbSNP
rs535096856 373 dbSNP
rs1342051021 376 dbSNP
rs932224038 380 dbSNP
rs1301220773 387 dbSNP
rs1467268106 390 dbSNP
rs111947351 396 dbSNP
rs1051408379 399 dbSNP
rs911540822 407 dbSNP
rs940485408 411 dbSNP
rs1036064381 422 dbSNP
rs1469242847 432 dbSNP
rs1215945138 445 dbSNP
rs555035011 450 dbSNP
rs1428163571 451 dbSNP
rs1178395531 454 dbSNP
rs1457828763 456 dbSNP
rs898883149 458 dbSNP
rs1196440040 465 dbSNP
rs1374899146 467 dbSNP
rs62071728 476 dbSNP
rs1243950494 482 dbSNP
rs748451492 483 dbSNP
rs1338579889 500 dbSNP
rs180819876 501 dbSNP
rs1003442205 502 dbSNP
rs1330915775 508 dbSNP
rs879250403 510 dbSNP
rs780547373 512 dbSNP
rs895811796 513 dbSNP
rs1010205679 529 dbSNP
rs566040586 530 dbSNP
rs1161934284 534 dbSNP
rs1439762001 540 dbSNP
rs1237109498 542 dbSNP
rs1176364188 555 dbSNP
rs1381343749 564 dbSNP
rs558372768 568 dbSNP
rs1295648865 572 dbSNP
rs1262358447 574 dbSNP
rs1353997830 574 dbSNP
rs1240856930 578 dbSNP
rs1020789670 580 dbSNP
rs1308668859 582 dbSNP
rs968808938 587 dbSNP
rs1332997838 593 dbSNP
rs1285911166 604 dbSNP
rs4374205 606 dbSNP
rs979352843 606 dbSNP
rs1354146233 610 dbSNP
rs9905520 614 dbSNP
rs1379131454 615 dbSNP
rs1293143191 620 dbSNP
rs1336125499 626 dbSNP
rs1478742865 633 dbSNP
rs953655086 635 dbSNP
rs987682231 637 dbSNP
rs1259365156 640 dbSNP
rs1232898106 641 dbSNP
rs1275652720 641 dbSNP
rs1300489020 641 dbSNP
rs1329682918 641 dbSNP
rs1401017085 641 dbSNP
rs769116482 641 dbSNP
rs911593210 641 dbSNP
rs1485645928 644 dbSNP
rs940372265 648 dbSNP
rs1296893031 650 dbSNP
rs1415627015 652 dbSNP
rs1205992904 657 dbSNP
rs4054359 662 dbSNP
rs867024104 663 dbSNP
rs1298983961 664 dbSNP
rs1484696426 664 dbSNP
rs1187333030 665 dbSNP
rs1417018166 667 dbSNP
rs1475514146 671 dbSNP
rs186264311 673 dbSNP
rs111397376 675 dbSNP
rs1477388606 676 dbSNP
rs1260868780 679 dbSNP
rs930395181 684 dbSNP
rs191890233 687 dbSNP
rs574347872 688 dbSNP
rs1045322439 689 dbSNP
rs543030253 697 dbSNP
rs866455965 701 dbSNP
rs1340311445 702 dbSNP
rs1276841647 704 dbSNP
rs1450900926 705 dbSNP
rs149683145 705 dbSNP
rs1056401736 706 dbSNP
rs1417202900 707 dbSNP
rs1305275181 708 dbSNP
rs1464899623 709 dbSNP
rs368142045 713 dbSNP
rs551473700 714 dbSNP
rs1473115015 716 dbSNP
rs1262657814 719 dbSNP
rs892349147 720 dbSNP
rs1346024508 724 dbSNP
rs1010259538 725 dbSNP
rs182026511 730 dbSNP
rs1260175328 732 dbSNP
rs532971302 733 dbSNP
rs1317678221 734 dbSNP
rs1256602396 738 dbSNP
rs546355593 747 dbSNP
rs1380461781 752 dbSNP
rs1029616167 754 dbSNP
rs1378552952 765 dbSNP
rs868412044 769 dbSNP
rs4471717 770 dbSNP
rs987567130 771 dbSNP
rs529133584 773 dbSNP
rs749347942 774 dbSNP
rs972166622 775 dbSNP
rs920253668 776 dbSNP
rs1240177010 780 dbSNP
rs1179459235 782 dbSNP
rs1457521739 786 dbSNP
rs1231414789 789 dbSNP
rs373803976 790 dbSNP
rs1224184625 793 dbSNP
rs1322697837 797 dbSNP
rs1289716159 798 dbSNP
rs930426127 801 dbSNP
rs1375572014 802 dbSNP
rs926325088 808 dbSNP
