pre-miRNA Information
pre-miRNA hsa-mir-4680   
Genomic Coordinates chr10: 110898090 - 110898155
Description Homo sapiens miR-4680 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4680-5p
Sequence 5| AGAACUCUUGCAGUCUUAGAUGU |27
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1274530692 2 dbSNP
rs780271274 5 dbSNP
rs1461423681 7 dbSNP
rs749729920 8 dbSNP
rs1252920446 10 dbSNP
rs201739274 11 dbSNP
rs774971106 19 dbSNP
rs748132091 22 dbSNP
rs773643180 22 dbSNP
rs1235425484 23 dbSNP
Putative Targets

Gene Information
Gene Symbol TERF2   
Synonyms TRBF2, TRF2
Description telomeric repeat binding factor 2
Transcript NM_005652   
Expression
Putative miRNA Targets on TERF2
3'UTR of TERF2
(miRNA target sites are highlighted)
>TERF2|NM_005652|3'UTR
   1 AACAGGCTTTCATTTCCACAGAATTCACAGGAGCATGGTTCCTAATAATAGCCCCTGATAGTCTGCTCTTTCTTTCTTTT
  81 TCTTTTTTTTTTTTTTTTGAGACAGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCG
 161 ACCTCCGTCTCCCGGGCTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCATCACGCC
 241 CGGCTAATGTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGAT
 321 CCACCCAACTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTGGCATCTGCTGTTTCTTTCAGAAGC
 401 TGGGCTGGGATGAGAATTTTGGGCAACCTCCTTCGACGTGGGGGAGGTCCCATTTCCACTTCATCACTGTTGGAGATCAT
 481 GGAGCTAAGAAGCAGAGCCAAGTCCACCCATGTCCTTGGCAGAGATGACAGGCACACAGCTTGTGCAGTGCCAGAATATC
 561 ATTAGCGTTTCCCTTCTTTAGTGGTTTGCTTAAATTTAAATCCCTGGTAATCTGTAGAACCTTCTCCTAGGAAATGGTGA
 641 AGTCTATTAGGAGCCACTTGTGACTCCATGACCTGTTAAAACCAGCAATGTGAGTATTATTTGGAGTAAATTTGTTCCAC
 721 GTCAAGTTCTGGCCTTCTGATGCAAATGCAAAGGAACTTAGTCTGTTATGAACCCAGGTTGATGACAGACCAGTCCTTGT
 801 GGAATAAGATTCCCTTTAAAAACTCTTTAGCCAGTCGTGACATCAACCCTAGACCTGTCTGCCTTGGCATTTGCTGTCAA
 881 CATCTGCTGGGCTATGTAGGCAGGTTAATCCTCCACTTCTCATGTGGTTGAACCAGTGTGTTTTTTGGTAAAATGGTGAT
 961 TGTAGATAAGATTAGTTCCCTGATCCCCTGCCCCCTGTCCCCTGCCTCTTTTCCCAATTCCCTTCCTTATGCTGGACTTT
1041 TAAAGCTTAAAAAAAATCCGATTGAATATAAATGCCTAATTTCATTCTTTGTGAAATGGTTGCTTCCTCCTGATTCCCTA
1121 ATTGTGCTGTGTTCGTGTCTTGCACTGGAATTCAACATTCCCTTCTCCTTTTGTACTGTGTTGTGCTTGCTGTCTCTCCC
1201 GGACACCCTTAAAGACTGTCTTTTTAGCAAAAAATTTCAGTAAAGTGTTTTCTGTAATCTTTTTTTAAAAGGTGAGAACT
1281 AATTATTGTCCATACTTGTAGCATTCTTCATTAAAGTCTTGCTTCTCTCAACTGTAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' uguAGAUUCUGACGUUCUCA-AGa 5'
             |:|:||||    ||||| || 
Target 5' tttTTTGAGAC----AGAGTCTCg 3'
93 - 112 126.00 -10.70
2
miRNA  3' uguAGAUUCUGACGUUCUCAAGa 5'
             |: |  ||||: :||| || 
Target 5' cacTTCATCACTGTTGGAGATCa 3'
457 - 479 112.00 -10.90
3
miRNA  3' uguaGAUUCUG-ACGUUCUCAAGa 5'
              ||  ||| || ::||| || 
Target 5' cctcCTTCGACGTGGGGGAGGTCc 3'
427 - 450 111.00 -12.10
