pre-miRNA Information
pre-miRNA hsa-mir-4301   
Genomic Coordinates chr11: 113450023 - 113450088
Description Homo sapiens miR-4301 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4301
Sequence 11| UCCCACUACUUCACUUGUGA |30
Evidence Experimental
Experiments SOLiD
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs184176277 2 dbSNP
rs1191324913 13 dbSNP
rs1369198005 15 dbSNP
rs1036973189 16 dbSNP
rs944900541 18 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol TRAPPC3L   
Synonyms BET3L, bA259P20.2
Description trafficking protein particle complex 3 like
Transcript NM_001139444   
Expression
Putative miRNA Targets on TRAPPC3L
3'UTR of TRAPPC3L
(miRNA target sites are highlighted)
>TRAPPC3L|NM_001139444|3'UTR
   1 AGACTAGCACGGAAAATGCCACGGGGCGGCTAGCTGAGTTAATGTTAGCTAAACATGTATAGACATAGAAATTTTGAATT
  81 GCTTCATAGCATGAGCTTTGAAAGGTTTATAAATCAGCCAGAAATTTGAAATGCAGGGCATGAAGGCTTAAAGGTTTTTT
 161 TTTCCTTTTGCTTATAAATCACGCATTTTCAATCTCATGTCCACAAAATTTCATATGCAAATAGCTCCTTACAAGATAGC
 241 AGGCAGGAATTCCACATCTTACACTATCCATCCTCAGAGAAGCTGTTCATTCCATTCACGTATGGTAATGGGAAAAAAAA
 321 GCAGCACAAATACAAACAGTTGTGTATTTGTCTCTTTGCTGAAAAAAAAAGAATGAAATGATATAGCATAGAGTTTCCTA
 401 TATATAGACAGTAGTTTCTAGATACTGTATATTGCATTCCTTAAATAAATAATTCCATATTTCTAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' aguGUUCACUUCAUCACCCu 5'
             || ||  :||| |||| 
Target 5' attCACGTATGGTAATGGGa 3'
294 - 313 125.00 -13.90
2
miRNA  3' agUGUUCACUUCAUCACCCu 5'
            |||||   | |||  || 
Target 5' ttACAAG---A-TAGCAGGc 3'
229 - 244 86.00 -5.10
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN26442242 8 COSMIC
COSN14191052 10 COSMIC
COSN30178064 23 COSMIC
COSN31518736 27 COSMIC
COSN22279324 54 COSMIC
COSN16131307 62 COSMIC
COSN31480037 93 COSMIC
COSN30142273 125 COSMIC
COSN30116478 183 COSMIC
COSN31575777 202 COSMIC
COSN30128647 224 COSMIC
COSN31514275 235 COSMIC
COSN27242767 241 COSMIC
COSN29579902 362 COSMIC
COSN17305152 633 COSMIC
COSN14699696 664 COSMIC
COSN6722386 767 COSMIC
COSN2135846 871 COSMIC
COSN25023070 1157 COSMIC
COSN9964822 1635 COSMIC
COSN7595372 1893 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1174433432 8 dbSNP
rs530762905 10 dbSNP
rs1027690160 11 dbSNP
rs1274602473 18 dbSNP
rs1437719302 19 dbSNP
rs781036156 22 dbSNP
rs757254140 23 dbSNP
rs1278508059 27 dbSNP
rs186105406 27 dbSNP
rs961178962 28 dbSNP
rs1015359220 29 dbSNP
rs533041729 30 dbSNP
rs954162403 41 dbSNP
rs373776333 47 dbSNP
rs73769108 49 dbSNP
rs891012160 50 dbSNP
rs1028661368 66 dbSNP
rs3832400 68 dbSNP
rs965601542 78 dbSNP
rs1347825941 85 dbSNP
rs1275799992 86 dbSNP
rs751266363 92 dbSNP
