pre-miRNA Information
pre-miRNA hsa-mir-2355   
Genomic Coordinates chr2: 207109987 - 207110073
Description Homo sapiens miR-2355 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-2355-5p
Sequence 11| AUCCCCAGAUACAAUGGACAA |31
Evidence Experimental
Experiments SOLiD
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 1 2 - 207110063 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1268296297 4 dbSNP
rs1361046879 5 dbSNP
rs1219551997 6 dbSNP
rs1295756820 12 dbSNP
rs1345273529 15 dbSNP
rs977145706 15 dbSNP
rs1209629984 20 dbSNP
rs759940260 21 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol SUCLG2   
Synonyms G-SCS, GBETA, GTPSCS
Description succinate-CoA ligase GDP-forming beta subunit
Transcript NM_003848   
Other Transcripts NM_001177599   
Expression
Putative miRNA Targets on SUCLG2
3'UTR of SUCLG2
(miRNA target sites are highlighted)
>SUCLG2|NM_003848|3'UTR
   1 TGTCTTTGTCCTGATCCAATGGAGAAAGAAAGCCATTTTTCCGTAAAAAGGGATGGTTCATCATTGTGAAAGAAATGGTT
  81 ATCTCATTGGGGAAGAAAAGGGGAGGGGGAAGGCAAGAATCACTGAAAAATCTTAAATCTGTGTTTTCTGGAATAAGATA
 161 TCTAGACAGCCTAAATCTGATTTTGGTCTTTATAAAAATAATATCTTGTGTTCTCATACTTTTCTGTCACTGTAAGCCTG
 241 CCCAGTAGGCAGTGTTTTGCAGACTTTGGGGAGTGGTCTATGTGGCCAAATATTGTGTGTATAGACAGAATTTGAAATCA
 321 AGTCCTGCTTCATTTACAAGAATTTTGGTGGGCATCTAATCCTACATAATGAAAAAGAAAAACAGACCATTTAAAAACTC
 401 AGACAAGATTATATTTAATATATTAATTACTAAAAAGGCATAAGATTACACTGAACATATTAGCTACTAAAAAGGCACTG
 481 CTAAGACATTCAAGCAAATAGCTATTACACACTACTGCAGATTTTACAGGTTTCTAATTCTAACATATGTTTGAAAAATC
 561 CGTGAGTATTCCAAAATATATTTAATAATGGAATATCTGCATTAATATACCATCCATGTGTTTTTACCATTTGCCTTAAT
 641 ATTGAATATACTGTTTACCTCACACTAAAAAGAAAACCAGAAGCCTTATTTGTGATTTTGGGAGTGGAAGCTTCCATTTT
 721 TGTGTCAAAAATGAATCCTGATTCTTATGGAAATCTCTGTTATTAAGATATTTCAAGATGAGACAACACTGAAGATCAAA
 801 TTGTGTTTAGTATCACTATCTTCTCTCCTCGTTTCTCTCTTACTCCTCATCCTCCCAGAATCTACCAGTTTATGGTAGAA
 881 AGATGGGAACCTTATTTGAATGTGTTTTTTTTTTCCATGATGTCCAATTTTGTTGTGGGAAAGGATTTGGATAAAATTTT
 961 TGTTTAAATTTTGGTAGATTTTTATCTATACAAATTTAAATAAAATTATGTTTTGTAAGCTGTAAGAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' aaCAGGUAACAU---AGACCCCUa 5'
            || : ||| |   |:|||||| 
Target 5' caGTGTTTTGCAGACTTTGGGGAg 3'
250 - 273 139.00 -12.22
2
miRNA  3' aacaggUAACAUA--GACCCCUa 5'
                :|| | |  :|||||| 
Target 5' gaaatgGTTATCTCATTGGGGAa 3'
72 - 94 129.00 -10.70
3
miRNA  3' aaCAGGUAACAUAGAC-CCCUa 5'
            ||||| | |  :|| |||| 
Target 5' atGTCCAATTTTGTTGTGGGAa 3'
920 - 941 115.00 -15.20
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30454922 42 COSMIC
COSN31580112 93 COSMIC
COSN22324295 132 COSMIC
COSN19515383 180 COSMIC
COSN19515488 184 COSMIC
COSN5004074 831 COSMIC
COSN31608886 843 COSMIC
COSN31521762 867 COSMIC
COSN20098607 904 COSMIC
COSN25507202 1000 COSMIC
rs115560420 205 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs756190494 3 dbSNP
rs1321108619 5 dbSNP