rs1468014603 811 dbSNP
rs1294931356 815 dbSNP
rs1436861404 822 dbSNP
rs939169396 828 dbSNP
rs1056287742 832 dbSNP
rs1392285037 835 dbSNP
rs1382222473 836 dbSNP
rs1309648814 840 dbSNP
rs1159275343 845 dbSNP
rs1439193759 847 dbSNP
rs1369013256 848 dbSNP
rs113667774 853 dbSNP
rs913834044 854 dbSNP
rs1246535484 862 dbSNP
rs945301176 868 dbSNP
rs1233908634 870 dbSNP
rs1281114285 872 dbSNP
rs1350232210 878 dbSNP
rs548999972 881 dbSNP
rs1249486999 882 dbSNP
rs537048653 894 dbSNP
rs1177526964 895 dbSNP
rs1239816752 896 dbSNP
rs1000723997 897 dbSNP
rs1192680912 898 dbSNP
rs568753197 916 dbSNP
rs889161705 919 dbSNP
rs557191260 926 dbSNP
rs1009040795 928 dbSNP
rs1019055427 933 dbSNP
rs145242955 935 dbSNP
rs574316701 939 dbSNP
rs1462983927 940 dbSNP
rs951752185 943 dbSNP
rs1333762480 945 dbSNP
rs1216596047 948 dbSNP
rs4054360 950 dbSNP
rs1440439854 951 dbSNP
rs980805428 953 dbSNP
rs1210360349 955 dbSNP
rs1370015266 956 dbSNP
rs1311198359 962 dbSNP
rs1212829910 963 dbSNP
rs1220165473 964 dbSNP
rs1340909113 971 dbSNP
rs1277467675 974 dbSNP
rs1380502681 976 dbSNP
rs553558091 980 dbSNP
rs571320135 981 dbSNP
rs372213216 982 dbSNP
rs57926136 983 dbSNP
rs1467499246 988 dbSNP
rs913719428 989 dbSNP
rs1193536156 996 dbSNP
rs1467019919 997 dbSNP
rs60179255 998 dbSNP
rs1258900795 1008 dbSNP
rs945326227 1010 dbSNP
rs536529850 1021 dbSNP
rs556560344 1022 dbSNP
rs1200200626 1030 dbSNP
rs1184229440 1031 dbSNP
rs925160026 1053 dbSNP
rs936020402 1062 dbSNP
rs1313355624 1063 dbSNP
rs4054361 1072 dbSNP
rs1173538540 1076 dbSNP
rs1416340888 1093 dbSNP
rs1050364916 1094 dbSNP
rs1449333609 1095 dbSNP
rs1401452903 1097 dbSNP
rs1170348935 1098 dbSNP
rs1460815947 1100 dbSNP
rs1461201096 1105 dbSNP
rs889214037 1111 dbSNP
rs1327020144 1114 dbSNP
rs1166122240 1118 dbSNP
rs1422712063 1129 dbSNP
rs1240797795 1131 dbSNP
rs1180086723 1135 dbSNP
rs1457897620 1138 dbSNP
rs1237226204 1145 dbSNP
rs545346892 1149 dbSNP
rs1008916333 1155 dbSNP
rs1288339672 1162 dbSNP
rs4054362 1165 dbSNP
rs1219159644 1166 dbSNP
rs1040556672 1168 dbSNP
rs897988911 1169 dbSNP
rs1279938702 1180 dbSNP
rs1377874836 1181 dbSNP
rs1328440792 1187 dbSNP
rs994036276 1195 dbSNP
rs1393400892 1196 dbSNP
rs1332620266 1200 dbSNP
rs1424627051 1201 dbSNP
rs1027906794 1202 dbSNP
rs952371648 1203 dbSNP
rs1439782216 1205 dbSNP
rs1001889379 1212 dbSNP
rs1179294778 1214 dbSNP
rs565055157 1218 dbSNP
rs7211816 1225 dbSNP
rs1209143662 1228 dbSNP
rs960468356 1229 dbSNP
rs991906198 1233 dbSNP
rs1354517267 1238 dbSNP
rs913771955 1241 dbSNP
rs1241014134 1250 dbSNP
rs1333155966 1255 dbSNP
rs1485870860 1256 dbSNP
rs1404759555 1261 dbSNP
rs1364184238 1276 dbSNP
rs1300606446 1282 dbSNP
rs1419761665 1286 dbSNP
rs1383701530 1287 dbSNP
rs1156418097 1290 dbSNP
rs1195231855 1303 dbSNP
rs966578789 1308 dbSNP
rs1479336021 1312 dbSNP
rs1416264318 1315 dbSNP
rs1265172675 1317 dbSNP
rs1194369113 1318 dbSNP
rs768249921 1325 dbSNP
rs147234506 1327 dbSNP
