miRTarBase - #MIRT657112


—
pre-miRNA Information
pre-miRNA hsa-mir-4680   
Genomic Coordinates chr10: 110898090 - 110898155
Description Homo sapiens miR-4680 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4680-5p
Sequence 5| AGAACUCUUGCAGUCUUAGAUGU |27
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1274530692 2 dbSNP
rs780271274 5 dbSNP
rs1461423681 7 dbSNP
rs749729920 8 dbSNP
rs1252920446 10 dbSNP
rs201739274 11 dbSNP
rs774971106 19 dbSNP
rs748132091 22 dbSNP
rs773643180 22 dbSNP
rs1235425484 23 dbSNP
Putative Targets

Gene Information
Gene Symbol ITPRIPL2   
Synonyms -
Description inositol 1,4,5-trisphosphate receptor interacting protein like 2
Transcript NM_001034841   
Expression
Putative miRNA Targets on ITPRIPL2
3'UTR of ITPRIPL2
(miRNA target sites are highlighted)		 
>ITPRIPL2|NM_001034841|3'UTR
   1 ACCCTGACAGCACCCCCACCTGACCAAATGCTCCTAAAGCCTTTCCCACTGGGTGGGGGTGGGAATGGCGGTGAAGCCAG
  81 TTAAATGCAAGATTGCAGAAGGCATTGGAAAATTTGGTGGCTGCCACAAGCTTTAGTGGCTTAAATATCACCTTCTCGCT
 161 TCACAGTCCAGTATAATATGACATCTTCACACCCACTAGAGTGTCCTGGGCAAACCATGGGAAGACATCCAACAGGAGAC
 241 CCAAGAATTGGTTCAAATATTGTTCTGTGTAGACGGATTCTGTAGAAGGATGTGGCTTTTAGAGAAGTCCAGTAGAAGAA
 321 GCAAGAACTAGCTGCAGGGAAAGTTCCTTCTGTCGGTTTTTAGACACAGATCTCTCTGCCCAAATTAAAAAAAAACAAAA
 401 CAAAACACTAAAGTTTTTGACACAATTACTTGCTAGGTACTGGGTTCCTGATTGTCTTTAAAAAGAAAAATCTGAATCTT
 481 TATTTGCAACTGGAATTGAAGTTCTATTTTAGGGGCTAATGTTTAGAGGAACATAATTTCCACTGTTCAAATTAATATTA
 561 ATGTATTTTTAAAATGGTGCAATCACAGGTGTTTGACAAGATTGTCAACAAGTTAAGTCACATAGATGGAAAGGCAATCG
 641 AGAGTTGGTTAGAGAAGCTTCCAGAGAAAATAGCACTTTATATTGATCAATTCACTCATTTTGTGGTAATTGCTAGCACC
 721 AAGCATTGCATCTGAAAGGGAAGCCAGTTATATTTATTATTAAATGTACAACCTTGAAAAGCAGCCAGCATGCTTGCCTA
 801 ACTAACATCGCCGCAGGCCACAAGCTGGGATATGTACCTGTCCGTCAACATCCATTCATTAAACTACCTACTACCAGCCA
 881 GAGATGTCTGGAACCAAAGTAGCAACCAAATACATATTCAAGACAACACTGGTGAAGGCATAAAACATGTTGGCTTTGGA
 961 GAAAGATGTGTTTTAGGCTTTGCCTGTAAAGGTGTTTCTCCAAGGCTGGCTGCTGGCTGGAGACAGAAAACTTTTTTGTT
1041 TTAAGGTTTTTAGCAAACTCCTTCACAAAGAGATTTCTTTCTGAGCTTAATGAGCTAATGAAGAGGAAATGCCTGCTGCT
1121 TAGCATGTGGTTTGTGCTGGGTCTCTAACCATTGATGGTTCTTCCTTGTCCAGGCAGTCTTACGTGGTCCAAGAGACCTG
1201 TTGATTCAGCACAGGTCTTGCAAAACATTTCACTTATAGTTCAGTATCTTGGGCTCTGTGCTTGAAGATCAGTTACTCCC
