pre-miRNA Information
pre-miRNA hsa-mir-3192   
Genomic Coordinates chr20: 18470615 - 18470691
Description Homo sapiens miR-3192 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3192-5p
Sequence 10| UCUGGGAGGUUGUAGCAGUGGAA |32
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs906254403 3 dbSNP
rs554130490 4 dbSNP
rs773140898 6 dbSNP
rs376614009 11 dbSNP
rs899297329 12 dbSNP
rs1330418015 18 dbSNP
rs1402597660 21 dbSNP
rs995052311 22 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ZNF689   
Synonyms TIPUH1
Description zinc finger protein 689
Transcript NM_138447   
Expression
Putative miRNA Targets on ZNF689
3'UTR of ZNF689
(miRNA target sites are highlighted)
>ZNF689|NM_138447|3'UTR
   1 AAGGGGAAGGACTGCCTACGTTCATTTCATTTTATGGAGGGTCCCAGAAAAGGGAAGGAGGAGCCCCAGGTCATACAGGG
  81 CAGAGTCAGAACTAAACCCGGGTCTCCTGCTGCACAGAGCTGAACTTTGTATCTTGCAATGCGCTGGCTGCCTCCCTGTG
 161 CGTGTCTGGAACAGTCCCATTAGGAGAGGTGACGTCATTTGCTTAAAGTTTTCCAAGCTACCCTATCCTAAAATAGTTTG
 241 TGTGGATATCAGGGCTAAAAGTTCTCCCCATCTATTTTAGGGGCTGTCTGCTTTTCTAGTCTGTCCACACAGGGATTACC
 321 TGTCATCTTGCATGCAATCAGGAGAATCTCATAGGGGCAGGACCTTCCCCTACTCTGCCTCTTCCTCCATACTAGGTTGG
 401 AAAAATCTGGTTTAGCCCACTTTTTGCAACACTCCTGCCAAGTGGTCTTCTACCCATTGCTTGAAAATCTCTCTTGACAG
 481 GGAGCTCACTACCTCACAAGGCAGGTCATTTCATTGTGGGATCTATAGAAGGTTAAGTACCACATTCTCCTCTAAACCTT
 561 GCCTACGACATGTTTAATACTTCATCTACATAGCAGCCCTTCAGATAATCACAACCACTTTGCCCCCAAGTTTTCAGGTT
 641 AAGTAGCATGAATTTGGTCATTCCTTAAAGACAGGGTTTCAATTTCCACACATGATCTCTGCAAACAGGCACTGGGTTTT
 721 CAGTGTCCTTTTTGAAGGGTCATATAAAAATAAGGTAACACCACAGTGCCACTACACCTTCTGGGGCTGGACTTGTTTCA
 801 GCAGCTTTGGTTGCACTGAATTTGGGGGAGCTGCATGGTACCAGGGGTTTATTGGGTTGCAGATATATAAATGCCCTAAA
 881 CTTAAAAAAAAAAAAAAAAGCTATAAAACTAAGTCTTCATCTTGTATTTGGAAAATTGGTTCAAGCTGGGTATGAGACAT
 961 AAGTGTAGTCAGCTCTGGGAGAAGGTTGCTCTTAAGGAGAAGCAGGGACCTGTGGTTTAGCAGCAGGAAGTGCAAATGGG
1041 ACTGGCTTGTGCTCTACCTGGCAGACCTGGATTGGCTTCAGGCAGCCAGTGCCTGGAAAAGCCTGGAGAATTGGGCCGTA
1121 CTTGACCCTGATTCTCATCAGGCACAGATGAATCACAGGCACCTAAGAATCGGCACAGAACTTCCATGAGGCCTCAGTCA
1201 GCATTTTTTCACAAAATGAGCTGAGGCCATTCAAGGAGGCTAGAAAGAGGGAACTGAATCCAGAGAGGAAGAGTCTATAG
1281 TCATCAAGTTGTATCCATGCCAGCCTCCCTCCACAGAGGTGGCAGCAGCGTGGCTCAATCTGATCCACCTCCATGGCACC
1361 CACTGGGTAGGTGCTTCATAAAGCTTTACCGAGTTAAATGTGAACAAGGCCTACCACTTTGCCTTGGGCAGCTGCACCAA
1441 ATTAGAATTTCCAGATGTGACTCATCTCATATTCCAACAGCTGGAGTGGGTCATCCTTTACCCCTGTGGCTCCTTCCTAC
1521 AGCTCTCCTGATCTCAGCACAAGCAGGGGAGCAGCTGGGGGAACACAGCTTTATGTAATTACCTCTGTTCAATATTTAGC
1601 AAGTTGCATTGTAACATTGTAACTGTTTGTTTCTCCTTGGATGATGAGCTACCCCCAAGAAGGGGTCATATCAGATTGGG
1681 TCTCATTAAAATGTCTGATGAATGAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' aaGGUGACGAUGUUGGAGGGucu 5'
            ||| |||  ||:||||||   
Target 5' atCCA-TGC--CAGCCTCCCtcc 3'
1293 - 1312 128.00 -21.42
2
miRNA  3' aagGUGACGAUGUUGGAGGGUCu 5'
             |:|||  :| :|||||| | 
Target 5' atgCGCTG--GCTGCCTCCCTGt 3'
139 - 159 128.00 -19.60
3
miRNA  3' aaGGUGACGAUGUU--GGAGGGucu 5'
            :||  |||| ||  :|||||   
Target 5' taTCAGGGCTAAAAGTTCTCCCcat 3'
