pre-miRNA Information
pre-miRNA hsa-mir-6769b   
Genomic Coordinates chr1: 206474803 - 206474864
Description Homo sapiens miR-6769b stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6769b-3p
Sequence 42| CCCUCUCUGUCCCACCCAUAG |62
Evidence Experimental
Experiments Meta-analysis
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN26671848 9 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs555627187 3 dbSNP
rs782102173 4 dbSNP
rs201952639 7 dbSNP
rs782001154 9 dbSNP
rs1488064450 15 dbSNP
rs782111367 16 dbSNP
rs370859899 18 dbSNP
rs1305197911 19 dbSNP
Putative Targets

Gene Information
Gene Symbol VPS13D   
Synonyms -
Description vacuolar protein sorting 13 homolog D
Transcript NM_015378   
Other Transcripts NM_018156   
Expression
Putative miRNA Targets on VPS13D
3'UTR of VPS13D
(miRNA target sites are highlighted)
>VPS13D|NM_015378|3'UTR
   1 AGCCCCGCTGCTGAGATGGGCGCTCCCGACACAGCGCAGACCCACCAGGAGGAAAGAGGCCCAGCTCTCAGCTGACGATG
  81 GAGGCAGAACCGGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAGGAAAAGTACAAATGG
 161 AAATCGTATTAATTTGTGAGGCAGGGAGTTATTTTAGATTATGGGAAATAATTTTTAAAGGTATTGGTTAAATAACGTTT
 241 AAAAACATGTACTGAGATGAATCTAATTTTTAGATTGCCCTGTATTTTGTTAACATGTATATATGTACAACAGTGTGTTT
 321 GTAAATATATAGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAAGTAATATAAAGTTATA
 401 TTGGATCTTCTATTGCACTAATTCTAGATGTCTAATTCAGGATACTGTCTATAGAAAGGCATTCTTAAAAGTTAAAGAAT
 481 GTTACGTCTTAGTTTTGGAGACTAAAGTATTCCCAGTAAAGTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCT
 561 TTGACATCGTGGCTGTCCAGTTGGGCTGTGAGCTGTGGCACCCAGGACTGGCGCTGGCCCTTCAGAAGGATCTAGGAGAG
 641 GGGCTTGGGAGCCCACTTTTAATTTCTCACCCCCATTTTACAAAGAGTGCTTAGATTCTTACAAATTATGATGTAAGTTA
 721 TCCATTTGGCTTTTTCCTAACTAGTCTTACCAAACTTAGGGGGAAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGC
 801 ATTGTAAGTTTTCTCAGGTTATTATTATTAGAGAGGTTGGAAACATTGGTAAACTCTGTTGATTGAGAAGGAAAAAAAAA
 881 GTCCCATTGAACTGTTGCAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCAAGAACAAAG
 961 CCCCGGGACTGTTTTCTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACC
1041 CCAGGATGAGAAGGGAGCAGGGAGAGTTCCAGAAAGGGGGATGAAATAGGAGTATTAAAAAGCTGCGTTGGTAAGTTTTT
1121 CATGGAACCAAGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAGGCCTGGTATGAGCGCC
1201 CTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGATTAAGCAGATAGGGAGAAGGGAAAAGGGGCCTCACTTTAGAA
1281 TGAATGAGTCACCTTGTGATTTTTAAATTTTTATTTTAATAAAGCTAATCAATTTCTACAACCTTGTCACATGTAGCTGA
1361 GTCTGGGATGACTCAGTGGATCAGTGGATGCGTGGAAGGTTTTGGTGTTTATAACTCATGACCCAAATCCTTCCAAGACA
1441 CAAATGAAGCTAATCTTCTTCCCCTCCCTTTCCTCTCCCACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGT
1521 GTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAGAGGAAGGAAGGGAGCTTTAGCACAAGTAGCTACATAGTGTTCAAGG
1601 ATCAGCTTTCTTGAACTCCGAGGCTTGGTTGCCTTTGCTGAACTCCAAGTTAGTGGATTGCAGAATGGAAACTTGGCTTT
1681 TGCGGCACTGGGTGAGTTTTAGTTTGTGTGTGTCTTGCTGGGGGGTGGTGATGATTGTCTCAGCACTCACGCACTGCACA
1761 AGATGGCAGCAGGATACAGCACTGCACAAGATGGCAGCTCCTCTGCAGCTTCCTCCTCAGCCTCCCTCCTTGCACCCCCA
1841 CAGGTTTGGCTTGTGGTTTTTGTCATCAGTAACCTACTGCCTGAGATCATGATCTCTTAAAAGATGAGACTCTCGGAAGG
1921 GTTGATTGTATGCGTCAGTGAGCCTTCTATCACCTTCTGGAACAAAGTCACTTGAAATCTCTTGATGAGATTAAGGAGTT
2001 TAGTGTTACTAAGAAAATCTGCTTTGGGCCGCAGCAGTGCTGGGTGTTCTCAGACCTGACTGAGGAAGTTAGCTGCGGGC
2081 TGCCCTGTGGGCTGGTGCTTCAGGAGGAATCCAGAGAAGTGTTCAGATGCCCCCCTTGGGCTCCTTTCTAATTTTAATCA
2161 GCTCTTTAAATAGCTGCCCATCTCCTGTGATTGCACAACCAAGCACTTTGACATTTGCACCTTAGGAGAGGCAGATGTTA
2241 AAATGGAATCCAAAGACCACCTAGGGCGGGGCTGGGTGGGAGATGGGAGGGCCAACTGCGAGCTGCTCCACTTCTCAGCT
2321 CTCCCCTGCCCTGCAGCCCTGGGCCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCACCAG
2401 GAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCA
2481 GCCAGCAATGCCTAAGACTTTGTTAAGATCATTTCTACTGCTTTTCTTTCTGCTTCAAACACACAGTTCGTCTCTGAGGA
2561 AAGTAAAATAAATGGAATAAGAGTAAATTGGGTAAGGAGATATCCAAAGCTACCCAGTCCCTTGACCCAGCACAGTTGGC
2641 CGACCCGTGTCACTCCCTGGCTGTCGCTGCTTCTCTGTGCTCACTGAAGGGTGAGCCAGGCCAGTGCTTCCCCAGCCCCT
2721 GGGCCTGGTCACTACACAGTGGAAAACAGACAAGCGGCCCCTTCCCCAAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTG
2801 CTCATCGCAATGTTCTGAAGGCTCCAGGGCCACTTTGTTTGTAAGTATGATCTGGGCCTCAAAATACCATAGTAGCTGCT
2881 TGATAAAATTCTAAAAATATCTGGTTCTCTATTATGTAAACACTATTACAGTCACCAGTGTGTGAAGACTCTTGAGTCTG