rs1283910479 6 dbSNP
rs1239613382 8 dbSNP
rs780425956 8 dbSNP
rs750872073 13 dbSNP
rs768032609 19 dbSNP
rs1193638368 23 dbSNP
rs373402509 24 dbSNP
rs757576142 26 dbSNP
rs1479427517 29 dbSNP
rs922675077 32 dbSNP
rs763790906 35 dbSNP
rs762579776 40 dbSNP
rs1065399 43 dbSNP
rs1300341273 44 dbSNP
rs1443373251 45 dbSNP
rs945862279 46 dbSNP
rs759142864 49 dbSNP
rs771035567 50 dbSNP
rs773279313 51 dbSNP
rs1383805098 52 dbSNP
rs1465607622 67 dbSNP
rs181384277 87 dbSNP
rs913064811 100 dbSNP
rs1404700995 101 dbSNP
rs1284532118 102 dbSNP
rs1347934386 103 dbSNP
rs559363582 105 dbSNP
rs1237047816 106 dbSNP
rs1260149618 110 dbSNP
rs1351709440 115 dbSNP
rs1190236721 116 dbSNP
rs1471854377 126 dbSNP
rs1289831845 127 dbSNP
rs1489809144 131 dbSNP
rs151301956 132 dbSNP
rs371311656 141 dbSNP
rs1179055832 148 dbSNP
rs1362673990 153 dbSNP
rs1034257279 158 dbSNP
rs1159992548 160 dbSNP
rs767605356 161 dbSNP
rs979729936 163 dbSNP
rs1304117991 167 dbSNP
rs142431113 170 dbSNP
rs1023967893 174 dbSNP
rs1336480327 176 dbSNP
rs994328252 181 dbSNP
rs1196657739 184 dbSNP
rs1065400 185 dbSNP
rs3206427 188 dbSNP
rs190389253 190 dbSNP
rs1489443116 192 dbSNP
rs3206428 203 dbSNP
rs369113230 204 dbSNP
rs115560420 205 dbSNP
rs1437950684 210 dbSNP
rs576754600 218 dbSNP
rs372841027 222 dbSNP
rs1383061863 228 dbSNP
rs759390766 239 dbSNP
rs187248996 242 dbSNP
rs1370511887 245 dbSNP
rs1460766986 262 dbSNP
rs775662928 267 dbSNP
rs1298144605 272 dbSNP
rs1337882977 280 dbSNP
rs1334713571 282 dbSNP
rs1382312226 288 dbSNP
rs1246940058 301 dbSNP
rs901177914 302 dbSNP
rs1042462923 317 dbSNP
rs945466750 319 dbSNP
rs35581846 322 dbSNP
rs1339978309 324 dbSNP
rs181023393 327 dbSNP
rs915352024 333 dbSNP
rs1460613398 336 dbSNP
rs1395773672 342 dbSNP
rs147658116 348 dbSNP
rs1183870828 350 dbSNP
rs558295963 352 dbSNP
rs1054682266 356 dbSNP
rs1065401 357 dbSNP
rs1174405583 361 dbSNP
rs558658577 366 dbSNP
rs1453447990 367 dbSNP
rs1338994597 377 dbSNP
rs1360132844 383 dbSNP
rs927209590 389 dbSNP
rs979989768 391 dbSNP
rs1326960797 395 dbSNP
rs1413207959 396 dbSNP
rs1261151804 399 dbSNP
rs971000560 403 dbSNP
rs1203745466 404 dbSNP
rs1159339243 405 dbSNP
rs916924810 411 dbSNP
rs972488995 419 dbSNP
rs572337780 422 dbSNP
rs1479103460 427 dbSNP
rs562145357 432 dbSNP
rs9866040 440 dbSNP
rs4241438 441 dbSNP
rs1178311179 446 dbSNP
rs1343666512 447 dbSNP
rs954233559 449 dbSNP
rs1223719911 458 dbSNP
rs1449344015 462 dbSNP
rs556256806 462 dbSNP
rs1401582482 465 dbSNP
rs747570070 475 dbSNP
rs1344788068 477 dbSNP
rs998446721 479 dbSNP
rs1302673695 491 dbSNP
rs539607202 493 dbSNP
rs1214569019 501 dbSNP
rs1223981648 510 dbSNP
rs901146682 518 dbSNP
rs778488203 520 dbSNP
rs748860869 521 dbSNP
rs1042762411 523 dbSNP
rs11544844 546 dbSNP
rs1239803231 549 dbSNP
rs1009599043 558 dbSNP
rs1405838063 561 dbSNP
rs893873390 562 dbSNP
rs144757994 563 dbSNP
rs1295764815 566 dbSNP
