pre-miRNA Information
pre-miRNA hsa-mir-2355   
Genomic Coordinates chr2: 207109987 - 207110073
Description Homo sapiens miR-2355 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-2355-5p
Sequence 11| AUCCCCAGAUACAAUGGACAA |31
Evidence Experimental
Experiments SOLiD
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 1 2 - 207110063 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1268296297 4 dbSNP
rs1361046879 5 dbSNP
rs1219551997 6 dbSNP
rs1295756820 12 dbSNP
rs1345273529 15 dbSNP
rs977145706 15 dbSNP
rs1209629984 20 dbSNP
rs759940260 21 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol KCNH6   
Synonyms ERG-2, ERG2, HERG2, Kv11.2, hERG-2
Description potassium voltage-gated channel subfamily H member 6
Transcript NM_030779   
Other Transcripts NM_173092   
Expression
Putative miRNA Targets on KCNH6
3'UTR of KCNH6
(miRNA target sites are highlighted)
>KCNH6|NM_030779|3'UTR
   1 ACTCCAAGATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGGTGCA
  81 GTGGCTCGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCAGACCATCCTGGCTAACACGGTGAAACCCCA
 161 CCTCTACTAAAATTAAAAAAGAAAAAAAATAGCCGGGCGTGGTGGCAGGCGCCTGTAATCCCAGCTACTGGGGAGGCTGA
 241 GGCAGGAGAATGGCATGAACCCGGGAGGTGGAGGTTGCAGGGAGCCGAGGCCGCACCACTGCACTCCAGCCTGGGTGACA
 321 GAGTGAGACTCCAACTCAAAAAAAAAAAAAAAAAAGATCTTGGGGAGGCAGACAGCCCCCCAGATGGGCCTCTCCTAAAG
 401 TAGCTACAAACTGCTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCACGACTTTTCCCAGCCTCCTCCAGGGC
 481 TCCATTTAAACAGCAAGCCTGGTGCAGGGTGGGAGAGTCTCAGGTGTGGAGGCAGCTTACAGGATTGAGGGGGCAGTGAA
 561 GAAAGAGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACCCTCCAGCACCTCATGGCTCAGCAC
 641 CAAGGCCCGGGGTTGGTCAGAACTCTTACCATGAGCCTCTGACCTGGCTGGAGATGGAGGTATGTTCTGTGGCAGACATG
 721 TCAGGACAGTCCTCCAGCCCTCTGCTCCTGATGGTTCTGTGACATTGGGTCTCTTGAGGGCAGTGGAGTGTCACACAGCT
 801 AATAAAGTACACATTTCATGTTGGAC
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' aacAGGUAACAUAGACCCCUa 5'
             |||    || ||||||| 
Target 5' taaTCCCAGCTA-CTGGGGAg 3'
216 - 235 145.00 -14.20
2
miRNA  3' aaCAGGUAACAUA-GACCCCUa 5'
            ||: |  | || :|||||| 
Target 5' gaGTTAA--GGATCTTGGGGAg 3'
48 - 67 131.00 -12.00
3
miRNA  3' aacagguaacaUA-GACCCCUa 5'
                     || :|||||| 
Target 5' aaaaaaaaaagATCTTGGGGAg 3'
346 - 367 126.00 -11.00
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31581051 15 COSMIC
COSN30178157 17 COSMIC
COSN30478554 27 COSMIC
COSN30457040 39 COSMIC
COSN30531264 50 COSMIC
COSN30505286 74 COSMIC
COSN31574750 75 COSMIC
COSN30179530 84 COSMIC
COSN5841668 97 COSMIC
COSN30526330 103 COSMIC
COSN2534679 126 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs749892643 3 dbSNP
rs761736789 4 dbSNP
rs368568960 6 dbSNP
rs769781378 8 dbSNP
rs1212553696 11 dbSNP
rs758124328 17 dbSNP
rs562375761 20 dbSNP
rs1490529798 23 dbSNP
rs1044525900 25 dbSNP
rs1225086557 27 dbSNP
rs751238196 28 dbSNP
rs1451407928 32 dbSNP
rs1259927565 36 dbSNP
rs1248148162 40 dbSNP
rs755413613 46 dbSNP
rs773218837 47 dbSNP
rs201123278 48 dbSNP
rs1275209202 49 dbSNP
rs35109099 62 dbSNP
rs951808872 67 dbSNP
rs905939792 70 dbSNP
rs1206786098 72 dbSNP
rs541293530 74 dbSNP