2961 GTTCTCATATCAGAGTCATCATTTTTCTTCCTGTGGAATAAAATGCCTTGTGGACTTCCCAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' gauaCCCAC-CCUGUCUCUCCc 5'
              | |||   :|||||||| 
Target 5' gcgcGCGTGCATGCAGAGAGGa 3'
1537 - 1558 149.00 -14.90
2
miRNA  3' gauacccacccuGUCUCUCCc 5'
                      :||||||| 
Target 5' ggttattattatTAGAGAGGt 3'
817 - 837 141.00 -10.30
3
miRNA  3' gauACCCACCCUGU-CUCUCCc 5'
             ||||||||| | |:|||| 
Target 5' ggcTGGGTGGGAGATGGGAGGg 3'
2270 - 2291 134.00 -31.00
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30499971 8 COSMIC
COSN28192722 11 COSMIC
COSN28192721 12 COSMIC
COSN27004688 22 COSMIC
COSN13461864 23 COSMIC
COSN30518841 23 COSMIC
COSN30116389 50 COSMIC
COSN30143342 56 COSMIC
COSN30463006 57 COSMIC
COSN20801155 70 COSMIC
COSN30512988 88 COSMIC
COSN27004682 92 COSMIC
COSN31591931 98 COSMIC
COSN30699655 99 COSMIC
COSN31576356 135 COSMIC
COSN31519657 174 COSMIC
COSN26548495 198 COSMIC
COSN1088156 267 COSMIC
COSN31526500 420 COSMIC
COSN24571033 497 COSMIC
COSN8890041 927 COSMIC
COSN16741433 1080 COSMIC
COSN21794751 1091 COSMIC
COSN5865549 1181 COSMIC
COSN25263131 1399 COSMIC
COSN6401099 1533 COSMIC
COSN7174671 1535 COSMIC
COSN24645424 2220 COSMIC
COSN9023416 2295 COSMIC
COSN1404023 2586 COSMIC
COSN17362025 2590 COSMIC
COSN17361681 2592 COSMIC
COSN17361885 2593 COSMIC
COSN7174673 2910 COSMIC
COSN28158449 2998 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs566023561 3 dbSNP
rs746967781 7 dbSNP
rs757788387 8 dbSNP
rs780756331 9 dbSNP
rs534807598 12 dbSNP
rs78839159 13 dbSNP
rs1451682790 20 dbSNP
rs568328784 22 dbSNP
rs201021884 23 dbSNP
rs772456053 26 dbSNP
rs773515964 27 dbSNP
rs761176833 28 dbSNP
rs766869034 29 dbSNP
rs1444547733 34 dbSNP
rs776830014 36 dbSNP
rs920079885 37 dbSNP
rs369409458 38 dbSNP
rs201534589 52 dbSNP
rs577167219 55 dbSNP
rs1000913040 58 dbSNP
rs1184777034 60 dbSNP
rs896492276 61 dbSNP
rs760379030 69 dbSNP
rs949375610 73 dbSNP
rs758571876 77 dbSNP
rs902466744 78 dbSNP
rs1450100810 87 dbSNP
rs190698094 92 dbSNP
rs964780986 93 dbSNP
rs1352248330 94 dbSNP
rs1032202713 98 dbSNP
rs1439422565 99 dbSNP
rs1312066201 101 dbSNP
rs139204686 106 dbSNP
rs976310832 107 dbSNP
rs1295709222 115 dbSNP
rs1341829415 126 dbSNP
rs1425843335 127 dbSNP
rs923430369 129 dbSNP
rs996344139 138 dbSNP
rs1162191459 139 dbSNP
rs1254814880 143 dbSNP
rs1423907739 156 dbSNP
rs371000375 159 dbSNP
rs558277707 160 dbSNP
rs1448567884 167 dbSNP
rs571964084 167 dbSNP
rs1168974571 172 dbSNP
rs1392802629 176 dbSNP
rs1356112094 177 dbSNP
rs1464455649 181 dbSNP
rs1329057709 182 dbSNP
rs1375664910 183 dbSNP
rs879073363 186 dbSNP
rs747237325 206 dbSNP
rs1402941230 220 dbSNP
rs1471720087 224 dbSNP
rs558983918 226 dbSNP
rs961634124 236 dbSNP
rs942045392 237 dbSNP
rs974276941 238 dbSNP
rs1383508201 247 dbSNP
rs1300247534 248 dbSNP
rs1310857097 268 dbSNP
rs768529461 272 dbSNP
rs76233228 278 dbSNP
rs1264944964 280 dbSNP
rs1061030 281 dbSNP
rs1056252916 290 dbSNP
rs896312801 294 dbSNP
rs1197803131 296 dbSNP
rs1421339507 296 dbSNP
rs1009324781 297 dbSNP
rs991315314 300 dbSNP
rs1457459908 304 dbSNP
rs1378141690 310 dbSNP
rs918048037 316 dbSNP
rs949492995 320 dbSNP
rs1318609497 321 dbSNP
rs529800974 322 dbSNP
rs543686716 329 dbSNP
rs149546990 330 dbSNP
rs182479372 334 dbSNP
rs1053676524 337 dbSNP
rs1017678947 338 dbSNP
rs1349793322 343 dbSNP
rs1302488577 348 dbSNP
rs537338974 351 dbSNP
rs1366226916 353 dbSNP
rs995982806 370 dbSNP
rs1030575172 373 dbSNP
rs1399174168 392 dbSNP
rs778023401 398 dbSNP
rs1243503324 399 dbSNP
rs1487346437 400 dbSNP
rs1190406424 403 dbSNP
rs1463719237 413 dbSNP
rs1338468903 417 dbSNP
rs1267873088 425 dbSNP
rs1481366107 431 dbSNP
rs552397822 436 dbSNP
rs576266373 442 dbSNP
rs549049772 447 dbSNP
rs1411283761 448 dbSNP
rs890243798 453 dbSNP
rs371513419 460 dbSNP
rs1294465136 468 dbSNP
rs879211886 469 dbSNP
rs1395419107 470 dbSNP
rs7520534 481 dbSNP
rs1328109914 486 dbSNP
rs537039175 487 dbSNP
rs980167881 489 dbSNP
rs1349273730 501 dbSNP
rs927269085 512 dbSNP
rs1278916585 517 dbSNP
rs1317585480 523 dbSNP
rs1319542123 541 dbSNP
rs1220439065 543 dbSNP
rs1196922766 552 dbSNP
rs72869537 557 dbSNP
rs974309519 558 dbSNP
rs567552917 560 dbSNP
rs1027204648 565 dbSNP
rs913292668 566 dbSNP