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31524326 29 COSMIC
COSN30155805 57 COSMIC
COSN30160983 57 COSMIC
COSN30106910 65 COSMIC
COSN15667015 76 COSMIC
COSN15665229 82 COSMIC
COSN32051536 82 COSMIC
COSN32062197 82 COSMIC
COSN30498536 86 COSMIC
COSN30497363 88 COSMIC
COSN30501234 88 COSMIC
COSN8236593 111 COSMIC
COSN30497761 126 COSMIC
COSN30148734 144 COSMIC
COSN7269307 161 COSMIC
COSN1707082 344 COSMIC
COSN30710223 556 COSMIC
COSN9441040 613 COSMIC
COSN6092752 640 COSMIC
COSN31592792 1151 COSMIC
COSN17615353 1265 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1463125349 2 dbSNP
rs1220883246 4 dbSNP
rs778322986 6 dbSNP
rs758952546 11 dbSNP
rs139263619 15 dbSNP
rs544336951 21 dbSNP
rs961480579 28 dbSNP
rs778529288 31 dbSNP
rs754547331 34 dbSNP
rs753345856 35 dbSNP
rs1333795838 36 dbSNP
rs1355905342 37 dbSNP
rs766049920 38 dbSNP
rs894057314 43 dbSNP
rs1310569206 45 dbSNP
rs1054480785 54 dbSNP
rs543521301 55 dbSNP
rs1251969114 59 dbSNP
rs576081565 63 dbSNP
rs1016728059 69 dbSNP
rs1407711097 76 dbSNP
rs1260019158 77 dbSNP
rs1336977319 80 dbSNP
rs1187853373 82 dbSNP
rs879216080 82 dbSNP
rs935333903 82 dbSNP
rs371646194 83 dbSNP
rs1423070235 87 dbSNP
rs1170489109 88 dbSNP
rs1372027567 88 dbSNP
rs564161795 89 dbSNP
rs1175171331 97 dbSNP
rs1047682075 99 dbSNP
rs1198785534 99 dbSNP
rs1375833547 99 dbSNP
rs372147187 99 dbSNP
rs1226413837 100 dbSNP
rs1364609194 100 dbSNP
rs1282812845 101 dbSNP
rs374654423 106 dbSNP
rs547885370 108 dbSNP
rs1429511887 111 dbSNP
rs376263987 115 dbSNP
rs1487111090 119 dbSNP
rs1187671894 129 dbSNP
rs1185334476 141 dbSNP
rs9922727 142 dbSNP
rs959275435 143 dbSNP
rs1243893101 145 dbSNP
rs536136303 149 dbSNP
rs917053172 150 dbSNP
rs1288254610 157 dbSNP
rs12708898 159 dbSNP
rs1433060185 166 dbSNP
rs1206298251 171 dbSNP
rs906226048 173 dbSNP
rs1021093830 174 dbSNP
rs1212805456 177 dbSNP
rs556744799 181 dbSNP
rs984470533 183 dbSNP
rs893925592 185 dbSNP
rs747376532 188 dbSNP
rs1315068456 190 dbSNP
rs943548873 197 dbSNP
rs951060707 198 dbSNP
rs889355126 201 dbSNP
rs1214942259 203 dbSNP
rs1052048581 205 dbSNP
rs1025281547 206 dbSNP
rs1477462048 209 dbSNP
rs1403391414 211 dbSNP
rs1299545069 214 dbSNP
rs976439612 217 dbSNP
rs56106543 220 dbSNP
rs1409586582 221 dbSNP
rs1354354625 225 dbSNP
rs919284119 226 dbSNP
rs181931959 229 dbSNP
rs1435992714 230 dbSNP
rs552288604 232 dbSNP
rs1386420171 233 dbSNP
rs1375967129 234 dbSNP
rs942136102 237 dbSNP
rs527786405 238 dbSNP
rs983916962 241 dbSNP
rs145098731 242 dbSNP
rs772161964 248 dbSNP
rs1234307842 260 dbSNP
rs982063737 270 dbSNP
rs970775062 271 dbSNP
rs1202199255 279 dbSNP
rs1476135568 281 dbSNP
rs1020619844 282 dbSNP
rs1292447525 287 dbSNP
rs1244536920 288 dbSNP
rs1380000045 293 dbSNP
