miRTarBase - #MIRT650367


—
pre-miRNA Information
pre-miRNA hsa-mir-4747   
Genomic Coordinates chr19: 4932687 - 4932740
Description Homo sapiens miR-4747 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4747-5p
Sequence 1| AGGGAAGGAGGCUUGGUCUUAG |22
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs560927363 4 dbSNP
rs1471226927 10 dbSNP
rs763137545 12 dbSNP
rs767337154 15 dbSNP
rs775298039 16 dbSNP
rs760472311 19 dbSNP
rs1207950315 21 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol MOCS3   
Synonyms UBA4
Description molybdenum cofactor synthesis 3
Transcript NM_014484   
Expression
Putative miRNA Targets on MOCS3
3'UTR of MOCS3
(miRNA target sites are highlighted)		 
>MOCS3|NM_014484|3'UTR
   1 GGTGACTGGTATAGTCTGATGAGAAAGATGTGGATTGCCATAATACCTCAAAGATACACTTGTTTGCATTTTTCGGTAAT
  81 ATACATAGGAGCTGGGGATTCTACAGTATCTGTGAATACGTGGACTCCTTTTTATAAGGAGTTTTAAAAATTGTTATGTA
 161 TTGGATGAATGACTTATTAATGGATTATACCGTTTCTGAGAACCATCATTTTTTTTTTCAGCACACGGAGGATGTCTTGG
 241 ACATGTGAGATGTAACGTGACAGGATTTTGCATTTTAAACTGCAGATCATTTACATGTCCTTATTTTCCACCTCCCCCAG
 321 TCAAAATGCTTTCTAAATCATTTTCACAGATTATATACTTCGGATCTGTTTACTGTTCAGTTAAGAAATTCTTGGATCTT
 401 ATTAATATTTCAGATGATAGAATACATCCTACAGAAATACATGTTTAAAATGTAAATTGTTTTAATTATTCAGAAAGAGG
 481 GTCATTCTATTTGGCCTTTTGAATTAGTATCAAAATGAGATTTTTTTTTTTTTTTTGAGATGGAATCTCTCTCTGTTGCC
 561 CAGGCTGGAGTGTAGTGGTGCGATCTCAGCTCACTGCAACCTCCGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCT
 641 CCTGAGTAGCTGGGATTACAGGCGCACGCCACCACGCCTGGCTAATTTTTGTATTTTTAGTACAGAGGGGGTTTCACCAT
 721 GTTTGTCAGGCTGGTCTCGAACTCCTGACCTCGTGATCCGCCTGCCTCGACTTCCCAGAGTGCTGGGATTACAGGCGTGA
 801 GCCACCACACCCTCCCGAGATCTTTAAAGTTTACCAAAATAAAGGAAACCACCTTTGTAGTCTGTCAGTGTCTCTTATAA
 881 ATTGCTACTGTTTTCTTAAAGTTAACTTCAGGGTCCACCTTATGTTGCACACATATCACATCGTTTAAATTGCATACTAT
 961 GGTTTGACTTGCTTTGGAATTTTCAAGTCAAAGTCCCAACCCTTTGCCTCTCCCCCTTTAATTTGCCTTTTCTCTTTTGA
1041 TTTAATGTTTTTTTATTCCAGCATTTTATACTAATGTAAAATGTTTTTATGTTTGTTTACTTAACATTTTCATAAAATAG
1121 TAGGTAGTCTCACCAACTTCCAATATATACAACAACATTATAAGTAAAAATTTGATTTGTGAGTGCCTATCAGTGGCCAG
1201 ATGAACTAATGGCTTGTCAGAAGGGGGCCTGTGACCTCCTGCTTGCTGCATGCAGGCTTATAATCATCAATTGCTGCTGT
1281 TGTTTTTTTAAGAATGGCAGAAATCACAGATACAACTATAAAATCTTTGTATTTCTGTTAACCATTTTTTTTAAAGCTTA
1361 AATGTATCATAAGCCAGCAAAAACCCTTTGTAGACCAGATTTACTTACCAGTTTGCAATTTGTGATATAGAATCTTGTTT
1441 TATTATAAGAGGGTGGTATTTAACAAATTCAAAATTAGTCATCACTTTTTAACTGTGAAACATTGTAACTAATTCTTTGA
1521 ACAGGTATACTTAAAGTATGGTATACCCTTCTGTTATAAAGATGAAGCAGGTCTCTTATGACTGTTCCTGCCAACGAGTT
1601 ATGGAGGTAAATGACTGTGACCTGGAGTGGAGAACAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' gaUUC-UGGUUCGGA---GGA-AGGGa 5'
            |||  |||| |||   ||| |||| 
Target 5' caAAGTCCCAACCCTTTGCCTCTCCCc 3'
 989 - 1015 132.00 -16.50
2 
miRNA  3' gaUUCUGGUUCG----GAGGAAGGGa 5'
            |:| :|||||    ||||| ||: 
Target 5' ccAGGTTCAAGCGATTCTCCTGCCTc 3'
 610 - 635 122.00 -18.30
3 
miRNA  3' gauuCUGGUU---CGGAG--GAAGGGa 5'
              ||:| :   |||||  |||||| 
Target 5' tcgtGATCCGCCTGCCTCGACTTCCCa 3'
 751 - 777 122.00 -18.40
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31479669 17 COSMIC
COSN31490035 24 COSMIC
COSN31488256 27 COSMIC
COSN2516994 40 COSMIC
COSN30529647 41 COSMIC
COSN30150382 54 COSMIC
COSN31517857 92 COSMIC
COSN30122558 176 COSMIC
COSN28467906 219 COSMIC
COSN31490469 220 COSMIC
COSN31552506 225 COSMIC
COSN26575056 313 COSMIC
COSN15625338 314 COSMIC
COSN15625340 316 COSMIC
COSN30120519 362 COSMIC
COSN30510509 374 COSMIC
COSN30510507 375 COSMIC
COSN31487140 379 COSMIC
COSN31585207 379 COSMIC
COSN5445359 438 COSMIC
COSN15589408 485 COSMIC
COSN18766406 537 COSMIC
COSN20116566 537 COSMIC
COSN31588575 543 COSMIC
COSN31491638 550 COSMIC
COSN30159270 583 COSMIC
COSN30527631 586 COSMIC
COSN31548137 623 COSMIC
COSN24307032 669 COSMIC
COSN15625341 753 COSMIC
COSN30122768 760 COSMIC
COSN26506233 808 COSMIC
COSN30139578 817 COSMIC
COSN30534655 917 COSMIC
COSN15625342 920 COSMIC
COSN31522973 935 COSMIC
COSN15625343 985 COSMIC
COSN30526933 1004 COSMIC
COSN30143385 1008 COSMIC
COSN22228272 1105 COSMIC
COSN32063638 1135 COSMIC
COSN28898906 1226 COSMIC
COSN23104179 1304 COSMIC
COSN1875196 1762 COSMIC
COSN1875198 1780 COSMIC
COSN24379213 1827 COSMIC
COSN30425319 1966 COSMIC
COSN1875200 1980 COSMIC
COSN6560741 2145 COSMIC
COSN1875202 2209 COSMIC
COSN15673265 2407 COSMIC
COSN5973306 2927 COSMIC
COSN25034425 2952 COSMIC
COSN23367646 3096 COSMIC
COSN8995526 3541 COSMIC
COSN16477590 3671 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs766717424 1 dbSNP
rs1254850716 3 dbSNP
rs1454623267 6 dbSNP
rs141101930 8 dbSNP
rs1163947184 9 dbSNP
rs985195809 10 dbSNP
rs912247323 13 dbSNP
rs755102101 27 dbSNP
rs781482895 28 dbSNP
rs753699166 40 dbSNP
rs757262272 44 dbSNP
rs778536609 45 dbSNP
rs1327279616 48 dbSNP