rs1430802102 568 dbSNP
rs959887526 569 dbSNP
rs991038205 570 dbSNP
rs1165788864 572 dbSNP
rs1422209787 596 dbSNP
rs147217824 598 dbSNP
rs970861458 603 dbSNP
rs1371712183 604 dbSNP
rs1445065348 605 dbSNP
rs1280767083 612 dbSNP
rs759218897 613 dbSNP
rs553218037 614 dbSNP
rs1042167934 616 dbSNP
rs760016269 619 dbSNP
rs557173140 622 dbSNP
rs936619983 628 dbSNP
rs1053708138 633 dbSNP
rs1387133577 634 dbSNP
rs34458410 639 dbSNP
rs1038720015 645 dbSNP
rs1382699930 665 dbSNP
rs1235766774 670 dbSNP
rs1472522148 688 dbSNP
rs900153394 699 dbSNP
rs1387318420 703 dbSNP
rs9783054 712 dbSNP
rs1030089031 714 dbSNP
rs931885446 718 dbSNP
rs1339880283 747 dbSNP
rs1217056394 749 dbSNP
rs539747754 750 dbSNP
rs539967486 752 dbSNP
rs1491325725 758 dbSNP
rs1491373345 759 dbSNP
rs1312963410 760 dbSNP
rs140533953 763 dbSNP
rs1254612349 764 dbSNP
rs1296557520 766 dbSNP
rs1339866210 770 dbSNP
rs1487142985 774 dbSNP
rs1206166938 781 dbSNP
rs1216206645 783 dbSNP
rs1261879531 785 dbSNP
rs571964644 786 dbSNP
rs1004608693 789 dbSNP
rs370166617 790 dbSNP
rs1441846235 792 dbSNP
rs117325312 796 dbSNP
rs1429610322 800 dbSNP
rs554600038 802 dbSNP
rs1188215528 805 dbSNP
rs187126559 825 dbSNP
rs1287538194 833 dbSNP
rs144375933 844 dbSNP
rs1425071110 851 dbSNP
rs1415598745 854 dbSNP
rs147699554 861 dbSNP
rs1407707554 863 dbSNP
rs1432386343 872 dbSNP
rs992747550 872 dbSNP
rs913325285 873 dbSNP
rs190286491 877 dbSNP
rs755224938 883 dbSNP
rs1272925938 886 dbSNP
rs1398269915 891 dbSNP
rs1305027919 897 dbSNP
rs1344202194 901 dbSNP
rs1012893545 903 dbSNP
rs1315219426 919 dbSNP
rs545794358 922 dbSNP
rs781605634 929 dbSNP
rs1208296257 937 dbSNP
rs1262717136 940 dbSNP
rs1025157821 947 dbSNP
rs777932683 953 dbSNP
rs747952577 958 dbSNP
rs182860792 962 dbSNP
rs1039376935 963 dbSNP
rs528352388 965 dbSNP
rs923980181 966 dbSNP
rs776547881 974 dbSNP
rs13028 977 dbSNP
rs753937475 993 dbSNP
rs958108456 995 dbSNP
rs989532826 998 dbSNP
rs188459846 1000 dbSNP
rs1051421601 1005 dbSNP
rs555421506 1007 dbSNP
rs1241537157 1008 dbSNP
rs931943561 1010 dbSNP
rs1285996350 1019 dbSNP
rs1052094005 1020 dbSNP
rs1405442170 1027 dbSNP
rs148731497 1033 dbSNP
rs899345070 1041 dbSNP
rs1224159735 1064 dbSNP
rs1001689741 1082 dbSNP
rs1353081839 1091 dbSNP
rs1208326397 1092 dbSNP
rs940495045 1095 dbSNP
rs1490621632 1096 dbSNP
rs1202151099 1100 dbSNP
rs1250253807 1107 dbSNP
rs1036073229 1108 dbSNP
rs1472589669 1112 dbSNP
rs575382391 1123 dbSNP
rs75727233 1126 dbSNP
rs142277469 1141 dbSNP
rs777511713 1146 dbSNP
rs1470942498 1147 dbSNP
rs74324818 1148 dbSNP
rs80116900 1149 dbSNP
rs1425083951 1152 dbSNP
rs1304812729 1157 dbSNP
rs1157795064 1172 dbSNP
rs151259562 1178 dbSNP
rs999737054 1179 dbSNP
rs867736689 1183 dbSNP
rs745432405 1188 dbSNP
rs1165560621 1196 dbSNP
rs926029801 1198 dbSNP
rs958139479 1199 dbSNP
rs1225181065 1202 dbSNP
rs989954621 1204 dbSNP
rs1029014240 1219 dbSNP
rs953474904 1223 dbSNP
rs541193420 1224 dbSNP
rs933223137 1225 dbSNP
rs542488110 1226 dbSNP
rs1439072966 1228 dbSNP
rs1184870063 1237 dbSNP
rs1384235687 1248 dbSNP
rs1448039393 1249 dbSNP
rs1308990287 1259 dbSNP
rs193218958 1267 dbSNP
rs911771390 1274 dbSNP
rs779961684 1283 dbSNP
rs1461379660 1285 dbSNP
rs1298713164 1293 dbSNP
rs1394379741 1300 dbSNP
rs746757160 1300 dbSNP
rs1289978304 1301 dbSNP
rs971900635 1304 dbSNP
rs940311944 1320 dbSNP
rs1037876873 1321 dbSNP
rs898873224 1333 dbSNP
rs920408928 1340 dbSNP
rs1002115758 1343 dbSNP
rs1253596886 1344 dbSNP
rs1055957917 1351 dbSNP
rs930412541 1352 dbSNP
rs762073420 1362 dbSNP
rs1252742713 1364 dbSNP
rs1055921173 1391 dbSNP
rs1413572140 1392 dbSNP
rs765650293 1393 dbSNP
rs554612278 1400 dbSNP
rs1374712280 1405 dbSNP
rs1406442304 1413 dbSNP
rs949711064 1414 dbSNP
rs1045398159 1415 dbSNP
rs1175762252 1419 dbSNP
rs906821162 1423 dbSNP
rs999768249 1424 dbSNP
rs1031200327 1433 dbSNP
rs532844800 1434 dbSNP
rs574436432 1444 dbSNP
rs1318819119 1445 dbSNP
rs967364043 1453 dbSNP
rs1000129198 1454 dbSNP
rs893957007 1462 dbSNP
rs1165973218 1463 dbSNP
rs3737609 1469 dbSNP
rs964153469 1479 dbSNP
rs1029459131 1480 dbSNP
rs1162736723 1482 dbSNP
rs1323668343 1488 dbSNP
rs1356568297 1488 dbSNP
rs1466326674 1492 dbSNP
rs953407858 1494 dbSNP
rs1205100539 1496 dbSNP