1281 TGGTCGTGGGCAGAGGAGACAAATTAGGAAAAGAGCAAGGGAGACAGCCCTTGACGGCAGTCTGTCTCTTTTCTCTTTAG
1361 GTGTCAGTATCACCAGGTTGGGTGTATTTTGCAGCTGGGAGGAGCCGGTCCTGGAATTCTTCCTTGTTCTCCCAAATTTA
1441 TAACAGTCCTCAATTGCAGTTTAAGTTCAGCATGGCCCCTCATCTGCTTGCCTGATTGGAAATGCAGCCAGTCCAAGTGT
1521 TACAAATTGGGATTTTTTTGTTTTCTAAATAAAAACATGTACTTCCTCAGACTCTTAAAGCTAAAATTTGGAAGACAGAA
1601 ATGCCTATGTGAATAGAATCATTGTTGAAGTTCTGAGCTCTTTTGAGGGAACTCTATAAGCCTTCTTTCTTTAGGGGATC
1681 CACTTGCCTGCTGTGGGAAATCATAGTGAGTGATTTACAGGAATCCTTCTCCTCCAAGCTGCATTGGCTTCTTATATCCT
1761 TTGCGACCTTGGGCTGAAAGAGAAACAGCTGCAAATGTTGTGCTGTCTCTTTGAGGTTGTCTTGGGGACAGTTCCCCGCA
1841 AAGGTCATTCCTAGCTTTTGAGGTCAATGTTGGGTCATAAGGTACTGCATTGTGCAAAGAAGTCAGTCTGCTAACTTTAT
1921 GCAAAGATAGAAACTGCACGGTATTTTTTAAAATTAGTTTTTAAAATAAATGCCAAGAGTAGATCTTATATATATATATA
2001 TGTATACATATTTTATATATATATATATTTCCATACTCAACCACAACTTCCTCTGTACTCATTGTTTACTACAGTGGGGG
2081 ACATCAAGGGTTGGAAGGATTATAAAGCTTTAAGGCTGGGCGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGC
2161 GAGGTGGGCGGATCACCTGAGGTCAGGAGTTCAAGACCAGCCTAGCCAACATAGTGAAACTCTGTCTCTACTAAAAAATA
2241 CAAAAATTAGCTGGGCGTGGTGGCGGGCGCCTGTAATCCCAGATACTCGGGAGGCTAAGGCAGGAGAATCACTTGAACCC
2321 GGGAGGTGAAGGTTGCAGAGAGCCAAGATCACACCACTGCACTCCAGCCTGGGTGACCGAGCGAGACTCCGTCTCAAAAA
2401 AAAAAAAAAAAAGCTTTAAAAAGCTGAATTTTAGAAATATTTCTAGCAGTGTCAGTGAGTTCCTCTTTTAATAGTGTTTT
2481 AAAGTATAAATCTGGTAACATACTGTTCTTGTAGTTTTTTGTTAGTTTTGTTTTTCAGGTTAATTACCCAAAGCCTCATC
2561 CATCCTCAAGGTTTTTAAATTTTATTTTTTTAAAATAAATTGTGCATTGTATTTGTGAATTTTTAAAATATTACTGTTTT
2641 ATTTAAATGCCATGCTGAGCAATTGTTCTCTGTACATGGTAACCAAAACTTAGAGATTTCGATCAATTTTGATCAATGTT
2721 TAGTAAACCAAAACATGTACTGTGTACAACGGAAATAATATGGCATATTAGCCAGGCATGATGGTTGCCCAAGACAGTTA
2801 AATTAAGCTCAATTCTGTATTTTATTAGGGCTCTGTTATGTCCTTCATCTGAAATGTACACATTTTTGGTGTATGCTTGG
2881 TACTGGAGATTCATATATGCAAATATTCTCATGCAAGAAGTTCCACAGTAACAACAGCAAAAAGAAAAAATTAGTTGTCC
2961 AGCCAGTGCTGGAGGAAAATGTTTCTGGGGAAGATGACTCAGTCATTTTGTGGCGAGACACCCTTTGGTAACTCCCACTG
3041 ACCAGTCTTGGGAGCCTTCCTGGAATGATCGTGGGCTGAGCGGAGATGTTTTTTGCAAAATGAAACTGAAGCTGAAAGAA
3121 AGGAGAATTCGAGTGAACCAAGAGAAATCCAAAGACCTGGGGAAGGAGGACTTAAGATGAAAGTGAAGCAAGAGAGGGAA
3201 GGGGAAATGAAGTGAAAATGGCGTGAGGGTGTGAGAGAGGTTTGGGTTAGGAAACATGTTTTTAGTGCTATTTCCAACCA