247 - 271 123.00 -15.72
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30101350 27 COSMIC
COSN30538564 30 COSMIC
COSN21528418 129 COSMIC
COSN9645489 131 COSMIC
COSN31964900 151 COSMIC
COSN20078629 156 COSMIC
COSN20065723 162 COSMIC
COSN31606159 195 COSMIC
COSN30176369 300 COSMIC
COSN31533695 323 COSMIC
COSN31556349 368 COSMIC
COSN20078630 490 COSMIC
COSN1185258 690 COSMIC
COSN32061441 884 COSMIC
COSN23782931 959 COSMIC
COSN32062584 1477 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1370823081 2 dbSNP
rs1327174800 6 dbSNP
rs1443127230 7 dbSNP
rs542426608 11 dbSNP
rs749189576 16 dbSNP
rs1462678887 18 dbSNP
rs1375070033 19 dbSNP
rs773194504 20 dbSNP
rs370031295 33 dbSNP
rs769523291 35 dbSNP
rs117929446 40 dbSNP
rs1477045530 42 dbSNP
rs781440592 52 dbSNP
rs755177525 54 dbSNP
rs747305879 55 dbSNP
rs1465296423 61 dbSNP
rs1329781201 62 dbSNP
rs892834863 63 dbSNP
rs766968713 68 dbSNP
rs746674871 70 dbSNP
rs1231443536 73 dbSNP
rs1347633343 74 dbSNP
rs779968794 78 dbSNP
rs1237101247 81 dbSNP
rs1402883415 82 dbSNP
rs758620343 85 dbSNP
rs563600502 88 dbSNP
rs758859682 89 dbSNP
rs1392044604 94 dbSNP
rs1398841905 95 dbSNP
rs1301341236 96 dbSNP
rs1465328858 98 dbSNP
rs184155588 99 dbSNP
rs562023799 100 dbSNP
rs577606801 102 dbSNP
rs931754405 106 dbSNP
rs1443087649 107 dbSNP
rs148623506 108 dbSNP
rs754185087 109 dbSNP
rs767145699 111 dbSNP
rs773889115 114 dbSNP
rs759085105 115 dbSNP
rs1281464275 120 dbSNP
rs756488360 122 dbSNP
rs1213551979 126 dbSNP
rs753161599 127 dbSNP
rs191537720 128 dbSNP
rs1049823742 129 dbSNP
rs1040117157 133 dbSNP
rs996517709 137 dbSNP
rs774090803 139 dbSNP
rs765862960 141 dbSNP
rs541155716 142 dbSNP
rs773070167 143 dbSNP
rs769758646 145 dbSNP
rs1314482308 148 dbSNP
rs1417633636 150 dbSNP
rs1462762362 150 dbSNP
rs1384077699 152 dbSNP
rs1159097247 153 dbSNP
rs1470856564 154 dbSNP
rs907667222 155 dbSNP
rs1186285656 161 dbSNP
rs747889869 162 dbSNP
rs985148978 170 dbSNP
rs1388996635 177 dbSNP
rs573460470 185 dbSNP
rs776106891 186 dbSNP
rs1213395058 187 dbSNP
rs1303281490 188 dbSNP
rs916597255 190 dbSNP
rs1487525484 193 dbSNP
rs1284139941 194 dbSNP
rs776268453 196 dbSNP
rs1279630243 201 dbSNP
rs866294007 208 dbSNP
rs1353537630 212 dbSNP
rs765990251 213 dbSNP
rs960669975 213 dbSNP
rs555167372 225 dbSNP
rs768536598 226 dbSNP
rs747193883 228 dbSNP
rs1356259713 234 dbSNP
rs540002761 240 dbSNP
rs886911573 245 dbSNP
rs1295358164 246 dbSNP
rs1358437551 248 dbSNP
rs1397850754 253 dbSNP
rs1035081257 256 dbSNP
rs1048221965 257 dbSNP
rs930681229 267 dbSNP
rs780380095 270 dbSNP
rs147796088 272 dbSNP
rs750788932 274 dbSNP
rs1159804053 277 dbSNP
rs1011611968 280 dbSNP
rs1461522277 283 dbSNP
rs1419508893 284 dbSNP
rs1191104460 285 dbSNP
rs890033019 286 dbSNP
rs767977078 288 dbSNP
rs569526488 289 dbSNP
rs1415319005 294 dbSNP
rs991348084 297 dbSNP
rs1417258736 301 dbSNP
rs1050540503 305 dbSNP
rs1241872958 312 dbSNP
rs995868304 322 dbSNP
rs927976243 325 dbSNP
rs901473879 326 dbSNP
