pre-miRNA Information
pre-miRNA hsa-mir-4282   
Genomic Coordinates chr6: 72967687 - 72967753
Description Homo sapiens miR-4282 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4282
Sequence 40| UAAAAUUUGCAUCCAGGA |57
Evidence Experimental
Experiments SOLiD
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN32074657 13 COSMIC
COSN6331413 18 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1195771339 5 dbSNP
rs755058572 6 dbSNP
rs1245753664 11 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol EPN2   
Synonyms EHB21
Description epsin 2
Transcript NM_001102664   
Other Transcripts NM_014964 , NM_148921   
Expression
Putative miRNA Targets on EPN2
3'UTR of EPN2
(miRNA target sites are highlighted)
>EPN2|NM_001102664|3'UTR
   1 TGCCTGGGCCTGGGACCCACCCAGAGCACCTGTGCTGGAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAA
  81 GAGTTTGGGGATTAGGGGTATTAGGGCTTTTCAGCTCCAGCTTCCTGATGAAAGGGCTGTCTTTACAGCCCCAACCCTCA
 161 GACCCTCGCCTTCCAAGGCAGGCCCCTCAGCCTGGCCTGCTCTCACCACCTCCTCCAAAGCACTGAGGTCCTGGCAGGGC
 241 TCCTCTGAGGCCTTGGACGAGGACGTGGAGTCATCAGTGTTGCCCTTGCCCCTAACCTCAGCCCGAGGGTCTCCAGGATG
 321 TTGCCTGGCCCAGGACTTGGGACAGTGGCCTTGTCTTTGTCCTCCCCACCCCCCAGCCCTAGGGACACCCCAGGCAGTCC
 401 TGGGTGTGGACACGATGAAGCACCGGCTCCATAAGACACCTTTTGGGGAAGTGGTTGTGCATATTTTATTTTTCTTTGAC
 481 TCGTGTGAGTTCAAAGTAAACACCACCACCGTGGACAACTCTTGAATTAAATCCACTAGAGCGAGCTTTAAAACTAATCT
 561 GAGCATAACCCCCAACGTGGCTCTATGCTTGTGTACCTTTGCACATATTTTGTTTAGTACAGTTTCATATTTGAGTTTGC
 641 AGAATTATCTAATAGTCTTTTTTTGGCTAATATTTTTATAACGTGGTTCTTATTTAACTGTCTAGTTTTGATAGAATTTA
 721 CCAGGTCTGGCTGAATGAAGATGTTGGCACGTGTCATTTTAGTGGTTTAAATCCTCTTATTTATGGTTTTAACTCTAAGA
 801 AAATTTTAAAAGGAAGAGATGTTTGGATGACAAAAAAATGCCTTATTGAAAAACTAAAGCAAATTCTTTATAGGAAGAAA
 881 ATATGGGAATTTGATTACACATAGATGATGATGTTTATTTAAAAAAAAAACAACAGCAACAAAAAATCCTAGCCTCCAGT
 961 TGCCTTTTCCTTTCTTTAGCTCCTGTTTTTGGTGAATTACTAAACTGATTGACTTTCAGCCTTTTTGGCTAGATCCTGAG
1041 AGGCTATTTTTCTTACGAATATACCAACATCCTGAAAGTTAAAGAAAAAAATCTAATGTATGAATGTGACTCACCAATTT
1121 TTATCAACTAATTCCTTTTTTTTATTAAAGGCATGCAGGGATTAACAGGACTTCTGTTTACAATGGAAATCTGAAATGGA
1201 AGAAACATCTTTAACCTTGTGTGTCTGTGATCTCCTCTGTCTTAATCCACGCTCAGGCTAAAGATGGGGATAATGTGGAA
1281 ATGGCAGTTGTCCCGAGGGCGTGGGGTGGGGGGTGCTTCTGTGCCCACGGGTCCCTGGGCAACAGTCCCTAGGCTAAGAC
1361 AGGGGTGGGGGGCTAAGGGACCAGGGCTGGCCCTGATCCACCTACCTGCTAACTCCAGATATTATTTTTAAGTTGGAGAC
1441 CTAAAAATAATTCTCTTGTATTTTGGAGATGAAGAAAAAAGTCATTCACCTGGGAGGGATTTTTAACAAACATGCACTAA
1521 TATTACCTCCCTCTTCCAAACTCCTACTGTCCTCACCTCACCCACCACTGTAAAAGTATTACGTCGTGCATTAAAGACCA
1601 GAAAAGACTTGCTTTTACCCAGGGAGGGGACATTCCCCCAATCCTGTGTCTGGGCAGCTTGCCTGGTGGATGTTTCTGGC
1681 CCTTTTTCCACCATGGGAATTTCTCACCTCTAGCTCTAAGGGCAGCTGACCACCTGCCAGCCCCTCTCTGGTTCCAGAAG
1761 ATTACCCTTCGCACCGGCACAGGAGAGATCTTAAATGGTCTCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGACTGC
1841 ACCCACTCATGCTGTTCCTGAGGCCGCCCTCTCCAGTCCCAGGAGCCGTGTCTAGAGTTCCTGACCAGCCACCTTCTGCC
1921 AGAACTGCAGGCCTGCGGCTGGGTCTTAGGCTCCCGCTGCCATTTGGGTAAGCCGGTGGCTGGTCTCGTCTGCCGGGGGA
2001 AGGGTGGGGAGGTGCAATGGGATGGGAGGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAGACGGTGCAGGGCCTGGG
2081 CCAGCCTTACAGGTCAGTAGACTAGACTCGACTACTTGGGGTCAGTGATTCTTTTGTAACGAGTCTTTCATGATGTGACT
2161 TTGAGGCCCCAACATGACAGCCACTGGGCCACCGGGACCCAAGAAGACAGCCCCCTGCCCCATCTTCTGGCACAGGCCAT
2241 CCCGAGTGCATGTCCCTGTTGCCCACTGCACTGATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATC
2321 GTGCTCCCTCCTGATGGGCACCGTGGTGGAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGCCGGTGGCTGGTTTTGA
2401 ACTTGTGTTGACTGTTGATACTTATTTACTGTATAAATATAATTTATCATTTGTACCATGA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' aggACC--UACGUUUAAAAu 5'
             |||  :|||| ||||| 
Target 5' aagTGGTTGTGCATATTTTa 3'
449 - 468 129.00 -9.00
2
miRNA  3' agGACCUACGUUUAAAAu 5'
            ||||: | ::||||| 
Target 5' acCTGGGAG-GGATTTTt 3'
1488 - 1504 123.00 -12.20
3
miRNA  3' aggaccUACGUUUAAAau 5'
                ||| :|||||  
Target 5' tccaccATGGGAATTTct 3'
1687 - 1704 116.00 -5.20
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30723780 31 COSMIC
COSN26664106 46 COSMIC
COSN31562091 62 COSMIC
COSN21991974 82 COSMIC
COSN16684603 274 COSMIC
COSN32065742 455 COSMIC
COSN23104677 665 COSMIC
COSN31519759 715 COSMIC
COSN25051260 736 COSMIC
COSN31545313 815 COSMIC
COSN26602213 921 COSMIC
COSN20082007 931 COSMIC
COSN28887603 931 COSMIC
COSN16131782 1126 COSMIC
COSN21082220 1131 COSMIC
COSN30552902 1144 COSMIC
COSN30677842 1144 COSMIC
COSN31786571 1156 COSMIC
