pre-miRNA Information
pre-miRNA hsa-mir-2355   
Genomic Coordinates chr2: 207109987 - 207110073
Description Homo sapiens miR-2355 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-2355-5p
Sequence 11| AUCCCCAGAUACAAUGGACAA |31
Evidence Experimental
Experiments SOLiD
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 1 2 - 207110063 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1268296297 4 dbSNP
rs1361046879 5 dbSNP
rs1219551997 6 dbSNP
rs1295756820 12 dbSNP
rs1345273529 15 dbSNP
rs977145706 15 dbSNP
rs1209629984 20 dbSNP
rs759940260 21 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol SIX5   
Synonyms BOR2, DMAHP
Description SIX homeobox 5
Transcript NM_175875   
Expression
Putative miRNA Targets on SIX5
3'UTR of SIX5
(miRNA target sites are highlighted)
>SIX5|NM_175875|3'UTR
   1 CCCAGTGTGGCCCCGTGGCCTCTCCCGACATTGGTGCTGAAGACGCAGGGACAGGAATGGGAGGGGGGAGCCCCAGAAAT
  81 GCGGTTGCTGAAGACCCCAGTCACCACATCCTTCTGCCTGGGTGGCCTCTCCAAGCCCTGGTGGTGCTGGGGGTTGTATC
 161 CCCGGCCACCTCCTGTCCAGGTCTCCATCCCCCTTTGGATGGGAGGCCTCTCTGTTACAGCCCTCCCCATGCTGTGCCCT
 241 GCCATATACGTGGGGGACTCAGGGTCCTGACTCAGGGGCCCTGCCCCCTCCACTTGGTACTAGCTGTAAGCGGAACACCC
 321 TGCCCCAGGGCCGGACTTCCAGCCCCCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGATAGC
 401 TGGTGTTGTCACAACTGCCTGGAATCCGAAGGTGGAGGACAGGCAGCCCCGCGCCCCTGAGACTGGAGACCCTCCCCAGT
 481 GTGGCATTTCCTGCCAGGGGCGGGGGGTGGGGCAGCTGTGGGGAGACGGGGGTCTTCCTTCACCAGCTCCCCTCGACTCA
 561 AGCCCTTGTCCTCATTATCCGGCCCAGACCAAAGATTCCCTCATCCCTGGGGGCAGCCCTGCCGCTGTGTCTCCTTTGTA
 641 TCCTAAATCTTTATTTTTCTAGGACATGTTATGCCTCCATTTTCAATTAAAATAAAGTTATCGGATTACACCACCAAAAA
 721 AAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' aacAGGUAACAUAGACCCCUa 5'
             ||| |  |  ||||||: 
Target 5' gatTCCCTCATCCCTGGGGGc 3'
594 - 614 134.00 -12.94
2
miRNA  3' aacaGGUAACA-UA-GACCCCUa 5'
              || | || :| ||||||: 
Target 5' caagCCCTGGTGGTGCTGGGGGt 3'
132 - 154 133.00 -18.50
3
miRNA  3' aacagguaacauagACCCCUa 5'
                        |||||| 
Target 5' gggtggggcagctgTGGGGAg 3'
505 - 525 120.00 -9.00
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30119032 26 COSMIC
COSN26994780 27 COSMIC
COSN30124668 49 COSMIC
COSN1216739 63 COSMIC
COSN30503343 78 COSMIC
COSN31547343 88 COSMIC
COSN26994775 117 COSMIC
COSN30525737 160 COSMIC
COSN30104079 218 COSMIC
COSN20079300 252 COSMIC
COSN20706405 270 COSMIC
COSN17465991 317 COSMIC
COSN31532127 334 COSMIC
COSN28682974 452 COSMIC
COSN31594174 501 COSMIC
COSN14666401 533 COSMIC
COSN31572778 580 COSMIC
COSN5438525 624 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs748122958 3 dbSNP
rs1230948039 4 dbSNP
rs779940276 5 dbSNP
rs1413826890 6 dbSNP
rs772216581 7 dbSNP
rs1005950812 10 dbSNP
rs1381386631 13 dbSNP
rs373814605 14 dbSNP
rs918658376 15 dbSNP
rs1459499174 22 dbSNP
rs377764854 25 dbSNP