rs1265886077 328 dbSNP
rs1310379814 330 dbSNP
rs1341994204 333 dbSNP
rs757696423 335 dbSNP
rs1040146553 340 dbSNP
rs940417353 348 dbSNP
rs886307069 350 dbSNP
rs144315935 352 dbSNP
rs1351397847 357 dbSNP
rs1214624076 358 dbSNP
rs1262537394 360 dbSNP
rs538650455 361 dbSNP
rs916519440 363 dbSNP
rs79663100 364 dbSNP
rs989667361 368 dbSNP
rs1400338517 369 dbSNP
rs939364525 371 dbSNP
rs958481168 376 dbSNP
rs1184767580 384 dbSNP
rs1380289259 389 dbSNP
rs927930517 391 dbSNP
rs1438378775 395 dbSNP
rs1028058664 403 dbSNP
rs1345251078 415 dbSNP
rs1465257242 422 dbSNP
rs1165565170 432 dbSNP
rs1404099381 438 dbSNP
rs1453173542 441 dbSNP
rs752218525 445 dbSNP
rs978186647 447 dbSNP
rs997023672 452 dbSNP
rs1242198506 453 dbSNP
rs1309267179 454 dbSNP
rs186734767 457 dbSNP
rs1317549661 458 dbSNP
rs1232811672 476 dbSNP
rs764678375 487 dbSNP
rs1462816759 492 dbSNP
rs1243104718 505 dbSNP
rs1237923498 506 dbSNP
rs546759427 507 dbSNP
rs900812520 516 dbSNP
rs1179416420 525 dbSNP
rs1022916588 526 dbSNP
rs989647511 530 dbSNP
rs954333922 531 dbSNP
rs1004049948 533 dbSNP
rs1215429364 540 dbSNP
rs1351069599 541 dbSNP
rs759016266 542 dbSNP
rs1431056804 548 dbSNP
rs1246113388 558 dbSNP
rs998397790 566 dbSNP
rs572719767 567 dbSNP
rs1330484408 577 dbSNP
rs901546163 580 dbSNP
rs1018611840 582 dbSNP
rs1358061450 583 dbSNP
rs931155442 586 dbSNP
rs1383842112 596 dbSNP
rs528528416 597 dbSNP
rs1298609010 605 dbSNP
rs1004663829 606 dbSNP
rs776194842 608 dbSNP
rs886171069 610 dbSNP
rs927921964 624 dbSNP
rs1224337164 627 dbSNP
rs1049263583 648 dbSNP
rs982117467 657 dbSNP
rs1207253483 658 dbSNP
rs930506458 659 dbSNP
rs567441374 665 dbSNP
rs1488435947 673 dbSNP
rs1188988503 675 dbSNP
rs894939783 675 dbSNP
rs1288080229 682 dbSNP
rs1480572004 683 dbSNP
rs560189384 689 dbSNP
rs939269757 690 dbSNP
rs990167326 709 dbSNP
rs1349296357 737 dbSNP
rs548720278 756 dbSNP
rs1301427122 757 dbSNP
rs1028928144 759 dbSNP
rs530626602 761 dbSNP
rs1405819516 763 dbSNP
rs1384671043 764 dbSNP
rs978052415 767 dbSNP
rs1163370144 771 dbSNP
rs945488976 772 dbSNP
rs1216757922 781 dbSNP
rs915348731 782 dbSNP
rs975161418 787 dbSNP
rs989936517 790 dbSNP
rs35327755 791 dbSNP
rs1321693458 796 dbSNP
rs1219940402 812 dbSNP
rs1293355400 814 dbSNP
rs954238728 828 dbSNP
rs1192496190 829 dbSNP
rs183448674 836 dbSNP
rs1260666367 838 dbSNP
rs759331566 845 dbSNP
rs1476188243 856 dbSNP
rs191873843 873 dbSNP
rs1412773044 875 dbSNP
rs1487487849 877 dbSNP
rs1270643236 878 dbSNP
rs1165356035 879 dbSNP
rs1222738815 882 dbSNP
rs1490061275 883 dbSNP
rs1297650378 884 dbSNP
rs1425319748 884 dbSNP
rs397952366 884 dbSNP
rs374618512 888 dbSNP
rs1343691055 893 dbSNP
rs1028905301 897 dbSNP
rs75192338 898 dbSNP
rs78586314 899 dbSNP
rs1172886965 900 dbSNP
rs1244427937 900 dbSNP
rs1271158608 900 dbSNP
rs1433122973 900 dbSNP
rs1448421774 900 dbSNP
rs35786329 900 dbSNP
rs546766456 900 dbSNP
rs548307545 900 dbSNP
rs746988720 900 dbSNP
rs79906028 900 dbSNP
rs869032012 900 dbSNP
rs977033223 903 dbSNP
rs1236716768 905 dbSNP