COSN19736449 1161 COSMIC
COSN30684631 1193 COSMIC
COSN30760321 1236 COSMIC
COSN31571457 1289 COSMIC
COSN19730560 1302 COSMIC
COSN6100241 1389 COSMIC
COSN1193890 1403 COSMIC
COSN20093232 1672 COSMIC
COSN31522888 2271 COSMIC
COSN31557402 2300 COSMIC
COSN24294754 2343 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1349249819 1 dbSNP
rs766845794 2 dbSNP
rs752173474 3 dbSNP
rs762520489 9 dbSNP
rs1186934411 10 dbSNP
rs1257908021 12 dbSNP
rs1434364973 12 dbSNP
rs1425368412 18 dbSNP
rs377601015 20 dbSNP
rs913284287 35 dbSNP
rs1325663465 37 dbSNP
rs11656071 47 dbSNP
rs946229421 48 dbSNP
rs1161633292 50 dbSNP
rs372049446 50 dbSNP
rs1453288076 51 dbSNP
rs1391101673 53 dbSNP
rs928831094 54 dbSNP
rs1329415931 56 dbSNP
rs1448265507 56 dbSNP
rs1248942800 57 dbSNP
rs932207135 59 dbSNP
rs768066009 62 dbSNP
rs1439786214 67 dbSNP
rs1055436615 68 dbSNP
rs1219713045 69 dbSNP
rs750510106 70 dbSNP
rs1343848358 73 dbSNP
rs1275156131 85 dbSNP
rs1285681390 88 dbSNP
rs894160740 91 dbSNP
rs1005951384 92 dbSNP
rs890715049 92 dbSNP
rs368917532 94 dbSNP
rs1037449208 99 dbSNP
rs1330540120 112 dbSNP
rs1244790580 117 dbSNP
rs568378304 118 dbSNP
rs1289032017 119 dbSNP
rs867351729 121 dbSNP
rs1321838001 122 dbSNP
rs897587021 124 dbSNP
rs1015102045 126 dbSNP
rs1371388579 131 dbSNP
rs61604929 145 dbSNP
rs1027308931 150 dbSNP
rs1030142451 156 dbSNP
rs572060429 157 dbSNP
rs1437697613 166 dbSNP
rs1478072018 168 dbSNP
rs150226519 169 dbSNP
rs969107800 174 dbSNP
rs1196629034 177 dbSNP
rs1483858405 177 dbSNP
rs560702626 184 dbSNP
rs1204212276 186 dbSNP
rs1305506159 195 dbSNP
rs1280670156 196 dbSNP
rs1034916976 203 dbSNP
rs766611555 204 dbSNP
rs1239573500 207 dbSNP
rs1411717481 226 dbSNP
rs1351380000 248 dbSNP
rs1007918975 253 dbSNP
rs1018258811 259 dbSNP
rs964430063 260 dbSNP
rs990241338 265 dbSNP
rs754022487 266 dbSNP
rs1177237480 271 dbSNP
rs1414457723 274 dbSNP
rs1423653724 277 dbSNP
rs1173681545 278 dbSNP
rs73308345 284 dbSNP
rs1412278611 298 dbSNP
rs1180937996 303 dbSNP
rs370598273 305 dbSNP
rs1210546636 306 dbSNP
rs1441821223 313 dbSNP
rs928800343 317 dbSNP
rs1261145345 333 dbSNP
rs1230341569 335 dbSNP
rs1329879860 343 dbSNP
rs938932989 345 dbSNP
rs946128237 346 dbSNP
rs34106224 364 dbSNP
rs978845252 366 dbSNP
rs1303838502 368 dbSNP
rs1389539512 369 dbSNP
rs926048431 369 dbSNP
rs931971760 369 dbSNP
rs1458374784 370 dbSNP
rs1050864828 373 dbSNP
rs890673130 383 dbSNP
rs1417000975 384 dbSNP
rs944977918 393 dbSNP
rs1182277704 401 dbSNP
rs1472320663 404 dbSNP
rs1241223639 407 dbSNP
rs542893176 410 dbSNP
rs1383246483 412 dbSNP
rs1465288350 414 dbSNP
rs915572671 415 dbSNP
rs562593111 422 dbSNP
rs1313654959 424 dbSNP
rs994567576 425 dbSNP
rs1027385454 426 dbSNP
rs1037332127 432 dbSNP
rs1300457776 440 dbSNP
rs531590283 441 dbSNP
rs897557297 442 dbSNP
rs929074045 445 dbSNP
rs1001845173 453 dbSNP
rs1051536202 454 dbSNP
rs1035102216 455 dbSNP
rs778518343 460 dbSNP
rs747965530 469 dbSNP
rs1007475535 474 dbSNP
rs1017970983 483 dbSNP
rs551709705 484 dbSNP
rs960654857 486 dbSNP
rs988052584 495 dbSNP
rs1339384446 496 dbSNP
rs1190256039 500 dbSNP
rs1194570321 501 dbSNP
rs1450059561 505 dbSNP
rs192302765 511 dbSNP
rs1184886461 512 dbSNP
rs1011950576 513 dbSNP
rs1021651486 515 dbSNP
rs1266273169 521 dbSNP
rs1221028753 522 dbSNP
rs967426538 535 dbSNP
rs977531740 540 dbSNP
rs1035841890 543 dbSNP
rs979247514 544 dbSNP
rs533859654 549 dbSNP
rs960523629 557 dbSNP
rs758304514 576 dbSNP
rs185312902 577 dbSNP
rs1194000928 578 dbSNP
rs1293600469 586 dbSNP
rs771577330 587 dbSNP
rs188528293 592 dbSNP
rs774503978 594 dbSNP
rs1174224750 602 dbSNP
rs193146397 609 dbSNP
rs567451368 610 dbSNP
rs78237605 613 dbSNP
rs1045824 619 dbSNP
rs1372450129 629 dbSNP
rs1334395051 652 dbSNP
rs944925458 658 dbSNP
rs918954350 659 dbSNP
rs1390388011 666 dbSNP
rs1382431304 667 dbSNP
rs1434982224 667 dbSNP
rs1294302443 668 dbSNP
rs1190676403 669 dbSNP
rs1324151999 670 dbSNP
rs1036636824 671 dbSNP
rs1285782760 673 dbSNP
rs1324833460 683 dbSNP
rs550095775 684 dbSNP
rs929041092 699 dbSNP
rs1341840708 703 dbSNP
rs1250143112 722 dbSNP
rs930772053 728 dbSNP
rs138026134 744 dbSNP
rs890286162 747 dbSNP
rs539018781 751 dbSNP
rs1002403633 752 dbSNP
rs1309414116 754 dbSNP
rs1038867203 757 dbSNP
rs558498742 761 dbSNP
rs1056126397 765 dbSNP
rs893688420 785 dbSNP
rs1467578444 796 dbSNP
rs1205933025 797 dbSNP
rs1010840782 798 dbSNP
rs1414498441 800 dbSNP
rs1021622367 801 dbSNP