rs1416471825 1328 dbSNP
rs925244400 1333 dbSNP
rs932534873 1335 dbSNP
rs986115882 1340 dbSNP
rs1280644456 1343 dbSNP
rs1401188379 1345 dbSNP
rs1346011997 1348 dbSNP
rs1401855428 1350 dbSNP
rs910548497 1351 dbSNP
rs1311178170 1356 dbSNP
rs1353455685 1361 dbSNP
rs1414147698 1362 dbSNP
rs1402387774 1364 dbSNP
rs1175282460 1366 dbSNP
rs944824483 1367 dbSNP
rs540065826 1368 dbSNP
rs1425587143 1369 dbSNP
rs1171258027 1370 dbSNP
rs1040442233 1376 dbSNP
rs139351450 1387 dbSNP
rs2530062 1388 dbSNP
rs185959575 1392 dbSNP
rs867034616 1399 dbSNP
rs1203350726 1401 dbSNP
rs1049666247 1402 dbSNP
rs1218113528 1406 dbSNP
rs1219657689 1419 dbSNP
rs562757182 1424 dbSNP
rs1423902795 1427 dbSNP
rs1449511104 1430 dbSNP
rs2530060 1443 dbSNP
rs529236834 1451 dbSNP
rs1002438623 1452 dbSNP
rs1402168081 1464 dbSNP
rs1239570576 1465 dbSNP
rs1033385606 1466 dbSNP
rs1468863202 1467 dbSNP
rs867789867 1469 dbSNP
rs190721126 1482 dbSNP
rs551321193 1485 dbSNP
rs1183203185 1524 dbSNP
rs1171826384 1525 dbSNP
rs1374990417 1526 dbSNP
rs1434023692 1531 dbSNP
rs1205581575 1534 dbSNP
rs1437624642 1538 dbSNP
rs1271486500 1540 dbSNP
rs1334662133 1541 dbSNP
rs1342211904 1544 dbSNP
rs1313797427 1545 dbSNP
rs1243164737 1546 dbSNP
rs571385140 1559 dbSNP
rs868464483 1561 dbSNP
rs1377140393 1563 dbSNP
rs1441195051 1564 dbSNP
rs1241932655 1565 dbSNP
rs1277553647 1568 dbSNP
rs1405934574 1577 dbSNP
rs533847754 1583 dbSNP
rs1364911681 1587 dbSNP
rs966840498 1590 dbSNP
rs1162968687 1593 dbSNP
rs879149413 1601 dbSNP
rs1442860022 1602 dbSNP
rs1346604659 1606 dbSNP
rs979304345 1609 dbSNP
rs1200534258 1610 dbSNP
rs1231564086 1613 dbSNP
rs1281269043 1616 dbSNP
rs1436599521 1618 dbSNP
rs1490641493 1622 dbSNP
rs1291726778 1623 dbSNP
rs1181500348 1624 dbSNP
rs1219552356 1624 dbSNP
rs867350375 1626 dbSNP
rs1032579824 1634 dbSNP
rs548044253 1637 dbSNP
rs1441767203 1639 dbSNP
rs1370880239 1641 dbSNP
rs1192063593 1649 dbSNP
rs954024462 1655 dbSNP
rs1301228765 1656 dbSNP
rs1422806926 1656 dbSNP
rs985334185 1663 dbSNP
rs1454721880 1674 dbSNP
rs912443233 1675 dbSNP
rs1404215956 1677 dbSNP
rs944709992 1678 dbSNP
rs1193241878 1681 dbSNP
rs1408177066 1689 dbSNP
rs1480969251 1689 dbSNP
rs1327912495 1690 dbSNP
rs1197974886 1695 dbSNP
rs1400837536 1698 dbSNP
rs1260857808 1699 dbSNP
rs567849661 1700 dbSNP
rs1448527117 1710 dbSNP
rs1300717708 1713 dbSNP
rs536998974 1715 dbSNP
rs919360975 1727 dbSNP
rs929368025 1728 dbSNP
rs1344702319 1730 dbSNP
rs1276151444 1732 dbSNP
rs1401811647 1735 dbSNP
rs556590222 1738 dbSNP
rs1195790453 1742 dbSNP
rs1049253395 1743 dbSNP
rs570297217 1748 dbSNP
rs1459320178 1749 dbSNP
rs1470506522 1753 dbSNP
rs1429079629 1754 dbSNP
rs1479061112 1764 dbSNP
rs938279186 1767 dbSNP
rs1185364885 1768 dbSNP
rs1252557986 1771 dbSNP
rs1055393490 1773 dbSNP
rs1452441059 1775 dbSNP
rs1322523566 1777 dbSNP
rs1261076571 1778 dbSNP
rs1220256973 1779 dbSNP
rs1307961871 1788 dbSNP
rs896702494 1791 dbSNP