rs1471652358 922 dbSNP
rs965606379 922 dbSNP
rs74015017 946 dbSNP
rs1308022177 950 dbSNP
rs886808412 959 dbSNP
rs1158172588 960 dbSNP
rs1026892328 962 dbSNP
rs1434202259 964 dbSNP
rs1004568935 973 dbSNP
rs886075214 984 dbSNP
rs1358960230 991 dbSNP
rs1285486425 1000 dbSNP
rs894287916 1013 dbSNP
rs1384238718 1024 dbSNP
rs1240028757 1025 dbSNP
rs139334502 1027 dbSNP
rs1365118880 1035 dbSNP
rs1002262192 1036 dbSNP
rs994957175 1038 dbSNP
rs1463545767 1040 dbSNP
rs1355655004 1041 dbSNP
rs1026296554 1049 dbSNP
rs541043389 1053 dbSNP
rs1170319111 1056 dbSNP
rs1205372634 1057 dbSNP
rs895019085 1065 dbSNP
rs1054877537 1067 dbSNP
rs1457276444 1076 dbSNP
rs1176654842 1091 dbSNP
rs151306294 1096 dbSNP
rs906444922 1099 dbSNP
rs1471167567 1101 dbSNP
rs773222914 1102 dbSNP
rs945344717 1106 dbSNP
rs1424806119 1113 dbSNP
rs1468404083 1117 dbSNP
rs1431882335 1118 dbSNP
rs1199786146 1121 dbSNP
rs913925838 1128 dbSNP
rs1446737971 1130 dbSNP
rs1327366257 1132 dbSNP
rs1054015288 1138 dbSNP
rs1442380204 1143 dbSNP
rs1273732433 1150 dbSNP
rs1321028961 1154 dbSNP
rs1224915509 1155 dbSNP
rs142439492 1162 dbSNP
rs1316997183 1171 dbSNP
rs62057170 1172 dbSNP
rs1480651006 1177 dbSNP
rs1252652411 1187 dbSNP
rs1438319783 1188 dbSNP
rs1182674525 1189 dbSNP
rs1250729307 1192 dbSNP
rs1246181977 1196 dbSNP
rs1196652642 1201 dbSNP
rs1201811416 1210 dbSNP
rs756268580 1210 dbSNP
rs1465382306 1214 dbSNP
rs764151956 1250 dbSNP
rs1399345604 1257 dbSNP
rs748046583 1258 dbSNP
rs774599898 1262 dbSNP
rs1222613643 1266 dbSNP
rs1343044763 1271 dbSNP
rs982525304 1276 dbSNP
rs1053913603 1277 dbSNP
rs575837330 1279 dbSNP
rs1330764154 1283 dbSNP
rs1283461735 1287 dbSNP
rs1339430134 1289 dbSNP
rs1225051659 1293 dbSNP
rs373748124 1302 dbSNP
rs1027085647 1308 dbSNP
rs560693597 1309 dbSNP
rs1209118207 1310 dbSNP
rs1291172654 1312 dbSNP
rs1489861159 1318 dbSNP
rs921469311 1322 dbSNP
rs571860480 1323 dbSNP
rs1269948071 1325 dbSNP
rs552918810 1329 dbSNP
rs1191540890 1330 dbSNP
rs965513888 1330 dbSNP
rs1476044092 1338 dbSNP
rs1163114294 1345 dbSNP
rs1034149625 1347 dbSNP
rs1002706857 1352 dbSNP
rs1426069486 1353 dbSNP
rs1303224061 1356 dbSNP
rs534698953 1358 dbSNP
rs1298161625 1359 dbSNP
rs1464518766 1368 dbSNP
rs982998233 1373 dbSNP
rs1046497930 1378 dbSNP
rs950416813 1390 dbSNP
rs892435595 1391 dbSNP
rs1224913809 1400 dbSNP
rs1292555089 1405 dbSNP
rs1485676144 1406 dbSNP
rs148792820 1414 dbSNP
rs1264300707 1417 dbSNP
rs1447880066 1420 dbSNP
rs574216891 1421 dbSNP
rs994631401 1429 dbSNP
rs921512507 1431 dbSNP
rs774194230 1438 dbSNP
rs117398185 1439 dbSNP
rs1033498166 1445 dbSNP
rs530614919 1449 dbSNP
rs944195779 1453 dbSNP
rs1419206120 1457 dbSNP
rs912755763 1464 dbSNP
rs1395302301 1471 dbSNP
rs982474304 1474 dbSNP
rs146161268 1477 dbSNP
rs1042285904 1485 dbSNP
rs1316341422 1486 dbSNP
rs1176160929 1487 dbSNP
rs188678203 1488 dbSNP
rs893839396 1493 dbSNP
rs1262772403 1506 dbSNP
rs749369204 1511 dbSNP
rs1351665790 1517 dbSNP
rs1203475014 1518 dbSNP