rs565655813 802 dbSNP
rs1009421335 832 dbSNP
rs534701507 834 dbSNP
rs903206783 841 dbSNP
rs539497657 847 dbSNP
rs1036150205 855 dbSNP
rs1483886505 859 dbSNP
rs960154391 861 dbSNP
rs556333035 863 dbSNP
rs1028613700 872 dbSNP
rs1023147510 882 dbSNP
rs573894065 885 dbSNP
rs1289836857 888 dbSNP
rs1228695368 897 dbSNP
rs953479307 902 dbSNP
rs986647162 904 dbSNP
rs1390545029 912 dbSNP
rs973650755 913 dbSNP
rs557846055 920 dbSNP
rs140366250 921 dbSNP
rs918923297 921 dbSNP
rs919477160 921 dbSNP
rs966008680 921 dbSNP
rs930886248 922 dbSNP
rs1362246205 927 dbSNP
rs575660522 929 dbSNP
rs1424710059 931 dbSNP
rs1049228476 932 dbSNP
rs950423496 933 dbSNP
rs926820033 934 dbSNP
rs1269540781 939 dbSNP
rs937763114 949 dbSNP
rs1349561169 959 dbSNP
rs1277372276 966 dbSNP
rs542958262 979 dbSNP
rs896252886 980 dbSNP
rs1382273879 993 dbSNP
rs1450447488 999 dbSNP
rs8068626 1004 dbSNP
rs1321344973 1006 dbSNP
rs1303169445 1010 dbSNP
rs1383104000 1011 dbSNP
rs1042038666 1016 dbSNP
rs769556016 1018 dbSNP
rs943150281 1019 dbSNP
rs1182116269 1022 dbSNP
rs1451934979 1025 dbSNP
rs1249158430 1027 dbSNP
rs1223435984 1029 dbSNP
rs1028142285 1030 dbSNP
rs954035085 1032 dbSNP
rs1281717087 1034 dbSNP
rs1008078183 1036 dbSNP
rs184887051 1038 dbSNP
rs1019014040 1042 dbSNP
rs1039248701 1045 dbSNP
rs1243457842 1047 dbSNP
rs796582880 1047 dbSNP
rs915106654 1058 dbSNP
rs946596963 1060 dbSNP
rs373473878 1066 dbSNP
rs1319083148 1067 dbSNP
rs966128252 1081 dbSNP
rs1324689518 1085 dbSNP
rs1042367454 1096 dbSNP
rs1026358693 1102 dbSNP
rs545092871 1107 dbSNP
rs866631087 1110 dbSNP
rs143670238 1115 dbSNP
rs1398157392 1118 dbSNP
rs1305482410 1125 dbSNP
rs952323707 1128 dbSNP
rs998817966 1128 dbSNP
rs1239105008 1129 dbSNP
rs1317000611 1132 dbSNP
rs768548597 1132 dbSNP
rs985475948 1134 dbSNP
rs1490422732 1136 dbSNP
rs780936813 1136 dbSNP
rs1244548450 1144 dbSNP
rs1345150002 1144 dbSNP
rs1209659778 1145 dbSNP
rs1280605585 1147 dbSNP
rs1484078829 1152 dbSNP
rs774644390 1152 dbSNP
rs750275983 1153 dbSNP
rs1220003933 1155 dbSNP
rs756052183 1156 dbSNP
rs779893240 1159 dbSNP
rs1179308968 1160 dbSNP
rs1273628629 1171 dbSNP
rs1382194239 1171 dbSNP
rs1452690139 1172 dbSNP
rs1173172172 1175 dbSNP
rs1359974794 1180 dbSNP
rs1213977936 1184 dbSNP
rs992347222 1196 dbSNP
rs1276733151 1216 dbSNP
rs1234023124 1217 dbSNP
rs1467901905 1219 dbSNP
rs1474228219 1221 dbSNP
rs1345153750 1227 dbSNP
rs1301477974 1228 dbSNP
rs1396383569 1238 dbSNP
rs1412085479 1244 dbSNP
rs1371488604 1246 dbSNP
rs895861305 1246 dbSNP
rs1408777428 1249 dbSNP
rs1427843247 1250 dbSNP
rs527816296 1251 dbSNP
rs917626737 1252 dbSNP
rs1197158191 1255 dbSNP
rs1428180787 1269 dbSNP
rs1409935485 1270 dbSNP
rs1419487013 1283 dbSNP
rs541492630 1288 dbSNP
rs1023538066 1295 dbSNP
rs903556984 1296 dbSNP
rs936582133 1301 dbSNP
rs963555108 1302 dbSNP
rs1361718476 1306 dbSNP
rs1459060040 1308 dbSNP
rs1163743678 1309 dbSNP
rs889720437 1311 dbSNP
rs1187349790 1313 dbSNP
rs1008445313 1314 dbSNP
rs1404932928 1324 dbSNP
rs995044422 1329 dbSNP
rs1026488567 1339 dbSNP
rs1376121255 1340 dbSNP
rs1440418008 1343 dbSNP
rs1392360343 1346 dbSNP
rs561113661 1350 dbSNP
rs950968731 1353 dbSNP
rs762207265 1358 dbSNP
rs1248425929 1361 dbSNP
rs911573077 1361 dbSNP
rs529904622 1368 dbSNP
rs1473395370 1370 dbSNP
rs964802507 1371 dbSNP
rs1408220076 1373 dbSNP
rs1026307639 1379 dbSNP
rs974541574 1387 dbSNP
rs915056323 1393 dbSNP
rs946565955 1400 dbSNP
rs1239151207 1406 dbSNP
rs1460814385 1409 dbSNP
rs1210648415 1410 dbSNP
rs952167122 1412 dbSNP
rs188613123 1414 dbSNP
rs1042247833 1423 dbSNP
rs1283767664 1425 dbSNP
rs1222435928 1439 dbSNP
rs1381712402 1441 dbSNP
rs1220293451 1450 dbSNP
rs984827741 1452 dbSNP
rs1381193978 1454 dbSNP
rs1480884410 1456 dbSNP
rs1034312572 1467 dbSNP
rs1176414013 1472 dbSNP
rs959652255 1473 dbSNP
rs1345443579 1475 dbSNP
rs576556273 1476 dbSNP
rs923831131 1482 dbSNP
rs1398749236 1484 dbSNP
rs1183957235 1486 dbSNP
rs775620057 1490 dbSNP
rs918118124 1507 dbSNP
rs767958495 1512 dbSNP
rs945114206 1513 dbSNP
rs1241749379 1514 dbSNP
rs1213999303 1516 dbSNP
rs1057438577 1527 dbSNP
rs1293016820 1530 dbSNP
rs540450244 1531 dbSNP
rs1163804930 1532 dbSNP
rs1300387062 1541 dbSNP
rs1383431130 1542 dbSNP
rs3803839 1544 dbSNP
rs1013417628 1547 dbSNP
rs1428284096 1548 dbSNP
rs1367027321 1549 dbSNP
rs555767920 1558 dbSNP
rs1423722755 1560 dbSNP
rs531704557 1565 dbSNP
rs1170336230 1567 dbSNP