rs984327289 75 dbSNP
rs1329995646 77 dbSNP
rs372548332 79 dbSNP
rs1465550327 82 dbSNP
rs1002883922 87 dbSNP
rs1446555880 88 dbSNP
rs141118688 89 dbSNP
rs897428964 92 dbSNP
rs1248605341 93 dbSNP
rs1192551722 99 dbSNP
rs1182752965 100 dbSNP
rs1176101619 102 dbSNP
rs1413201007 103 dbSNP
rs548223874 116 dbSNP
rs1279116125 117 dbSNP
rs922642202 121 dbSNP
rs1241141737 122 dbSNP
rs928673827 125 dbSNP
rs1442169799 126 dbSNP
rs952932856 132 dbSNP
rs892585492 139 dbSNP
rs1007464488 149 dbSNP
rs1375148550 150 dbSNP
rs946797629 156 dbSNP
rs1405516320 158 dbSNP
rs1324964667 162 dbSNP
rs1043551889 166 dbSNP
rs1381682792 168 dbSNP
rs765380317 177 dbSNP
rs750744657 179 dbSNP
rs1403982655 182 dbSNP
rs964393187 185 dbSNP
rs1256522006 193 dbSNP
rs975721548 195 dbSNP
rs958946464 196 dbSNP
rs955887770 198 dbSNP
rs1223310724 199 dbSNP
rs988770984 200 dbSNP
rs1286470308 202 dbSNP
rs1356967531 204 dbSNP
rs1035317860 208 dbSNP
rs914471054 211 dbSNP
rs1292143759 212 dbSNP
rs896389305 213 dbSNP
rs993591799 225 dbSNP
rs1315730770 236 dbSNP
rs1399632063 240 dbSNP
rs1413804552 242 dbSNP
rs1199023054 247 dbSNP
rs1416946313 252 dbSNP
rs1194156179 254 dbSNP
rs375670494 258 dbSNP
rs1261316399 262 dbSNP
rs947275892 263 dbSNP
rs1044218722 264 dbSNP
rs189641576 275 dbSNP
rs1363664356 276 dbSNP
rs549862181 281 dbSNP
rs1279350099 282 dbSNP
rs1005941122 283 dbSNP
rs756314534 288 dbSNP
rs1338829259 293 dbSNP
rs897182842 295 dbSNP
rs1429587955 300 dbSNP
rs1017115667 307 dbSNP
rs1423576817 313 dbSNP
rs1308316473 314 dbSNP
rs1393666359 316 dbSNP
rs1171227957 320 dbSNP
rs1372169977 322 dbSNP
rs1478682598 324 dbSNP
rs1417121050 326 dbSNP
rs1186209229 328 dbSNP
rs1478467274 331 dbSNP
rs1389392157 333 dbSNP
rs1306039539 335 dbSNP
rs1340939208 337 dbSNP
rs1219506873 338 dbSNP
rs1407176283 338 dbSNP
rs541924633 338 dbSNP
rs749069415 338 dbSNP
rs79018117 338 dbSNP
rs964183232 338 dbSNP
rs1246940854 340 dbSNP
rs1272711643 350 dbSNP
rs1213667171 353 dbSNP
rs1367899791 355 dbSNP
rs201515965 357 dbSNP
rs371153773 360 dbSNP
rs1369523343 362 dbSNP
rs529260026 363 dbSNP
rs990787917 367 dbSNP
rs888686951 369 dbSNP
rs1467106484 376 dbSNP
rs9890263 379 dbSNP
rs922867829 382 dbSNP
rs1427553639 386 dbSNP
rs568287554 390 dbSNP
rs1191925449 415 dbSNP
rs1453879718 424 dbSNP
rs369537788 438 dbSNP
rs534071054 439 dbSNP
rs1275705557 442 dbSNP
rs1479924869 449 dbSNP
rs74866806 456 dbSNP
rs1211287452 457 dbSNP
rs768586571 459 dbSNP
rs997251649 459 dbSNP
rs1280301714 494 dbSNP
rs1250289254 507 dbSNP
rs1030021229 510 dbSNP
rs1190277224 524 dbSNP
rs570616150 525 dbSNP
rs539585851 526 dbSNP
rs1309327483 528 dbSNP
rs1448961561 549 dbSNP
rs1371135031 551 dbSNP
rs1297490057 555 dbSNP
rs1448505237 568 dbSNP
rs1360619129 576 dbSNP
rs1382835510 577 dbSNP
rs753885212 582 dbSNP
rs955773864 584 dbSNP
rs988875095 590 dbSNP
rs1021550534 591 dbSNP
rs913871461 597 dbSNP
rs1391570580 598 dbSNP
rs747339230 602 dbSNP
rs1297354357 605 dbSNP
rs181630678 609 dbSNP
rs927082026 620 dbSNP
rs1397691303 623 dbSNP
rs1182883610 638 dbSNP
rs1484481160 647 dbSNP
rs558783444 649 dbSNP
rs1380673181 650 dbSNP
rs938481634 653 dbSNP