rs1263628750 1519 dbSNP
rs1202830368 1521 dbSNP
rs919568289 1526 dbSNP
rs932775203 1527 dbSNP
rs921367034 1529 dbSNP
rs1463069871 1533 dbSNP
rs1041122496 1535 dbSNP
rs780201876 1536 dbSNP
rs114741786 1550 dbSNP
rs1416733975 1555 dbSNP
rs958440313 1556 dbSNP
rs559390519 1560 dbSNP
rs547386466 1575 dbSNP
rs1468942881 1588 dbSNP
rs528910513 1592 dbSNP
rs1444585521 1594 dbSNP
rs1407972539 1601 dbSNP
rs1385654693 1608 dbSNP
rs1453288186 1609 dbSNP
rs953069805 1615 dbSNP
rs971194693 1616 dbSNP
rs920304270 1617 dbSNP
rs762808297 1633 dbSNP
rs1309196340 1635 dbSNP
rs1317796817 1636 dbSNP
rs1223081040 1649 dbSNP
rs1160000908 1650 dbSNP
rs183275054 1655 dbSNP
rs1009618991 1657 dbSNP
rs191811552 1674 dbSNP
rs1362798844 1678 dbSNP
rs1156328169 1679 dbSNP
rs1445878511 1684 dbSNP
rs142760817 1685 dbSNP
rs1243712544 1692 dbSNP
rs1182885062 1693 dbSNP
rs892547912 1697 dbSNP
rs1032466287 1698 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084065. RNA binding protein: AGO2. Condition:CLIP_emetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084065
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_emetine_AbnovaAb
Location of target site ENST00000287461.3 | 3UTR | AAAAGGGAAGGAGGAGCCCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
HNSC -0.999 0.01 -1.000 0.5 3 Click to see details
HNSC -0.999 0.01 -1.000 0.5 3 Click to see details
HNSC -0.999 0.01 -1.000 0.5 3 Click to see details
HNSC -0.999 0.01 -1.000 0.5 3 Click to see details
HNSC -0.999 0.01 -1.000 0.5 3 Click to see details
HNSC -0.999 0.01 -1.000 0.5 3 Click to see details
HNSC -0.999 0.01 -1.000 0.5 3 Click to see details
HNSC -0.999 0.01 -1.000 0.5 3 Click to see details
HNSC -0.999 0.01 -1.000 0.5 3 Click to see details
167 hsa-miR-3192-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT058548 CTTNBP2NL CTTNBP2 N-terminal like 2 2
MIRT139892 BTF3L4 basic transcription factor 3 like 4 2 6
MIRT207395 MAT2A methionine adenosyltransferase 2A 2 6
MIRT294640 ZNF548 zinc finger protein 548 2 2
MIRT324251 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT441475 BEST3 bestrophin 3 2 2
MIRT445233 SRGAP2 SLIT-ROBO Rho GTPase activating protein 2 2 2
MIRT446763 ZNF491 zinc finger protein 491 2 2
MIRT451003 EPS15L1 epidermal growth factor receptor pathway substrate 15 like 1 2 2
MIRT452436 QDPR quinoid dihydropteridine reductase 2 2
MIRT452582 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT452950 DISC1 disrupted in schizophrenia 1 2 2
MIRT453309 ZNF394 zinc finger protein 394 2 2
MIRT453810 KBTBD12 kelch repeat and BTB domain containing 12 2 2
MIRT454101 TMEM209 transmembrane protein 209 2 2
MIRT456228 LIX1L limb and CNS expressed 1 like 2 4
MIRT456738 TMEM239 transmembrane protein 239 2 2
MIRT456806 SIGLEC14 sialic acid binding Ig like lectin 14 2 4
MIRT457499 SLC35F6 solute carrier family 35 member F6 2 2
MIRT458037 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT459041 ZNF490 zinc finger protein 490 2 2
MIRT459135 FADS6 fatty acid desaturase 6 2 2