rs777640751 95 dbSNP
rs574588986 100 dbSNP
rs1358529729 113 dbSNP
rs1418877089 118 dbSNP
rs1298510552 124 dbSNP
rs1363671755 135 dbSNP
rs1238850476 137 dbSNP
rs1348827986 138 dbSNP
rs903555740 142 dbSNP
rs1016289916 146 dbSNP
rs1043481901 154 dbSNP
rs1284583791 155 dbSNP
rs1353545036 155 dbSNP
rs945131013 158 dbSNP
rs140962692 164 dbSNP
rs200993473 164 dbSNP
rs1374865793 165 dbSNP
rs1332280136 170 dbSNP
rs1416098746 171 dbSNP
rs1200134222 172 dbSNP
rs1257119072 174 dbSNP
rs1425692889 175 dbSNP
rs762406312 179 dbSNP
rs181681581 182 dbSNP
rs1002251450 183 dbSNP
rs1471464678 199 dbSNP
rs905675664 204 dbSNP
rs1438958481 211 dbSNP
rs1159047677 213 dbSNP
rs1040241633 214 dbSNP
rs1056605697 222 dbSNP
rs1182374366 223 dbSNP
rs1044225939 224 dbSNP
rs752415039 235 dbSNP
rs949908277 236 dbSNP
rs150335649 237 dbSNP
rs371022711 239 dbSNP
rs895718637 241 dbSNP
rs1444616772 243 dbSNP
rs1280006525 250 dbSNP
rs1045764707 263 dbSNP
rs1205096273 276 dbSNP
rs1309746496 283 dbSNP
rs577131240 292 dbSNP
rs1270435999 293 dbSNP
rs920621535 294 dbSNP
rs1355137850 297 dbSNP
rs188929422 298 dbSNP
rs962075835 300 dbSNP
rs1237588815 304 dbSNP
rs1458249562 307 dbSNP
rs1177753140 308 dbSNP
rs528932338 308 dbSNP
rs932411091 312 dbSNP
rs1431289855 313 dbSNP
rs1175023755 317 dbSNP
rs1377849339 321 dbSNP
rs1450342597 321 dbSNP
rs34071551 321 dbSNP
rs911985766 325 dbSNP
rs1341177357 337 dbSNP
rs537327187 347 dbSNP
rs921039655 358 dbSNP
rs1398982014 367 dbSNP
rs560120430 371 dbSNP
rs976905947 371 dbSNP
rs1317492138 373 dbSNP
rs986613819 376 dbSNP
rs965964468 383 dbSNP
rs1325948942 386 dbSNP
rs955424665 387 dbSNP
rs1028233843 388 dbSNP
rs1015845529 392 dbSNP
rs1206706525 397 dbSNP
rs1234547900 400 dbSNP
rs1487427435 402 dbSNP
rs983440587 405 dbSNP
rs1269275875 409 dbSNP
rs952708633 411 dbSNP
rs1168175395 421 dbSNP
rs1027413693 425 dbSNP
rs140201245 426 dbSNP
rs967687861 429 dbSNP
rs1171823058 433 dbSNP
rs568119568 452 dbSNP
rs1009249085 455 dbSNP
rs892184208 457 dbSNP
rs1025041488 460 dbSNP
rs555195730 468 dbSNP
rs1277872543 469 dbSNP
rs1318808355 472 dbSNP
rs370448856 473 dbSNP
rs536796525 498 dbSNP
rs2637667 504 dbSNP
rs151079190 518 dbSNP
rs750911446 521 dbSNP
rs186481684 525 dbSNP
rs1209816879 526 dbSNP
rs1262024935 527 dbSNP
rs932334454 528 dbSNP
rs1334399289 533 dbSNP
rs1187782687 535 dbSNP
rs534634032 536 dbSNP
rs1287939534 537 dbSNP
rs570332565 547 dbSNP
rs1357066639 559 dbSNP
rs1404208795 563 dbSNP
rs1269677152 569 dbSNP
rs1367991606 570 dbSNP
rs1040856706 585 dbSNP
rs1297903320 591 dbSNP
rs1433097282 596 dbSNP
rs930875060 597 dbSNP
rs908711212 608 dbSNP
rs920860966 611 dbSNP