rs549470439 26 dbSNP
rs529275321 27 dbSNP
rs75443440 32 dbSNP
rs1019906076 35 dbSNP
rs547671488 37 dbSNP
rs779539387 39 dbSNP
rs7257701 44 dbSNP
rs7257515 45 dbSNP
rs386809783 46 dbSNP
rs199784167 47 dbSNP
rs759116973 49 dbSNP
rs1271862691 51 dbSNP
rs1482449555 52 dbSNP
rs1202525693 63 dbSNP
rs1011651283 64 dbSNP
rs1440639872 65 dbSNP
rs541507866 69 dbSNP
rs938008042 70 dbSNP
rs1306849119 73 dbSNP
rs891584801 81 dbSNP
rs191930690 82 dbSNP
rs1053263845 83 dbSNP
rs945556774 86 dbSNP
rs562416403 87 dbSNP
rs542711350 88 dbSNP
rs1404406763 93 dbSNP
rs914094981 94 dbSNP
rs1229334698 100 dbSNP
rs1297539005 102 dbSNP
rs1002691514 104 dbSNP
rs117997878 105 dbSNP
rs553395014 107 dbSNP
rs1357061451 112 dbSNP
rs1276319665 114 dbSNP
rs921023165 116 dbSNP
rs1208996875 118 dbSNP
rs111867295 131 dbSNP
rs948598307 139 dbSNP
rs962374755 141 dbSNP
rs916574317 153 dbSNP
rs1468510536 157 dbSNP
rs1447713347 160 dbSNP
rs544694134 161 dbSNP
rs1182845086 163 dbSNP
rs931303032 164 dbSNP
rs1246336409 167 dbSNP
rs1014096465 175 dbSNP
rs577947584 177 dbSNP
rs1449253049 183 dbSNP
rs1320433957 187 dbSNP
rs1055235053 193 dbSNP
rs1002188276 194 dbSNP
rs1299092608 196 dbSNP
rs1339498858 198 dbSNP
rs1218229521 205 dbSNP
rs972799203 207 dbSNP
rs965548013 210 dbSNP
rs558317052 212 dbSNP
rs538018125 214 dbSNP
rs569453470 215 dbSNP
rs1189650979 220 dbSNP
rs1292430467 225 dbSNP
rs954353486 226 dbSNP
rs1022292281 231 dbSNP
rs1386914419 232 dbSNP
rs1350278715 233 dbSNP
rs1459233673 236 dbSNP
rs577252141 239 dbSNP
rs934178908 244 dbSNP
rs779606423 249 dbSNP
rs555529276 250 dbSNP
rs955887775 252 dbSNP
rs1031434417 256 dbSNP
rs1287409376 259 dbSNP
rs1326829865 262 dbSNP
rs1210455970 276 dbSNP
rs535960214 278 dbSNP
rs1248657371 279 dbSNP
rs907045992 284 dbSNP
rs1022717583 285 dbSNP
rs1181746186 289 dbSNP
rs1410156922 300 dbSNP
rs60934577 306 dbSNP
rs1166626585 307 dbSNP
rs887739217 311 dbSNP
rs1049431660 312 dbSNP
rs1390711532 314 dbSNP
rs1404232761 319 dbSNP
rs1321094716 320 dbSNP
rs962346779 321 dbSNP
rs1405112384 330 dbSNP
rs60009313 331 dbSNP
rs527560484 332 dbSNP
rs1230045684 333 dbSNP
rs775851686 333 dbSNP
rs1266850291 336 dbSNP
rs1190723990 337 dbSNP
rs1488916326 341 dbSNP
rs769250354 342 dbSNP
rs1292044579 344 dbSNP
rs571484885 350 dbSNP
rs770083556 351 dbSNP
rs912643630 353 dbSNP
rs1248622298 357 dbSNP
rs985665247 359 dbSNP
rs1484230403 362 dbSNP
rs1024240877 364 dbSNP
rs1183064838 367 dbSNP
rs1368399531 369 dbSNP
rs1472055719 375 dbSNP
rs1165519953 380 dbSNP
rs558901544 382 dbSNP
rs1375713409 387 dbSNP
rs187437149 388 dbSNP
rs1269173126 390 dbSNP
rs958553952 391 dbSNP
rs1322114868 392 dbSNP
rs914859507 394 dbSNP
rs138057336 395 dbSNP
rs1445669080 399 dbSNP
rs1285917203 400 dbSNP
rs955752770 403 dbSNP
rs1360221216 406 dbSNP
rs1031256527 408 dbSNP
rs1227831822 410 dbSNP