MIRT460126 CXCL16 C-X-C motif chemokine ligand 16 2 2
MIRT460506 FAM105A family with sequence similarity 105 member A 2 6
MIRT460944 NOA1 nitric oxide associated 1 2 4
MIRT461101 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT462641 PHF5A PHD finger protein 5A 2 2
MIRT463584 ZBTB38 zinc finger and BTB domain containing 38 2 2
MIRT466567 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 2
MIRT467090 SRRD SRR1 domain containing 2 2
MIRT471093 PIK3C2B phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta 2 2
MIRT472596 NACC1 nucleus accumbens associated 1 2 2
MIRT473084 MORN4 MORN repeat containing 4 2 2
MIRT475977 GTPBP2 GTP binding protein 2 2 2
MIRT477054 FAM210A family with sequence similarity 210 member A 2 2
MIRT478303 DDX19A DEAD-box helicase 19A 2 4
MIRT478489 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT478500 CYP1B1 cytochrome P450 family 1 subfamily B member 1 2 2
MIRT478858 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT479096 CNNM4 cyclin and CBS domain divalent metal cation transport mediator 4 2 2
MIRT479180 CLSPN claspin 2 2
MIRT479215 CLCC1 chloride channel CLIC like 1 2 2
MIRT481176 AVL9 AVL9 cell migration associated 2 6
MIRT483032 KHSRP KH-type splicing regulatory protein 2 4
MIRT485150 RASL10B RAS like family 10 member B 2 2
MIRT486104 SLC7A5 solute carrier family 7 member 5 2 4
MIRT486319 SIPA1 signal-induced proliferation-associated 1 2 2
MIRT489443 IFNLR1 interferon lambda receptor 1 2 2
MIRT489585 SSBP2 single stranded DNA binding protein 2 2 2
MIRT489702 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT490184 TMEM63C transmembrane protein 63C 2 2
MIRT491211 MLLT1 MLLT1, super elongation complex subunit 2 4
MIRT491276 DHX40 DEAH-box helicase 40 2 2
MIRT495162 CNGA2 cyclic nucleotide gated channel alpha 2 2 4
MIRT495222 DSCR3 DSCR3 arrestin fold containing 2 2
MIRT496820 CHRNB2 cholinergic receptor nicotinic beta 2 subunit 2 2
MIRT498602 KRT8 keratin 8 2 2
MIRT500003 HIST1H2BD histone cluster 1 H2B family member d 2 4
MIRT502065 KRAS KRAS proto-oncogene, GTPase 2 2
MIRT508197 SLC35E1 solute carrier family 35 member E1 2 2
MIRT508477 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT509635 RRP7A ribosomal RNA processing 7 homolog A 2 4
MIRT511039 NRF1 nuclear respiratory factor 1 2 2
MIRT516684 ZNF860 zinc finger protein 860 2 4
MIRT518394 ZNF250 zinc finger protein 250 2 2
MIRT518907 CDC14B cell division cycle 14B 2 2
MIRT520502 TRAM2 translocation associated membrane protein 2 2 6
MIRT521459 RAD51 RAD51 recombinase 2 2
MIRT522354 NCKIPSD NCK interacting protein with SH3 domain 2 4
MIRT522594 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1 like 2 2
MIRT523267 HIST1H2AE histone cluster 1 H2A family member e 2 2
MIRT523532 GLUL glutamate-ammonia ligase 2 4
MIRT524186 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT526842 PHC1 polyhomeotic homolog 1 2 2
MIRT528729 FAM26E calcium homeostasis modulator family member 5 2 2