rs1381658069 1794 dbSNP
rs1013278216 1806 dbSNP
rs112333534 1813 dbSNP
rs1371455045 1817 dbSNP
rs967551162 1818 dbSNP
rs1474377806 1821 dbSNP
rs1167330055 1822 dbSNP
rs142910567 1823 dbSNP
rs977997222 1826 dbSNP
rs928372193 1828 dbSNP
rs796508597 1829 dbSNP
rs1405661159 1830 dbSNP
rs1335094813 1831 dbSNP
rs1467516521 1835 dbSNP
rs1021013556 1836 dbSNP
rs796769755 1836 dbSNP
rs150757006 1837 dbSNP
rs139090006 1838 dbSNP
rs1393223071 1842 dbSNP
rs1387046716 1843 dbSNP
rs1240917532 1846 dbSNP
rs1200220271 1847 dbSNP
rs1324942485 1847 dbSNP
rs1480842720 1848 dbSNP
rs960052206 1848 dbSNP
rs1225204918 1849 dbSNP
rs1313208225 1849 dbSNP
rs1344754064 1849 dbSNP
rs1382227227 1849 dbSNP
rs372793188 1849 dbSNP
rs866487389 1849 dbSNP
rs1324246824 1858 dbSNP
rs1397738606 1858 dbSNP
rs1298073036 1859 dbSNP
rs572243233 1859 dbSNP
rs1163624895 1860 dbSNP
rs1226069264 1860 dbSNP
rs1180184784 1862 dbSNP
rs1279327263 1862 dbSNP
rs112565129 1863 dbSNP
rs1223247564 1863 dbSNP
rs202064478 1863 dbSNP
rs1358892563 1864 dbSNP
rs1241492473 1865 dbSNP
rs1320653620 1865 dbSNP
rs1231802337 1866 dbSNP
rs1306672247 1866 dbSNP
rs1272993829 1867 dbSNP
rs1304294193 1867 dbSNP
rs1488916275 1869 dbSNP
rs796877443 1870 dbSNP
rs1159917323 1871 dbSNP
rs866630504 1871 dbSNP
rs1179322267 1872 dbSNP
rs1197032705 1872 dbSNP
rs902290987 1877 dbSNP
rs182531301 1881 dbSNP
rs1198691814 1882 dbSNP
rs553599409 1895 dbSNP
rs1194489828 1901 dbSNP
rs1206992393 1902 dbSNP
rs1263745302 1912 dbSNP
rs1478779098 1915 dbSNP
rs1001018395 1917 dbSNP
rs1162506192 1930 dbSNP
rs2649397 1945 dbSNP
rs1237261390 1946 dbSNP
rs1458095779 1951 dbSNP
rs1284476248 1959 dbSNP
rs1164575894 1962 dbSNP
rs1032207428 1973 dbSNP
rs1319672882 1976 dbSNP
rs1382342218 1984 dbSNP
rs1382304132 1987 dbSNP
rs1381116307 1994 dbSNP
rs1298315239 1996 dbSNP
rs1470832759 2001 dbSNP
rs1429783869 2015 dbSNP
rs954019797 2018 dbSNP
rs542764792 2031 dbSNP
rs1243803884 2033 dbSNP
rs1293046296 2035 dbSNP
rs1447668771 2042 dbSNP
rs985219653 2049 dbSNP
rs1019507021 2050 dbSNP
rs1247448327 2055 dbSNP
rs1264091944 2056 dbSNP
rs1223312521 2075 dbSNP
rs368970994 2081 dbSNP
rs1272448249 2082 dbSNP
rs1227506227 2087 dbSNP
rs1325416324 2091 dbSNP
rs1315754388 2094 dbSNP
rs372426431 2096 dbSNP
rs1217377093 2100 dbSNP
rs1288295586 2119 dbSNP
rs1468037924 2129 dbSNP
rs376484531 2131 dbSNP
rs976082960 2135 dbSNP
rs1168481110 2136 dbSNP
rs1489224376 2142 dbSNP
rs919233547 2148 dbSNP
rs534606472 2156 dbSNP
rs985273327 2165 dbSNP
rs879198854 2176 dbSNP
rs1243983011 2186 dbSNP
rs1424121519 2200 dbSNP
rs1189389116 2201 dbSNP
rs1203373011 2201 dbSNP
rs1361665659 2216 dbSNP
rs1460310352 2221 dbSNP
rs1275720493 2225 dbSNP
rs1196930101 2233 dbSNP
rs1418755109 2236 dbSNP
rs909266264 2238 dbSNP
rs1247570143 2242 dbSNP
rs938164947 2244 dbSNP
rs186317070 2251 dbSNP
rs551411910 2262 dbSNP
rs918187614 2270 dbSNP
rs1356128217 2272 dbSNP
rs545047837 2273 dbSNP