rs930510015 667 dbSNP
rs992935567 678 dbSNP
rs1286239750 680 dbSNP
rs1241714666 697 dbSNP
rs926469060 701 dbSNP
rs1298445109 709 dbSNP
rs1306214189 719 dbSNP
rs41315068 720 dbSNP
rs1310825815 735 dbSNP
rs1413895191 741 dbSNP
rs930025472 747 dbSNP
rs1361432242 749 dbSNP
rs1300206834 766 dbSNP
rs748558968 767 dbSNP
rs1166640659 768 dbSNP
rs1225565098 775 dbSNP
rs576164481 795 dbSNP
rs1056279345 800 dbSNP
rs896431461 808 dbSNP
rs1416199131 812 dbSNP
rs1488794209 823 dbSNP
rs534818308 824 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084065. RNA binding protein: AGO2. Condition:CLIP_emetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' aacagguaacAUAGACCCCUa 5'
                    || ||||||| 
Target 5' ----------UA-CUGGGGAg 3'
1 - 10
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084065
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_emetine_AbnovaAb
Location of target site ENST00000583023.1 | 3UTR | UACUGGGGAGGCUGAGGCAGGAGAAUGGC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
CHOL -0.576 0.05 -0.600 0.04 9 Click to see details
ESCA 0.469 0.07 0.309 0.18 11 Click to see details
KIRP 0.217 0.12 0.192 0.15 32 Click to see details
THCA -0.138 0.15 -0.141 0.14 59 Click to see details
LIHC -0.148 0.16 -0.241 0.05 49 Click to see details
CESC -0.792 0.21 -0.625 0.29 3 Click to see details
LUAD 0.254 0.21 0.119 0.36 12 Click to see details
HNSC 0.125 0.22 0.153 0.17 42 Click to see details
KIRC 0.097 0.22 0.087 0.24 68 Click to see details
BRCA -0.08 0.23 -0.057 0.3 84 Click to see details
STAD 0.131 0.24 0.062 0.37 32 Click to see details
PRAD 0.102 0.24 0.117 0.21 50 Click to see details
PCPG 0.674 0.26 0.500 0.33 3 Click to see details
PAAD -0.305 0.35 -0.400 0.3 4 Click to see details
UCEC 0.095 0.35 0.023 0.46 19 Click to see details
KICH 0.075 0.36 0.083 0.35 25 Click to see details
LUSC -0.058 0.36 -0.090 0.3 38 Click to see details
BLCA 0.065 0.4 0.199 0.21 18 Click to see details
BLCA 0.065 0.4 0.199 0.21 18 Click to see details
164 hsa-miR-2355-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT190653 PABPN1 poly(A) binding protein nuclear 1 2 2
MIRT286477 TAOK1 TAO kinase 1 2 4
MIRT318993 GIGYF1 GRB10 interacting GYF protein 1 2 2
MIRT345622 DCAF7 DDB1 and CUL4 associated factor 7 2 4
MIRT442513 SYT7 synaptotagmin 7 2 4
MIRT444247 CTNND1 catenin delta 1 2 2
MIRT444780 ECE1 endothelin converting enzyme 1 2 2
MIRT456525 TMEM63A transmembrane protein 63A 2 2
MIRT468960 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT469834 R3HDM4 R3H domain containing 4 2 2
MIRT470027 PTP4A1 protein tyrosine phosphatase type IVA, member 1 2 2
MIRT471167 PHB2 prohibitin 2 2 2
MIRT475819 HDGF heparin binding growth factor 2 4
MIRT479389 CDKN1B cyclin dependent kinase inhibitor 1B 2 6
MIRT481747 APH1A aph-1 homolog A, gamma-secretase subunit 2 2
MIRT485220 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT487259 CCNF cyclin F 2 2
MIRT489971 MCC mutated in colorectal cancers 2 4
MIRT491399 C1D C1D nuclear receptor corepressor 2 2
MIRT494959 CCDC144A coiled-coil domain containing 144A 2 4