rs1356431289 294 dbSNP
rs1443244916 297 dbSNP
rs1307756575 301 dbSNP
rs1009695137 302 dbSNP
rs1046439387 303 dbSNP
rs1294510105 307 dbSNP
rs1355017905 309 dbSNP
rs1226057841 313 dbSNP
rs189353887 315 dbSNP
rs1373031796 316 dbSNP
rs184491047 318 dbSNP
rs1426985000 325 dbSNP
rs1366685434 327 dbSNP
rs1163568328 328 dbSNP
rs768045429 329 dbSNP
rs1471772857 330 dbSNP
rs1180154151 331 dbSNP
rs1430618231 332 dbSNP
rs1055248093 335 dbSNP
rs745774294 336 dbSNP
rs2650505 337 dbSNP
rs1369091095 340 dbSNP
rs562347121 344 dbSNP
rs1160089760 353 dbSNP
rs1418666359 355 dbSNP
rs1248689704 358 dbSNP
rs937175494 360 dbSNP
rs192646573 369 dbSNP
rs889303070 370 dbSNP
rs1272115254 371 dbSNP
rs1269483035 372 dbSNP
rs12934847 375 dbSNP
rs758811541 377 dbSNP
rs532160283 378 dbSNP
rs929892564 380 dbSNP
rs1217925026 384 dbSNP
rs918214532 387 dbSNP
rs897787697 388 dbSNP
rs1315922121 390 dbSNP
rs1304450235 404 dbSNP
rs976387400 412 dbSNP
rs1388485555 414 dbSNP
rs1455747055 416 dbSNP
rs1036357886 419 dbSNP
rs1173479881 427 dbSNP
rs1407127630 430 dbSNP
rs748641983 434 dbSNP
rs1320932837 435 dbSNP
rs564268621 437 dbSNP
rs1303074637 438 dbSNP
rs1294774320 440 dbSNP
rs1372675280 442 dbSNP
rs1017966719 443 dbSNP
rs1387796445 452 dbSNP
rs1274004193 457 dbSNP
rs1342659646 458 dbSNP
rs1289452961 462 dbSNP
rs1206818302 476 dbSNP
rs1284941727 484 dbSNP
rs1453182981 501 dbSNP
rs1208109388 502 dbSNP
rs985638071 504 dbSNP
rs958210074 507 dbSNP
rs1469950035 510 dbSNP
rs1032937836 515 dbSNP
rs529413896 534 dbSNP
rs372227222 535 dbSNP
rs1178912877 536 dbSNP
rs967366721 540 dbSNP
rs560455013 544 dbSNP
rs1429816010 546 dbSNP
rs1055834504 550 dbSNP
rs1413256615 552 dbSNP
rs1198580178 553 dbSNP
rs1458423152 567 dbSNP
rs1025269361 571 dbSNP
rs1317900130 579 dbSNP
rs1396099208 585 dbSNP
rs142995123 586 dbSNP
rs1386957729 599 dbSNP
rs189785281 602 dbSNP
rs1329124156 605 dbSNP
rs1240849476 606 dbSNP
rs556808259 607 dbSNP
rs1288750191 612 dbSNP
rs1328336236 620 dbSNP
rs779320128 621 dbSNP
rs1266289934 623 dbSNP
rs1337133241 624 dbSNP
rs1055193216 631 dbSNP
rs1425922767 638 dbSNP
rs1176742232 641 dbSNP
rs760285236 646 dbSNP
rs970676481 649 dbSNP
rs1240222336 651 dbSNP
rs1253017728 654 dbSNP
rs758547551 654 dbSNP
rs544856737 655 dbSNP
rs577494048 657 dbSNP
rs913839850 658 dbSNP
rs1419382879 661 dbSNP
rs888255717 661 dbSNP
rs987820322 662 dbSNP
rs1162142457 664 dbSNP
rs750206002 667 dbSNP
rs1212140929 668 dbSNP
rs957722934 669 dbSNP
rs1305644551 670 dbSNP
rs755554663 672 dbSNP
rs1378511694 675 dbSNP
rs1323088958 687 dbSNP
rs1295118865 688 dbSNP
rs1309447150 700 dbSNP
rs780001516 703 dbSNP
rs1405806520 706 dbSNP
rs1245531373 711 dbSNP
rs1007335693 717 dbSNP