MIRT540695 BMP3 bone morphogenetic protein 3 2 2
MIRT544483 TRIM4 tripartite motif containing 4 2 2
MIRT551566 LETM1 leucine zipper and EF-hand containing transmembrane protein 1 2 2
MIRT563619 ZNF277 zinc finger protein 277 2 2
MIRT564467 SLC35E2 solute carrier family 35 member E2 2 2
MIRT565031 VAV2 vav guanine nucleotide exchange factor 2 2 2
MIRT570294 ARPC3 actin related protein 2/3 complex subunit 3 2 2
MIRT572932 VDAC2 voltage dependent anion channel 2 2 2
MIRT573501 IQSEC3 IQ motif and Sec7 domain 3 2 2
MIRT573675 HES6 hes family bHLH transcription factor 6 2 2
MIRT609619 TRPC4AP transient receptor potential cation channel subfamily C member 4 associated protein 2 2
MIRT611966 PKD1 polycystin 1, transient receptor potential channel interacting 2 2
MIRT613930 HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 2 2
MIRT617733 ATCAY ATCAY, caytaxin 2 4
MIRT618878 MBL2 mannose binding lectin 2 2 2
MIRT627590 SHROOM3 shroom family member 3 2 2
MIRT628516 ZNF878 zinc finger protein 878 2 2
MIRT633964 GRWD1 glutamate rich WD repeat containing 1 2 2
MIRT634530 NEGR1 neuronal growth regulator 1 2 2
MIRT635455 APOLD1 apolipoprotein L domain containing 1 2 2
MIRT636412 MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 2 2
MIRT639672 PPEF2 protein phosphatase with EF-hand domain 2 2 6
MIRT642667 RGS6 regulator of G protein signaling 6 2 2
MIRT644080 A4GALT alpha 1,4-galactosyltransferase (P blood group) 2 2
MIRT647318 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT647942 RNF152 ring finger protein 152 2 2
MIRT648687 AP1M1 adaptor related protein complex 1 mu 1 subunit 2 2
MIRT648817 ZNF689 zinc finger protein 689 2 2
MIRT650347 TREM1 triggering receptor expressed on myeloid cells 1 2 2
MIRT650374 MOCS3 molybdenum cofactor synthesis 3 2 4
MIRT655935 NDUFA4P1 NDUFA4, mitochondrial complex associated pseudogene 1 2 2
MIRT663778 PEX26 peroxisomal biogenesis factor 26 2 2
MIRT664297 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT665842 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT668929 COL9A2 collagen type IX alpha 2 chain 2 2
MIRT669673 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT669907 KIAA0754 KIAA0754 2 4
MIRT670248 TRIM13 tripartite motif containing 13 2 2
MIRT670368 ULBP3 UL16 binding protein 3 2 4
MIRT670642 BVES blood vessel epicardial substance 2 2
MIRT670749 HOOK3 hook microtubule tethering protein 3 2 2
MIRT671184 ZNF891 zinc finger protein 891 2 2
MIRT673946 ZNF500 zinc finger protein 500 2 2
MIRT674682 PLCE1 phospholipase C epsilon 1 2 2
MIRT677912 HIST1H2BN histone cluster 1 H2B family member n 2 2
MIRT678876 FAM118A family with sequence similarity 118 member A 2 2
MIRT679528 RAB36 RAB36, member RAS oncogene family 2 2
MIRT680589 ZNF573 zinc finger protein 573 2 2
MIRT680650 KIAA1456 KIAA1456 2 2
MIRT681149 INTS7 integrator complex subunit 7 2 2
MIRT681177 IBA57 IBA57 homolog, iron-sulfur cluster assembly 2 2
MIRT681234 DUSP19 dual specificity phosphatase 19 2 2