rs1329419518 2276 dbSNP
rs1312733098 2278 dbSNP
rs1394289622 2278 dbSNP
rs1166723302 2281 dbSNP
rs949605903 2283 dbSNP
rs1398096963 2291 dbSNP
rs1305345133 2292 dbSNP
rs1335363030 2295 dbSNP
rs1386083433 2301 dbSNP
rs2530059 2302 dbSNP
rs1235014304 2306 dbSNP
rs1183009338 2309 dbSNP
rs1288250636 2313 dbSNP
rs527423831 2325 dbSNP
rs2530058 2334 dbSNP
rs1290573392 2335 dbSNP
rs1243367047 2338 dbSNP
rs1375226650 2346 dbSNP
rs1255290893 2347 dbSNP
rs182491423 2348 dbSNP
rs1426626058 2349 dbSNP
rs1366320037 2350 dbSNP
rs1163151398 2351 dbSNP
rs141138905 2354 dbSNP
rs188012109 2355 dbSNP
rs965294471 2366 dbSNP
rs570281628 2377 dbSNP
rs373188421 2378 dbSNP
rs1490361127 2385 dbSNP
rs558572278 2385 dbSNP
rs565735837 2386 dbSNP
rs1218782014 2388 dbSNP
rs1178938607 2390 dbSNP
rs1381783761 2392 dbSNP
rs1284537153 2395 dbSNP
rs1026353380 2402 dbSNP
rs1348365540 2403 dbSNP
rs950778949 2407 dbSNP
rs1174766692 2420 dbSNP
rs1360206642 2422 dbSNP
rs1344833459 2428 dbSNP
rs1468063241 2433 dbSNP
rs192365189 2436 dbSNP
rs554654341 2439 dbSNP
rs1447993694 2452 dbSNP
rs1311669356 2453 dbSNP
rs8079347 2468 dbSNP
rs959418479 2469 dbSNP
rs1179179552 2473 dbSNP
rs1481021386 2474 dbSNP
rs991007537 2481 dbSNP
rs1188892187 2493 dbSNP
rs918074901 2502 dbSNP
rs1302120172 2505 dbSNP
rs567841005 2508 dbSNP
rs1214686849 2510 dbSNP
rs542476653 2513 dbSNP
rs377321175 2514 dbSNP
rs556298793 2515 dbSNP
rs576289626 2518 dbSNP
rs936349437 2519 dbSNP
rs200361865 2521 dbSNP
rs1364254496 2523 dbSNP
rs889556370 2526 dbSNP
rs1457100689 2527 dbSNP
rs1006583648 2533 dbSNP
rs1040890477 2534 dbSNP
rs536988737 2547 dbSNP
rs1429183690 2548 dbSNP
rs1199052053 2556 dbSNP
rs1429745587 2557 dbSNP
rs993975287 2559 dbSNP
rs1185455974 2560 dbSNP
rs1447247508 2571 dbSNP
rs1239566246 2573 dbSNP
rs1025989348 2577 dbSNP
rs1460747020 2582 dbSNP
rs1254167240 2587 dbSNP
rs370639986 2589 dbSNP
rs952629421 2591 dbSNP
rs1309309241 2597 dbSNP
rs1296324640 2602 dbSNP
rs1006651270 2609 dbSNP
rs1016252678 2610 dbSNP
rs1425317439 2611 dbSNP
rs1317507027 2613 dbSNP
rs959470333 2614 dbSNP
rs112292458 2620 dbSNP
rs1301588236 2621 dbSNP
rs1463940382 2622 dbSNP
rs1355661503 2624 dbSNP
rs1423561340 2633 dbSNP
rs1025027518 2637 dbSNP
rs1427270976 2645 dbSNP
rs1466427481 2649 dbSNP
rs971314009 2656 dbSNP
rs2240596 2664 dbSNP
rs569540930 2666 dbSNP
rs1443749073 2668 dbSNP
rs527285060 2669 dbSNP
rs1392516712 2677 dbSNP
rs539239724 2681 dbSNP
rs1178751424 2691 dbSNP
rs924208296 2692 dbSNP
rs936922334 2693 dbSNP
rs989580935 2699 dbSNP
rs143550079 2703 dbSNP
rs1340217071 2705 dbSNP
rs879308132 2708 dbSNP
rs2530057 2711 dbSNP
rs1040773842 2713 dbSNP
rs1310982073 2719 dbSNP
rs2530056 2724 dbSNP
rs1374610597 2725 dbSNP
rs929810891 2735 dbSNP
rs1276160569 2739 dbSNP
rs1366937821 2742 dbSNP
rs1163801767 2756 dbSNP
rs1423551704 2756 dbSNP
rs1046869419 2758 dbSNP
rs1160933513 2785 dbSNP
rs888383700 2789 dbSNP
rs1005452470 2796 dbSNP