rs1468010263 719 dbSNP
rs1360205352 720 dbSNP
rs953488170 721 dbSNP
rs767318770 725 dbSNP
rs1040969030 729 dbSNP
rs761696093 732 dbSNP
rs1030508588 734 dbSNP
rs1179476693 735 dbSNP
rs1444308882 736 dbSNP
rs1253776776 739 dbSNP
rs1275761634 761 dbSNP
rs1381695599 768 dbSNP
rs368311936 779 dbSNP
rs898075200 780 dbSNP
rs1424907148 791 dbSNP
rs910906885 796 dbSNP
rs985199356 800 dbSNP
rs1463177165 804 dbSNP
rs1037045250 812 dbSNP
rs749948840 824 dbSNP
rs138458716 828 dbSNP
rs1055782115 836 dbSNP
rs966902172 837 dbSNP
rs114396464 856 dbSNP
rs751280171 880 dbSNP
rs1338821126 881 dbSNP
rs1046220258 886 dbSNP
rs959335263 893 dbSNP
rs1298682370 894 dbSNP
rs868507668 898 dbSNP
rs1034108047 924 dbSNP
rs1341736262 924 dbSNP
rs1245730132 928 dbSNP
rs1006267379 935 dbSNP
rs949280497 962 dbSNP
rs1200435329 966 dbSNP
rs763996190 970 dbSNP
rs566354206 982 dbSNP
rs762675718 991 dbSNP
rs1389101563 995 dbSNP
rs1447318242 998 dbSNP
rs77546524 1017 dbSNP
rs936300761 1021 dbSNP
rs1465459913 1022 dbSNP
rs994396673 1034 dbSNP
rs1199041125 1042 dbSNP
rs765086954 1048 dbSNP
rs1437291041 1049 dbSNP
rs1040916689 1056 dbSNP
rs1226493093 1057 dbSNP
rs1364673812 1057 dbSNP
rs943971658 1058 dbSNP
rs139966848 1060 dbSNP
rs910854592 1060 dbSNP
rs184852492 1063 dbSNP
rs953101809 1066 dbSNP
rs568778108 1070 dbSNP
rs1246904032 1074 dbSNP
rs1463255633 1082 dbSNP
rs1192611811 1084 dbSNP
rs1030535951 1087 dbSNP
rs1317175101 1088 dbSNP
rs976259952 1089 dbSNP
rs1453476986 1109 dbSNP
rs962551071 1116 dbSNP
rs1015147111 1118 dbSNP
rs776920079 1120 dbSNP
rs1433128262 1121 dbSNP
rs1295575709 1122 dbSNP
rs887739372 1124 dbSNP
rs1034319349 1127 dbSNP
rs1368593163 1134 dbSNP
rs1001523166 1135 dbSNP
rs907280503 1138 dbSNP
rs11539287 1139 dbSNP
rs1229604544 1144 dbSNP
rs1266908807 1146 dbSNP
rs1326552859 1148 dbSNP
rs1046256607 1155 dbSNP
rs1223301533 1162 dbSNP
rs918105731 1170 dbSNP
rs1487955427 1171 dbSNP
rs1189201999 1172 dbSNP
rs1253728605 1179 dbSNP
rs75978837 1183 dbSNP
rs1300070951 1192 dbSNP
rs372622645 1196 dbSNP
rs1052312926 1200 dbSNP
rs548526982 1201 dbSNP
rs878894967 1205 dbSNP
rs749021204 1206 dbSNP
rs551820624 1208 dbSNP
rs1026798958 1213 dbSNP
rs532220753 1218 dbSNP
rs571099215 1220 dbSNP
rs761029222 1221 dbSNP
rs1410973263 1234 dbSNP
rs931660178 1235 dbSNP
rs1349187181 1247 dbSNP
rs1019415294 1251 dbSNP
rs1290003170 1256 dbSNP
rs1320686291 1260 dbSNP
rs1008059055 1277 dbSNP
rs773330864 1279 dbSNP
rs1049699434 1291 dbSNP
rs976249198 1295 dbSNP
rs936321557 1303 dbSNP
rs962212358 1323 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084065. RNA binding protein: AGO2. Condition:CLIP_emetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ugUAGAUUCUGACGUUCUCAAga 5'