rs1315659498 627 dbSNP
rs1036287756 632 dbSNP
rs373019985 634 dbSNP
rs1361423044 637 dbSNP
rs552479544 639 dbSNP
rs1214218228 640 dbSNP
rs1284978199 660 dbSNP
rs7745080 664 dbSNP
rs1217545840 671 dbSNP
rs1235377358 676 dbSNP
rs1439949119 679 dbSNP
rs563190800 683 dbSNP
rs1472213607 704 dbSNP
rs1183609041 705 dbSNP
rs1387641143 716 dbSNP
rs920199405 717 dbSNP
rs1347936239 718 dbSNP
rs1158444761 733 dbSNP
rs1386194814 740 dbSNP
rs75659122 768 dbSNP
rs1166410369 777 dbSNP
rs1405609852 784 dbSNP
rs1418088722 790 dbSNP
rs1358740166 791 dbSNP
rs911978373 797 dbSNP
rs1448193917 799 dbSNP
rs987995461 802 dbSNP
rs776982241 811 dbSNP
rs1025010448 817 dbSNP
rs1014096725 824 dbSNP
rs1189806360 835 dbSNP
rs921120408 837 dbSNP
rs975290317 839 dbSNP
rs1031942700 843 dbSNP
rs967928263 844 dbSNP
rs529801992 845 dbSNP
rs904426168 848 dbSNP
rs1043028675 849 dbSNP
rs1022227294 854 dbSNP
rs559439024 862 dbSNP
rs541140220 869 dbSNP
rs577201059 874 dbSNP
rs1171116153 882 dbSNP
rs1424761691 888 dbSNP
rs899503563 891 dbSNP
rs1226335363 892 dbSNP
rs1338915626 899 dbSNP
rs956396578 900 dbSNP
rs1344189727 902 dbSNP
rs1298195238 903 dbSNP
rs1233505435 909 dbSNP
rs527856764 910 dbSNP
rs1365154323 912 dbSNP
rs762403330 938 dbSNP
rs1328164201 952 dbSNP
rs943798146 962 dbSNP
rs908685250 966 dbSNP
rs181241056 972 dbSNP
rs76338703 975 dbSNP
rs1223799887 977 dbSNP
rs576810374 978 dbSNP
rs1390274525 979 dbSNP
rs1045614521 983 dbSNP
rs545616314 984 dbSNP
rs1433114359 988 dbSNP
rs981026723 991 dbSNP
rs1440020169 992 dbSNP
rs1197226811 994 dbSNP
rs899386370 997 dbSNP
rs557535220 1007 dbSNP
rs1036613269 1009 dbSNP
rs74747880 1018 dbSNP
rs572648814 1025 dbSNP
rs1251409494 1034 dbSNP
rs1465177644 1035 dbSNP
rs1051838289 1036 dbSNP
rs1168504654 1044 dbSNP
rs932035758 1054 dbSNP
rs956989843 1065 dbSNP
rs1203322737 1066 dbSNP
rs553130514 1068 dbSNP
rs1405325716 1069 dbSNP
rs1275461039 1073 dbSNP
rs975208709 1075 dbSNP
rs371147496 1076 dbSNP
rs377508406 1077 dbSNP
rs1209255090 1078 dbSNP
rs977650809 1081 dbSNP
rs10554297 1086 dbSNP
rs111739504 1086 dbSNP
rs749126690 1086 dbSNP
rs1021514275 1093 dbSNP
rs1226097557 1097 dbSNP
rs534406127 1100 dbSNP
rs1251333717 1102 dbSNP
rs1340832758 1103 dbSNP
rs796362938 1110 dbSNP
rs1490631310 1113 dbSNP
rs1201967795 1116 dbSNP
rs996772883 1118 dbSNP
rs946533341 1121 dbSNP
rs915156811 1122 dbSNP
rs988088151 1127 dbSNP
rs1219641964 1129 dbSNP
rs1372123523 1141 dbSNP
rs1286016182 1148 dbSNP
rs956382486 1153 dbSNP
rs1035077576 1155 dbSNP
rs1161459117 1156 dbSNP
rs570468771 1161 dbSNP
rs981815179 1162 dbSNP
rs1425082338 1167 dbSNP