3281 GGGGTCGCAAACTCAGCAGCCTGTAGAAACAGGGGTGGGAGGTGGGGGGGAAGCTGTGCCCACCTTTAAAGAGGGGGCCA
3361 TTGCTCAGCCATGCAGAAAAAAATGGGGCAACAAGCTGGAAATCAGGTTTTTTTTTTTTAAAGTGAAACTTGATGATTTT
3441 TAAACAAGTAATTAAAAAAATGTCCAAAACACCATGTGGGCCAAACATTTGTTTGAGCCTGGGGGCCACCAGTTTGCGAC
3521 CACTGCCTTACGTAGTTAACACCCTGAGTATGTATACAGTCATATTTTTTGTTTTGGATATGGTAGTGTTATATATACTT
3601 GGGGGCGTGATATTTGAAGTCATCTTTATCTCTCAGAGTTAAGCTTTATTGTAGAAGAAAAAAAAAAAAGTTAACACAGC
3681 CATAGATAACACTTAACTCACAGTTCCCAGGAGGACACTTGATCTCGAAGCTGCTCTTTTTGAGTCAGATCCTACATCAA
3761 ACCACTTAGGGCCAGTTTTTGGCATTTCCTTCCTGGTGATTTGGGGTAAACTTCTTTGCTCTGTCGGAGTTTGCAGATGA
3841 GTAATCAGAAGGATTGCAGAATAACTTGTTTCTTTGTATTTTATTCTTACATTTAAATTAATTTTGGGGGGTTAGTGGTA
3921 TCCTAGCTCGTGCCTTTACAGGGATGATTGGTGGCTAGATTTGGGGTGCAAGCTTCTTAGGCTCATACCATTTCAACTAC
4001 CAAGAACACAGGTTTTTGTTTTTGTTTTTTGAGACAGGGTCTCAGTCTGTTGCCCAGGCTGGAGTGCAGTGGCAAGATTG
4081 CAGCTCATTGCAGCCTTGACCTCCTGGGCTCAAGCGATCCTCCTGCCTCGGCCTCCCAACTAGCTGGGACCACAGGTATG
4161 TGCCACTACACCCAGCGAATTTTTAAATTATTTGTAGAGTCAGGGTCTCCCTATGTTGCCCAGGCTGGTCTTGAACTACT
4241 GGACTCAAGCCATCCTCCCACCTCGGCCTCCCAAAGTGTTGGGATTATAGGCGCGAGCCACCACACCTGGCCTAAAAGCG
4321 TCGTTCTGATCAGACTTCACCCCTGAATGTTTCTATCATTTTCTTTTCTTTTTTTTTTTTTTTCGAGACAGAGTTTTGCT
4401 CTTGTTTTACAGGCTGGGGTGCGGTGGGATGATCTTGGCTCACTGCAATCTCCTCCTCCCAGGTTCAAGTGATTCTTGGG
4481 CCTTAGCCTCCCGAGTAGCTGGGATTACAGGCACCTGCCACCACGCCTGGCTAATATATATATATATATATATATATTTT
4561 TTTTTTTTTTTTTTAGTAGAGATGGGGTTTCATCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCTACC
4641 TGCCTCGGCCTCCCAAAGTGCAGGGATTACAGGTGTGAGTGAGCCACCGCGGCCGGCCTCTATCATTTTCTGACTCAGCA
4721 GCTCCACCAAAATTGACATCCTAGCAAACACTGTGAAGGAATTAACCTAAGTGCTTCCAGAGCATCTCATGTAACCTCTA
4801 TGGAGTAAGTCACTTTTTCTGTAACATGTGGCTTTTGACCTTGATGAAGACTTTGACTTCTCATCCCTGTCTACATGGAG
4881 GAAGATGATTCAGTGGTGGGGAAAATGAACCTCGGTAACATTTCCAATGTCCTTCAAGAGGGAAACAAGTTCAGTGTTAT
4961 CATCGTGGCATTCGTTAGTTTTTTTTTTTTTAAATCACTTGTTTAGATACAACTTTATTTTTTTATACCTACATAGCACA
5041 TGACTGGGGGGATAAAGCATGTATAAGTTGGGAGAGGGTAAAGAATGTGTGACTATGTATACAGAAAATAGACTAAAATG
5121 TGCAGCAAAATGATATATACTGTAATCTGGTTTTTGAAGTATCTACTATTCTGGAATATTGTTAAACAACTTTTTGCTTT
5201 TGAAAAAAAAAGGTGCCTTGATTCAGTTGCGTGACTTAGAACATTCATCCTATTTTATTGTGATTTTTAATGTCTTCTGA