rs775607825 1572 dbSNP
rs899265539 1583 dbSNP
rs994924304 1584 dbSNP
rs1026456084 1587 dbSNP
rs1489609950 1608 dbSNP
rs1269817922 1610 dbSNP
rs1298020833 1610 dbSNP
rs944009815 1611 dbSNP
rs1454815288 1623 dbSNP
rs1040893898 1625 dbSNP
rs897020793 1629 dbSNP
rs1307413539 1630 dbSNP
rs1294293035 1634 dbSNP
rs1316026976 1636 dbSNP
rs1212266610 1638 dbSNP
rs993564755 1641 dbSNP
rs886662784 1642 dbSNP
rs1404113441 1644 dbSNP
rs1009179700 1663 dbSNP
rs1299655168 1669 dbSNP
rs572662403 1672 dbSNP
rs1275124110 1675 dbSNP
rs374422521 1677 dbSNP
rs1308071963 1678 dbSNP
rs1372394499 1678 dbSNP
rs1203719249 1687 dbSNP
rs1249454192 1688 dbSNP
rs1462463829 1693 dbSNP
rs1198890281 1696 dbSNP
rs1043808 1707 dbSNP
rs1242174347 1708 dbSNP
rs765011652 1713 dbSNP
rs1196724155 1717 dbSNP
rs551921749 1718 dbSNP
rs1022019397 1724 dbSNP
rs905478475 1733 dbSNP
rs565650460 1734 dbSNP
rs534468050 1736 dbSNP
rs1013819726 1737 dbSNP
rs142898989 1738 dbSNP
rs1222585454 1742 dbSNP
rs1337737167 1745 dbSNP
rs1308924808 1750 dbSNP
rs966824608 1752 dbSNP
rs1395707974 1756 dbSNP
rs1405628793 1764 dbSNP
rs745875893 1767 dbSNP
rs939233439 1771 dbSNP
rs992130046 1772 dbSNP
rs1407016558 1774 dbSNP
rs917233292 1776 dbSNP
rs948717544 1777 dbSNP
rs1362726672 1778 dbSNP
rs1183024196 1784 dbSNP
rs567778553 1791 dbSNP
rs1184178925 1798 dbSNP
rs899229615 1806 dbSNP
rs1462145763 1810 dbSNP
rs754077521 1814 dbSNP
rs1325537469 1817 dbSNP
rs1321004322 1820 dbSNP
rs1204079125 1823 dbSNP
rs985530155 1827 dbSNP
rs910925890 1835 dbSNP
rs1334885888 1836 dbSNP
rs943925046 1843 dbSNP
rs1454573582 1844 dbSNP
rs1383416532 1852 dbSNP
rs1262205564 1857 dbSNP
rs1336208072 1857 dbSNP
rs930741165 1859 dbSNP
rs536448349 1860 dbSNP
rs1159308143 1865 dbSNP
rs1043809 1866 dbSNP
rs1362478890 1867 dbSNP
rs576677837 1870 dbSNP
rs1445804868 1875 dbSNP
rs1019227339 1880 dbSNP
rs1182469870 1884 dbSNP
rs900758679 1886 dbSNP
rs929766042 1888 dbSNP
rs765465178 1889 dbSNP
rs1021982330 1898 dbSNP
rs868255836 1899 dbSNP
rs1205426771 1900 dbSNP
rs1349488820 1904 dbSNP
rs545665388 1906 dbSNP
rs1247859984 1920 dbSNP
rs1360116594 1924 dbSNP
rs1422126054 1928 dbSNP
rs1314237657 1934 dbSNP
rs558708798 1935 dbSNP
rs572399778 1937 dbSNP
rs541208011 1938 dbSNP
rs71369416 1950 dbSNP
rs1030838043 1952 dbSNP
rs960607434 1954 dbSNP
rs147342749 1956 dbSNP
rs1413031624 1957 dbSNP
rs916464360 1965 dbSNP
rs752479374 1975 dbSNP
rs980040918 1976 dbSNP
rs1430133839 1981 dbSNP
rs1446107677 1989 dbSNP
rs920623119 1995 dbSNP
rs1025150150 1996 dbSNP
rs966939135 1997 dbSNP
rs999611648 2001 dbSNP
rs559545390 2004 dbSNP
rs191484939 2007 dbSNP
rs888316886 2007 dbSNP
rs1347329909 2018 dbSNP
rs1226725756 2024 dbSNP
rs777599586 2026 dbSNP
rs1224047159 2028 dbSNP
rs1047840862 2033 dbSNP
rs886600679 2036 dbSNP
rs1412180594 2038 dbSNP
rs985258137 2041 dbSNP
rs1168024529 2045 dbSNP
rs1474769326 2055 dbSNP
rs543657983 2060 dbSNP
rs1421043221 2063 dbSNP
rs563458757 2066 dbSNP
rs148411013 2067 dbSNP
rs976427959 2070 dbSNP
rs918474069 2074 dbSNP
rs900725491 2077 dbSNP
rs552445181 2079 dbSNP
rs1316070008 2081 dbSNP
rs756839046 2091 dbSNP
rs559127511 2093 dbSNP
rs1446000067 2094 dbSNP
rs1043394818 2110 dbSNP
rs903562290 2120 dbSNP
rs1270408577 2128 dbSNP
rs878891161 2132 dbSNP
rs111954981 2136 dbSNP
rs745366536 2141 dbSNP
rs1408871484 2142 dbSNP
rs1397586050 2143 dbSNP
rs1268676253 2146 dbSNP
rs960742176 2149 dbSNP
rs1470029941 2153 dbSNP
rs1013394157 2154 dbSNP
rs1013504157 2157 dbSNP
rs1477263754 2158 dbSNP
rs1160608246 2160 dbSNP
rs1046383451 2162 dbSNP
rs1265135847 2163 dbSNP
rs1204353660 2169 dbSNP
rs902772412 2170 dbSNP
rs547740164 2173 dbSNP
rs1400277288 2175 dbSNP
rs1032913009 2183 dbSNP
rs1157004021 2190 dbSNP
rs893999896 2192 dbSNP
rs1385573712 2193 dbSNP
rs142556372 2195 dbSNP
rs1017996454 2206 dbSNP
rs1404916834 2208 dbSNP
rs536712783 2209 dbSNP
rs1402080329 2210 dbSNP
rs1302504775 2211 dbSNP
rs1157761580 2212 dbSNP
rs1329222954 2217 dbSNP
rs1444122730 2218 dbSNP
rs1279850787 2220 dbSNP
rs1244853365 2224 dbSNP
rs1043816 2225 dbSNP
rs1043819 2228 dbSNP
rs976376968 2230 dbSNP
rs973982836 2242 dbSNP
rs1025348292 2244 dbSNP
rs754469222 2245 dbSNP
rs1284054449 2256 dbSNP
rs984078584 2257 dbSNP
rs1359501039 2262 dbSNP
rs909806958 2269 dbSNP
rs1316271221 2276 dbSNP
rs1221040067 2277 dbSNP
rs937159509 2278 dbSNP
rs991737097 2279 dbSNP
rs916622330 2280 dbSNP
rs1450331653 2285 dbSNP
rs189482782 2288 dbSNP