rs1304686789 1168 dbSNP
rs899470268 1169 dbSNP
rs1295808599 1174 dbSNP
rs189458826 1177 dbSNP
rs369709154 1183 dbSNP
rs1311818153 1187 dbSNP
rs1007917825 1188 dbSNP
rs537006085 1197 dbSNP
rs969511579 1204 dbSNP
rs1360709157 1217 dbSNP
rs1023386536 1218 dbSNP
rs1284264401 1219 dbSNP
rs1488157419 1222 dbSNP
rs1205992634 1223 dbSNP
rs1264118775 1233 dbSNP
rs1422196963 1235 dbSNP
rs1186861337 1243 dbSNP
rs1357976718 1253 dbSNP
rs1384565578 1258 dbSNP
rs748203615 1261 dbSNP
rs1165368592 1265 dbSNP
rs899374986 1270 dbSNP
rs1452777340 1271 dbSNP
rs1015117181 1276 dbSNP
rs112210042 1279 dbSNP
rs1386601996 1281 dbSNP
rs1005114676 1283 dbSNP
rs569627387 1301 dbSNP
rs111924432 1317 dbSNP
rs1384216594 1319 dbSNP
rs1248867214 1320 dbSNP
rs548049796 1323 dbSNP
rs1307673712 1325 dbSNP
rs1052169623 1326 dbSNP
rs1411719829 1328 dbSNP
rs541083660 1337 dbSNP
rs898669245 1346 dbSNP
rs1473698278 1349 dbSNP
rs932007734 1352 dbSNP
rs1203136259 1357 dbSNP
rs565518500 1358 dbSNP
rs9374607 1359 dbSNP
rs867301376 1360 dbSNP
rs745900466 1363 dbSNP
rs781358727 1365 dbSNP
rs1257732792 1380 dbSNP
rs1210753955 1382 dbSNP
rs946521875 1385 dbSNP
rs1328153449 1390 dbSNP
rs1266008750 1396 dbSNP
rs915104180 1399 dbSNP
rs377006206 1405 dbSNP
rs987993245 1410 dbSNP
rs1175236962 1413 dbSNP
rs935379885 1423 dbSNP
rs1454115416 1424 dbSNP
rs935219005 1432 dbSNP
rs1350790212 1448 dbSNP
rs1292109670 1452 dbSNP
rs927912402 1453 dbSNP
rs1392341616 1459 dbSNP
rs1309538213 1461 dbSNP
rs982147596 1463 dbSNP
rs1310782651 1472 dbSNP
rs1223171243 1473 dbSNP
rs184486703 1484 dbSNP
rs969121116 1485 dbSNP
rs144418449 1488 dbSNP
rs543462148 1490 dbSNP
rs1393832924 1491 dbSNP
rs1231109011 1492 dbSNP
rs1480244663 1495 dbSNP
rs924018703 1500 dbSNP
rs973156860 1501 dbSNP
rs567504350 1503 dbSNP
rs576301316 1503 dbSNP
rs963496067 1505 dbSNP
rs1470679890 1513 dbSNP
rs1015022376 1519 dbSNP
rs770719682 1521 dbSNP
rs1005021302 1528 dbSNP
rs1305061596 1533 dbSNP
rs1467017410 1537 dbSNP
rs879316959 1539 dbSNP
rs1157491552 1565 dbSNP
rs968506106 1569 dbSNP
rs1030584129 1571 dbSNP
rs544269343 1572 dbSNP
rs192168340 1579 dbSNP
rs1164138324 1583 dbSNP
rs1422093475 1588 dbSNP
rs1284178665 1596 dbSNP
rs561589820 1598 dbSNP
rs1216907407 1605 dbSNP
rs975303723 1608 dbSNP
rs963938136 1614 dbSNP
rs543320583 1622 dbSNP
rs1011646747 1628 dbSNP
rs891900774 1631 dbSNP
rs1052235157 1632 dbSNP
rs935183392 1634 dbSNP
rs886815479 1640 dbSNP
rs1025774812 1642 dbSNP
rs1418213619 1645 dbSNP
rs1428585013 1654 dbSNP
rs1348589187 1660 dbSNP
rs995224158 1664 dbSNP
rs189617573 1667 dbSNP
rs11965447 1668 dbSNP
rs1398441591 1672 dbSNP