5281 CCCCAAACTGTGTTTTTGGTTGCAGTCTGGCGGCTGCAGGCATAGCGTCGGTTTTGTTCCAATAACAGAGACCAAAGAGT
5361 TAATCAGATATGGTTCAGCTGCTACAATTGTATGATTCAAAGGCAATTTAATCACCCCAAATTTCCATGGCCCCCACAGT
5441 CAAGACCTGCCATTCGTTTTCTCTTGCAGGTTGGAGTAAATTTGCACTTTGAATCATGTGGGTCATTTGGGGACCTTGTT
5521 CTTTTCTATTTTGCTTTATTAATAAAGGAACTTGTAGAAACAAAAAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' ugUAGAUUCUGACGUUCUCAAGa 5'
            | ||:||::  ||:|||||| 
Target 5' tcACCTGAGGT--CAGGAGTTCa 3'
 2173 - 2193 149.00 -17.10
2 
miRNA  3' ugUAGAUUCUGACG-UUCUCAAga 5'
            | | :||||  | |||||||  
Target 5' atAACAGAGAC--CAAAGAGTTaa 3'
 5342 - 5363 137.00 -11.40
3 
miRNA  3' uguagaUUCUG--ACGUUCUCAAga 5'
                |||:|  | |:||||||  
Target 5' gatggaAAGGCAAT-CGAGAGTTgg 3'
 625 - 648 134.00 -11.70
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN26980807 3 COSMIC
COSN30537914 13 COSMIC
COSN30473282 16 COSMIC
COSN30139410 22 COSMIC
COSN31493414 26 COSMIC
COSN30473567 42 COSMIC
COSN31493374 48 COSMIC
COSN30710910 70 COSMIC
COSN24294743 125 COSMIC
COSN30158219 156 COSMIC
COSN26669519 335 COSMIC
COSN1694338 367 COSMIC
COSN30539321 441 COSMIC
COSN30136540 479 COSMIC
COSN30116873 535 COSMIC
COSN26585000 601 COSMIC
COSN31569254 669 COSMIC
COSN6081086 688 COSMIC
COSN31537215 704 COSMIC
COSN19661975 751 COSMIC
COSN30121539 759 COSMIC
COSN21472573 808 COSMIC
COSN26577006 845 COSMIC
COSN26552356 962 COSMIC
COSN30141849 966 COSMIC
COSN15624610 1065 COSMIC
COSN15624611 1165 COSMIC
COSN30122173 1329 COSMIC
COSN31594639 1365 COSMIC
COSN1183886 1413 COSMIC
COSN30118751 1420 COSMIC
COSN28742962 1575 COSMIC
COSN4764687 1577 COSMIC
COSN30126015 1737 COSMIC
COSN26562897 1801 COSMIC
COSN30111902 1810 COSMIC
COSN15661873 1897 COSMIC
COSN30531453 1945 COSMIC
COSN17183101 2014 COSMIC
COSN28475564 2028 COSMIC
COSN15624612 2052 COSMIC
COSN31549340 2052 COSMIC
COSN31536825 2069 COSMIC
COSN31555156 2121 COSMIC
COSN28646329 2123 COSMIC
COSN28646353 2124 COSMIC
COSN20226785 2160 COSMIC
COSN8230158 2170 COSMIC
COSN30163465 2252 COSMIC
COSN31593317 2265 COSMIC
COSN31532492 2290 COSMIC
COSN30163462 2340 COSMIC
COSN20112712 2413 COSMIC
COSN1694339 2487 COSMIC