rs879179896 570 dbSNP
rs1435002433 575 dbSNP
rs935792740 578 dbSNP
rs1349352991 580 dbSNP
rs1364887269 585 dbSNP
rs772544110 586 dbSNP
rs79866937 590 dbSNP
rs1294793206 592 dbSNP
rs796906455 594 dbSNP
rs1370606196 596 dbSNP
rs1222678594 597 dbSNP
rs927135960 607 dbSNP
rs1355395197 621 dbSNP
rs189379512 629 dbSNP
rs1291411041 653 dbSNP
rs1490665724 655 dbSNP
rs1227679148 657 dbSNP
rs184337240 663 dbSNP
rs1378634256 664 dbSNP
rs11544843 671 dbSNP
rs1158296345 676 dbSNP
rs1438808236 683 dbSNP
rs548139859 684 dbSNP
rs1395499793 685 dbSNP
rs191750658 690 dbSNP
rs972798974 701 dbSNP
rs961106725 710 dbSNP
rs1339807014 718 dbSNP
rs1245622334 735 dbSNP
rs1215800514 740 dbSNP
rs1384322217 741 dbSNP
rs1405713335 744 dbSNP
rs568931962 745 dbSNP
rs188521216 748 dbSNP
rs1352687203 752 dbSNP
rs1488992914 762 dbSNP
rs1440917242 763 dbSNP
rs909622221 767 dbSNP
rs532340448 768 dbSNP
rs1283384042 771 dbSNP
rs1449964158 772 dbSNP
rs1314821761 773 dbSNP
rs1357555769 776 dbSNP
rs983891474 779 dbSNP
rs184552784 798 dbSNP
rs1307367257 799 dbSNP
rs1240056707 800 dbSNP
rs566867532 808 dbSNP
rs1028509401 812 dbSNP
rs1303931692 813 dbSNP
rs1217970657 814 dbSNP
rs998415535 816 dbSNP
rs139549550 818 dbSNP
rs1021241397 819 dbSNP
rs1009979388 827 dbSNP
rs1358737032 830 dbSNP
rs893808392 831 dbSNP
rs1335750058 833 dbSNP
rs193050908 837 dbSNP
rs1361901677 843 dbSNP
rs1002256146 845 dbSNP
rs188834097 848 dbSNP
rs1044192643 850 dbSNP
rs949917842 857 dbSNP
rs576040533 858 dbSNP
rs879008664 860 dbSNP
rs895715837 871 dbSNP
rs769321429 873 dbSNP
rs1240102770 882 dbSNP
rs769341248 884 dbSNP
rs1194366425 886 dbSNP
rs1425650286 890 dbSNP
rs1467826176 895 dbSNP
rs562597001 896 dbSNP
rs1402475924 902 dbSNP
rs1415777786 905 dbSNP
rs398105974 905 dbSNP
rs939644372 905 dbSNP
rs1400957725 910 dbSNP
rs1280724963 911 dbSNP
rs1275447212 915 dbSNP
rs71109884 915 dbSNP
rs1344560028 916 dbSNP
rs1203565406 917 dbSNP
rs1260468673 917 dbSNP
rs1283801081 918 dbSNP
rs1487863735 919 dbSNP
rs1265263270 922 dbSNP
rs909559138 923 dbSNP
rs1192455865 924 dbSNP
rs1485829644 926 dbSNP
rs766202923 940 dbSNP
rs984249354 956 dbSNP
rs1208382006 965 dbSNP
rs545940580 966 dbSNP
rs1300378027 973 dbSNP
rs932409450 984 dbSNP
rs577357026 993 dbSNP
rs1404841365 998 dbSNP
rs1324308635 1004 dbSNP
rs1274273884 1008 dbSNP
rs1332958327 1022 dbSNP
rs1236935888 1024 dbSNP
rs1221044453 1025 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084065. RNA binding protein: AGO2. Condition:CLIP_emetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' aacagguaacauaGACCCCUa 5'
                       :|||||| 
Target 5' ------------aUUGGGGAa 3'
1 - 9
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084065
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_emetine_AbnovaAb
Location of target site ENST00000307227.5 | 3UTR | AUUGGGGAAGAAAAGGGGAGGGGGAAGGC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