rs748932034 50 dbSNP
rs1042061238 54 dbSNP
rs528194080 58 dbSNP
rs1189334394 62 dbSNP
rs1481617282 74 dbSNP
rs1194696258 75 dbSNP
rs1203604382 84 dbSNP
rs1339838896 88 dbSNP
rs902455081 97 dbSNP
rs768419943 103 dbSNP
rs556417017 107 dbSNP
rs1181060358 111 dbSNP
rs1453706385 119 dbSNP
rs1376229082 121 dbSNP
rs1054061479 124 dbSNP
rs1396697088 148 dbSNP
rs574596240 150 dbSNP
rs1409559459 156 dbSNP
rs535451501 157 dbSNP
rs1417578922 159 dbSNP
rs746394242 169 dbSNP
rs1434957051 170 dbSNP
rs1288525501 171 dbSNP
rs1376574470 184 dbSNP
rs1013421228 188 dbSNP
rs1384052791 193 dbSNP
rs1022982535 197 dbSNP
rs907227461 205 dbSNP
rs7343617 206 dbSNP
rs1181390315 208 dbSNP
rs1002858716 209 dbSNP
rs1015532557 209 dbSNP
rs553453274 209 dbSNP
rs1486155016 212 dbSNP
rs1255467372 219 dbSNP
rs76083501 220 dbSNP
rs761328028 224 dbSNP
rs769228580 228 dbSNP
rs1308279180 240 dbSNP
rs974346463 244 dbSNP
rs1348948341 251 dbSNP
rs1370958942 255 dbSNP
rs1027577330 256 dbSNP
rs1415010040 257 dbSNP
rs1401121651 258 dbSNP
rs1300743781 270 dbSNP
rs566830077 271 dbSNP
rs954212848 273 dbSNP
rs1158261141 281 dbSNP
rs1306206948 284 dbSNP
rs1419756770 285 dbSNP
rs1188440286 286 dbSNP
rs572137687 296 dbSNP
rs6122987 301 dbSNP
rs1255670980 313 dbSNP
rs146894331 315 dbSNP
rs912341361 317 dbSNP
rs533857401 318 dbSNP
rs943749781 320 dbSNP
rs1259856290 328 dbSNP
rs1208632437 330 dbSNP
rs1327777447 338 dbSNP
rs1295481589 356 dbSNP
rs1234236159 363 dbSNP
rs1340284542 374 dbSNP
rs762832196 375 dbSNP
rs576663894 376 dbSNP
rs1385035637 380 dbSNP
rs1177334368 382 dbSNP
rs1319383031 383 dbSNP
rs11542754 388 dbSNP
rs1455549377 394 dbSNP
rs565184745 396 dbSNP
rs1206429609 399 dbSNP
rs1250564365 403 dbSNP
rs766208649 406 dbSNP
rs1457182371 414 dbSNP
rs577012970 427 dbSNP
rs571225071 429 dbSNP
rs1366497639 442 dbSNP
rs936592546 455 dbSNP
rs1430575843 456 dbSNP
rs1053669279 457 dbSNP
rs1188046172 460 dbSNP
rs1463620787 461 dbSNP
rs894990668 480 dbSNP
rs1210966340 481 dbSNP
rs1158086274 482 dbSNP
rs1356022938 483 dbSNP
rs1364647424 484 dbSNP
rs200423195 521 dbSNP
rs368395663 521 dbSNP
rs1296198235 525 dbSNP
rs1455512365 525 dbSNP
rs947884184 528 dbSNP
rs1043235560 536 dbSNP
rs79292126 538 dbSNP
rs1393857657 539 dbSNP
rs1386151937 543 dbSNP
rs1388288676 546 dbSNP
rs1046203882 547 dbSNP
rs907322205 553 dbSNP
rs1463689563 554 dbSNP
rs1328517704 556 dbSNP
rs1002912540 559 dbSNP
rs906057325 574 dbSNP
rs563200090 575 dbSNP
rs530302820 582 dbSNP
rs1200185961 583 dbSNP
rs1451606226 587 dbSNP
rs1265669387 589 dbSNP
rs1391242066 591 dbSNP
rs1057189258 593 dbSNP
rs548580628 601 dbSNP
rs1308133358 605 dbSNP
rs185527348 606 dbSNP
rs1225732645 608 dbSNP
rs1004801731 613 dbSNP
rs1349340824 614 dbSNP
rs1240783781 622 dbSNP
rs527817427 623 dbSNP
rs897122738 637 dbSNP
rs1014919148 641 dbSNP
rs1333542313 648 dbSNP
rs1213704295 662 dbSNP
rs1330609369 663 dbSNP
rs112652998 664 dbSNP
rs994740671 665 dbSNP
rs1428129210 666 dbSNP
rs1029224112 668 dbSNP
rs1251011121 669 dbSNP
rs371870989 676 dbSNP
rs1186087068 677 dbSNP
rs1184640010 681 dbSNP
rs1417334292 684 dbSNP
rs1462091175 685 dbSNP
rs1167179865 686 dbSNP
rs987721119 699 dbSNP
rs112247357 703 dbSNP
rs866975310 706 dbSNP
rs1251558820 711 dbSNP
rs1202567984 712 dbSNP
rs1019790744 716 dbSNP
rs538038995 722 dbSNP
rs141778569 731 dbSNP
rs977801842 732 dbSNP
rs1228947106 738 dbSNP
rs568357649 739 dbSNP
rs1376012531 740 dbSNP
rs1286301349 742 dbSNP
rs934765886 749 dbSNP
rs1394595651 750 dbSNP
rs956443788 751 dbSNP
rs987802102 753 dbSNP
rs535369563 754 dbSNP
rs957703988 757 dbSNP
rs866619610 759 dbSNP
rs538081343 760 dbSNP
rs112983940 761 dbSNP
rs147086478 769 dbSNP
rs375615529 770 dbSNP
rs937493268 793 dbSNP
rs74274627 797 dbSNP
rs1203755256 798 dbSNP
rs938778276 800 dbSNP
rs372412518 804 dbSNP
rs1285815436 805 dbSNP
rs1481494106 807 dbSNP
rs897158965 817 dbSNP
rs995546650 818 dbSNP
rs371847955 823 dbSNP
rs1257155698 826 dbSNP
rs779087345 830 dbSNP
rs1048855303 832 dbSNP
rs1284931632 833 dbSNP
rs1447592250 842 dbSNP
rs1338762118 843 dbSNP
rs543942842 856 dbSNP
rs890082103 857 dbSNP
rs1427945628 858 dbSNP
rs1157614296 869 dbSNP
rs1004958791 887 dbSNP
rs2143538 895 dbSNP
rs1356720866 898 dbSNP
rs899193501 914 dbSNP
rs1415000564 924 dbSNP
rs994814696 934 dbSNP
rs1471646583 937 dbSNP
rs1433323383 941 dbSNP
rs1028878446 943 dbSNP
rs375186239 944 dbSNP
rs1215492084 945 dbSNP
rs953426306 955 dbSNP
rs376711466 960 dbSNP
rs1227953367 962 dbSNP
rs1299888261 963 dbSNP
rs1008691764 967 dbSNP
rs1285539748 977 dbSNP
rs1019232871 978 dbSNP
rs1319065042 983 dbSNP
rs1359268284 986 dbSNP
rs1350830753 990 dbSNP
rs1164568083 995 dbSNP
rs956432068 999 dbSNP
rs1030721548 1001 dbSNP
rs575112174 1013 dbSNP
rs1168871222 1014 dbSNP
rs369053297 1016 dbSNP
rs1372591356 1026 dbSNP