rs1367725727 411 dbSNP
rs1272740969 412 dbSNP
rs1294885862 418 dbSNP
rs1196611476 419 dbSNP
rs981162538 421 dbSNP
rs1441067100 427 dbSNP
rs1432454784 428 dbSNP
rs1444692213 432 dbSNP
rs879240350 433 dbSNP
rs1387931958 437 dbSNP
rs1463147662 438 dbSNP
rs1168161114 440 dbSNP
rs1044081116 447 dbSNP
rs971152846 450 dbSNP
rs1022665173 451 dbSNP
rs182439328 452 dbSNP
rs1434464807 453 dbSNP
rs1295416540 454 dbSNP
rs1328286974 456 dbSNP
rs1228361181 459 dbSNP
rs542305939 463 dbSNP
rs887594543 481 dbSNP
rs529004512 495 dbSNP
rs900045929 497 dbSNP
rs1264285894 499 dbSNP
rs993797353 501 dbSNP
rs941075881 502 dbSNP
rs1028817522 508 dbSNP
rs1193416347 508 dbSNP
rs374223300 508 dbSNP
rs909641018 508 dbSNP
rs1376767358 513 dbSNP
rs1427354984 520 dbSNP
rs997756797 524 dbSNP
rs1178411219 527 dbSNP
rs982829360 530 dbSNP
rs929678323 532 dbSNP
rs901639771 533 dbSNP
rs1318482773 535 dbSNP
rs1249028253 539 dbSNP
rs1387174572 542 dbSNP
rs1211017511 543 dbSNP
rs1460356348 547 dbSNP
rs897163084 552 dbSNP
rs867983171 554 dbSNP
rs958523198 555 dbSNP
rs1234647945 559 dbSNP
rs1207343227 561 dbSNP
rs1263059142 562 dbSNP
rs1312195084 565 dbSNP
rs1037070262 570 dbSNP
rs746364119 574 dbSNP
rs1364099467 578 dbSNP
rs944016830 579 dbSNP
rs968506694 580 dbSNP
rs1429666595 581 dbSNP
rs529739397 589 dbSNP
rs1399832132 592 dbSNP
rs1009964583 595 dbSNP
rs1302121571 600 dbSNP
rs746350984 600 dbSNP
rs781776160 602 dbSNP
rs1293082772 606 dbSNP
rs1388672780 609 dbSNP
rs534912874 612 dbSNP
rs577584260 613 dbSNP
rs191289354 614 dbSNP
rs998433045 619 dbSNP
rs771328873 623 dbSNP
rs914702913 624 dbSNP
rs900098016 627 dbSNP
rs1264295594 634 dbSNP
rs1489653775 636 dbSNP
rs1224198206 642 dbSNP
rs1039814500 653 dbSNP
rs990420999 658 dbSNP
rs558136870 665 dbSNP
rs1179817349 666 dbSNP
rs1449055389 667 dbSNP
rs1419532343 672 dbSNP
rs1164009136 674 dbSNP
rs375018587 675 dbSNP
rs888171735 677 dbSNP
rs1190780353 678 dbSNP
rs1370250149 697 dbSNP
rs934872794 702 dbSNP
rs1046835709 703 dbSNP
rs924856486 709 dbSNP
rs929619880 711 dbSNP
rs1311254949 715 dbSNP
rs981110179 716 dbSNP
rs1247602670 717 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084065. RNA binding protein: AGO2. Condition:CLIP_emetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' aacagguaacauaGACCCCUa 5'
                       ||||||| 
Target 5' -----aaaaggggCUGGGGAc 3'
1 - 16
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084065
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_emetine_AbnovaAb
Location of target site ENST00000560168.1 | 3UTR | aaaaggggcuggggac
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
STAD -0.413 0.01 -0.295 0.05 32 Click to see details
HNSC -0.265 0.04 -0.178 0.13 42 Click to see details
PRAD 0.218 0.06 0.139 0.17 50 Click to see details
KIRP 0.234 0.1 0.132 0.24 32 Click to see details