KIRP -0.521 0 -0.495 0 32 Click to see details
UCEC 0.529 0.01 0.554 0.01 19 Click to see details
HNSC -0.318 0.02 -0.249 0.06 42 Click to see details
KICH -0.404 0.02 -0.371 0.03 25 Click to see details
CESC 0.987 0.05 1.000 0.5 3 Click to see details
PRAD -0.219 0.06 -0.061 0.34 50 Click to see details
LUSC -0.243 0.07 -0.195 0.12 38 Click to see details
LIHC -0.189 0.1 -0.207 0.08 49 Click to see details
THCA -0.164 0.11 -0.024 0.43 59 Click to see details
LUAD -0.36 0.13 -0.161 0.31 12 Click to see details
ESCA 0.341 0.15 0.218 0.26 11 Click to see details
KIRC -0.124 0.16 -0.066 0.3 68 Click to see details
CHOL 0.345 0.18 0.133 0.37 9 Click to see details
BLCA -0.18 0.24 -0.232 0.18 18 Click to see details
STAD 0.118 0.26 0.016 0.47 32 Click to see details
PCPG 0.634 0.28 0.500 0.33 3 Click to see details
PAAD 0.286 0.36 0.000 0.5 4 Click to see details
BRCA -0.029 0.4 -0.088 0.21 84 Click to see details
BRCA -0.029 0.4 -0.088 0.21 84 Click to see details
164 hsa-miR-2355-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT190653 PABPN1 poly(A) binding protein nuclear 1 2 2
MIRT286477 TAOK1 TAO kinase 1 2 4
MIRT318993 GIGYF1 GRB10 interacting GYF protein 1 2 2
MIRT345622 DCAF7 DDB1 and CUL4 associated factor 7 2 4
MIRT442513 SYT7 synaptotagmin 7 2 4
MIRT444247 CTNND1 catenin delta 1 2 2
MIRT444780 ECE1 endothelin converting enzyme 1 2 2
MIRT456525 TMEM63A transmembrane protein 63A 2 2
MIRT468960 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT469834 R3HDM4 R3H domain containing 4 2 2
MIRT470027 PTP4A1 protein tyrosine phosphatase type IVA, member 1 2 2
MIRT471167 PHB2 prohibitin 2 2 2
MIRT475819 HDGF heparin binding growth factor 2 4
MIRT479389 CDKN1B cyclin dependent kinase inhibitor 1B 2 6
MIRT481747 APH1A aph-1 homolog A, gamma-secretase subunit 2 2
MIRT485220 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT487259 CCNF cyclin F 2 2
MIRT489971 MCC mutated in colorectal cancers 2 4
MIRT491399 C1D C1D nuclear receptor corepressor 2 2
MIRT494959 CCDC144A coiled-coil domain containing 144A 2 4
MIRT494979 PPP5D1 PPP5 tetratricopeptide repeat domain containing 1 2 2
MIRT495225 CHST14 carbohydrate sulfotransferase 14 2 2
MIRT496550 TBX15 T-box 15 2 2
MIRT501612 PISD phosphatidylserine decarboxylase 2 2
MIRT509393 TRIM24 tripartite motif containing 24 2 2
MIRT519616 ZNF788 zinc finger family member 788 2 4
MIRT519738 ZNF394 zinc finger protein 394 2 4
MIRT521230 SAR1A secretion associated Ras related GTPase 1A 2 4
MIRT521801 POM121C POM121 transmembrane nucleoporin C 2 2
MIRT526233 C2orf15 chromosome 2 open reading frame 15 2 2
MIRT526932 CMSS1 cms1 ribosomal small subunit homolog (yeast) 2 2
MIRT529189 ACBD7 acyl-CoA binding domain containing 7 2 2
MIRT529329 ZNF649 zinc finger protein 649 2 2
MIRT529698 MRPL30 mitochondrial ribosomal protein L30 2 2