rs1269797041 1685 dbSNP
rs1216390156 1688 dbSNP
rs1242189496 1688 dbSNP
rs1297658507 1690 dbSNP
rs947698439 1691 dbSNP
rs1221511267 1692 dbSNP
rs1292172992 1693 dbSNP
rs948254057 1694 dbSNP
rs1453984472 1700 dbSNP
rs777428593 1709 dbSNP
rs1241140456 1716 dbSNP
rs1485914323 1722 dbSNP
rs1187694805 1725 dbSNP
rs1383956448 1730 dbSNP
rs896734630 1731 dbSNP
rs1164747350 1734 dbSNP
rs1056756416 1740 dbSNP
rs935290601 1750 dbSNP
rs923974125 1754 dbSNP
rs1044170161 1758 dbSNP
rs946800746 1760 dbSNP
rs1380527305 1774 dbSNP
rs1245198731 1777 dbSNP
rs1315636426 1778 dbSNP
rs1361396484 1783 dbSNP
rs1318936378 1784 dbSNP
rs916272390 1795 dbSNP
rs1221794862 1797 dbSNP
rs1283125147 1806 dbSNP
rs1447174914 1814 dbSNP
rs374744334 1815 dbSNP
rs1389884281 1827 dbSNP
rs1184822961 1830 dbSNP
rs1245497526 1833 dbSNP
rs1468937349 1834 dbSNP
rs1158290444 1835 dbSNP
rs1162826896 1838 dbSNP
rs1402621157 1838 dbSNP
rs1456585329 1840 dbSNP
rs1370261385 1842 dbSNP
rs2640860 1849 dbSNP
rs1405522599 1853 dbSNP
rs554064849 1855 dbSNP
rs1165640858 1856 dbSNP
rs184897545 1857 dbSNP
rs912464077 1860 dbSNP
rs1278686366 1865 dbSNP
rs1351098854 1866 dbSNP
rs368706691 1869 dbSNP
rs986736955 1873 dbSNP
rs2640861 1881 dbSNP
rs576867591 1882 dbSNP
rs2640862 1883 dbSNP
rs1322296271 1885 dbSNP
rs1203682425 1891 dbSNP
rs1265547876 1904 dbSNP
rs1436541710 1909 dbSNP
rs951083658 1912 dbSNP
rs1471345582 1919 dbSNP
rs555396952 1924 dbSNP
rs1266425921 1926 dbSNP
rs113609256 1934 dbSNP
rs1489296676 1936 dbSNP
rs1408184864 1937 dbSNP
rs1328064054 1938 dbSNP
rs1265501979 1949 dbSNP
rs1411418609 1955 dbSNP
rs1227099811 1958 dbSNP
rs1223633056 1960 dbSNP
rs1344405293 1960 dbSNP
rs1264413773 1961 dbSNP
rs536666341 1965 dbSNP
rs151017381 1966 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084065. RNA binding protein: AGO2. Condition:CLIP_emetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' aguguucacuucaUCACCCu 5'
                       |||||| 
Target 5' ----------caaAGUGGGa 3'
1 - 10
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084065
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_emetine_AbnovaAb
Location of target site ENST00000356128.4 | 3UTR | CAAAGUGGGAGGAUUGCUUGAGC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
83 hsa-miR-4301 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT081134 LDLR low density lipoprotein receptor 2 4
MIRT090911 ARHGEF26 Rho guanine nucleotide exchange factor 26 2 2
MIRT229436 MECP2 methyl-CpG binding protein 2 2 2
MIRT274717 CPSF6 cleavage and polyadenylation specific factor 6 2 2
MIRT350957 BACH1 BTB domain and CNC homolog 1 2 2