rs1016304942 2805 dbSNP
rs1332183757 2806 dbSNP
rs78577959 2808 dbSNP
rs1223366576 2841 dbSNP
rs1355830992 2849 dbSNP
rs895153744 2854 dbSNP
rs1220443882 2866 dbSNP
rs1241601355 2867 dbSNP
rs183368982 2874 dbSNP
rs550142956 2884 dbSNP
rs1408586364 2889 dbSNP
rs1347960636 2898 dbSNP
rs1025078452 2901 dbSNP
rs1388117720 2902 dbSNP
rs1290336355 2906 dbSNP
rs1454094817 2909 dbSNP
rs1411026052 2913 dbSNP
rs970815474 2930 dbSNP
rs2530055 2931 dbSNP
rs1429918495 2932 dbSNP
rs1200169038 2946 dbSNP
rs1451164064 2948 dbSNP
rs1265526690 2949 dbSNP
rs978690440 2950 dbSNP
rs1486383432 2955 dbSNP
rs1267841395 2960 dbSNP
rs532716585 2968 dbSNP
rs1184284598 2970 dbSNP
rs2240595 2972 dbSNP
rs1478457921 2974 dbSNP
rs1173244991 2979 dbSNP
rs1297252090 2981 dbSNP
rs1382392031 2987 dbSNP
rs989689085 2995 dbSNP
rs1416222144 2998 dbSNP
rs911434621 3005 dbSNP
rs1165662995 3007 dbSNP
rs1171990709 3021 dbSNP
rs1477719788 3022 dbSNP
rs565995580 3026 dbSNP
rs976357975 3027 dbSNP
rs1428662611 3047 dbSNP
rs534711191 3051 dbSNP
rs1247647731 3057 dbSNP
rs2240594 3065 dbSNP
rs1339716071 3071 dbSNP
rs543440854 3072 dbSNP
rs138996643 3092 dbSNP
rs537535057 3095 dbSNP
rs2530054 3109 dbSNP
rs1343523011 3116 dbSNP
rs888276838 3122 dbSNP
rs1376787268 3124 dbSNP
rs1271393571 3125 dbSNP
rs1227529392 3128 dbSNP
rs556946681 3129 dbSNP
rs1454369568 3132 dbSNP
rs556125189 3133 dbSNP
rs1333401306 3137 dbSNP
rs894370552 3141 dbSNP
rs1398583933 3142 dbSNP
rs1169656788 3148 dbSNP
rs1323181250 3149 dbSNP
rs1212997562 3154 dbSNP
rs1389767505 3159 dbSNP
rs573569737 3177 dbSNP
rs1446799980 3180 dbSNP
rs1488896931 3181 dbSNP
rs1024963780 3182 dbSNP
rs906640532 3184 dbSNP
rs1256027017 3213 dbSNP
rs1275742321 3216 dbSNP
rs13915 3217 dbSNP
rs1271999368 3226 dbSNP
rs376570933 3228 dbSNP
rs1359736096 3229 dbSNP
rs1283339511 3230 dbSNP
rs1445545391 3243 dbSNP
rs1031626573 3247 dbSNP
rs1329527555 3258 dbSNP
rs1410482333 3262 dbSNP
rs958234633 3279 dbSNP
rs1166821379 3286 dbSNP
rs1426744314 3290 dbSNP
rs1416178287 3295 dbSNP
rs1162980430 3296 dbSNP
rs1472050054 3297 dbSNP
rs1235102451 3298 dbSNP
rs1010996328 3322 dbSNP
rs1158097458 3327 dbSNP
rs538789726 3331 dbSNP
rs1248919818 3338 dbSNP
rs1361311970 3352 dbSNP
rs1224108634 3365 dbSNP
rs1321874592 3366 dbSNP
rs964240251 3376 dbSNP
rs976410286 3377 dbSNP
rs1352656339 3380 dbSNP
rs1280044599 3388 dbSNP
rs1227659705 3391 dbSNP
rs922277548 3403 dbSNP
rs1306190295 3407 dbSNP
rs1406862406 3408 dbSNP
rs951237230 3419 dbSNP
rs542877266 3431 dbSNP
rs982547622 3433 dbSNP
rs1410678373 3446 dbSNP
rs187221213 3449 dbSNP
rs1472525825 3460 dbSNP
rs941188962 3475 dbSNP
rs372769846 3476 dbSNP
rs915855071 3479 dbSNP
rs1488553965 3482 dbSNP
rs2530053 3488 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084064. RNA binding protein: AGO2. Condition:CLIP_noemetine_AbnovaAb HITS-CLIP data was present in GSM1084065. RNA binding protein: AGO2. Condition:CLIP_emetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gacacccucggugucCCACGAc 5'