rs748485720 2289 dbSNP
rs1233817269 2297 dbSNP
rs952080016 2300 dbSNP
rs1469872839 2301 dbSNP
rs1046377014 2305 dbSNP
rs1443933733 2308 dbSNP
rs983424505 2309 dbSNP
rs1411794544 2310 dbSNP
rs1188324236 2318 dbSNP
rs902553360 2322 dbSNP
rs1176981357 2324 dbSNP
rs767176598 2327 dbSNP
rs1054018452 2328 dbSNP
rs1292953776 2334 dbSNP
rs894064070 2335 dbSNP
rs1320421295 2343 dbSNP
rs907913815 2344 dbSNP
rs944800689 2347 dbSNP
rs1162941653 2355 dbSNP
rs570209285 2360 dbSNP
rs1388490072 2367 dbSNP
rs1043830 2371 dbSNP
rs1007025385 2380 dbSNP
rs1040534242 2383 dbSNP
rs1367294271 2386 dbSNP
rs900914926 2400 dbSNP
rs1457393097 2401 dbSNP
rs997963446 2402 dbSNP
rs922118413 2406 dbSNP
rs1172648906 2408 dbSNP
rs539010231 2412 dbSNP
rs1429133387 2413 dbSNP
rs181949705 2415 dbSNP
rs1044037301 2416 dbSNP
rs904114940 2418 dbSNP
rs1316756209 2420 dbSNP
rs1383007426 2424 dbSNP
rs984203808 2425 dbSNP
rs999155012 2426 dbSNP
rs1052121693 2432 dbSNP
rs1206023680 2432 dbSNP
rs533197191 2435 dbSNP
rs1256867992 2440 dbSNP
rs1216480396 2447 dbSNP
rs1346984297 2449 dbSNP
rs896206129 2454 dbSNP
rs958873022 2459 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084064. RNA binding protein: AGO2. Condition:CLIP_noemetine_AbnovaAb HITS-CLIP data was present in GSM1084065. RNA binding protein: AGO2. Condition:CLIP_emetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084064
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noemetine_AbnovaAb
Location of target site ENST00000314728.5 | 3UTR | AAAAGGAAGAGAUGUUUGGAUGAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1084065
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_emetine_AbnovaAb
Location of target site ENST00000314728.5 | 3UTR | AAAAGGAAGAGAUGUUUGGAUGAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
280 hsa-miR-4282 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT057628 LCOR ligand dependent nuclear receptor corepressor 2 2
MIRT060732 RPS3 ribosomal protein S3 2 2
MIRT063371 ETNK1 ethanolamine kinase 1 2 2
MIRT066257 LRIG3 leucine rich repeats and immunoglobulin like domains 3 2 4
MIRT070774 HIF1A hypoxia inducible factor 1 alpha subunit 2 2
MIRT070871 EIF2S1 eukaryotic translation initiation factor 2 subunit alpha 2 4
MIRT078056 PCTP phosphatidylcholine transfer protein 2 2
MIRT078408 DCAF7 DDB1 and CUL4 associated factor 7 2 4
MIRT084059 PPP1R3D protein phosphatase 1 regulatory subunit 3D 2 2
MIRT093537 GALNT7 polypeptide N-acetylgalactosaminyltransferase 7 2 6
MIRT096072 SFXN1 sideroflexin 1 2 2
MIRT098316 REV3L REV3 like, DNA directed polymerase zeta catalytic subunit 2 2
MIRT100493 UHRF1BP1 UHRF1 binding protein 1 2 2
MIRT102254 HBP1 HMG-box transcription factor 1 2 4
MIRT105318 VPS37A VPS37A, ESCRT-I subunit 2 2
MIRT114143 MZT1 mitotic spindle organizing protein 1 2 4
MIRT114873 DICER1 dicer 1, ribonuclease III 2 2
MIRT134683 PNRC2 proline rich nuclear receptor coactivator 2 2 2
MIRT137640 RCOR1 REST corepressor 1 2 2
MIRT155449 CCNT2 cyclin T2 2 4
MIRT165656 DCTN4 dynactin subunit 4 2 2
MIRT177570 CSTF2T cleavage stimulation factor subunit 2 tau variant 2 4
MIRT188514 E2F7 E2F transcription factor 7 2 10
MIRT193019 TMOD3 tropomodulin 3 2 4
MIRT195823 GADD45A growth arrest and DNA damage inducible alpha 2 2
MIRT195885 DEPDC1 DEP domain containing 1 2 6
MIRT206029 NUP50 nucleoporin 50 2 6
MIRT212148 CLCN3 chloride voltage-gated channel 3 2 2
MIRT213999 DCP2 decapping mRNA 2 2 2
MIRT214650 HNRNPA0 heterogeneous nuclear ribonucleoprotein A0 2 2
MIRT221568 CBX3 chromobox 3 2 2
MIRT224544 ZNF623 zinc finger protein 623 2 2
MIRT227654 SET SET nuclear proto-oncogene 2 2
MIRT229992 CHIC1 cysteine rich hydrophobic domain 1 2 2
MIRT238968 QKI QKI, KH domain containing RNA binding 2 2
MIRT239825 ACTB actin beta 2 2
MIRT241084 ZXDA zinc finger, X-linked, duplicated A 2 4
MIRT244852 ZBTB5 zinc finger and BTB domain containing 5 2 2
MIRT264534 TARDBP TAR DNA binding protein 2 2
MIRT271438 SKI SKI proto-oncogene 2 2
MIRT271597 ENAH ENAH, actin regulator 2 2
MIRT294332 ZNF264 zinc finger protein 264 2 2
MIRT296341 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT301715 TEF TEF, PAR bZIP transcription factor 2 2
MIRT308549 ZNF654 zinc finger protein 654 2 2
MIRT313866 DEPDC1B DEP domain containing 1B 2 2
MIRT315529 MARCKS myristoylated alanine rich protein kinase C substrate 2 2
MIRT321066 RABGEF1 RAB guanine nucleotide exchange factor 1 2 2