rs1265870860 1496 dbSNP
rs1485374405 1496 dbSNP
rs1186884353 1498 dbSNP
rs1331116623 1498 dbSNP
rs1398475391 1500 dbSNP
rs1156993701 1502 dbSNP
rs1198628572 1502 dbSNP
rs1216123502 1502 dbSNP
rs1224804461 1502 dbSNP
rs1262220797 1502 dbSNP
rs1284491836 1502 dbSNP
rs1285988094 1502 dbSNP
rs1315928906 1502 dbSNP
rs1407383104 1502 dbSNP
rs1487399797 1502 dbSNP
rs200052428 1502 dbSNP
rs386353816 1502 dbSNP
rs1221564447 1504 dbSNP
rs1269534868 1504 dbSNP
rs145219677 1506 dbSNP
rs1180096714 1507 dbSNP
rs1018888545 1508 dbSNP
rs1285349905 1508 dbSNP
rs369008388 1510 dbSNP
rs1379040598 1513 dbSNP
rs1226183629 1521 dbSNP
rs1297081476 1522 dbSNP
rs1161599280 1523 dbSNP
rs1348436289 1523 dbSNP
rs1304194691 1525 dbSNP
rs1318169338 1527 dbSNP
rs1197539803 1528 dbSNP
rs961958297 1528 dbSNP
rs1308700541 1529 dbSNP
rs1319636756 1529 dbSNP
rs1372009252 1529 dbSNP
rs971931560 1529 dbSNP
rs1292308839 1530 dbSNP
rs920440009 1530 dbSNP
rs1491503722 1531 dbSNP
rs748640775 1531 dbSNP
rs987401131 1531 dbSNP
rs991838982 1531 dbSNP
rs397731722 1532 dbSNP
rs563288112 1533 dbSNP
rs915682658 1534 dbSNP
rs556983792 1535 dbSNP
rs1315441758 1536 dbSNP
rs576848440 1536 dbSNP
rs902835053 1537 dbSNP
rs935589528 1538 dbSNP
rs1052660178 1539 dbSNP
rs940344040 1540 dbSNP
rs1037334054 1541 dbSNP
rs1235847427 1541 dbSNP
rs546006027 1542 dbSNP
rs1245311053 1543 dbSNP
rs1491483652 1543 dbSNP
rs185494534 1543 dbSNP
rs144446133 1544 dbSNP
rs937102488 1544 dbSNP
rs189156818 1545 dbSNP
rs1451416387 1546 dbSNP
rs541681502 1548 dbSNP
rs746563425 1549 dbSNP
rs776360044 1549 dbSNP
rs1384654005 1558 dbSNP
rs763535261 1562 dbSNP
rs1421964283 1568 dbSNP
rs895974617 1570 dbSNP
rs1362537278 1582 dbSNP
rs1216308882 1586 dbSNP
rs1261283935 1593 dbSNP
rs1322957765 1606 dbSNP
rs1204475260 1613 dbSNP
rs1265245431 1620 dbSNP
rs1192912575 1621 dbSNP
rs1471182816 1631 dbSNP
rs1335268954 1645 dbSNP
rs1014346304 1646 dbSNP
rs561751257 1648 dbSNP
rs1446389834 1649 dbSNP
rs796302198 1650 dbSNP
rs1468849301 1663 dbSNP
rs1176603650 1667 dbSNP
rs903406816 1669 dbSNP
rs961989179 1684 dbSNP
rs1398636578 1685 dbSNP
rs993382082 1722 dbSNP
rs1275962336 1723 dbSNP
rs1033012260 1732 dbSNP
rs866910706 1732 dbSNP
rs951992762 1740 dbSNP
rs991763412 1743 dbSNP
rs915736242 1745 dbSNP
rs947250066 1751 dbSNP
rs971580608 1751 dbSNP
rs1029725093 1752 dbSNP
rs530786702 1755 dbSNP
rs1285347606 1757 dbSNP
rs530472936 1764 dbSNP
rs1204821910 1765 dbSNP
rs868637481 1771 dbSNP
rs981166269 1773 dbSNP
rs987265710 1779 dbSNP
rs1268786495 1784 dbSNP
rs766840017 1787 dbSNP
rs1219662278 1788 dbSNP
rs1277644235 1801 dbSNP
rs1430855895 1802 dbSNP
rs1468239528 1807 dbSNP
rs1157666948 1813 dbSNP
rs1440643992 1815 dbSNP
rs924287750 1816 dbSNP
rs751653661 1826 dbSNP
rs1301123271 1832 dbSNP
rs1217780622 1834 dbSNP
rs140445914 1835 dbSNP
rs1488631472 1841 dbSNP
rs1305006642 1846 dbSNP
rs1192998446 1850 dbSNP
rs915519108 1851 dbSNP
rs1238547119 1861 dbSNP
rs3737610 1887 dbSNP
rs973515651 1890 dbSNP
rs946981544 1891 dbSNP
rs1490650355 1892 dbSNP
rs920253858 1899 dbSNP
rs1051056765 1907 dbSNP
rs371836739 1913 dbSNP
rs1173536413 1915 dbSNP
rs1009408762 1916 dbSNP
rs564640352 1928 dbSNP
rs1441232873 1930 dbSNP
rs1161407269 1933 dbSNP
rs1384430647 1934 dbSNP
rs1160921938 1935 dbSNP
rs1361706606 1941 dbSNP
rs916973483 1942 dbSNP
rs897830815 1943 dbSNP
rs191257988 1950 dbSNP
rs1041860562 1954 dbSNP
rs1027602383 1955 dbSNP
rs528272172 1966 dbSNP
rs1337726295 1971 dbSNP
rs1450789287 1975 dbSNP
rs952086673 1980 dbSNP
rs1360657731 1986 dbSNP
rs1012820511 1988 dbSNP
rs1250141817 1994 dbSNP
rs936248989 1999 dbSNP
rs1194732647 2002 dbSNP
rs1274037059 2010 dbSNP
rs1342568041 2012 dbSNP
rs1225418208 2014 dbSNP
rs1458797093 2019 dbSNP
rs1023240384 2031 dbSNP
rs547210902 2032 dbSNP
rs981197222 2034 dbSNP
rs1054894377 2047 dbSNP
rs374232078 2049 dbSNP
rs1461460641 2055 dbSNP
rs755175642 2065 dbSNP
rs997231556 2069 dbSNP
rs989849536 2076 dbSNP
rs767838689 2077 dbSNP
rs914223596 2078 dbSNP
rs1008771704 2080 dbSNP
rs1453542475 2083 dbSNP
rs1246479893 2084 dbSNP
rs1014765708 2087 dbSNP
rs1199801972 2095 dbSNP
rs946977009 2096 dbSNP
rs1319419736 2112 dbSNP
rs962295330 2115 dbSNP
rs566908862 2116 dbSNP
rs1461546542 2128 dbSNP