CHOL -0.452 0.11 -0.500 0.09 9 Click to see details
KICH -0.218 0.15 -0.145 0.24 25 Click to see details
UCEC -0.24 0.16 -0.325 0.09 19 Click to see details
THCA -0.111 0.2 -0.127 0.17 59 Click to see details
CESC -0.798 0.21 -0.500 0.33 3 Click to see details
LUAD 0.261 0.21 0.552 0.03 12 Click to see details
PCPG -0.797 0.21 -0.500 0.33 3 Click to see details
LIHC -0.119 0.21 -0.086 0.28 49 Click to see details
PAAD -0.558 0.22 -0.800 0.1 4 Click to see details
ESCA -0.215 0.26 -0.136 0.35 11 Click to see details
BLCA -0.16 0.26 -0.259 0.15 18 Click to see details
KIRC -0.061 0.31 -0.182 0.07 68 Click to see details
LUSC -0.077 0.32 -0.083 0.31 38 Click to see details
BRCA -0.001 0.5 -0.113 0.15 84 Click to see details
BRCA -0.001 0.5 -0.113 0.15 84 Click to see details
164 hsa-miR-2355-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT190653 PABPN1 poly(A) binding protein nuclear 1 2 2
MIRT286477 TAOK1 TAO kinase 1 2 4
MIRT318993 GIGYF1 GRB10 interacting GYF protein 1 2 2
MIRT345622 DCAF7 DDB1 and CUL4 associated factor 7 2 4
MIRT442513 SYT7 synaptotagmin 7 2 4
MIRT444247 CTNND1 catenin delta 1 2 2
MIRT444780 ECE1 endothelin converting enzyme 1 2 2
MIRT456525 TMEM63A transmembrane protein 63A 2 2
MIRT468960 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT469834 R3HDM4 R3H domain containing 4 2 2
MIRT470027 PTP4A1 protein tyrosine phosphatase type IVA, member 1 2 2
MIRT471167 PHB2 prohibitin 2 2 2
MIRT475819 HDGF heparin binding growth factor 2 4
MIRT479389 CDKN1B cyclin dependent kinase inhibitor 1B 2 6
MIRT481747 APH1A aph-1 homolog A, gamma-secretase subunit 2 2
MIRT485220 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT487259 CCNF cyclin F 2 2
MIRT489971 MCC mutated in colorectal cancers 2 4
MIRT491399 C1D C1D nuclear receptor corepressor 2 2
MIRT494959 CCDC144A coiled-coil domain containing 144A 2 4
MIRT494979 PPP5D1 PPP5 tetratricopeptide repeat domain containing 1 2 2
MIRT495225 CHST14 carbohydrate sulfotransferase 14 2 2
MIRT496550 TBX15 T-box 15 2 2
MIRT501612 PISD phosphatidylserine decarboxylase 2 2
MIRT509393 TRIM24 tripartite motif containing 24 2 2
MIRT519616 ZNF788 zinc finger family member 788 2 4
MIRT519738 ZNF394 zinc finger protein 394 2 4
MIRT521230 SAR1A secretion associated Ras related GTPase 1A 2 4
MIRT521801 POM121C POM121 transmembrane nucleoporin C 2 2
MIRT526233 C2orf15 chromosome 2 open reading frame 15 2 2
MIRT526932 CMSS1 cms1 ribosomal small subunit homolog (yeast) 2 2
MIRT529189 ACBD7 acyl-CoA binding domain containing 7 2 2
MIRT529329 ZNF649 zinc finger protein 649 2 2
MIRT529698 MRPL30 mitochondrial ribosomal protein L30 2 2
MIRT529921 TOP1MT DNA topoisomerase I mitochondrial 2 2
MIRT530032 SMC1A structural maintenance of chromosomes 1A 2 2
MIRT530898 C9orf3 chromosome 9 open reading frame 3 2 2