rs560583658 1028 dbSNP
rs1296290615 1036 dbSNP
rs1309167854 1048 dbSNP
rs1488803624 1048 dbSNP
rs761596349 1048 dbSNP
rs1219165816 1055 dbSNP
rs916230504 1060 dbSNP
rs967678052 1061 dbSNP
rs1229433081 1076 dbSNP
rs1231875742 1076 dbSNP
rs1279309654 1077 dbSNP
rs980856147 1078 dbSNP
rs1295584289 1093 dbSNP
rs927531068 1096 dbSNP
rs11469824 1101 dbSNP
rs1368979418 1111 dbSNP
rs937630945 1114 dbSNP
rs1293483702 1116 dbSNP
rs927806363 1119 dbSNP
rs750507871 1121 dbSNP
rs1372802701 1126 dbSNP
rs1308197940 1127 dbSNP
rs1428771847 1138 dbSNP
rs940506743 1141 dbSNP
rs1177651898 1149 dbSNP
rs1213320502 1152 dbSNP
rs1433676974 1157 dbSNP
rs1057294741 1162 dbSNP
rs1424313308 1181 dbSNP
rs1189428354 1183 dbSNP
rs138007418 1184 dbSNP
rs74685850 1188 dbSNP
rs1187182022 1190 dbSNP
rs529206511 1193 dbSNP
rs759374906 1198 dbSNP
rs1482876864 1201 dbSNP
rs1272549439 1202 dbSNP
rs564590527 1209 dbSNP
rs1453081956 1211 dbSNP
rs1212273589 1214 dbSNP
rs149472258 1221 dbSNP
rs1301107799 1223 dbSNP
rs1396090855 1225 dbSNP
rs1036379782 1228 dbSNP
rs549979750 1232 dbSNP
rs1352699553 1235 dbSNP
rs767613441 1240 dbSNP
rs143033040 1251 dbSNP
rs1343065595 1255 dbSNP
rs1304247005 1261 dbSNP
rs1358071751 1263 dbSNP
rs1429484563 1263 dbSNP
rs148184895 1266 dbSNP
rs1473572946 1267 dbSNP
rs547365597 1272 dbSNP
rs1181250263 1274 dbSNP
rs529294533 1278 dbSNP
rs1248643553 1281 dbSNP
rs565596915 1283 dbSNP
rs1367320846 1287 dbSNP
rs1483586345 1295 dbSNP
rs541396676 1296 dbSNP
rs930611884 1306 dbSNP
rs1302530675 1308 dbSNP
rs1208634833 1309 dbSNP
rs193203843 1314 dbSNP
rs889035154 1319 dbSNP
rs1220672754 1320 dbSNP
rs557303540 1325 dbSNP
rs1349045623 1331 dbSNP
rs201480641 1332 dbSNP
rs6013047 1334 dbSNP
rs1316543919 1342 dbSNP
rs184267219 1344 dbSNP
rs1031570673 1345 dbSNP
rs957852217 1345 dbSNP
rs892280755 1348 dbSNP
rs1023309458 1370 dbSNP
rs1158375590 1371 dbSNP
rs556746325 1375 dbSNP
rs1369992995 1379 dbSNP
rs574933264 1381 dbSNP
rs1189864609 1387 dbSNP
rs542235331 1398 dbSNP
rs982015438 1409 dbSNP
rs1181877177 1412 dbSNP
rs1466325407 1420 dbSNP
rs1009417609 1426 dbSNP
rs141874669 1429 dbSNP
rs529550437 1435 dbSNP
rs1405400662 1439 dbSNP
rs971960050 1441 dbSNP
rs920413023 1443 dbSNP
rs1399728908 1445 dbSNP
rs1159332526 1446 dbSNP
rs1320801943 1463 dbSNP
rs754017537 1475 dbSNP
rs1310171501 1481 dbSNP
rs1436596685 1483 dbSNP
rs1319743362 1486 dbSNP
rs967795793 1486 dbSNP
rs931421712 1494 dbSNP
rs980462890 1496 dbSNP
rs1438010159 1501 dbSNP
rs780903401 1513 dbSNP
rs1200668539 1514 dbSNP
rs984571810 1516 dbSNP
rs1163664264 1519 dbSNP
rs1325144543 1520 dbSNP
rs1033798821 1523 dbSNP
rs1371636703 1525 dbSNP
rs544837652 1526 dbSNP
rs942649155 1528 dbSNP
rs879340408 1531 dbSNP
rs751495399 1533 dbSNP
rs1231669313 1536 dbSNP
rs1372290169 1541 dbSNP
rs993508615 1544 dbSNP
rs1224563256 1547 dbSNP
rs1041054372 1548 dbSNP
rs747759085 1558 dbSNP
rs563021841 1562 dbSNP
rs757450258 1570 dbSNP
rs146281424 1572 dbSNP
rs765618713 1583 dbSNP
rs769320628 1585 dbSNP
rs1213133760 1587 dbSNP
rs1342241744 1588 dbSNP
rs139394158 1591 dbSNP
rs893933724 1594 dbSNP
rs1470201260 1596 dbSNP
rs1180160345 1599 dbSNP
rs1301459357 1599 dbSNP
rs1431921875 1612 dbSNP
rs972211286 1621 dbSNP
rs551863380 1623 dbSNP
rs1390834197 1625 dbSNP
rs920640937 1636 dbSNP
rs1010660218 1641 dbSNP
rs5841821 1641 dbSNP
rs1168097702 1645 dbSNP
rs1474483118 1647 dbSNP
rs1232697546 1652 dbSNP
rs1379841835 1655 dbSNP
rs1470691539 1656 dbSNP
rs1200208792 1662 dbSNP
rs1432908293 1667 dbSNP
rs1177442922 1668 dbSNP
rs930761383 1669 dbSNP
rs1480615666 1672 dbSNP
rs1267285361 1674 dbSNP
rs1023783605 1681 dbSNP
rs546233199 1696 dbSNP
rs1483201004 1706 dbSNP
rs564455340 1708 dbSNP
rs1050440798 1712 dbSNP
rs889143902 1713 dbSNP
rs188689720 1714 dbSNP
rs904883887 1717 dbSNP
rs1163567157 1718 dbSNP
rs541872162 1723 dbSNP
rs1034644298 1733 dbSNP
rs1290051339 1738 dbSNP
rs1326713108 1740 dbSNP
rs1371349199 1752 dbSNP
rs892396557 1758 dbSNP
rs561958736 1759 dbSNP
rs1009366864 1762 dbSNP
rs961967891 1763 dbSNP
rs1353720646 1770 dbSNP
rs1442582256 1771 dbSNP
rs1022178327 1776 dbSNP
rs370944222 1776 dbSNP
rs1473135164 1777 dbSNP
rs529087597 1781 dbSNP
rs903599887 1790 dbSNP
rs972356130 1791 dbSNP
rs552002599 1794 dbSNP
rs1232799740 1796 dbSNP
rs1321393757 1805 dbSNP
rs1027491707 1806 dbSNP
rs1228741631 1819 dbSNP
rs1293948473 1827 dbSNP
rs142605182 1845 dbSNP
rs1033331815 1850 dbSNP
rs1440366937 1851 dbSNP
rs951947947 1858 dbSNP
rs1175268523 1867 dbSNP
rs150561154 1877 dbSNP
rs533024445 1892 dbSNP
rs1414379018 1899 dbSNP
rs181088521 1902 dbSNP
rs1162039280 1903 dbSNP
rs1458035189 1911 dbSNP
rs569289353 1913 dbSNP
rs1466717620 1914 dbSNP
rs183622999 1914 dbSNP
rs1473611299 1919 dbSNP
rs1438759362 1924 dbSNP
rs942744257 1926 dbSNP