            | ||:||::  ||:|||||  
Target 5' ucACCUGAGGU--CAGGAGUU-- 3'
8 - 26
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084065
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_emetine_AbnovaAb
Location of target site ENST00000254942.3 | 3UTR | GGUAGGAUCACCUGAGGUCAGGAGUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
133 hsa-miR-4680-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT378771 MACC1 MACC1, MET transcriptional regulator 2 2
MIRT393867 ZDHHC21 zinc finger DHHC-type containing 21 2 4
MIRT446684 C2CD2 C2 calcium dependent domain containing 2 2 2
MIRT447600 MRPL3 mitochondrial ribosomal protein L3 2 2
MIRT450708 RNF152 ring finger protein 152 2 2
MIRT450784 PAPOLG poly(A) polymerase gamma 2 2
MIRT454623 COL23A1 collagen type XXIII alpha 1 chain 2 8
MIRT461620 PTCD3 pentatricopeptide repeat domain 3 2 2
MIRT462695 SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 2 2
MIRT475530 HOXA3 homeobox A3 2 8
MIRT475739 HERPUD1 homocysteine inducible ER protein with ubiquitin like domain 1 2 4
MIRT489676 CYP1A1 cytochrome P450 family 1 subfamily A member 1 2 2
MIRT490610 SLC47A1 solute carrier family 47 member 1 2 2
MIRT493628 HIC2 HIC ZBTB transcriptional repressor 2 2 2
MIRT496152 RPS15A ribosomal protein S15a 2 2
MIRT499232 VAV3 vav guanine nucleotide exchange factor 3 2 4
MIRT501496 PRICKLE2 prickle planar cell polarity protein 2 2 2
MIRT507163 GAS2L3 growth arrest specific 2 like 3 2 2
MIRT512389 MTRNR2L1 MT-RNR2-like 1 2 4
MIRT514626 MTRNR2L7 MT-RNR2-like 7 2 2
MIRT517474 PEX26 peroxisomal biogenesis factor 26 2 2
MIRT525332 CNGB1 cyclic nucleotide gated channel beta 1 2 2
MIRT526685 BAK1 BCL2 antagonist/killer 1 2 2
MIRT527317 CCR2 C-C motif chemokine receptor 2 2 2
MIRT527608 EYS eyes shut homolog (Drosophila) 2 2
MIRT528794 RAB32 RAB32, member RAS oncogene family 2 2
MIRT531048 TIPARP TCDD inducible poly(ADP-ribose) polymerase 2 2
MIRT532254 TBPL2 TATA-box binding protein like 2 2 2
MIRT533801 TMED7 transmembrane p24 trafficking protein 7 2 4
MIRT535887 MLEC malectin 2 2
MIRT540704 PDPK1 3-phosphoinositide dependent protein kinase 1 2 4
MIRT544645 PHF8 PHD finger protein 8 2 4
MIRT545760 HS3ST1 heparan sulfate-glucosamine 3-sulfotransferase 1 2 2
MIRT555310 PPP2R5C protein phosphatase 2 regulatory subunit B'gamma 2 2
MIRT555877 PAFAH1B2 platelet activating factor acetylhydrolase 1b catalytic subunit 2 2 4
MIRT559507 ARID5B AT-rich interaction domain 5B 2 2
MIRT560448 SLC30A7 solute carrier family 30 member 7 2 2
MIRT561262 ZIK1 zinc finger protein interacting with K protein 1 2 2
MIRT561795 PAWR pro-apoptotic WT1 regulator 2 2
MIRT567007 KLHL15 kelch like family member 15 2 2