MIRT343777 NUTF2 nuclear transport factor 2 2 2
MIRT359109 MAP1B microtubule associated protein 1B 2 2
MIRT397393 GOLGA3 golgin A3 2 4
MIRT400822 CPEB2 cytoplasmic polyadenylation element binding protein 2 2 2
MIRT442171 DSEL dermatan sulfate epimerase-like 2 2
MIRT442777 JAG1 jagged 1 2 2
MIRT442862 SCARF1 scavenger receptor class F member 1 2 4
MIRT442919 PCBD2 pterin-4 alpha-carbinolamine dehydratase 2 2 2
MIRT444567 TRA2B transformer 2 beta homolog 2 2
MIRT444718 CMSS1 cms1 ribosomal small subunit homolog (yeast) 2 2
MIRT445018 RBMS3 RNA binding motif single stranded interacting protein 3 2 2
MIRT445853 LRRC1 leucine rich repeat containing 1 2 2
MIRT446242 HELZ helicase with zinc finger 2 2
MIRT446542 GOLGA8B golgin A8 family member B 2 2
MIRT446643 SPTY2D1 SPT2 chromatin protein domain containing 1 2 2
MIRT446948 ZMAT3 zinc finger matrin-type 3 2 4
MIRT447061 KCNAB1 potassium voltage-gated channel subfamily A member regulatory beta subunit 1 2 2
MIRT447327 ZSCAN21 zinc finger and SCAN domain containing 21 2 2
MIRT447995 CDX1 caudal type homeobox 1 2 2
MIRT448543 RHEBP1 RHEB pseudogene 1 2 6
MIRT448752 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT448772 GOLGA8A golgin A8 family member A 2 2
MIRT449342 WDR26 WD repeat domain 26 2 2
MIRT450011 SLC16A6 solute carrier family 16 member 6 2 4
MIRT450229 PCNX pecanex homolog 1 2 2
MIRT450340 MRPL17 mitochondrial ribosomal protein L17 2 4
MIRT450381 MSI2 musashi RNA binding protein 2 2 2
MIRT450759 PGGT1B protein geranylgeranyltransferase type I subunit beta 2 2
MIRT450809 NRCAM neuronal cell adhesion molecule 2 2
MIRT450947 ATAD2 ATPase family, AAA domain containing 2 2 2
MIRT459095 CCPG1 cell cycle progression 1 2 2
MIRT462428 TWISTNB TWIST neighbor 2 2
MIRT465200 TROVE2 TROVE domain family member 2 2 4
MIRT467382 SON SON DNA binding protein 2 4
MIRT468546 SERP1 stress associated endoplasmic reticulum protein 1 2 2
MIRT471506 PDE4D phosphodiesterase 4D 2 2
MIRT471981 NR3C1 nuclear receptor subfamily 3 group C member 1 2 2
MIRT474478 KLHL11 kelch like family member 11 2 8
MIRT475011 KANSL1 KAT8 regulatory NSL complex subunit 1 2 8
MIRT480341 C5orf51 chromosome 5 open reading frame 51 2 2
MIRT482696 TEX9 testis expressed 9 2 6
MIRT483462 YTHDF1 YTH N6-methyladenosine RNA binding protein 1 2 6
MIRT485623 FAM217B family with sequence similarity 217 member B 2 2
MIRT485714 CASP16 caspase 16, pseudogene 2 8
MIRT486279 SEC23A Sec23 homolog A, coat complex II component 2 2
MIRT491000 PEBP1 phosphatidylethanolamine binding protein 1 2 4
MIRT492594 PPIL4 peptidylprolyl isomerase like 4 2 2
MIRT493365 KIF5B kinesin family member 5B 2 2
MIRT494316 CDKN1B cyclin dependent kinase inhibitor 1B 2 2
MIRT495208 EDN3 endothelin 3 2 2
MIRT497011 TCF15 transcription factor 15 2 2
MIRT498512 FRK fyn related Src family tyrosine kinase 2 2
MIRT498778 PARP15 poly(ADP-ribose) polymerase family member 15 2 2
MIRT501045 SMG1 SMG1, nonsense mediated mRNA decay associated PI3K related kinase 2 6
MIRT502939 CDC37L1 cell division cycle 37 like 1 2 8
MIRT504806 VHL von Hippel-Lindau tumor suppressor 2 6
MIRT505656 SHMT1 serine hydroxymethyltransferase 1 2 6
MIRT505964 RAB5C RAB5C, member RAS oncogene family 2 6
MIRT506322 OTUD4 OTU deubiquitinase 4 2 4
MIRT506803 KLHL15 kelch like family member 15 2 6
MIRT506917 KBTBD8 kelch repeat and BTB domain containing 8 2 4
MIRT507400 EMC7 ER membrane protein complex subunit 7 2 8
MIRT507471 EDEM3 ER degradation enhancing alpha-mannosidase like protein 3 2 6
MIRT508058 ATP13A3 ATPase 13A3 2 4
MIRT508135 AMD1 adenosylmethionine decarboxylase 1 2 2
MIRT509895 RPS23 ribosomal protein S23 2 4
MIRT510881 RAN RAN, member RAS oncogene family 2 8
MIRT513766 PEX5L peroxisomal biogenesis factor 5 like 2 4
MIRT516898 COPS8 COP9 signalosome subunit 8 2 2
MIRT518703 TIMD4 T-cell immunoglobulin and mucin domain containing 4 2 4
MIRT520429 TTPAL alpha tocopherol transfer protein like 2 6
MIRT521843 PNISR PNN interacting serine and arginine rich protein 2 4
MIRT522116 NUDT3 nudix hydrolase 3 2 4
MIRT525467 TMPRSS12 transmembrane protease, serine 12 2 2
MIRT525583 MTRNR2L7 MT-RNR2-like 7 2 2
MIRT525906 BUB1 BUB1 mitotic checkpoint serine/threonine kinase 2 2
MIRT526072 C11orf54 chromosome 11 open reading frame 54 2 2
MIRT526232 MTRNR2L5 MT-RNR2-like 5 2 4
MIRT526455 FAM71F2 family with sequence similarity 71 member F2 2 4