rs781106083 1937 dbSNP
rs1459616309 1939 dbSNP
rs962271602 1948 dbSNP
rs976789111 1949 dbSNP
rs527714831 1953 dbSNP
rs935579603 1961 dbSNP
rs1053078911 1968 dbSNP
rs893995008 1977 dbSNP
rs758736534 1978 dbSNP
rs1285025112 1979 dbSNP
rs16995642 1986 dbSNP
rs1039593298 1987 dbSNP
rs1323070927 1991 dbSNP
rs1436532945 1994 dbSNP
rs930730798 1998 dbSNP
rs1344966048 2000 dbSNP
rs1045214784 2001 dbSNP
rs1395673554 2002 dbSNP
rs1414023917 2005 dbSNP
rs1162292097 2009 dbSNP
rs986598469 2017 dbSNP
rs904988537 2019 dbSNP
rs1189134130 2020 dbSNP
rs1240123891 2022 dbSNP
rs1223432154 2023 dbSNP
rs535677245 2024 dbSNP
rs554369267 2025 dbSNP
rs558743048 2027 dbSNP
rs913820831 2028 dbSNP
rs1299994069 2038 dbSNP
rs1229745653 2042 dbSNP
rs993446261 2046 dbSNP
rs945311902 2047 dbSNP
rs1268968536 2048 dbSNP
rs1313665662 2057 dbSNP
rs1342361333 2059 dbSNP
rs1350850918 2062 dbSNP
rs1302137330 2064 dbSNP
rs1422434839 2066 dbSNP
rs1043568046 2070 dbSNP
rs903710376 2071 dbSNP
rs1295033144 2075 dbSNP
rs200553643 2077 dbSNP
rs1417248269 2081 dbSNP
rs1192854450 2085 dbSNP
rs747453947 2095 dbSNP
rs1478199835 2099 dbSNP
rs1245970451 2103 dbSNP
rs767173181 2106 dbSNP
rs1222013677 2111 dbSNP
rs1017447200 2114 dbSNP
rs1055252099 2115 dbSNP
rs1205895627 2119 dbSNP
rs1307000957 2120 dbSNP
rs896242285 2122 dbSNP
rs1013628709 2123 dbSNP
rs114478909 2126 dbSNP
rs962261524 2144 dbSNP
rs575633029 2152 dbSNP
rs752421804 2153 dbSNP
rs922602435 2153 dbSNP
rs899787689 2154 dbSNP
rs762175839 2156 dbSNP
rs558229413 2166 dbSNP
rs1443707724 2167 dbSNP
rs915510792 2169 dbSNP
rs73265733 2172 dbSNP
rs1352273386 2190 dbSNP
rs1178123950 2193 dbSNP
rs1045240057 2194 dbSNP
rs750597499 2197 dbSNP
rs1197069236 2203 dbSNP
rs1473462069 2204 dbSNP
rs926756994 2206 dbSNP
rs910588046 2214 dbSNP
rs1183182208 2218 dbSNP
rs939106030 2227 dbSNP
rs189289768 2236 dbSNP
rs1056116997 2238 dbSNP
rs1313348143 2258 dbSNP
rs1263087929 2260 dbSNP
rs1222024765 2271 dbSNP
rs1282871802 2283 dbSNP
rs149998395 2287 dbSNP
rs966195853 2297 dbSNP
rs1433808008 2301 dbSNP
rs529360233 2302 dbSNP
rs913934986 2303 dbSNP
rs897508832 2308 dbSNP
rs145201817 2312 dbSNP
rs1304115968 2314 dbSNP
rs1448637469 2319 dbSNP
rs1174222309 2322 dbSNP
rs1405197999 2322 dbSNP
rs537750583 2322 dbSNP
rs1412515937 2323 dbSNP
rs559107619 2325 dbSNP
rs1160104459 2334 dbSNP
rs1418763081 2347 dbSNP
rs1248481492 2348 dbSNP
rs758393030 2352 dbSNP
rs925234704 2353 dbSNP
rs1437927890 2355 dbSNP
rs1202339879 2356 dbSNP
rs533089690 2357 dbSNP
rs551250597 2358 dbSNP
rs569355886 2360 dbSNP
rs1054966582 2364 dbSNP
rs965831130 2365 dbSNP
rs1314459024 2366 dbSNP
rs1347614355 2367 dbSNP
rs1228352718 2372 dbSNP
rs777824159 2378 dbSNP
rs373256369 2383 dbSNP
rs140681206 2384 dbSNP
rs374020577 2387 dbSNP
rs567274796 2390 dbSNP
rs180818013 2391 dbSNP
rs187662912 2394 dbSNP
rs1250992433 2395 dbSNP
rs1453646615 2399 dbSNP
rs1167182568 2405 dbSNP
rs1445250355 2408 dbSNP
rs1384745835 2410 dbSNP
rs1182278423 2411 dbSNP
rs896849057 2413 dbSNP
rs915235629 2414 dbSNP
rs144593829 2417 dbSNP
rs1266775151 2418 dbSNP
rs191888360 2419 dbSNP
rs1358103880 2422 dbSNP
rs1158174013 2424 dbSNP
rs1028289664 2430 dbSNP
rs6020869 2433 dbSNP
rs1458826393 2437 dbSNP
rs371084854 2438 dbSNP
rs1365781361 2440 dbSNP
rs1008139101 2446 dbSNP
rs1056543979 2447 dbSNP
rs1392630952 2456 dbSNP
rs1295489001 2457 dbSNP
rs919025124 2475 dbSNP
rs929068169 2481 dbSNP
rs560378095 2482 dbSNP
rs1370892075 2484 dbSNP
rs1442157832 2492 dbSNP
rs1049239567 2499 dbSNP
rs1303817300 2506 dbSNP
rs865812907 2511 dbSNP
rs537066577 2512 dbSNP
rs976190479 2522 dbSNP
rs555704372 2523 dbSNP
rs1021070543 2525 dbSNP
rs966670968 2526 dbSNP
rs979434329 2528 dbSNP
rs1206634650 2536 dbSNP
rs1339488430 2540 dbSNP
rs1250636836 2541 dbSNP
rs1271263623 2544 dbSNP
rs925150277 2557 dbSNP
rs1301764535 2570 dbSNP
rs1489965132 2579 dbSNP
rs532687724 2583 dbSNP
rs937980457 2595 dbSNP
rs1405753182 2596 dbSNP
rs755807873 2617 dbSNP
rs1191599766 2640 dbSNP
rs1301557480 2646 dbSNP
rs917787292 2647 dbSNP
rs1397317779 2655 dbSNP
rs141857476 2658 dbSNP
rs901691845 2660 dbSNP
rs1379712271 2662 dbSNP
rs1200536704 2666 dbSNP
rs113896442 2671 dbSNP
rs997381385 2671 dbSNP
rs1417022762 2675 dbSNP
rs1036716704 2680 dbSNP
rs896917611 2681 dbSNP
rs1249284159 2684 dbSNP
rs1193969431 2685 dbSNP
rs1009618588 2698 dbSNP
rs1022718506 2700 dbSNP
rs541110153 2707 dbSNP
rs981002046 2711 dbSNP
rs1048099115 2714 dbSNP
rs1473646680 2715 dbSNP
rs960926999 2716 dbSNP
rs553423916 2717 dbSNP
rs1328332335 2720 dbSNP
rs1394442383 2726 dbSNP
rs770659108 2729 dbSNP
rs559162509 2730 dbSNP
rs552474379 2732 dbSNP
rs147089512 2733 dbSNP
rs778686862 2734 dbSNP
rs1470329721 2736 dbSNP
rs901990943 2737 dbSNP
rs997696879 2740 dbSNP
rs544755915 2743 dbSNP