COSN15624613 2531 COSMIC
COSN28190963 2553 COSMIC
COSN15624614 2565 COSMIC
COSN30129210 2593 COSMIC
COSN31522462 2597 COSMIC
COSN2455869 2599 COSMIC
COSN4904866 2625 COSMIC
COSN31524231 2633 COSMIC
COSN7300307 2664 COSMIC
COSN31606645 2701 COSMIC
COSN26567629 2719 COSMIC
COSN19590000 2809 COSMIC
COSN26958018 2866 COSMIC
COSN31480791 2909 COSMIC
COSN30132821 2951 COSMIC
COSN31522455 3004 COSMIC
COSN30128502 3043 COSMIC
COSN30125079 3115 COSMIC
COSN31545592 3115 COSMIC
COSN31485008 3131 COSMIC
COSN30123037 3201 COSMIC
COSN30116710 3223 COSMIC
COSN26552357 3230 COSMIC
COSN25118064 3239 COSMIC
COSN30135996 3331 COSMIC
COSN16703728 3361 COSMIC
COSN217015 3385 COSMIC
COSN217016 3386 COSMIC
COSN15624615 3388 COSMIC
COSN30125058 3420 COSMIC
COSN31585367 3449 COSMIC
COSN30125465 3455 COSMIC
COSN15624616 3473 COSMIC
COSN26641118 3479 COSMIC
COSN29493350 3577 COSMIC
COSN31518460 3607 COSMIC
COSN32150638 3678 COSMIC
COSN27296027 3766 COSMIC
COSN30142026 3873 COSMIC
COSN30120184 3930 COSMIC
COSN29468451 3943 COSMIC
COSN31607139 4005 COSMIC
COSN26505353 4019 COSMIC
COSN26507820 4025 COSMIC
COSN28652431 4045 COSMIC
COSN28129110 4059 COSMIC
COSN31556497 4070 COSMIC
COSN30112725 4241 COSMIC
COSN7300308 4266 COSMIC
COSN26451679 4295 COSMIC
COSN30164572 4346 COSMIC
COSN30538078 4364 COSMIC
COSN30114624 4382 COSMIC
COSN30125151 4445 COSMIC
COSN30530275 4462 COSMIC
COSN27819847 4531 COSMIC
COSN30533837 4689 COSMIC
COSN30120875 4690 COSMIC
COSN15624617 4766 COSMIC
COSN30512617 4920 COSMIC
COSN19657737 4992 COSMIC
COSN26557888 4993 COSMIC
COSN30128778 5011 COSMIC
COSN26557683 5051 COSMIC
COSN15624618 5052 COSMIC
COSN31531087 5140 COSMIC
COSN26506251 5143 COSMIC
COSN30532466 5160 COSMIC
COSN29567005 5212 COSMIC
COSN1694340 5232 COSMIC
COSN30539538 5249 COSMIC
COSN30143319 5308 COSMIC
COSN30122393 5327 COSMIC
COSN15624619 5414 COSMIC
COSN23012601 5436 COSMIC
COSN31611205 5447 COSMIC
COSN26556565 5457 COSMIC
COSN16132133 5492 COSMIC
COSN17887037 5559 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs757525143 2 dbSNP
rs1436555858 9 dbSNP
rs1199557050 10 dbSNP
rs779240746 13 dbSNP
rs1348517181 14 dbSNP
rs1227740037 15 dbSNP
rs1334422759 16 dbSNP
rs368594072 17 dbSNP