rs973331729 2134 dbSNP
rs752979579 2142 dbSNP
rs1427800224 2151 dbSNP
rs1180864756 2153 dbSNP
rs1425786175 2176 dbSNP
rs755796522 2178 dbSNP
rs1419616246 2180 dbSNP
rs1156320441 2181 dbSNP
rs565377453 2185 dbSNP
rs183756241 2186 dbSNP
rs1467811022 2188 dbSNP
rs910717625 2197 dbSNP
rs113717809 2199 dbSNP
rs1392181872 2200 dbSNP
rs1287462681 2204 dbSNP
rs1384724826 2206 dbSNP
rs777657073 2211 dbSNP
rs1040515795 2215 dbSNP
rs897946390 2222 dbSNP
rs1234702000 2236 dbSNP
rs993527763 2254 dbSNP
rs146724928 2268 dbSNP
rs188379454 2268 dbSNP
rs1221152849 2269 dbSNP
rs1282136664 2277 dbSNP
rs1323782456 2281 dbSNP
rs1211832071 2287 dbSNP
rs1258696854 2288 dbSNP
rs567411378 2291 dbSNP
rs1013264739 2292 dbSNP
rs181272140 2300 dbSNP
rs537077718 2301 dbSNP
rs1198747213 2311 dbSNP
rs1430134113 2318 dbSNP
rs1435078190 2321 dbSNP
rs778862970 2322 dbSNP
rs556661196 2324 dbSNP
rs1363511893 2325 dbSNP
rs949800834 2330 dbSNP
rs1002747732 2333 dbSNP
rs878917888 2341 dbSNP
rs1300493432 2342 dbSNP
rs977581759 2349 dbSNP
rs745381547 2350 dbSNP
rs1444196954 2357 dbSNP
rs576916874 2360 dbSNP
rs1404935939 2361 dbSNP
rs1301940923 2367 dbSNP
rs1031501011 2369 dbSNP
rs955803645 2370 dbSNP
rs1220529549 2371 dbSNP
rs924768340 2372 dbSNP
rs771632795 2381 dbSNP
rs76202855 2385 dbSNP
rs1287943840 2398 dbSNP
rs1489832912 2399 dbSNP
rs1358498949 2407 dbSNP
rs1210484465 2421 dbSNP
rs900042174 2422 dbSNP
rs1021721797 2428 dbSNP
rs1489506133 2438 dbSNP
rs1175641287 2440 dbSNP
rs1450080403 2441 dbSNP
rs1200982027 2454 dbSNP
rs1419943798 2458 dbSNP
rs1160804797 2468 dbSNP
rs1383806063 2474 dbSNP
rs779627573 2475 dbSNP
rs932673996 2479 dbSNP
rs1051089658 2489 dbSNP
rs986790535 2497 dbSNP
rs1164778009 2499 dbSNP
rs1239109922 2500 dbSNP
rs1437972713 2504 dbSNP
rs1296015490 2512 dbSNP
rs1372118725 2522 dbSNP
rs370520796 2532 dbSNP
rs910842582 2533 dbSNP
rs1447123828 2539 dbSNP
rs891257905 2543 dbSNP
rs1357048447 2549 dbSNP
rs879209635 2550 dbSNP
rs41279472 2551 dbSNP
rs1323488269 2559 dbSNP
rs1202518191 2563 dbSNP
rs79726445 2564 dbSNP
rs72869539 2569 dbSNP
rs1472870622 2572 dbSNP
rs555210710 2574 dbSNP
rs929413068 2581 dbSNP
rs770002047 2582 dbSNP
rs41279474 2584 dbSNP
rs887784529 2590 dbSNP
rs948711066 2592 dbSNP
rs1044790356 2593 dbSNP
rs1388202497 2595 dbSNP
rs1466807308 2598 dbSNP
rs907153471 2611 dbSNP
rs977152993 2622 dbSNP
rs1465782598 2632 dbSNP
rs1002779113 2633 dbSNP
rs763262914 2637 dbSNP
rs1380225547 2642 dbSNP
rs1451625399 2643 dbSNP
rs771560786 2648 dbSNP
rs1284632057 2649 dbSNP
rs1331791784 2650 dbSNP
rs1212759922 2657 dbSNP
rs544229294 2666 dbSNP
rs1011748033 2673 dbSNP
rs924330972 2674 dbSNP
rs1200695399 2676 dbSNP
rs1399219732 2697 dbSNP
rs1261483906 2706 dbSNP
rs1461092590 2709 dbSNP
rs957562185 2710 dbSNP
rs990687202 2713 dbSNP
rs921561706 2716 dbSNP
rs1418082484 2719 dbSNP
rs570393439 2729 dbSNP
rs932896356 2730 dbSNP
rs1314828378 2731 dbSNP
rs1021334784 2738 dbSNP
rs1051121183 2740 dbSNP
rs1469003031 2742 dbSNP
rs1334510924 2747 dbSNP
rs1360717618 2748 dbSNP
rs1340958829 2756 dbSNP
rs1245696573 2757 dbSNP
rs1341121447 2759 dbSNP
rs1220540281 2775 dbSNP
rs953923939 2780 dbSNP
rs1281502941 2781 dbSNP
rs985175917 2787 dbSNP
rs912556562 2803 dbSNP
rs1281118091 2807 dbSNP
rs939976786 2808 dbSNP
rs146632051 2810 dbSNP
rs185152840 2825 dbSNP
rs1195171028 2827 dbSNP
rs1426624566 2829 dbSNP
rs558329779 2834 dbSNP
rs1049360777 2836 dbSNP
rs1426941878 2837 dbSNP
rs1398725569 2850 dbSNP
rs1317461253 2856 dbSNP
rs1361056040 2864 dbSNP
rs894415560 2868 dbSNP
rs1012772375 2870 dbSNP
rs976284125 2898 dbSNP
rs919441842 2900 dbSNP
rs929444028 2906 dbSNP
rs1258928178 2909 dbSNP
rs1348875883 2912 dbSNP
rs971054500 2916 dbSNP
rs41279476 2919 dbSNP
rs1031425929 2925 dbSNP
rs1220945996 2926 dbSNP
rs909338497 2928 dbSNP
rs1450557327 2934 dbSNP
rs990375534 2940 dbSNP
rs948809223 2941 dbSNP
rs921416523 2951 dbSNP
rs1248090814 2955 dbSNP
rs1468318282 2956 dbSNP
rs1157761572 2965 dbSNP
rs1366130763 2967 dbSNP
rs954307636 2968 dbSNP
rs987065834 2975 dbSNP
rs1044431587 2978 dbSNP
rs1364976663 2980 dbSNP
rs907184579 2982 dbSNP
rs1170886719 2987 dbSNP
rs1325686111 2991 dbSNP
rs767707686 2993 dbSNP
rs1441814344 2998 dbSNP
rs940006536 3001 dbSNP