                         |||||| 
Target 5' aaaagagagaggggaGGUGCU- 3'
1 - 21
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084064
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noemetine_AbnovaAb
Location of target site ENST00000395894.2 | 3UTR | AAAAGAGAGAGGGGAGGU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1084065
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_emetine_AbnovaAb
Location of target site ENST00000395894.2 | 3UTR | AAAAGAGAGAGGGGAGGUGCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
88 hsa-miR-6871-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT061678 BTG2 BTG anti-proliferation factor 2 2 4
MIRT116181 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 2
MIRT150139 MIDN midnolin 2 2
MIRT197058 NKIRAS2 NFKB inhibitor interacting Ras like 2 2 2
MIRT225108 GOLGA7 golgin A7 2 2
MIRT376288 CALM3 calmodulin 3 2 2
MIRT454810 NEDD9 neural precursor cell expressed, developmentally down-regulated 9 2 2
MIRT464228 VEGFA vascular endothelial growth factor A 2 6
MIRT466961 STAT3 signal transducer and activator of transcription 3 2 2
MIRT468219 SGK1 serum/glucocorticoid regulated kinase 1 2 2
MIRT472460 NASP nuclear autoantigenic sperm protein 2 2
MIRT474203 LEPRE1 prolyl 3-hydroxylase 1 1 1
MIRT475836 HDGF heparin binding growth factor 2 4
MIRT478667 CTC1 CST telomere replication complex component 1 2 14
MIRT478707 CSRNP2 cysteine and serine rich nuclear protein 2 2 2
MIRT478982 COMMD2 COMM domain containing 2 2 2
MIRT479693 CCNT2 cyclin T2 2 6
MIRT488440 ULBP2 UL16 binding protein 2 2 2
MIRT492511 RAET1L retinoic acid early transcript 1L 2 2
MIRT492975 NCS1 neuronal calcium sensor 1 2 2
MIRT494158 COL4A1 collagen type IV alpha 1 chain 2 6
MIRT495934 SLC7A5P2 solute carrier family 7 member 5 pseudogene 2 2 2
MIRT496210 PLEKHG2 pleckstrin homology and RhoGEF domain containing G2 2 2
MIRT496356 PPY pancreatic polypeptide 2 2
MIRT496385 ZC3H6 zinc finger CCCH-type containing 6 2 2
MIRT496463 DCTN5 dynactin subunit 5 2 2
MIRT497642 GLDN gliomedin 2 2
MIRT498496 FRK fyn related Src family tyrosine kinase 2 2
MIRT501928 MCL1 MCL1, BCL2 family apoptosis regulator 2 8
MIRT513286 PDPK1 3-phosphoinositide dependent protein kinase 1 2 2
MIRT514767 RBM4B RNA binding motif protein 4B 2 2
MIRT514916 MDM2 MDM2 proto-oncogene 2 6
MIRT515669 LRRC27 leucine rich repeat containing 27 2 2
MIRT520367 UBE2G2 ubiquitin conjugating enzyme E2 G2 2 2
MIRT523960 DYNLT1 dynein light chain Tctex-type 1 2 4
MIRT526859 KIFC1 kinesin family member C1 2 2
MIRT527673 CASP8 caspase 8 2 2
MIRT527828 TMEM74B transmembrane protein 74B 2 2
MIRT529553 EI24 EI24, autophagy associated transmembrane protein 2 2
MIRT530547 SYNPO synaptopodin 2 2
MIRT531725 TARS threonyl-tRNA synthetase 2 2
MIRT533340 UNC119B unc-119 lipid binding chaperone B 2 2