MIRT569298 SURF6 surfeit 6 2 2
MIRT570606 MTRNR2L11 MT-RNR2-like 11 2 2
MIRT572888 ADCY2 adenylate cyclase 2 2 2
MIRT573119 ADAMTS18 ADAM metallopeptidase with thrombospondin type 1 motif 18 2 2
MIRT608332 ZNF670 zinc finger protein 670 2 6
MIRT614942 KCNK5 potassium two pore domain channel subfamily K member 5 2 2
MIRT615324 ERN1 endoplasmic reticulum to nucleus signaling 1 2 2
MIRT618441 ZNF800 zinc finger protein 800 2 2
MIRT620110 HARBI1 harbinger transposase derived 1 2 2
MIRT626008 ZNF517 zinc finger protein 517 2 2
MIRT626626 SLC30A6 solute carrier family 30 member 6 2 2
MIRT627842 POU3F1 POU class 3 homeobox 1 2 2
MIRT628386 CACNB2 calcium voltage-gated channel auxiliary subunit beta 2 2 2
MIRT629305 PTPLAD2 3-hydroxyacyl-CoA dehydratase 4 1 1
MIRT629864 GATAD1 GATA zinc finger domain containing 1 2 2
MIRT630444 IDE insulin degrading enzyme 2 2
MIRT631854 PIGG phosphatidylinositol glycan anchor biosynthesis class G 2 2
MIRT633173 AGO3 argonaute 3, RISC catalytic component 2 2
MIRT633477 ZNF724P zinc finger protein 724 2 2
MIRT634395 PLSCR1 phospholipid scramblase 1 2 2
MIRT635538 TRIM72 tripartite motif containing 72 2 2
MIRT635821 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT636169 TIMM8A translocase of inner mitochondrial membrane 8A 2 2
MIRT636797 CYB5D1 cytochrome b5 domain containing 1 2 2
MIRT637952 IVD isovaleryl-CoA dehydrogenase 2 2
MIRT645136 HES2 hes family bHLH transcription factor 2 2 2
MIRT645667 ADK adenosine kinase 2 2
MIRT646148 FLVCR1 feline leukemia virus subgroup C cellular receptor 1 2 2
MIRT647004 NCR3LG1 natural killer cell cytotoxicity receptor 3 ligand 1 2 2
MIRT648187 C2orf68 chromosome 2 open reading frame 68 2 2
MIRT650090 TERF2 telomeric repeat binding factor 2 2 2
MIRT650329 RTN2 reticulon 2 2 2
MIRT654224 RNF165 ring finger protein 165 2 2
MIRT654545 RAB1A RAB1A, member RAS oncogene family 2 2
MIRT656457 MAPK14 mitogen-activated protein kinase 14 2 2
MIRT656828 KLF8 Kruppel like factor 8 2 2
MIRT657112 ITPRIPL2 inositol 1,4,5-trisphosphate receptor interacting protein like 2 2 2
MIRT657930 GATSL2 cytosolic arginine sensor for mTORC1 subunit 2 2 2
MIRT659375 CREG2 cellular repressor of E1A stimulated genes 2 2 2
MIRT659833 CARHSP1 calcium regulated heat stable protein 1 2 2
MIRT662108 LACTB lactamase beta 2 4
MIRT662789 TBC1D25 TBC1 domain family member 25 2 2
MIRT669501 ARL3 ADP ribosylation factor like GTPase 3 2 2
MIRT669759 ZNF101 zinc finger protein 101 2 4
MIRT669800 GAN gigaxonin 2 2
MIRT670050 RPP14 ribonuclease P/MRP subunit p14 2 2
MIRT670299 RBBP4 RB binding protein 4, chromatin remodeling factor 2 2
MIRT670388 EMP2 epithelial membrane protein 2 2 2