MIRT531621 TM4SF5 transmembrane 4 L six family member 5 2 4
MIRT533132 XIAP X-linked inhibitor of apoptosis 2 2
MIRT533210 WAPAL WAPL cohesin release factor 2 2
MIRT534058 ST6GALNAC3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 2 2
MIRT535487 PARVB parvin beta 2 2
MIRT536749 HOXD9 homeobox D9 2 2
MIRT551456 CARKD NAD(P)HX dehydratase 2 2
MIRT551858 ASB6 ankyrin repeat and SOCS box containing 6 2 2
MIRT552095 FAM8A1 family with sequence similarity 8 member A1 2 2
MIRT552332 ZNF704 zinc finger protein 704 2 2
MIRT552549 ZFP36L2 ZFP36 ring finger protein like 2 2 2
MIRT561505 SRSF2 serine and arginine rich splicing factor 2 2 2
MIRT562702 ZNF415 zinc finger protein 415 2 2
MIRT563052 ZNF138 zinc finger protein 138 2 2
MIRT564592 ZNF791 zinc finger protein 791 2 2
MIRT566422 PIGA phosphatidylinositol glycan anchor biosynthesis class A 2 2
MIRT570176 RCBTB1 RCC1 and BTB domain containing protein 1 2 2
MIRT570866 ZNF525 zinc finger protein 525 2 2
MIRT570875 ZFP1 ZFP1 zinc finger protein 2 2
MIRT571517 ZNF625 zinc finger protein 625 2 2
MIRT572551 DKK3 dickkopf WNT signaling pathway inhibitor 3 2 2
MIRT610894 HINFP histone H4 transcription factor 2 2
MIRT611037 PTGES prostaglandin E synthase 2 2
MIRT611479 HSPA4 heat shock protein family A (Hsp70) member 4 2 4
MIRT612419 SP1 Sp1 transcription factor 2 2
MIRT614478 FRMPD3 FERM and PDZ domain containing 3 2 2
MIRT616318 CACNA1A calcium voltage-gated channel subunit alpha1 A 2 2
MIRT616929 ZNF638 zinc finger protein 638 2 2
MIRT618131 GABARAPL3 GABA type A receptor associated protein like 3 pseudogene 2 2
MIRT618452 ZFP30 ZFP30 zinc finger protein 2 4
MIRT620671 BBS5 Bardet-Biedl syndrome 5 2 2
MIRT620713 ASB16 ankyrin repeat and SOCS box containing 16 2 2
MIRT621126 EMC7 ER membrane protein complex subunit 7 2 4
MIRT621443 TOMM22 translocase of outer mitochondrial membrane 22 2 2
MIRT623491 KCTD11 potassium channel tetramerization domain containing 11 2 2
MIRT623783 GOSR1 golgi SNAP receptor complex member 1 2 2
MIRT623918 FNBP1L formin binding protein 1 like 2 2
MIRT625723 CXorf38 chromosome X open reading frame 38 2 2
MIRT625778 GCNT1 glucosaminyl (N-acetyl) transferase 1, core 2 2 2
MIRT626940 TTR transthyretin 2 2
MIRT627357 TSC22D2 TSC22 domain family member 2 2 2
MIRT632078 ALDH1A2 aldehyde dehydrogenase 1 family member A2 2 2
MIRT633361 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT639793 MVK mevalonate kinase 2 2
MIRT643761 NAGK N-acetylglucosamine kinase 2 2
MIRT644358 NDUFAF6 NADH:ubiquinone oxidoreductase complex assembly factor 6 2 2
MIRT645558 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT646588 ANKRD36 ankyrin repeat domain 36 2 2
MIRT646631 SLC25A46 solute carrier family 25 member 46 2 2
MIRT648066 HSPA6 heat shock protein family A (Hsp70) member 6 2 2