rs1443672807 2748 dbSNP
rs1021015005 2749 dbSNP
rs531360239 2750 dbSNP
rs1202972886 2751 dbSNP
rs1038708483 2752 dbSNP
rs1269830469 2753 dbSNP
rs563441961 2758 dbSNP
rs1350721867 2760 dbSNP
rs1279222538 2762 dbSNP
rs966784545 2765 dbSNP
rs77455739 2766 dbSNP
rs1032377814 2767 dbSNP
rs959538253 2768 dbSNP
rs990774692 2774 dbSNP
rs1401670233 2777 dbSNP
rs548734143 2780 dbSNP
rs1406738158 2786 dbSNP
rs949188864 2788 dbSNP
rs972544072 2794 dbSNP
rs1473459554 2802 dbSNP
rs560926557 2811 dbSNP
rs903922700 2847 dbSNP
rs1002184049 2860 dbSNP
rs1033638575 2863 dbSNP
rs111610908 2867 dbSNP
rs1216191303 2871 dbSNP
rs1267071933 2874 dbSNP
rs918333797 2875 dbSNP
rs931098831 2876 dbSNP
rs1283762199 2877 dbSNP
rs1203674297 2879 dbSNP
rs1479572701 2883 dbSNP
rs1048524957 2889 dbSNP
rs1245851059 2908 dbSNP
rs1381156768 2909 dbSNP
rs140785828 2910 dbSNP
rs1484141188 2932 dbSNP
rs942380279 2935 dbSNP
rs1039261150 2936 dbSNP
rs1315768872 2939 dbSNP
rs150107333 2943 dbSNP
rs1186027029 2947 dbSNP
rs1162326693 2957 dbSNP
rs1442273790 2961 dbSNP
rs902102348 2963 dbSNP
rs1391867946 2974 dbSNP
rs182119481 2978 dbSNP
rs540048791 2979 dbSNP
rs2426215 2983 dbSNP
rs1240211093 2989 dbSNP
rs1021170463 2991 dbSNP
rs1490915444 2994 dbSNP
rs570275340 3003 dbSNP
rs1000986136 3005 dbSNP
rs908983498 3011 dbSNP
rs1371844123 3014 dbSNP
rs1221787841 3019 dbSNP
rs1357374291 3026 dbSNP
rs943084300 3027 dbSNP
rs1215728508 3028 dbSNP
rs1461848125 3032 dbSNP
rs1308994864 3033 dbSNP
rs1268839655 3034 dbSNP
rs974437602 3041 dbSNP
rs1032739590 3042 dbSNP
rs959376642 3053 dbSNP
rs1370833784 3059 dbSNP
rs1411315127 3070 dbSNP
rs1012673520 3074 dbSNP
rs1024809411 3075 dbSNP
rs970659937 3081 dbSNP
rs972532526 3090 dbSNP
rs1171058033 3096 dbSNP
rs1354273299 3103 dbSNP
rs1417097218 3106 dbSNP
rs918450172 3112 dbSNP
rs1480656239 3121 dbSNP
rs185957617 3132 dbSNP
rs1198981730 3133 dbSNP
rs1489876349 3134 dbSNP
rs933234631 3134 dbSNP
rs1305666728 3147 dbSNP
rs1205798117 3150 dbSNP
rs745739240 3152 dbSNP
rs1275125388 3163 dbSNP
rs1225661567 3164 dbSNP
rs910977640 3169 dbSNP
rs1209012835 3172 dbSNP
rs775573271 3174 dbSNP
rs1483659198 3176 dbSNP
rs942344781 3184 dbSNP
rs1374839934 3186 dbSNP
rs1418211054 3191 dbSNP
rs947266008 3192 dbSNP
rs772024221 3193 dbSNP
rs1440865409 3198 dbSNP
rs1260322338 3202 dbSNP
rs1338623908 3205 dbSNP
rs1470071291 3208 dbSNP
rs1428409206 3215 dbSNP
rs1428414680 3224 dbSNP
rs1431700203 3227 dbSNP
rs113667953 3229 dbSNP
rs1177814596 3237 dbSNP
rs1480351868 3239 dbSNP
rs1231612985 3240 dbSNP
rs555511253 3241 dbSNP
rs1462045384 3252 dbSNP
rs1262957583 3256 dbSNP
rs1221284520 3257 dbSNP
rs1002241519 3271 dbSNP
rs933592159 3275 dbSNP
rs1307297638 3279 dbSNP
rs1042566343 3283 dbSNP
rs1433187236 3283 dbSNP
rs1222635670 3284 dbSNP
rs1171435271 3286 dbSNP
rs1338608592 3294 dbSNP
rs902706126 3299 dbSNP
rs190334396 3300 dbSNP
rs1053845182 3304 dbSNP
rs573967899 3306 dbSNP
rs1448180173 3310 dbSNP
rs1455183483 3319 dbSNP
rs1012248051 3320 dbSNP
rs1347119726 3327 dbSNP
rs1160126226 3335 dbSNP
rs1418565528 3339 dbSNP
rs1378622799 3359 dbSNP
rs377484924 3360 dbSNP
rs534836851 3361 dbSNP
rs951013368 3362 dbSNP
rs1006415806 3366 dbSNP
rs970606147 3384 dbSNP
rs1214703755 3388 dbSNP
rs994070992 3393 dbSNP
rs1316586474 3402 dbSNP
rs1025536657 3415 dbSNP
rs1381899808 3427 dbSNP
rs1312840109 3429 dbSNP
rs974458759 3440 dbSNP
rs765610953 3449 dbSNP
rs1362469439 3460 dbSNP
rs1289665627 3465 dbSNP
rs553051596 3470 dbSNP
rs1358683491 3473 dbSNP
rs954339632 3480 dbSNP
rs988865294 3482 dbSNP
rs1385080547 3484 dbSNP
rs1186063738 3489 dbSNP
rs952550019 3492 dbSNP
rs577671892 3493 dbSNP
rs984370658 3506 dbSNP
rs1430646086 3509 dbSNP
rs1262949720 3523 dbSNP
rs1185538334 3537 dbSNP
rs910932692 3540 dbSNP
rs773512456 3543 dbSNP
rs544816807 3546 dbSNP
rs763100243 3551 dbSNP
rs976404972 3561 dbSNP
rs1358124237 3565 dbSNP
rs12481432 3566 dbSNP
rs927089759 3580 dbSNP
rs1229609729 3583 dbSNP
rs1298171240 3587 dbSNP
rs938104209 3603 dbSNP
rs1294650444 3605 dbSNP
rs1380340067 3608 dbSNP
rs1344042388 3613 dbSNP
rs1231804389 3614 dbSNP
rs1055104229 3618 dbSNP
rs896507745 3620 dbSNP
rs922289485 3626 dbSNP
rs1365097044 3627 dbSNP
rs563479944 3629 dbSNP
rs1161971256 3631 dbSNP
rs1212386103 3631 dbSNP
rs775985315 3633 dbSNP
rs1013609987 3635 dbSNP
rs1048177492 3637 dbSNP
rs933540644 3640 dbSNP
rs1042638974 3647 dbSNP
rs1006878903 3649 dbSNP
rs1477049366 3651 dbSNP
rs1189791965 3653 dbSNP
rs1016451067 3664 dbSNP
rs182507268 3668 dbSNP
rs186828985 3669 dbSNP
rs1197464265 3670 dbSNP
rs1193373634 3671 dbSNP
rs1250724477 3675 dbSNP
rs1054403611 3676 dbSNP
rs561541371 3680 dbSNP
rs895225637 3683 dbSNP
rs1424074118 3697 dbSNP
rs1325434721 3699 dbSNP