MIRT386722 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 2
MIRT446022 PEX3 peroxisomal biogenesis factor 3 2 2
MIRT481303 ATP5G3 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9) 2 14
MIRT483959 ZNF354B zinc finger protein 354B 2 6
MIRT495667 TUBAL3 tubulin alpha like 3 2 2
MIRT496554 TBX15 T-box 15 2 2
MIRT497702 ARL6IP6 ADP ribosylation factor like GTPase 6 interacting protein 6 2 2
MIRT498105 RMND5A required for meiotic nuclear division 5 homolog A 2 2
MIRT512535 SEMA4D semaphorin 4D 2 2
MIRT512556 MFN2 mitofusin 2 2 6
MIRT521465 RABGAP1 RAB GTPase activating protein 1 2 6
MIRT526236 C2orf15 chromosome 2 open reading frame 15 2 2
MIRT526743 HLA-DOB major histocompatibility complex, class II, DO beta 2 2
MIRT527578 BRD7 bromodomain containing 7 2 4
MIRT528038 WT1 Wilms tumor 1 2 2
MIRT528267 GPRIN2 G protein regulated inducer of neurite outgrowth 2 2 2
MIRT528505 HTR7 5-hydroxytryptamine receptor 7 2 4
MIRT528758 RPS27 ribosomal protein S27 2 6
MIRT528999 IPO9 importin 9 2 2
MIRT529701 MRPL30 mitochondrial ribosomal protein L30 2 2
MIRT529781 C17orf82 chromosome 17 open reading frame 82 2 2
MIRT533797 TMEM119 transmembrane protein 119 2 6
MIRT535308 PHF12 PHD finger protein 12 2 2
MIRT535917 MKL2 MKL1/myocardin like 2 2 2
MIRT544892 OSBPL1A oxysterol binding protein like 1A 2 2
MIRT555423 PPIC peptidylprolyl isomerase C 2 2
MIRT562068 KLHL15 kelch like family member 15 2 2
MIRT565623 SLC31A1 solute carrier family 31 member 1 2 2
MIRT565661 SIX1 SIX homeobox 1 2 2
MIRT570138 IL1RL2 interleukin 1 receptor like 2 2 2
MIRT571045 YRDC yrdC N6-threonylcarbamoyltransferase domain containing 2 2
MIRT621232 LMAN1 lectin, mannose binding 1 2 2
MIRT622272 SH3TC2 SH3 domain and tetratricopeptide repeats 2 2 2
MIRT623844 GAN gigaxonin 2 2
MIRT626158 NFYA nuclear transcription factor Y subunit alpha 2 2
MIRT626464 CMKLR1 chemerin chemokine-like receptor 1 2 2
MIRT632087 ALDH1A2 aldehyde dehydrogenase 1 family member A2 2 2
MIRT637243 FAM26E calcium homeostasis modulator family member 5 2 2
MIRT642710 FGFR1OP2 FGFR1 oncogene partner 2 2 2
MIRT643611 KANSL3 KAT8 regulatory NSL complex subunit 3 2 2
MIRT644270 PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 2 2
MIRT645470 SPIN3 spindlin family member 3 2 2
MIRT649193 DNPEP aspartyl aminopeptidase 2 2
MIRT650776 POP4 POP4 homolog, ribonuclease P/MRP subunit 2 2
MIRT651345 ZC2HC1C zinc finger C2HC-type containing 1C 2 2
MIRT652237 TRAPPC3L trafficking protein particle complex 3 like 2 2
MIRT652587 TIMM8A translocase of inner mitochondrial membrane 8A 2 2