MIRT533620 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT537226 GAN gigaxonin 2 2
MIRT544430 ZNF460 zinc finger protein 460 2 4
MIRT546905 PTP4A1 protein tyrosine phosphatase type IVA, member 1 2 2
MIRT547102 PLAG1 PLAG1 zinc finger 2 2
MIRT547820 ISG20L2 interferon stimulated exonuclease gene 20 like 2 2 2
MIRT548236 FEM1B fem-1 homolog B 2 2
MIRT550034 WWTR1 WW domain containing transcription regulator 1 2 2
MIRT554337 SH3GLB1 SH3 domain containing GRB2 like, endophilin B1 2 4
MIRT565483 SPRTN SprT-like N-terminal domain 2 2
MIRT568200 CBX6 chromobox 6 2 2
MIRT569754 C2orf71 chromosome 2 open reading frame 71 2 2
MIRT571369 ZNF45 zinc finger protein 45 2 2
MIRT609886 CLASP1 cytoplasmic linker associated protein 1 2 4
MIRT640543 C3orf36 chromosome 3 open reading frame 36 2 2
MIRT640885 ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 2 2
MIRT643494 LRCH3 leucine rich repeats and calponin homology domain containing 3 2 2
MIRT643627 YY2 YY2 transcription factor 2 2
MIRT644384 ZNF286A zinc finger protein 286A 2 2
MIRT646126 SLC26A9 solute carrier family 26 member 9 2 2
MIRT655939 NDUFA4P1 NDUFA4, mitochondrial complex associated pseudogene 1 2 2
MIRT656057 MYLK4 myosin light chain kinase family member 4 2 2
MIRT658767 EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 2 2
MIRT661583 EPHX2 epoxide hydrolase 2 2 2
MIRT664285 RNMTL1 mitochondrial rRNA methyltransferase 3 2 2
MIRT689391 ZNF850 zinc finger protein 850 2 2
MIRT694530 TRIM72 tripartite motif containing 72 2 2
MIRT694626 ZFPM1 zinc finger protein, FOG family member 1 2 2
MIRT695133 PRY2 PTPN13-like, Y-linked 2 2 2
MIRT695150 PRY PTPN13-like, Y-linked 2 2
MIRT697468 ZC3H4 zinc finger CCCH-type containing 4 2 2
MIRT701919 MLXIP MLX interacting protein 2 2
MIRT704548 CNBP CCHC-type zinc finger nucleic acid binding protein 2 2
MIRT704791 CDK6 cyclin dependent kinase 6 2 2
MIRT705696 ANKRD13A ankyrin repeat domain 13A 2 2
MIRT707992 OTUD4 OTU deubiquitinase 4 2 2
MIRT708739 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT713401 FAM179A TOG array regulator of axonemal microtubules 2 2 2
MIRT713846 FAM3D family with sequence similarity 3 member D 2 2
MIRT716998 ARL6IP4 ADP ribosylation factor like GTPase 6 interacting protein 4 2 2
MIRT718511 DIRAS1 DIRAS family GTPase 1 2 2
MIRT718698 BTBD9 BTB domain containing 9 2 2
MIRT719578 TYRO3 TYRO3 protein tyrosine kinase 2 2
MIRT720892 CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 2 2
MIRT722633 C8A complement C8 alpha chain 2 2
MIRT723333 DGAT1 diacylglycerol O-acyltransferase 1 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-6871-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-6871-3p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-6871-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-6871-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)

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