MIRT672862 C22orf29 retrotransposon Gag like 10 2 2
MIRT672890 FXN frataxin 2 2
MIRT673210 C10orf76 chromosome 10 open reading frame 76 2 2
MIRT674001 KCNN3 potassium calcium-activated channel subfamily N member 3 2 2
MIRT674163 BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 2 2
MIRT674502 TIRAP TIR domain containing adaptor protein 2 2
MIRT675470 NUBPL nucleotide binding protein like 2 2
MIRT675671 TMOD2 tropomodulin 2 2 2
MIRT676006 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676074 TIMM50 translocase of inner mitochondrial membrane 50 2 2
MIRT676386 SEC24D SEC24 homolog D, COPII coat complex component 2 2
MIRT676764 SNX2 sorting nexin 2 2 2
MIRT676896 GABPB1 GA binding protein transcription factor beta subunit 1 2 2
MIRT676978 ZNF708 zinc finger protein 708 2 2
MIRT677236 C15orf40 chromosome 15 open reading frame 40 2 2
MIRT677369 HSPA4L heat shock protein family A (Hsp70) member 4 like 2 2
MIRT677464 PDLIM3 PDZ and LIM domain 3 2 2
MIRT678081 EIF2A eukaryotic translation initiation factor 2A 2 2
MIRT678093 ATCAY ATCAY, caytaxin 2 2
MIRT678324 FBLIM1 filamin binding LIM protein 1 2 2
MIRT678417 ANKRD36 ankyrin repeat domain 36 2 2
MIRT678521 ZNF347 zinc finger protein 347 2 2
MIRT678700 TRIP11 thyroid hormone receptor interactor 11 2 2
MIRT678829 PDE6A phosphodiesterase 6A 2 2
MIRT679991 RUNDC1 RUN domain containing 1 2 2
MIRT680751 PSD4 pleckstrin and Sec7 domain containing 4 2 2
MIRT681249 ZNF383 zinc finger protein 383 2 2
MIRT681422 GTF3C6 general transcription factor IIIC subunit 6 2 2
MIRT681948 SLC19A3 solute carrier family 19 member 3 2 2
MIRT689278 C5AR2 complement component 5a receptor 2 2 2
MIRT690389 PARP15 poly(ADP-ribose) polymerase family member 15 2 2
MIRT691845 OSCAR osteoclast associated, immunoglobulin-like receptor 2 2
MIRT693863 IYD iodotyrosine deiodinase 2 2
MIRT696002 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT701930 MLLT1 MLLT1, super elongation complex subunit 2 2
MIRT702341 KLHL7 kelch like family member 7 2 2
MIRT703557 FKBP14 FK506 binding protein 14 2 2
MIRT705033 CACUL1 CDK2 associated cullin domain 1 2 2
MIRT706341 STAC2 SH3 and cysteine rich domain 2 2 2
MIRT709671 RGP1 RGP1 homolog, RAB6A GEF complex partner 1 2 2
MIRT711212 EFHB EF-hand domain family member B 2 2
MIRT718342 PURA purine rich element binding protein A 2 2
MIRT722755 SIRPB2 signal regulatory protein beta 2 2 2
MIRT723535 NFATC2IP nuclear factor of activated T-cells 2 interacting protein 2 2
MIRT724498 BFAR bifunctional apoptosis regulator 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4680-5p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)

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