MIRT654591 PURA purine rich element binding protein A 2 2
MIRT654649 PTAFR platelet activating factor receptor 2 2
MIRT656842 KLF7 Kruppel like factor 7 2 2
MIRT657209 IKZF2 IKAROS family zinc finger 2 2 2
MIRT658513 ETV3 ETS variant 3 2 2
MIRT659448 CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 2 2
MIRT668816 CYLD CYLD lysine 63 deubiquitinase 2 2
MIRT669067 CELSR3 cadherin EGF LAG seven-pass G-type receptor 3 2 2
MIRT677711 ELOF1 elongation factor 1 homolog 2 4
MIRT687146 PTPN12 protein tyrosine phosphatase, non-receptor type 12 2 2
MIRT698498 THOC2 THO complex 2 2 2
MIRT707930 PPP1R3D protein phosphatase 1 regulatory subunit 3D 4 2
MIRT708737 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT710031 POLL DNA polymerase lambda 2 2
MIRT712175 STK4 serine/threonine kinase 4 2 2
MIRT715297 MAPK1 mitogen-activated protein kinase 1 2 2
MIRT716892 AGPAT6 glycerol-3-phosphate acyltransferase 4 2 2
MIRT717378 RBM41 RNA binding motif protein 41 2 2
MIRT718082 CLIC5 chloride intracellular channel 5 2 2
MIRT718721 ANKRD18A ankyrin repeat domain 18A 2 2
MIRT719152 DPYSL5 dihydropyrimidinase like 5 2 2
MIRT719224 CAMK4 calcium/calmodulin dependent protein kinase IV 2 2
MIRT719528 SRCIN1 SRC kinase signaling inhibitor 1 2 2
MIRT719861 KLF2 Kruppel like factor 2 2 2
MIRT720326 CAMK2G calcium/calmodulin dependent protein kinase II gamma 2 2
MIRT721596 SREBF1 sterol regulatory element binding transcription factor 1 2 2
MIRT722020 NEBL nebulette 2 2
MIRT722484 QSOX1 quiescin sulfhydryl oxidase 1 2 2
MIRT722614 TEAD1 TEA domain transcription factor 1 2 2
MIRT723664 RPTN repetin 2 2
MIRT723939 SVOP SV2 related protein 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-4 Dexamethasone approved 5743 Microarray primary rat thymocytes 20847043 2010 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4301 Cisplatin 5460033 NSC119875 approved sensitive High Hepatocellular Carcinoma cell line (Hep3B, 97L)
hsa-miR-4301 Imatinib 5291 NSC743414 approved resistant High Chronic Myelogenous Leukemia cell line (K562)
hsa-mir-4301 Paclitaxel 36314 NSC125973 approved resistant cell line (BAS)
hsa-mir-4301 Paclitaxel 36314 NSC125973 approved sensitive cell line (W1)
hsa-mir-4301 Doxorubicin 31703 NSC123127 approved sensitive cell line (W1)
hsa-mir-4301 Methotrexate 126941 NSC740 approved sensitive cell line (W1)
hsa-mir-4301 Topotecan 60699 NSC609699 approved sensitive cell line (W1)
hsa-miR-4301 Gefitinib 123631 NSC715055 approved resistant cell line (PC9)
hsa-miR-4301 Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)

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