MIRT526515 POU5F1B POU class 5 homeobox 1B 2 2
MIRT528032 FEZ2 fasciculation and elongation protein zeta 2 2 2
MIRT528422 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT528995 ISLR2 immunoglobulin superfamily containing leucine rich repeat 2 2 4
MIRT529311 ATRNL1 attractin like 1 2 2
MIRT529376 SKP1 S-phase kinase associated protein 1 2 4
MIRT530015 SRRM1 serine and arginine repetitive matrix 1 2 2
MIRT530089 FMN2 formin 2 2 2
MIRT530942 ENPP6 ectonucleotide pyrophosphatase/phosphodiesterase 6 2 2
MIRT531229 HIST1H2BD histone cluster 1 H2B family member d 2 2
MIRT533088 YTHDF3 YTH N6-methyladenosine RNA binding protein 3 2 2
MIRT533299 USP46 ubiquitin specific peptidase 46 2 2
MIRT533318 UNKL unkempt family like zinc finger 2 2
MIRT533721 TMEM30A transmembrane protein 30A 2 2
MIRT534096 AZF1 azoospermia factor 1 2 2
MIRT534188 SLC7A11 solute carrier family 7 member 11 2 2
MIRT534493 SAR1B secretion associated Ras related GTPase 1B 2 2
MIRT536077 MBOAT2 membrane bound O-acyltransferase domain containing 2 2 2
MIRT536242 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT537524 FAM104A family with sequence similarity 104 member A 2 2
MIRT538088 DGKH diacylglycerol kinase eta 2 2
MIRT538475 CNBP CCHC-type zinc finger nucleic acid binding protein 2 2
MIRT538853 BTG1 BTG anti-proliferation factor 1 2 4
MIRT539075 GDNF glial cell derived neurotrophic factor 2 2
MIRT539480 ACVR2B activin A receptor type 2B 2 4
MIRT540210 ARHGAP18 Rho GTPase activating protein 18 2 2
MIRT541940 TSPAN2 tetraspanin 2 2 2
MIRT543812 COCH cochlin 2 2
MIRT545120 PDZRN4 PDZ domain containing ring finger 4 2 2
MIRT545571 GIMAP4 GTPase, IMAP family member 4 2 2
MIRT545989 XKR4 XK related 4 2 2
MIRT547213 PANK3 pantothenate kinase 3 2 4
MIRT547740 KIAA1468 KIAA1468 2 2
MIRT548022 GRB2 growth factor receptor bound protein 2 2 4
MIRT548032 GOLIM4 golgi integral membrane protein 4 2 2
MIRT548102 GFPT1 glutamine--fructose-6-phosphate transaminase 1 2 4
MIRT548217 FKBP1A FK506 binding protein 1A 2 2
MIRT548588 DDX3X DEAD-box helicase 3, X-linked 2 4
MIRT548953 CDC27 cell division cycle 27 2 2
MIRT549072 CACUL1 CDK2 associated cullin domain 1 2 2
MIRT550368 INCENP inner centromere protein 2 6
MIRT550546 MYZAP myocardial zonula adherens protein 2 2
MIRT551491 TMEM192 transmembrane protein 192 2 4
MIRT553078 UEVLD UEV and lactate/malate dehyrogenase domains 2 2
MIRT554104 SMU1 DNA replication regulator and spliceosomal factor 2 2
MIRT555127 PTPRG protein tyrosine phosphatase, receptor type G 2 2
MIRT555477 POC1B-GALNT4 POC1B-GALNT4 readthrough 2 2
MIRT555978 NPTN neuroplastin 2 2
MIRT557011 HPRT1 hypoxanthine phosphoribosyltransferase 1 2 2
MIRT557706 GALNT4 polypeptide N-acetylgalactosaminyltransferase 4 2 2
MIRT558333 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 4
MIRT558488 DBN1 drebrin 1 2 2
MIRT559942 ZNF567 zinc finger protein 567 2 2
MIRT561127 ATP2B1 ATPase plasma membrane Ca2+ transporting 1 2 2
MIRT561791 PAWR pro-apoptotic WT1 regulator 2 2
MIRT562438 EEF2 eukaryotic translation elongation factor 2 2 2
MIRT563102 PABPC4L poly(A) binding protein cytoplasmic 4 like 2 2
MIRT563212 ZNF813 zinc finger protein 813 2 2
MIRT563426 KIF3A kinesin family member 3A 2 2
MIRT563473 SPIN4 spindlin family member 4 2 2
MIRT564015 HSPA4 heat shock protein family A (Hsp70) member 4 2 4
MIRT564117 ZYG11B zyg-11 family member B, cell cycle regulator 2 2
MIRT564223 SDE2 SDE2 telomere maintenance homolog 2 2
MIRT564503 CACNG1 calcium voltage-gated channel auxiliary subunit gamma 1 2 2
MIRT564515 DUSP3 dual specificity phosphatase 3 2 2
MIRT564811 ZBTB21 zinc finger and BTB domain containing 21 2 2
MIRT565265 TPD52 tumor protein D52 2 2
MIRT566012 RHOB ras homolog family member B 2 2
MIRT566216 PTMA prothymosin, alpha 2 2
MIRT566638 NFYA nuclear transcription factor Y subunit alpha 2 2
MIRT566821 MAPK8 mitogen-activated protein kinase 8 2 2
MIRT566948 LEPROT leptin receptor overlapping transcript 2 2
MIRT567290 HNRNPAB heterogeneous nuclear ribonucleoprotein A/B 2 2
MIRT567895 CSTF2 cleavage stimulation factor subunit 2 2 2
MIRT568731 MTRNR2L3 MT-RNR2-like 3 2 2
MIRT571263 ZNF239 zinc finger protein 239 2 2
MIRT572593 EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 2 2
MIRT573827 TGOLN2 trans-golgi network protein 2 2 2
MIRT576391 Fhl2 four and a half LIM domains 2 2 2
MIRT609901 SMS spermine synthase 2 2