MIRT681626 F2RL2 coagulation factor II thrombin receptor like 2 2 2
MIRT681643 SCRG1 stimulator of chondrogenesis 1 2 2
MIRT681926 KAT7 lysine acetyltransferase 7 2 2
MIRT682050 MRPS10 mitochondrial ribosomal protein S10 2 2
MIRT682156 SMS spermine synthase 2 2
MIRT683555 HAVCR1 hepatitis A virus cellular receptor 1 2 2
MIRT684304 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT684458 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT685986 CCDC77 coiled-coil domain containing 77 2 2
MIRT686782 AZF1 azoospermia factor 1 2 2
MIRT687329 OSMR oncostatin M receptor 2 2
MIRT687629 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT688792 CCNB1 cyclin B1 2 2
MIRT689756 PRR13 proline rich 13 2 2
MIRT690823 SGSM2 small G protein signaling modulator 2 2 2
MIRT691310 ZNF681 zinc finger protein 681 2 2
MIRT692676 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT693508 MOB3A MOB kinase activator 3A 2 2
MIRT694657 C14orf119 chromosome 14 open reading frame 119 2 2
MIRT694889 ZNF417 zinc finger protein 417 2 2
MIRT695740 ZNF117 zinc finger protein 117 2 2
MIRT697101 GPKOW G-patch domain and KOW motifs 2 2
MIRT698968 SPAST spastin 2 2
MIRT700379 RAB33B RAB33B, member RAS oncogene family 2 2
MIRT703930 EPG5 ectopic P-granules autophagy protein 5 homolog 2 2
MIRT706234 SYT15 synaptotagmin 15 2 2
MIRT706494 SEPT6 septin 6 2 2
MIRT710451 BTNL3 butyrophilin like 3 2 2
MIRT711684 ATF7IP activating transcription factor 7 interacting protein 2 2
MIRT711997 F9 coagulation factor IX 2 2
MIRT712727 NCAPG2 non-SMC condensin II complex subunit G2 2 2
MIRT713111 TMBIM4 transmembrane BAX inhibitor motif containing 4 2 2
MIRT713156 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 2
MIRT713440 AJAP1 adherens junctions associated protein 1 2 2
MIRT713830 NUP98 nucleoporin 98 2 2
MIRT714979 RAB21 RAB21, member RAS oncogene family 2 2
MIRT717411 ZCCHC24 zinc finger CCHC-type containing 24 2 2
MIRT718433 ZNF85 zinc finger protein 85 2 2
MIRT720575 SDHAF2 succinate dehydrogenase complex assembly factor 2 2 2
MIRT725098 TMEM120B transmembrane protein 120B 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-3192 5-Fluorouracil approved 3385 Microarray CNE cells 22614822 2012 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-3192 Dabrafenib 44462760 NSC764134 approved resistant cell line (A375)
hsa-mir-3192 Cisplatin 5460033 NSC119875 approved sensitive cell line (BxPC3)
hsa-miR-3192-5p Temozolomide 5394 NSC362856 approved sensitive cell line (U251)
hsa-miR-3192-5p Gefitinib 123631 NSC715055 approved resistant cell line (PC9)
hsa-miR-3192-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-3192-5p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-3192-5p Platinum 23939 resistant tissue
hsa-miR-3192-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3192-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-miR-3192-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)

Error report submission