MIRT494979 PPP5D1 PPP5 tetratricopeptide repeat domain containing 1 2 2
MIRT495225 CHST14 carbohydrate sulfotransferase 14 2 2
MIRT496550 TBX15 T-box 15 2 2
MIRT501612 PISD phosphatidylserine decarboxylase 2 2
MIRT509393 TRIM24 tripartite motif containing 24 2 2
MIRT519616 ZNF788 zinc finger family member 788 2 4
MIRT519738 ZNF394 zinc finger protein 394 2 4
MIRT521230 SAR1A secretion associated Ras related GTPase 1A 2 4
MIRT521801 POM121C POM121 transmembrane nucleoporin C 2 2
MIRT526233 C2orf15 chromosome 2 open reading frame 15 2 2
MIRT526932 CMSS1 cms1 ribosomal small subunit homolog (yeast) 2 2
MIRT529189 ACBD7 acyl-CoA binding domain containing 7 2 2
MIRT529329 ZNF649 zinc finger protein 649 2 2
MIRT529698 MRPL30 mitochondrial ribosomal protein L30 2 2
MIRT529921 TOP1MT DNA topoisomerase I mitochondrial 2 2
MIRT530032 SMC1A structural maintenance of chromosomes 1A 2 2
MIRT530898 C9orf3 chromosome 9 open reading frame 3 2 2
MIRT531621 TM4SF5 transmembrane 4 L six family member 5 2 4
MIRT533132 XIAP X-linked inhibitor of apoptosis 2 2
MIRT533210 WAPAL WAPL cohesin release factor 2 2
MIRT534058 ST6GALNAC3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 2 2
MIRT535487 PARVB parvin beta 2 2
MIRT536749 HOXD9 homeobox D9 2 2
MIRT551456 CARKD NAD(P)HX dehydratase 2 2
MIRT551858 ASB6 ankyrin repeat and SOCS box containing 6 2 2
MIRT552095 FAM8A1 family with sequence similarity 8 member A1 2 2
MIRT552332 ZNF704 zinc finger protein 704 2 2
MIRT552549 ZFP36L2 ZFP36 ring finger protein like 2 2 2
MIRT561505 SRSF2 serine and arginine rich splicing factor 2 2 2
MIRT562702 ZNF415 zinc finger protein 415 2 2
MIRT563052 ZNF138 zinc finger protein 138 2 2
MIRT564592 ZNF791 zinc finger protein 791 2 2
MIRT566422 PIGA phosphatidylinositol glycan anchor biosynthesis class A 2 2
MIRT570176 RCBTB1 RCC1 and BTB domain containing protein 1 2 2
MIRT570866 ZNF525 zinc finger protein 525 2 2
MIRT570875 ZFP1 ZFP1 zinc finger protein 2 2
MIRT571517 ZNF625 zinc finger protein 625 2 2
MIRT572551 DKK3 dickkopf WNT signaling pathway inhibitor 3 2 2
MIRT610894 HINFP histone H4 transcription factor 2 2
MIRT611037 PTGES prostaglandin E synthase 2 2
MIRT611479 HSPA4 heat shock protein family A (Hsp70) member 4 2 4
MIRT612419 SP1 Sp1 transcription factor 2 2
MIRT614478 FRMPD3 FERM and PDZ domain containing 3 2 2
MIRT616318 CACNA1A calcium voltage-gated channel subunit alpha1 A 2 2
MIRT616929 ZNF638 zinc finger protein 638 2 2
MIRT618131 GABARAPL3 GABA type A receptor associated protein like 3 pseudogene 2 2
MIRT618452 ZFP30 ZFP30 zinc finger protein 2 4
MIRT620671 BBS5 Bardet-Biedl syndrome 5 2 2
MIRT620713 ASB16 ankyrin repeat and SOCS box containing 16 2 2
MIRT621126 EMC7 ER membrane protein complex subunit 7 2 4
MIRT621443 TOMM22 translocase of outer mitochondrial membrane 22 2 2
MIRT623491 KCTD11 potassium channel tetramerization domain containing 11 2 2
MIRT623783 GOSR1 golgi SNAP receptor complex member 1 2 2
MIRT623918 FNBP1L formin binding protein 1 like 2 2
MIRT625723 CXorf38 chromosome X open reading frame 38 2 2
MIRT625778 GCNT1 glucosaminyl (N-acetyl) transferase 1, core 2 2 2