MIRT648142 SUCLG2 succinate-CoA ligase GDP-forming beta subunit 2 2
MIRT648416 MYOZ3 myozenin 3 2 2
MIRT649218 AMMECR1L AMMECR1 like 2 2
MIRT649772 MRPS27 mitochondrial ribosomal protein S27 2 4
MIRT650510 UFM1 ubiquitin fold modifier 1 2 2
MIRT651007 ZNF740 zinc finger protein 740 2 2
MIRT651524 WNT2B Wnt family member 2B 2 2
MIRT652014 TTYH3 tweety family member 3 2 2
MIRT652513 TMEM109 transmembrane protein 109 2 2
MIRT652686 THUMPD3 THUMP domain containing 3 2 2
MIRT652772 TENM3 teneurin transmembrane protein 3 2 2
MIRT653160 SPRY4 sprouty RTK signaling antagonist 4 2 2
MIRT653765 SIX5 SIX homeobox 5 2 2
MIRT653792 SIRPA signal regulatory protein alpha 2 2
MIRT655649 OAZ2 ornithine decarboxylase antizyme 2 2 2
MIRT656263 MEX3A mex-3 RNA binding family member A 2 2
MIRT657044 KCNH6 potassium voltage-gated channel subfamily H member 6 2 2
MIRT657375 HMGA1 high mobility group AT-hook 1 2 2
MIRT657532 GTDC1 glycosyltransferase like domain containing 1 2 2
MIRT657542 GSTO2 glutathione S-transferase omega 2 2 2
MIRT657828 GJD3 gap junction protein delta 3 2 2
MIRT658946 DOK6 docking protein 6 2 2
MIRT660363 BACH2 BTB domain and CNC homolog 2 2 2
MIRT660406 ATXN7L3 ataxin 7 like 3 2 2
MIRT660948 ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 2 2
MIRT661031 AAK1 AP2 associated kinase 1 2 2
MIRT662435 RALGAPA1 Ral GTPase activating protein catalytic alpha subunit 1 2 2
MIRT668419 FAM217B family with sequence similarity 217 member B 2 2
MIRT669332 BSND barttin CLCNK type accessory beta subunit 2 2
MIRT676105 CLUAP1 clusterin associated protein 1 2 2
MIRT677084 SMIM15 small integral membrane protein 15 2 2
MIRT677127 OGFOD3 2-oxoglutarate and iron dependent oxygenase domain containing 3 2 2
MIRT678001 CPM carboxypeptidase M 2 2
MIRT678531 TMEM78 transmembrane protein 78 2 2
MIRT680000 ZNF860 zinc finger protein 860 2 2
MIRT680098 PXMP4 peroxisomal membrane protein 4 2 2
MIRT686795 SOX12 SRY-box 12 2 2
MIRT698887 SPTBN2 spectrin beta, non-erythrocytic 2 2 2
MIRT699371 SLC30A6 solute carrier family 30 member 6 2 2
MIRT702005 MIDN midnolin 2 2
MIRT708101 IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 2 2
MIRT709563 GYG2 glycogenin 2 2 2
MIRT710559 PPP2R5E protein phosphatase 2 regulatory subunit B'epsilon 2 2
MIRT710585 CDCA4 cell division cycle associated 4 2 2
MIRT710873 NT5DC1 5'-nucleotidase domain containing 1 2 2
MIRT711876 VASP vasodilator stimulated phosphoprotein 2 2
MIRT712226 RIMS3 regulating synaptic membrane exocytosis 3 2 2
MIRT713211 FAM13A family with sequence similarity 13 member A 2 2
MIRT713261 GPR55 G protein-coupled receptor 55 2 2
MIRT713327 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT713889 RNF19B ring finger protein 19B 2 2
MIRT714015 UBAP2L ubiquitin associated protein 2 like 2 2