MIRT613710 ELMSAN1 ELM2 and Myb/SANT domain containing 1 2 2
MIRT614406 ADAT1 adenosine deaminase, tRNA specific 1 2 2
MIRT615042 DCX doublecortin 2 2
MIRT617514 C5orf45 MRN complex interacting protein 2 2
MIRT619476 PRDM10 PR/SET domain 10 2 2
MIRT620349 TLN1 talin 1 2 2
MIRT620910 PLA2G7 phospholipase A2 group VII 2 2
MIRT622131 SP4 Sp4 transcription factor 2 2
MIRT622955 OTUD7B OTU deubiquitinase 7B 2 2
MIRT623351 MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 2 2
MIRT623619 INTU inturned planar cell polarity protein 2 2
MIRT624409 CCDC171 coiled-coil domain containing 171 2 2
MIRT625171 CCS copper chaperone for superoxide dismutase 2 2
MIRT625685 RPP40 ribonuclease P/MRP subunit p40 2 2
MIRT625875 ALDH18A1 aldehyde dehydrogenase 18 family member A1 2 2
MIRT626002 FAM107A family with sequence similarity 107 member A 2 2
MIRT626872 HRH4 histamine receptor H4 2 4
MIRT628220 FKBP9 FK506 binding protein 9 2 2
MIRT628265 DIO2 iodothyronine deiodinase 2 2 2
MIRT628402 C8orf37 chromosome 8 open reading frame 37 2 2
MIRT630564 C3orf36 chromosome 3 open reading frame 36 2 4
MIRT631577 RASSF9 Ras association domain family member 9 2 2
MIRT635730 CCDC58 coiled-coil domain containing 58 2 2
MIRT636224 SLC8A1 solute carrier family 8 member A1 2 2
MIRT636613 CLIC5 chloride intracellular channel 5 2 2
MIRT638899 CDK9 cyclin dependent kinase 9 2 2
MIRT640167 ATXN7L1 ataxin 7 like 1 2 2
MIRT642070 GTDC1 glycosyltransferase like domain containing 1 2 2
MIRT643034 CHCHD7 coiled-coil-helix-coiled-coil-helix domain containing 7 2 2
MIRT644572 SPOP speckle type BTB/POZ protein 2 2
MIRT644954 IFNB1 interferon beta 1 2 2
MIRT645948 TTF2 transcription termination factor 2 2 2
MIRT646440 XRCC2 X-ray repair cross complementing 2 2 2
MIRT647896 EPN2 epsin 2 2 2
MIRT648276 ZNF582 zinc finger protein 582 2 2
MIRT649381 NEDD1 neural precursor cell expressed, developmentally down-regulated 1 2 2
MIRT650254 CD68 CD68 molecule 2 2
MIRT650333 ATP5S ATP synthase, H+ transporting, mitochondrial Fo complex subunit s (factor B) 2 2
MIRT651707 VMP1 vacuole membrane protein 1 2 2
MIRT651774 VASP vasodilator stimulated phosphoprotein 2 2
MIRT653144 SRPK2 SRSF protein kinase 2 2 2
MIRT654112 RPS6KA5 ribosomal protein S6 kinase A5 2 2
MIRT654161 RORB RAR related orphan receptor B 2 2
MIRT655716 MLF2 myeloid leukemia factor 2 2 2
MIRT657476 HDAC4 histone deacetylase 4 2 2
MIRT658095 FOXO1 forkhead box O1 2 2
MIRT658860 DTX3L deltex E3 ubiquitin ligase 3L 2 2
MIRT658988 DNAJA1 DnaJ heat shock protein family (Hsp40) member A1 2 2
MIRT660767 ALDH6A1 aldehyde dehydrogenase 6 family member A1 2 2
MIRT661622 C2orf15 chromosome 2 open reading frame 15 2 2
MIRT661694 TFDP2 transcription factor Dp-2 2 2
MIRT662208 PLA2G4E phospholipase A2 group IVE 2 2
MIRT662443 RALGAPA1 Ral GTPase activating protein catalytic alpha subunit 1 2 2
MIRT664422 ADH5 alcohol dehydrogenase 5 (class III), chi polypeptide 2 2
MIRT687505 NECAB1 N-terminal EF-hand calcium binding protein 1 2 2
MIRT689910 SOD2 superoxide dismutase 2 2 2
MIRT690781 PLA2G2C phospholipase A2 group IIC 2 2
MIRT698488 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT699685 SFMBT2 Scm like with four mbt domains 2 2 2
MIRT700926 PDS5A PDS5 cohesin associated factor A 2 2
MIRT702258 LMNB1 lamin B1 2 2
MIRT703166 GPR137C G protein-coupled receptor 137C 2 2
MIRT703242 GNS glucosamine (N-acetyl)-6-sulfatase 2 2
MIRT704737 CENPQ centromere protein Q 2 2
MIRT707310 GLRX2 glutaredoxin 2 2 2
MIRT710021 KCNQ5 potassium voltage-gated channel subfamily Q member 5 2 2
MIRT712212 SCOC short coiled-coil protein 2 2
MIRT714742 SETBP1 SET binding protein 1 2 2
MIRT718268 ZNF749 zinc finger protein 749 2 2
MIRT720553 DYRK4 dual specificity tyrosine phosphorylation regulated kinase 4 2 2
MIRT722248 RBM41 RNA binding motif protein 41 2 2
MIRT723767 MPLKIP M-phase specific PLK1 interacting protein 2 2
MIRT723977 KIAA0146 scaffolding protein involved in DNA repair 1 1
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-4 Dexamethasone approved 5743 Microarray primary rat thymocytes 20847043 2010 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4282 Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-4282 Neoadjuvant chemotherapy sensitive tissue (breast cancer)
hsa-miR-4282 Neoadjuvant chemotherapy sensitive tissue (breast cancer)

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