MIRT529921 TOP1MT DNA topoisomerase I mitochondrial 2 2
MIRT530032 SMC1A structural maintenance of chromosomes 1A 2 2
MIRT530898 C9orf3 chromosome 9 open reading frame 3 2 2
MIRT531621 TM4SF5 transmembrane 4 L six family member 5 2 4
MIRT533132 XIAP X-linked inhibitor of apoptosis 2 2
MIRT533210 WAPAL WAPL cohesin release factor 2 2
MIRT534058 ST6GALNAC3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 2 2
MIRT535487 PARVB parvin beta 2 2
MIRT536749 HOXD9 homeobox D9 2 2
MIRT551456 CARKD NAD(P)HX dehydratase 2 2
MIRT551858 ASB6 ankyrin repeat and SOCS box containing 6 2 2
MIRT552095 FAM8A1 family with sequence similarity 8 member A1 2 2
MIRT552332 ZNF704 zinc finger protein 704 2 2
MIRT552549 ZFP36L2 ZFP36 ring finger protein like 2 2 2
MIRT561505 SRSF2 serine and arginine rich splicing factor 2 2 2
MIRT562702 ZNF415 zinc finger protein 415 2 2
MIRT563052 ZNF138 zinc finger protein 138 2 2
MIRT564592 ZNF791 zinc finger protein 791 2 2
MIRT566422 PIGA phosphatidylinositol glycan anchor biosynthesis class A 2 2
MIRT570176 RCBTB1 RCC1 and BTB domain containing protein 1 2 2
MIRT570866 ZNF525 zinc finger protein 525 2 2
MIRT570875 ZFP1 ZFP1 zinc finger protein 2 2
MIRT571517 ZNF625 zinc finger protein 625 2 2
MIRT572551 DKK3 dickkopf WNT signaling pathway inhibitor 3 2 2
MIRT610894 HINFP histone H4 transcription factor 2 2
MIRT611037 PTGES prostaglandin E synthase 2 2
MIRT611479 HSPA4 heat shock protein family A (Hsp70) member 4 2 4
MIRT612419 SP1 Sp1 transcription factor 2 2
MIRT614478 FRMPD3 FERM and PDZ domain containing 3 2 2
MIRT616318 CACNA1A calcium voltage-gated channel subunit alpha1 A 2 2
MIRT616929 ZNF638 zinc finger protein 638 2 2
MIRT618131 GABARAPL3 GABA type A receptor associated protein like 3 pseudogene 2 2
MIRT618452 ZFP30 ZFP30 zinc finger protein 2 4
MIRT620671 BBS5 Bardet-Biedl syndrome 5 2 2
MIRT620713 ASB16 ankyrin repeat and SOCS box containing 16 2 2
MIRT621126 EMC7 ER membrane protein complex subunit 7 2 4
MIRT621443 TOMM22 translocase of outer mitochondrial membrane 22 2 2
MIRT623491 KCTD11 potassium channel tetramerization domain containing 11 2 2
MIRT623783 GOSR1 golgi SNAP receptor complex member 1 2 2
MIRT623918 FNBP1L formin binding protein 1 like 2 2
MIRT625723 CXorf38 chromosome X open reading frame 38 2 2
MIRT625778 GCNT1 glucosaminyl (N-acetyl) transferase 1, core 2 2 2
MIRT626940 TTR transthyretin 2 2
MIRT627357 TSC22D2 TSC22 domain family member 2 2 2
MIRT632078 ALDH1A2 aldehyde dehydrogenase 1 family member A2 2 2
MIRT633361 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT639793 MVK mevalonate kinase 2 2
MIRT643761 NAGK N-acetylglucosamine kinase 2 2
MIRT644358 NDUFAF6 NADH:ubiquinone oxidoreductase complex assembly factor 6 2 2
MIRT645558 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT646588 ANKRD36 ankyrin repeat domain 36 2 2