rs1285414327 3700 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084046. RNA binding protein: AGO2. Condition:CLIP_noarsenite_rep4 HITS-CLIP data was present in GSM1084065. RNA binding protein: AGO2. Condition:CLIP_emetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' gauucugguucggagGAAGGGa 5'
                         |||||| 
Target 5' ---------------CUUCCCa 3'
 		1 - 7
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM4903833
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_a
Location of target site NM_014484 | 3UTR | GGCUGGUCUCGAACUCCUGACCUCGUGAUCCGCCUGCCUCGACUUCCCAGAGUGCUGGGAUUACAGGCGUGAGCCACCACACCCUCCCGAGAUCUUUAAAGUUUACCAAAAUAAAGGAAACCACCUUUGUAGU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903834
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_b
Location of target site NM_014484 | 3UTR | GCUGGUCUCGAACUCCUGACCUCGUGAUCCGCCUGCCUCGACUUCCCAGAGUGCUGGGAUUACAGGCGUGAGCCACCACACCCUCCCGAGAUCUUUAAAGUUUACCAAAAUAAAGGAAACCACCUUUGUAGU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM4903835
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_c
Location of target site NM_014484 | 3UTR | UUCCCAGAGUGCUGGGAUUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM4903836
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_a
Location of target site NM_014484 | 3UTR | CGUGAUCCGCCUGCCUCGACUUCCCAGAGUGCUGGGAUUACAGGCGUGAGCCACCACACCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 5 for dataset GSM4903837
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_b
Location of target site NM_014484 | 3UTR | UUCCCAGAGUGCUGGGAUUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 6 for dataset GSM1084046
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noarsenite_rep4
Location of target site ENST00000244051.1 | 3UTR | CCCAGAGUGCUGGGAUUACAGGCGUGAGCCACCACA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 7 for dataset GSM1084065
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_emetine_AbnovaAb
Location of target site ENST00000244051.1 | 3UTR | CUUCCCAGAGUGCUGGGAUUACAGGCGUGAGCCACCA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
215 hsa-miR-4747-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT061689 BTG2 BTG anti-proliferation factor 2 2 2
MIRT062834 BCL7A BCL tumor suppressor 7A 2 2
MIRT079371 CCDC137 coiled-coil domain containing 137 2 2
MIRT081190 MIDN midnolin 2 4
MIRT081724 ZNF507 zinc finger protein 507 2 2
MIRT110565 ZMYND11 zinc finger MYND-type containing 11 2 2
MIRT133724 SKI SKI proto-oncogene 2 4
MIRT146689 MINK1 misshapen like kinase 1 2 2
MIRT150676 SLC27A1 solute carrier family 27 member 1 2 2
MIRT159196 NRBP1 nuclear receptor binding protein 1 2 2
MIRT180865 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT190659 PABPN1 poly(A) binding protein nuclear 1 2 2
MIRT196111 MPRIP myosin phosphatase Rho interacting protein 2 2
MIRT232390 SP1 Sp1 transcription factor 2 2
MIRT331070 EIF5AL1 eukaryotic translation initiation factor 5A-like 1 2 4
MIRT338632 SHMT2 serine hydroxymethyltransferase 2 2 2
MIRT407441 CTDSP1 CTD small phosphatase 1 2 2
MIRT444276 NKX6-1 NK6 homeobox 1 2 2
MIRT444834 PDE6D phosphodiesterase 6D 2 2
MIRT445452 EXT1 exostosin glycosyltransferase 1 2 2
MIRT445644 NPY4R neuropeptide Y receptor Y4 2 2
MIRT446157 RPL12 ribosomal protein L12 2 2
MIRT446608 HIP1 huntingtin interacting protein 1 2 2
MIRT447108 CLPX caseinolytic mitochondrial matrix peptidase chaperone subunit 2 2
MIRT449314 MRO maestro 2 2
MIRT450305 DRAXIN dorsal inhibitory axon guidance protein 2 2
MIRT451245 ZNF444 zinc finger protein 444 2 2
MIRT451714 OLR1 oxidized low density lipoprotein receptor 1 2 2
MIRT451908 ILK integrin linked kinase 2 2
MIRT452183 KIAA1456 KIAA1456 2 2
MIRT452610 REPIN1 replication initiator 1 2 2
MIRT453422 GLG1 golgi glycoprotein 1 2 2
MIRT454006 ALKBH5 alkB homolog 5, RNA demethylase 2 2
MIRT455072 ARHGAP39 Rho GTPase activating protein 39 2 2
MIRT455319 TTLL9 tubulin tyrosine ligase like 9 2 2
MIRT455357 KDM5C lysine demethylase 5C 2 2
MIRT455589 TAF12 TATA-box binding protein associated factor 12 2 2
MIRT455711 EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 2 2
MIRT455860 TMEM254 transmembrane protein 254 2 2
MIRT455919 RAPGEF1 Rap guanine nucleotide exchange factor 1 2 2
MIRT455946 CYP4A22 cytochrome P450 family 4 subfamily A member 22 2 2
MIRT456935 LRP10 LDL receptor related protein 10 2 2
MIRT457223 AP3D1 adaptor related protein complex 3 delta 1 subunit 2 2
MIRT457431 NOL10 nucleolar protein 10 2 2
MIRT457470 SLC35F6 solute carrier family 35 member F6 2 2
MIRT457907 ZNF212 zinc finger protein 212 2 2
MIRT458046 TSEN54 tRNA splicing endonuclease subunit 54 2 2
MIRT458073 RNLS renalase, FAD dependent amine oxidase 2 2
MIRT458234 NXPH3 neurexophilin 3 2 2
MIRT458307 TNFAIP8L3 TNF alpha induced protein 8 like 3 2 2