MIRT626940 TTR transthyretin 2 2
MIRT627357 TSC22D2 TSC22 domain family member 2 2 2
MIRT632078 ALDH1A2 aldehyde dehydrogenase 1 family member A2 2 2
MIRT633361 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT639793 MVK mevalonate kinase 2 2
MIRT643761 NAGK N-acetylglucosamine kinase 2 2
MIRT644358 NDUFAF6 NADH:ubiquinone oxidoreductase complex assembly factor 6 2 2
MIRT645558 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT646588 ANKRD36 ankyrin repeat domain 36 2 2
MIRT646631 SLC25A46 solute carrier family 25 member 46 2 2
MIRT648066 HSPA6 heat shock protein family A (Hsp70) member 6 2 2
MIRT648142 SUCLG2 succinate-CoA ligase GDP-forming beta subunit 2 2
MIRT648416 MYOZ3 myozenin 3 2 2
MIRT649218 AMMECR1L AMMECR1 like 2 2
MIRT649772 MRPS27 mitochondrial ribosomal protein S27 2 4
MIRT650510 UFM1 ubiquitin fold modifier 1 2 2
MIRT651007 ZNF740 zinc finger protein 740 2 2
MIRT651524 WNT2B Wnt family member 2B 2 2
MIRT652014 TTYH3 tweety family member 3 2 2
MIRT652513 TMEM109 transmembrane protein 109 2 2
MIRT652686 THUMPD3 THUMP domain containing 3 2 2
MIRT652772 TENM3 teneurin transmembrane protein 3 2 2
MIRT653160 SPRY4 sprouty RTK signaling antagonist 4 2 2
MIRT653765 SIX5 SIX homeobox 5 2 2
MIRT653792 SIRPA signal regulatory protein alpha 2 2
MIRT655649 OAZ2 ornithine decarboxylase antizyme 2 2 2
MIRT656263 MEX3A mex-3 RNA binding family member A 2 2
MIRT657044 KCNH6 potassium voltage-gated channel subfamily H member 6 2 2
MIRT657375 HMGA1 high mobility group AT-hook 1 2 2
MIRT657532 GTDC1 glycosyltransferase like domain containing 1 2 2
MIRT657542 GSTO2 glutathione S-transferase omega 2 2 2
MIRT657828 GJD3 gap junction protein delta 3 2 2
MIRT658946 DOK6 docking protein 6 2 2
MIRT660363 BACH2 BTB domain and CNC homolog 2 2 2
MIRT660406 ATXN7L3 ataxin 7 like 3 2 2
MIRT660948 ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 2 2
MIRT661031 AAK1 AP2 associated kinase 1 2 2
MIRT662435 RALGAPA1 Ral GTPase activating protein catalytic alpha subunit 1 2 2
MIRT668419 FAM217B family with sequence similarity 217 member B 2 2
MIRT669332 BSND barttin CLCNK type accessory beta subunit 2 2
MIRT676105 CLUAP1 clusterin associated protein 1 2 2
MIRT677084 SMIM15 small integral membrane protein 15 2 2
MIRT677127 OGFOD3 2-oxoglutarate and iron dependent oxygenase domain containing 3 2 2
MIRT678001 CPM carboxypeptidase M 2 2
MIRT678531 TMEM78 transmembrane protein 78 2 2
MIRT680000 ZNF860 zinc finger protein 860 2 2
MIRT680098 PXMP4 peroxisomal membrane protein 4 2 2
MIRT686795 SOX12 SRY-box 12 2 2
MIRT698887 SPTBN2 spectrin beta, non-erythrocytic 2 2 2
MIRT699371 SLC30A6 solute carrier family 30 member 6 2 2
MIRT702005 MIDN midnolin 2 2
MIRT708101 IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 2 2
MIRT709563 GYG2 glycogenin 2 2 2
MIRT710559 PPP2R5E protein phosphatase 2 regulatory subunit B'epsilon 2 2
MIRT710585 CDCA4 cell division cycle associated 4 2 2
MIRT710873 NT5DC1 5'-nucleotidase domain containing 1 2 2
MIRT711876 VASP vasodilator stimulated phosphoprotein 2 2
MIRT712226 RIMS3 regulating synaptic membrane exocytosis 3 2 2