rs1379582434 3007 dbSNP
rs1463904254 3010 dbSNP
rs1052990407 3011 dbSNP
rs1304362899 3016 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084065. RNA binding protein: AGO2. Condition:CLIP_emetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gauacccacccUGUCUCUCCc 5'
                     :|||||||| 
Target 5' ----------uGCAGAGAGGa 3'
1 - 11
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084065
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_emetine_AbnovaAb
Location of target site ENST00000358136.3 | 3UTR | UGCAGAGAGGAAGGAAGGGAGCUUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
209 hsa-miR-6769b-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT181753 UHMK1 U2AF homology motif kinase 1 2 2
MIRT287119 SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 2 2
MIRT395372 CDC42EP4 CDC42 effector protein 4 2 4
MIRT472533 NACC1 nucleus accumbens associated 1 2 4
MIRT472611 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 2 2
MIRT482405 ADRB1 adrenoceptor beta 1 2 10
MIRT492330 SETD1B SET domain containing 1B 2 2
MIRT499238 VAV3 vav guanine nucleotide exchange factor 3 2 6
MIRT512274 ARHGDIA Rho GDP dissociation inhibitor alpha 2 6
MIRT534548 RUNX1 runt related transcription factor 1 2 2
MIRT535374 PEX5L peroxisomal biogenesis factor 5 like 2 2
MIRT535424 PDZD8 PDZ domain containing 8 2 2
MIRT539329 AHSA2 activator of HSP90 ATPase homolog 2 2 4
MIRT569350 EFHC1 EF-hand domain containing 1 2 2
MIRT576116 Klf6 Kruppel-like factor 6 2 2
MIRT607241 LINS lines homolog 1 2 4
MIRT607364 ASAH2 N-acylsphingosine amidohydrolase 2 2 4
MIRT609572 CATSPER4 cation channel sperm associated 4 2 2
MIRT610045 SERPINA3 serpin family A member 3 2 2
MIRT610284 PLCXD3 phosphatidylinositol specific phospholipase C X domain containing 3 2 2
MIRT610302 KLHL21 kelch like family member 21 2 2
MIRT610393 FOXE1 forkhead box E1 2 2
MIRT610432 ASAH2B N-acylsphingosine amidohydrolase 2B 2 2
MIRT610510 BARHL2 BarH like homeobox 2 2 2
MIRT611818 FCRL4 Fc receptor like 4 2 2
MIRT612755 MYOCD myocardin 2 2
MIRT613698 QPRT quinolinate phosphoribosyltransferase 2 2
MIRT613917 POU3F1 POU class 3 homeobox 1 2 2
MIRT615153 URGCP-MRPS24 URGCP-MRPS24 readthrough 2 2
MIRT615201 CLUAP1 clusterin associated protein 1 2 2
MIRT615338 ABCC12 ATP binding cassette subfamily C member 12 2 2
MIRT616706 UBXN2A UBX domain protein 2A 2 2
MIRT617186 GOSR2 golgi SNAP receptor complex member 2 2 4
MIRT617526 SORCS2 sortilin related VPS10 domain containing receptor 2 2 2
MIRT617596 NUDT5 nudix hydrolase 5 2 4
MIRT617763 C17orf105 chromosome 17 open reading frame 105 2 2
MIRT618613 SHOX short stature homeobox 2 2
MIRT619301 FAM26E calcium homeostasis modulator family member 5 2 2
MIRT619515 TXLNB taxilin beta 2 2
MIRT619925 NLRP9 NLR family pyrin domain containing 9 2 2
MIRT619942 C8orf33 chromosome 8 open reading frame 33 2 2
MIRT620025 NFAM1 NFAT activating protein with ITAM motif 1 2 2
MIRT620554 C10orf10 chromosome 10 open reading frame 10 2 4
MIRT620752 CCR5 C-C motif chemokine receptor 5 (gene/pseudogene) 2 2
MIRT621798 TMEM233 transmembrane protein 233 2 2
MIRT621843 TGFBR3 transforming growth factor beta receptor 3 2 2
MIRT622693 PLSCR1 phospholipid scramblase 1 2 2
MIRT622733 PITPNM3 PITPNM family member 3 2 2
MIRT623004 ONECUT3 one cut homeobox 3 2 2
MIRT623211 MTFR1L mitochondrial fission regulator 1 like 2 2
MIRT623771 GPR37L1 G protein-coupled receptor 37 like 1 2 2
MIRT624119 DNAH10OS dynein axonemal heavy chain 10 opposite strand 2 2
MIRT624150 DIAPH1 diaphanous related formin 1 2 2
MIRT624443 CAMK2N1 calcium/calmodulin dependent protein kinase II inhibitor 1 2 2
MIRT624855 ABI2 abl interactor 2 2 2
MIRT625311 SHISA6 shisa family member 6 2 2
MIRT625741 MTSS1 MTSS1, I-BAR domain containing 2 2
MIRT626292 ZNF85 zinc finger protein 85 2 2
MIRT627400 TMEM170A transmembrane protein 170A 2 2
MIRT627464 SYNRG synergin gamma 2 2
MIRT627913 KANSL1 KAT8 regulatory NSL complex subunit 1 2 2
MIRT636508 GDAP1L1 ganglioside induced differentiation associated protein 1 like 1 2 2
MIRT636910 KIAA0408 KIAA0408 2 2
MIRT637302 ACTN2 actinin alpha 2 2 2
MIRT638230 SOGA3 SOGA family member 3 2 2
MIRT639880 STC1 stanniocalcin 1 2 2