MIRT646631 SLC25A46 solute carrier family 25 member 46 2 2
MIRT648066 HSPA6 heat shock protein family A (Hsp70) member 6 2 2
MIRT648142 SUCLG2 succinate-CoA ligase GDP-forming beta subunit 2 2
MIRT648416 MYOZ3 myozenin 3 2 2
MIRT649218 AMMECR1L AMMECR1 like 2 2
MIRT649772 MRPS27 mitochondrial ribosomal protein S27 2 4
MIRT650510 UFM1 ubiquitin fold modifier 1 2 2
MIRT651007 ZNF740 zinc finger protein 740 2 2
MIRT651524 WNT2B Wnt family member 2B 2 2
MIRT652014 TTYH3 tweety family member 3 2 2
MIRT652513 TMEM109 transmembrane protein 109 2 2
MIRT652686 THUMPD3 THUMP domain containing 3 2 2
MIRT652772 TENM3 teneurin transmembrane protein 3 2 2
MIRT653160 SPRY4 sprouty RTK signaling antagonist 4 2 2
MIRT653765 SIX5 SIX homeobox 5 2 2
MIRT653792 SIRPA signal regulatory protein alpha 2 2
MIRT655649 OAZ2 ornithine decarboxylase antizyme 2 2 2
MIRT656263 MEX3A mex-3 RNA binding family member A 2 2
MIRT657044 KCNH6 potassium voltage-gated channel subfamily H member 6 2 2
MIRT657375 HMGA1 high mobility group AT-hook 1 2 2
MIRT657532 GTDC1 glycosyltransferase like domain containing 1 2 2
MIRT657542 GSTO2 glutathione S-transferase omega 2 2 2
MIRT657828 GJD3 gap junction protein delta 3 2 2
MIRT658946 DOK6 docking protein 6 2 2
MIRT660363 BACH2 BTB domain and CNC homolog 2 2 2
MIRT660406 ATXN7L3 ataxin 7 like 3 2 2
MIRT660948 ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 2 2
MIRT661031 AAK1 AP2 associated kinase 1 2 2
MIRT662435 RALGAPA1 Ral GTPase activating protein catalytic alpha subunit 1 2 2
MIRT668419 FAM217B family with sequence similarity 217 member B 2 2
MIRT669332 BSND barttin CLCNK type accessory beta subunit 2 2
MIRT676105 CLUAP1 clusterin associated protein 1 2 2
MIRT677084 SMIM15 small integral membrane protein 15 2 2
MIRT677127 OGFOD3 2-oxoglutarate and iron dependent oxygenase domain containing 3 2 2
MIRT678001 CPM carboxypeptidase M 2 2
MIRT678531 TMEM78 transmembrane protein 78 2 2
MIRT680000 ZNF860 zinc finger protein 860 2 2
MIRT680098 PXMP4 peroxisomal membrane protein 4 2 2
MIRT686795 SOX12 SRY-box 12 2 2
MIRT698887 SPTBN2 spectrin beta, non-erythrocytic 2 2 2
MIRT699371 SLC30A6 solute carrier family 30 member 6 2 2
MIRT702005 MIDN midnolin 2 2
MIRT708101 IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 2 2
MIRT709563 GYG2 glycogenin 2 2 2
MIRT710559 PPP2R5E protein phosphatase 2 regulatory subunit B'epsilon 2 2
MIRT710585 CDCA4 cell division cycle associated 4 2 2
MIRT710873 NT5DC1 5'-nucleotidase domain containing 1 2 2
MIRT711876 VASP vasodilator stimulated phosphoprotein 2 2
MIRT712226 RIMS3 regulating synaptic membrane exocytosis 3 2 2
MIRT713211 FAM13A family with sequence similarity 13 member A 2 2
MIRT713261 GPR55 G protein-coupled receptor 55 2 2
MIRT713327 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT713889 RNF19B ring finger protein 19B 2 2