MIRT458378 ITM2C integral membrane protein 2C 2 2
MIRT458967 ZNF436 zinc finger protein 436 2 2
MIRT459099 CYP4A11 cytochrome P450 family 4 subfamily A member 11 2 2
MIRT459446 TMEM37 transmembrane protein 37 2 2
MIRT459671 VPS37C VPS37C, ESCRT-I subunit 2 2
MIRT460727 ASXL3 additional sex combs like 3, transcriptional regulator 2 2
MIRT460744 SRP14 signal recognition particle 14 2 2
MIRT461531 C14orf1 ergosterol biosynthesis 28 homolog 2 2
MIRT461752 DDX11 DEAD/H-box helicase 11 2 2
MIRT461837 F2RL3 F2R like thrombin or trypsin receptor 3 2 2
MIRT462019 RIF1 replication timing regulatory factor 1 2 2
MIRT462631 PHF5A PHD finger protein 5A 2 2
MIRT462772 ZNF8 zinc finger protein 8 2 2
MIRT463032 ZNF689 zinc finger protein 689 2 2
MIRT463886 WNT7B Wnt family member 7B 2 2
MIRT463995 WDTC1 WD and tetratricopeptide repeats 1 2 2
MIRT464371 URM1 ubiquitin related modifier 1 2 2
MIRT465342 TPM3 tropomyosin 3 2 4
MIRT465515 PRICKLE4 prickle planar cell polarity protein 4 2 2
MIRT465602 TNRC6A trinucleotide repeat containing 6A 2 2
MIRT465697 TNPO2 transportin 2 2 10
MIRT466988 SSRP1 structure specific recognition protein 1 2 4
MIRT467630 SLC7A5 solute carrier family 7 member 5 2 2
MIRT468132 SH3PXD2A SH3 and PX domains 2A 2 2
MIRT468322 SF3B3 splicing factor 3b subunit 3 2 2
MIRT468502 SESN2 sestrin 2 2 2
MIRT468881 RREB1 ras responsive element binding protein 1 2 2
MIRT469322 RGP1 RGP1 homolog, RAB6A GEF complex partner 1 2 2
MIRT469562 RARA retinoic acid receptor alpha 2 2
MIRT469898 PTRF caveolae associated protein 1 2 2
MIRT470045 PTGFRN prostaglandin F2 receptor inhibitor 2 2
MIRT470068 PTGES2 prostaglandin E synthase 2 2 2
MIRT470238 PRRC2A proline rich coiled-coil 2A 2 2
MIRT470390 PPP1R16B protein phosphatase 1 regulatory subunit 16B 2 2
MIRT470500 PPP1R11 protein phosphatase 1 regulatory inhibitor subunit 11 2 2
MIRT470689 POLR2D RNA polymerase II subunit D 2 2
MIRT470704 POGK pogo transposable element derived with KRAB domain 2 2
MIRT471083 PIK3C2B phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta 2 2
MIRT472482 NACC2 NACC family member 2 2 2
MIRT473583 MAT2A methionine adenosyltransferase 2A 2 2
MIRT474554 KLHDC3 kelch domain containing 3 2 2
MIRT474651 KLF13 Kruppel like factor 13 2 2
MIRT474843 KHSRP KH-type splicing regulatory protein 2 2
MIRT474934 KCTD15 potassium channel tetramerization domain containing 15 2 2
MIRT475573 HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 2 2
MIRT476045 GRSF1 G-rich RNA sequence binding factor 1 2 2
MIRT476080 GRB2 growth factor receptor bound protein 2 2 2
MIRT476440 GBA2 glucosylceramidase beta 2 2 2
MIRT476764 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 2
MIRT478785 CRTC2 CREB regulated transcription coactivator 2 2 2
MIRT479287 CHAC1 ChaC glutathione specific gamma-glutamylcyclotransferase 1 2 2
MIRT479505 CDH6 cadherin 6 2 2
MIRT479732 CCND1 cyclin D1 2 6
MIRT480352 C5orf24 chromosome 5 open reading frame 24 2 2
MIRT480407 C19orf47 chromosome 19 open reading frame 47 2 2
MIRT480859 BHLHB9 basic helix-loop-helix family member b9 2 2
MIRT481445 ARRB2 arrestin beta 2 2 2
MIRT481732 APH1A aph-1 homolog A, gamma-secretase subunit 2 2
MIRT481824 AP2M1 adaptor related protein complex 2 mu 1 subunit 2 2
MIRT482566 ABHD2 abhydrolase domain containing 2 2 2
MIRT482607 ABHD14B abhydrolase domain containing 14B 2 2
MIRT483144 SYCE1L synaptonemal complex central element protein 1 like 2 2
MIRT483214 APOA1 apolipoprotein A1 2 6
MIRT483878 TGIF1 TGFB induced factor homeobox 1 2 2
MIRT483917 SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 2 2
MIRT483939 LENG8 leukocyte receptor cluster member 8 2 4
MIRT484420 SNX19 sorting nexin 19 2 2
MIRT484489 SLC9A1 solute carrier family 9 member A1 2 2
MIRT484612 SIX3 SIX homeobox 3 2 6
MIRT484705 RNF11 ring finger protein 11 2 2
MIRT485107 SHISA6 shisa family member 6 2 2
MIRT485354 MYO1C myosin IC 2 4
MIRT485609 FOSL1 FOS like 1, AP-1 transcription factor subunit 2 4
MIRT487311 GLTSCR1 BRD4 interacting chromatin remodeling complex associated protein 2 2
MIRT487417 CACNB1 calcium voltage-gated channel auxiliary subunit beta 1 2 2
MIRT487695 CDK14 cyclin dependent kinase 14 2 2
MIRT487791 GPR20 G protein-coupled receptor 20 2 4
MIRT488042 PABPC1L2B poly(A) binding protein cytoplasmic 1 like 2B 2 2
MIRT488058 PABPC1L2A poly(A) binding protein cytoplasmic 1 like 2A 2 2
MIRT488237 DNLZ DNL-type zinc finger 2 4
MIRT488764 FXYD1 FXYD domain containing ion transport regulator 1 2 2
MIRT489401 TUBB2A tubulin beta 2A class IIa 2 2
MIRT489777 GRINA glutamate ionotropic receptor NMDA type subunit associated protein 1 2 2
MIRT490099 FN3K fructosamine 3 kinase 2 2
MIRT490290 ISL2 ISL LIM homeobox 2 2 2