MIRT639999 PHF21B PHD finger protein 21B 2 2
MIRT640149 CEP104 centrosomal protein 104 2 2
MIRT640699 SKI SKI proto-oncogene 2 2
MIRT640911 RAB13 RAB13, member RAS oncogene family 2 2
MIRT641518 CREBBP CREB binding protein 2 2
MIRT641990 OXSR1 oxidative stress responsive 1 2 2
MIRT642635 EPPIN epididymal peptidase inhibitor 2 2
MIRT642744 TDRD6 tudor domain containing 6 2 2
MIRT642759 SDHAF2 succinate dehydrogenase complex assembly factor 2 2 2
MIRT642787 CHCHD3 coiled-coil-helix-coiled-coil-helix domain containing 3 2 2
MIRT643054 EPPIN-WFDC6 EPPIN-WFDC6 readthrough 2 2
MIRT643104 NDUFB5 NADH:ubiquinone oxidoreductase subunit B5 2 2
MIRT643316 TMEM151B transmembrane protein 151B 2 2
MIRT643715 ITK IL2 inducible T-cell kinase 2 2
MIRT644087 A4GALT alpha 1,4-galactosyltransferase (P blood group) 2 2
MIRT644112 SEL1L3 SEL1L family member 3 2 2
MIRT644377 ZNF286A zinc finger protein 286A 2 2
MIRT644408 FRMD6 FERM domain containing 6 2 2
MIRT644684 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT644744 CCDC174 coiled-coil domain containing 174 2 2
MIRT644876 C2orf48 chromosome 2 open reading frame 48 2 2
MIRT645417 FAM110A family with sequence similarity 110 member A 2 2
MIRT645928 PLXNA3 plexin A3 2 2
MIRT646181 PTPN14 protein tyrosine phosphatase, non-receptor type 14 2 2
MIRT646554 TMCC2 transmembrane and coiled-coil domain family 2 2 2
MIRT647235 OR6A2 olfactory receptor family 6 subfamily A member 2 2 2
MIRT647263 PTGDR2 prostaglandin D2 receptor 2 2 2
MIRT647660 FOXL1 forkhead box L1 2 2
MIRT648284 TRAPPC2L trafficking protein particle complex 2 like 2 2
MIRT648493 CMBL carboxymethylenebutenolidase homolog 2 2
MIRT648963 TMEM45B transmembrane protein 45B 2 2
MIRT649511 RAB17 RAB17, member RAS oncogene family 2 2
MIRT650446 CPXM2 carboxypeptidase X, M14 family member 2 2 2
MIRT650712 KRT32 keratin 32 2 2
MIRT651069 ZNF518B zinc finger protein 518B 2 4
MIRT651090 ZNF516 zinc finger protein 516 2 2
MIRT651193 ZNF281 zinc finger protein 281 2 2
MIRT651330 ZCCHC2 zinc finger CCHC-type containing 2 2 2
MIRT651445 XKR4 XK related 4 2 2
MIRT651517 WNT4 Wnt family member 4 2 4
MIRT651694 VPS13D vacuolar protein sorting 13 homolog D 2 2
MIRT652173 TRIM66 tripartite motif containing 66 2 2
MIRT652432 TMEM239 transmembrane protein 239 2 2
MIRT652656 TIMM10 translocase of inner mitochondrial membrane 10 2 2
MIRT652707 THBS2 thrombospondin 2 2 2
MIRT652812 TBL2 transducin beta like 2 2 2
MIRT653350 SMG7 SMG7, nonsense mediated mRNA decay factor 2 2
MIRT653471 SLC4A1 solute carrier family 4 member 1 (Diego blood group) 2 2
MIRT653658 SLC27A4 solute carrier family 27 member 4 2 2
MIRT654691 PSMB5 proteasome subunit beta 5 2 2
MIRT654735 PRLR prolactin receptor 2 2
MIRT654931 POLR3D RNA polymerase III subunit D 2 2
MIRT655209 PHAX phosphorylated adaptor for RNA export 2 2
MIRT655346 PCP4L1 Purkinje cell protein 4 like 1 2 2
MIRT655404 PANK1 pantothenate kinase 1 2 2
MIRT655482 PAK3 p21 (RAC1) activated kinase 3 2 2
MIRT655964 NDNF neuron derived neurotrophic factor 2 2
MIRT656017 MYPN myopalladin 2 2
MIRT656491 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 2
MIRT657151 ITGA1 integrin subunit alpha 1 2 2
MIRT657411 HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 2 2
MIRT657608 GRID1 glutamate ionotropic receptor delta type subunit 1 2 2
MIRT658181 FBXO9 F-box protein 9 2 2
MIRT658932 DPY19L1 dpy-19 like C-mannosyltransferase 1 2 2
MIRT659028 DHTKD1 dehydrogenase E1 and transketolase domain containing 1 2 2
MIRT659092 DENR density regulated re-initiation and release factor 2 2
MIRT659204 CYBB cytochrome b-245 beta chain 2 2
MIRT659718 CCDC93 coiled-coil domain containing 93 2 2
MIRT660185 BNC2 basonuclin 2 2 2
MIRT660805 AIFM2 apoptosis inducing factor, mitochondria associated 2 2 2
MIRT660900 ADCY6 adenylate cyclase 6 2 2
MIRT660925 ADAM19 ADAM metallopeptidase domain 19 2 2
MIRT661741 DTHD1 death domain containing 1 2 2
MIRT661998 EFTUD2 elongation factor Tu GTP binding domain containing 2 2 2
MIRT662639 PKHD1L1 PKHD1 like 1 2 2
MIRT664338 RAB8A RAB8A, member RAS oncogene family 2 2
MIRT666743 RALY RALY heterogeneous nuclear ribonucleoprotein 2 2
MIRT667070 PANK3 pantothenate kinase 3 2 2