MIRT714202 NLRP12 NLR family pyrin domain containing 12 2 2
MIRT714717 VPS8 VPS8, CORVET complex subunit 2 2
MIRT714748 ZNF385D zinc finger protein 385D 2 2
MIRT714806 ARHGEF19 Rho guanine nucleotide exchange factor 19 2 2
MIRT714852 ADAMTS17 ADAM metallopeptidase with thrombospondin type 1 motif 17 2 2
MIRT715717 MRPL4 mitochondrial ribosomal protein L4 2 2
MIRT715852 GRIN2A glutamate ionotropic receptor NMDA type subunit 2A 2 2
MIRT716853 MFSD12 major facilitator superfamily domain containing 12 2 2
MIRT717134 EBPL emopamil binding protein like 2 2
MIRT717248 TMEM246 transmembrane protein 246 2 2
MIRT717997 ZNF79 zinc finger protein 79 2 2
MIRT718341 PURA purine rich element binding protein A 2 2
MIRT719587 TFCP2L1 transcription factor CP2 like 1 2 2
MIRT720520 PTGR2 prostaglandin reductase 2 2 2
MIRT720671 SLC39A13 solute carrier family 39 member 13 2 2
MIRT721213 DCLK3 doublecortin like kinase 3 2 2
MIRT721757 INF2 inverted formin, FH2 and WH2 domain containing 2 2
MIRT721826 POU6F1 POU class 6 homeobox 1 2 2
MIRT722091 SUSD1 sushi domain containing 1 2 2
MIRT722275 LURAP1 leucine rich adaptor protein 1 2 2
MIRT722802 ARHGAP19 Rho GTPase activating protein 19 2 2
MIRT722866 FAM212B family with sequence similarity 212 member B 2 2
MIRT723113 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT724378 NEK8 NIMA related kinase 8 2 2
MIRT732775 PYCR1 pyrroline-5-carboxylate reductase 1 3 0
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-2355 Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-2355-5p Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-2355-5p Fluorouracil 3385 NSC19893 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-2355-5p Imatinib 5291 NSC743414 approved resistant High Chronic Myelogenous Leukemia cell line (K562)
hsa-miR-2355-5p Cisplatin 5460033 NSC119875 approved resistant High Non-Small Cell Lung Cancer cell line (A549, HCC827)
hsa-miR-2355-5p Gefitinib 123631 NSC715055 approved resistant High Non-Small Cell Lung Cancer cell line (A549, HCC827)
hsa-miR-2355-5p Temozolomide 5394 NSC362856 approved resistant High Glioma tissue
hsa-miR-2355-5p Osimertinib 71496458 NSC779217 approved sensitive cell line (HCC827)
hsa-miR-2355-5p Vemurafenib 42611257 NSC761431 approved resistant cell line (451Lu)
hsa-miR-2355-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-2355-5p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-2355-5p Tamoxifen+Fulvestrant sensitive cell line (LCC9)
hsa-miR-2355-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-2355-5p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-2355-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (TOV-112D)
hsa-miR-2355-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (OVSAHO)

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