MIRT713211 FAM13A family with sequence similarity 13 member A 2 2
MIRT713261 GPR55 G protein-coupled receptor 55 2 2
MIRT713327 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT713889 RNF19B ring finger protein 19B 2 2
MIRT714015 UBAP2L ubiquitin associated protein 2 like 2 2
MIRT714202 NLRP12 NLR family pyrin domain containing 12 2 2
MIRT714717 VPS8 VPS8, CORVET complex subunit 2 2
MIRT714748 ZNF385D zinc finger protein 385D 2 2
MIRT714806 ARHGEF19 Rho guanine nucleotide exchange factor 19 2 2
MIRT714852 ADAMTS17 ADAM metallopeptidase with thrombospondin type 1 motif 17 2 2
MIRT715717 MRPL4 mitochondrial ribosomal protein L4 2 2
MIRT715852 GRIN2A glutamate ionotropic receptor NMDA type subunit 2A 2 2
MIRT716853 MFSD12 major facilitator superfamily domain containing 12 2 2
MIRT717134 EBPL emopamil binding protein like 2 2
MIRT717248 TMEM246 transmembrane protein 246 2 2
MIRT717997 ZNF79 zinc finger protein 79 2 2
MIRT718341 PURA purine rich element binding protein A 2 2
MIRT719587 TFCP2L1 transcription factor CP2 like 1 2 2
MIRT720520 PTGR2 prostaglandin reductase 2 2 2
MIRT720671 SLC39A13 solute carrier family 39 member 13 2 2
MIRT721213 DCLK3 doublecortin like kinase 3 2 2
MIRT721757 INF2 inverted formin, FH2 and WH2 domain containing 2 2
MIRT721826 POU6F1 POU class 6 homeobox 1 2 2
MIRT722091 SUSD1 sushi domain containing 1 2 2
MIRT722275 LURAP1 leucine rich adaptor protein 1 2 2
MIRT722802 ARHGAP19 Rho GTPase activating protein 19 2 2
MIRT722866 FAM212B family with sequence similarity 212 member B 2 2
MIRT723113 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT724378 NEK8 NIMA related kinase 8 2 2
MIRT732775 PYCR1 pyrroline-5-carboxylate reductase 1 3 0
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-2355 Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-2355-5p Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-2355-5p Fluorouracil 3385 NSC19893 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-2355-5p Imatinib 5291 NSC743414 approved resistant High Chronic Myelogenous Leukemia cell line (K562)
hsa-miR-2355-5p Cisplatin 5460033 NSC119875 approved resistant High Non-Small Cell Lung Cancer cell line (A549, HCC827)
hsa-miR-2355-5p Gefitinib 123631 NSC715055 approved resistant High Non-Small Cell Lung Cancer cell line (A549, HCC827)
hsa-miR-2355-5p Temozolomide 5394 NSC362856 approved resistant High Glioma tissue
hsa-miR-2355-5p Osimertinib 71496458 NSC779217 approved sensitive cell line (HCC827)
hsa-miR-2355-5p Vemurafenib 42611257 NSC761431 approved resistant cell line (451Lu)
hsa-miR-2355-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-2355-5p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-2355-5p Tamoxifen+Fulvestrant sensitive cell line (LCC9)
hsa-miR-2355-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-2355-5p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-2355-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (TOV-112D)
hsa-miR-2355-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (OVSAHO)

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