MIRT667925 IGLON5 IgLON family member 5 2 2
MIRT668488 ETV3 ETS variant 3 2 2
MIRT668610 EHD4 EH domain containing 4 2 2
MIRT669419 ATP9A ATPase phospholipid transporting 9A (putative) 2 2
MIRT669652 ACSBG1 acyl-CoA synthetase bubblegum family member 1 2 2
MIRT674005 KCNN3 potassium calcium-activated channel subfamily N member 3 2 2
MIRT680447 SLCO5A1 solute carrier organic anion transporter family member 5A1 2 2
MIRT684326 GTF3C4 general transcription factor IIIC subunit 4 2 2
MIRT685625 C12orf49 chromosome 12 open reading frame 49 2 2
MIRT689978 ZNF185 zinc finger protein 185 with LIM domain 2 2
MIRT693962 HNRNPA1L2 heterogeneous nuclear ribonucleoprotein A1-like 2 2 2
MIRT698543 TFRC transferrin receptor 2 2
MIRT699982 RREB1 ras responsive element binding protein 1 2 2
MIRT702898 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 2 2
MIRT707383 VCAM1 vascular cell adhesion molecule 1 2 2
MIRT708312 CDH8 cadherin 8 2 2
MIRT708406 GRIN2A glutamate ionotropic receptor NMDA type subunit 2A 2 2
MIRT709299 LDLRAD4 low density lipoprotein receptor class A domain containing 4 2 2
MIRT710326 STK40 serine/threonine kinase 40 2 2
MIRT710729 C19orf68 zinc finger SWIM-type containing 9 2 2
MIRT710970 CMKLR1 chemerin chemokine-like receptor 1 2 2
MIRT711178 EMCN endomucin 2 2
MIRT711590 SETD1A SET domain containing 1A 2 2
MIRT711611 LHX5 LIM homeobox 5 2 2
MIRT711701 GMPR guanosine monophosphate reductase 2 2
MIRT711850 AMOTL2 angiomotin like 2 2 2
MIRT712358 NAT14 N-acetyltransferase 14 (putative) 2 2
MIRT712377 MTPN myotrophin 2 2
MIRT712469 KCNC3 potassium voltage-gated channel subfamily C member 3 2 2
MIRT712839 RHOA ras homolog family member A 2 2
MIRT713592 ANKMY1 ankyrin repeat and MYND domain containing 1 2 2
MIRT713982 ASIC4 acid sensing ion channel subunit family member 4 2 2
MIRT714534 ZBTB39 zinc finger and BTB domain containing 39 2 2
MIRT714570 GALNT10 polypeptide N-acetylgalactosaminyltransferase 10 2 2
MIRT714610 EXO5 exonuclease 5 2 2
MIRT714943 ZNF330 zinc finger protein 330 2 2
MIRT715132 ACADL acyl-CoA dehydrogenase, long chain 2 2
MIRT716018 TMPRSS5 transmembrane protease, serine 5 2 2
MIRT716204 TYW3 tRNA-yW synthesizing protein 3 homolog 2 2
MIRT716674 PPP6R1 protein phosphatase 6 regulatory subunit 1 2 2
MIRT717366 EDN2 endothelin 2 2 2
MIRT718110 CRTC1 CREB regulated transcription coactivator 1 2 2
MIRT718502 GYS1 glycogen synthase 1 2 2
MIRT719146 DPYSL5 dihydropyrimidinase like 5 2 2
MIRT719415 B4GALNT3 beta-1,4-N-acetyl-galactosaminyltransferase 3 2 2
MIRT719986 MAPK1 mitogen-activated protein kinase 1 2 2
MIRT720347 BACE2 beta-site APP-cleaving enzyme 2 2 2
MIRT720452 SLC16A5 solute carrier family 16 member 5 2 2
MIRT720493 TMEM178B transmembrane protein 178B 2 2
MIRT720666 C11orf54 chromosome 11 open reading frame 54 2 2
MIRT721091 CCBE1 collagen and calcium binding EGF domains 1 2 2
MIRT721334 IFNAR2 interferon alpha and beta receptor subunit 2 2 2
MIRT721384 MACC1 MACC1, MET transcriptional regulator 2 2
MIRT721508 CARHSP1 calcium regulated heat stable protein 1 2 2
MIRT721827 POU6F1 POU class 6 homeobox 1 2 2
MIRT722136 TTLL11 tubulin tyrosine ligase like 11 2 2
MIRT723070 GGA1 golgi associated, gamma adaptin ear containing, ARF binding protein 1 2 2
MIRT723115 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT723374 ZNF470 zinc finger protein 470 2 2
MIRT724446 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT724528 ATP2B1 ATPase plasma membrane Ca2+ transporting 1 2 2
MIRT724643 PKDREJ polycystin family receptor for egg jelly 2 2
MIRT724711 CRAMP1L cramped chromatin regulator homolog 1 2 2
MIRT724750 ZNF391 zinc finger protein 391 2 2
MIRT724770 PSG4 pregnancy specific beta-1-glycoprotein 4 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-6769b Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-mir-6769b Docetaxel+Cisplatin+5-Fluorouracil sensitive tissue (hypopharyngeal squamous cell carcinoma)
hsa-miR-6769b-3p Osimertinib 71496458 NSC779217 approved sensitive cell line (PC9)
hsa-miR-6769b-3p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-6769b-3p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)

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