MIRT490378 LHFPL3 LHFPL tetraspan subfamily member 3 2 2
MIRT491329 GFER growth factor, augmenter of liver regeneration 2 2
MIRT491435 MSX2 msh homeobox 2 2 2
MIRT491769 ZNF385A zinc finger protein 385A 2 2
MIRT491922 WNK2 WNK lysine deficient protein kinase 2 2 2
MIRT491983 UNK unkempt family zinc finger 2 2
MIRT492228 SLC48A1 solute carrier family 48 member 1 2 2
MIRT492404 SDK1 sidekick cell adhesion molecule 1 2 2
MIRT492767 PDGFB platelet derived growth factor subunit B 2 2
MIRT492966 NCS1 neuronal calcium sensor 1 2 2
MIRT493295 LLGL2 LLGL2, scribble cell polarity complex component 2 2
MIRT493650 HDLBP high density lipoprotein binding protein 2 2
MIRT493913 FAM127B retrotransposon Gag like 8A 2 4
MIRT495601 NKX2-5 NK2 homeobox 5 2 2
MIRT496875 AHCYL2 adenosylhomocysteinase like 2 2 2
MIRT498514 MYH14 myosin heavy chain 14 2 2
MIRT499178 RBPJL recombination signal binding protein for immunoglobulin kappa J region like 2 2
MIRT502143 KIF5B kinesin family member 5B 2 8
MIRT502692 CSNK1G1 casein kinase 1 gamma 1 2 4
MIRT508460 HOXB6 homeobox B6 2 4
MIRT510430 ZNF207 zinc finger protein 207 2 6
MIRT511837 GPATCH8 G-patch domain containing 8 2 4
MIRT512368 CPM carboxypeptidase M 2 2
MIRT512506 BTBD19 BTB domain containing 19 2 2
MIRT513065 ANKRD45 ankyrin repeat domain 45 2 2
MIRT513267 SCUBE1 signal peptide, CUB domain and EGF like domain containing 1 2 4
MIRT513575 EVX1 even-skipped homeobox 1 2 2
MIRT515051 EBNA1BP2 EBNA1 binding protein 2 2 2
MIRT515790 COL4A3BP collagen type IV alpha 3 binding protein 2 2
MIRT521657 PRKD3 protein kinase D3 2 2
MIRT522679 LUZP1 leucine zipper protein 1 2 6
MIRT528845 RAB32 RAB32, member RAS oncogene family 2 2
MIRT533569 TOR1AIP1 torsin 1A interacting protein 1 2 2
MIRT543738 DHCR7 7-dehydrocholesterol reductase 2 2
MIRT544295 TSPYL1 TSPY like 1 2 2
MIRT544857 MYH2 myosin heavy chain 2 2 4
MIRT557323 HIATL1 major facilitator superfamily domain containing 14B 2 4
MIRT560522 TMEM98 transmembrane protein 98 2 2
MIRT561565 SLC6A9 solute carrier family 6 member 9 2 2
MIRT562374 ERI2 ERI1 exoribonuclease family member 2 2 2
MIRT565780 SEMA6D semaphorin 6D 2 2
MIRT569548 UNC119B unc-119 lipid binding chaperone B 2 2
MIRT569944 PRRT2 proline rich transmembrane protein 2 2 2
MIRT570016 COL1A2 collagen type I alpha 2 chain 2 2
MIRT572163 CRK CRK proto-oncogene, adaptor protein 2 2
MIRT572322 HSPB6 heat shock protein family B (small) member 6 2 2
MIRT573495 IQSEC3 IQ motif and Sec7 domain 3 2 2
MIRT574139 MARVELD1 MARVEL domain containing 1 2 2
MIRT609449 CCDC149 coiled-coil domain containing 149 2 2
MIRT610619 ARHGAP18 Rho GTPase activating protein 18 2 2
MIRT623355 LZIC leucine zipper and CTNNBIP1 domain containing 2 2
MIRT629854 ACOX1 acyl-CoA oxidase 1 2 2
MIRT630516 CDC73 cell division cycle 73 2 2
MIRT632535 PSMB2 proteasome subunit beta 2 2 2
MIRT633975 SLC35E2 solute carrier family 35 member E2 2 2
MIRT636408 MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 2 2
MIRT641722 LTBR lymphotoxin beta receptor 2 2
MIRT642661 RGS6 regulator of G protein signaling 6 2 2
MIRT649649 MAST3 microtubule associated serine/threonine kinase 3 2 2
MIRT650367 MOCS3 molybdenum cofactor synthesis 3 2 2
MIRT651355 ZBTB40 zinc finger and BTB domain containing 40 2 2
MIRT664840 HUS1 HUS1 checkpoint clamp component 2 2
MIRT667322 MYH9 myosin heavy chain 9 2 2
MIRT670680 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT674922 TRPM6 transient receptor potential cation channel subfamily M member 6 2 2
MIRT675919 CYP51A1 cytochrome P450 family 51 subfamily A member 1 2 2
MIRT676493 GJD3 gap junction protein delta 3 2 2
MIRT680162 ZDHHC20 zinc finger DHHC-type containing 20 2 2
MIRT688008 GSN gelsolin 2 2
MIRT688997 ATP6AP1 ATPase H+ transporting accessory protein 1 2 2
MIRT700337 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT701344 NR4A3 nuclear receptor subfamily 4 group A member 3 2 2
MIRT703519 FKBP15 FK506 binding protein 15 2 2
MIRT703901 EPT1 selenoprotein I 2 2
MIRT705565 ARHGEF18 Rho/Rac guanine nucleotide exchange factor 18 2 2
MIRT709709 DNAJC11 DnaJ heat shock protein family (Hsp40) member C11 2 2
MIRT713108 TMBIM4 transmembrane BAX inhibitor motif containing 4 2 2
MIRT718426 ZNF85 zinc finger protein 85 2 2
MIRT719236 CYSLTR2 cysteinyl leukotriene receptor 2 2 2
MIRT719326 STAC SH3 and cysteine rich domain 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-4747 Paclitaxel 36314 NSC125973 approved resistant cell line (A2780)
hsa-miR-4747-5p Temozolomide 5394 NSC362856 approved sensitive cell line (U251)
hsa-miR-4747-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-4747-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)

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