MIRT714015 UBAP2L ubiquitin associated protein 2 like 2 2
MIRT714202 NLRP12 NLR family pyrin domain containing 12 2 2
MIRT714717 VPS8 VPS8, CORVET complex subunit 2 2
MIRT714748 ZNF385D zinc finger protein 385D 2 2
MIRT714806 ARHGEF19 Rho guanine nucleotide exchange factor 19 2 2
MIRT714852 ADAMTS17 ADAM metallopeptidase with thrombospondin type 1 motif 17 2 2
MIRT715717 MRPL4 mitochondrial ribosomal protein L4 2 2
MIRT715852 GRIN2A glutamate ionotropic receptor NMDA type subunit 2A 2 2
MIRT716853 MFSD12 major facilitator superfamily domain containing 12 2 2
MIRT717134 EBPL emopamil binding protein like 2 2
MIRT717248 TMEM246 transmembrane protein 246 2 2
MIRT717997 ZNF79 zinc finger protein 79 2 2
MIRT718341 PURA purine rich element binding protein A 2 2
MIRT719587 TFCP2L1 transcription factor CP2 like 1 2 2
MIRT720520 PTGR2 prostaglandin reductase 2 2 2
MIRT720671 SLC39A13 solute carrier family 39 member 13 2 2
MIRT721213 DCLK3 doublecortin like kinase 3 2 2
MIRT721757 INF2 inverted formin, FH2 and WH2 domain containing 2 2
MIRT721826 POU6F1 POU class 6 homeobox 1 2 2
MIRT722091 SUSD1 sushi domain containing 1 2 2
MIRT722275 LURAP1 leucine rich adaptor protein 1 2 2
MIRT722802 ARHGAP19 Rho GTPase activating protein 19 2 2
MIRT722866 FAM212B family with sequence similarity 212 member B 2 2
MIRT723113 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT724378 NEK8 NIMA related kinase 8 2 2
MIRT732775 PYCR1 pyrroline-5-carboxylate reductase 1 3 0
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-2355 Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-2355-5p Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-2355-5p Fluorouracil 3385 NSC19893 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-2355-5p Imatinib 5291 NSC743414 approved resistant High Chronic Myelogenous Leukemia cell line (K562)
hsa-miR-2355-5p Cisplatin 5460033 NSC119875 approved resistant High Non-Small Cell Lung Cancer cell line (A549, HCC827)
hsa-miR-2355-5p Gefitinib 123631 NSC715055 approved resistant High Non-Small Cell Lung Cancer cell line (A549, HCC827)
hsa-miR-2355-5p Temozolomide 5394 NSC362856 approved resistant High Glioma tissue
hsa-miR-2355-5p Osimertinib 71496458 NSC779217 approved sensitive cell line (HCC827)
hsa-miR-2355-5p Vemurafenib 42611257 NSC761431 approved resistant cell line (451Lu)
hsa-miR-2355-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-2355-5p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-2355-5p Tamoxifen+Fulvestrant sensitive cell line (LCC9)
hsa-miR-2355-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-2355-5p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-2355-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (TOV-112D)
hsa-miR-2355-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (OVSAHO)

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