rs1330969517 18 dbSNP
rs988610190 20 dbSNP
rs771055947 21 dbSNP
rs984435893 25 dbSNP
rs575539413 31 dbSNP
rs1306887934 35 dbSNP
rs759458241 42 dbSNP
rs915089788 47 dbSNP
rs1374056291 51 dbSNP
rs113868503 52 dbSNP
rs1447076308 55 dbSNP
rs756659220 56 dbSNP
rs1291633369 66 dbSNP
rs1459234168 70 dbSNP
rs986014398 71 dbSNP
rs910467919 74 dbSNP
rs878905120 77 dbSNP
rs944398515 78 dbSNP
rs1369032002 89 dbSNP
rs538289210 92 dbSNP
rs1040020997 103 dbSNP
rs1399561736 109 dbSNP
rs927669712 125 dbSNP
rs147818285 126 dbSNP
rs1212058470 131 dbSNP
rs1364886908 132 dbSNP
rs1488993879 138 dbSNP
rs1260463064 140 dbSNP
rs929084283 150 dbSNP
rs1356396665 152 dbSNP
rs141264892 159 dbSNP
rs747681485 166 dbSNP
rs1240232978 171 dbSNP
rs1330207609 172 dbSNP
rs80201779 176 dbSNP
rs181221487 189 dbSNP
rs1023926491 202 dbSNP
rs1254512545 203 dbSNP
rs1391220019 206 dbSNP
rs1297294599 227 dbSNP
rs1362376317 231 dbSNP
rs1159390877 235 dbSNP
rs1477727474 237 dbSNP
rs1376174118 239 dbSNP
rs905433021 242 dbSNP
rs537956556 243 dbSNP
rs934809144 246 dbSNP
rs1204520754 248 dbSNP
rs1261485736 255 dbSNP
rs1263571945 259 dbSNP
rs777489738 260 dbSNP
rs776781848 262 dbSNP
rs1035047511 268 dbSNP
rs1041180366 284 dbSNP
rs577303279 286 dbSNP
rs1428628093 289 dbSNP
rs1343630947 291 dbSNP
rs988193157 296 dbSNP
rs1253697534 297 dbSNP
rs1234981498 303 dbSNP
rs1331261178 306 dbSNP
rs997335498 307 dbSNP
rs541183178 320 dbSNP
rs888409940 328 dbSNP
rs1481238586 329 dbSNP
rs967894547 330 dbSNP
rs1413797629 341 dbSNP
rs1400184491 343 dbSNP
rs1176704037 351 dbSNP
rs1388442537 356 dbSNP
rs985920565 358 dbSNP
rs1455921944 366 dbSNP
rs910482030 370 dbSNP
rs1015496287 375 dbSNP
rs961213684 377 dbSNP
rs1187899540 387 dbSNP
rs3840049 387 dbSNP
rs1275903709 388 dbSNP
rs1201672461 391 dbSNP
rs1386258406 391 dbSNP
rs549553204 392 dbSNP
rs559771171 392 dbSNP
rs1299345919 396 dbSNP
rs976375109 397 dbSNP
rs186185424 407 dbSNP
rs1224424270 426 dbSNP
rs928922669 429 dbSNP
rs1048879145 435 dbSNP
rs887515860 439 dbSNP
rs1336316845 440 dbSNP
rs1396663020 459 dbSNP
rs941536917 466 dbSNP
rs755868700 473 dbSNP
rs1328232256 486 dbSNP
rs1236565339 499 dbSNP
rs1399899697 500 dbSNP
rs1168750038 516 dbSNP
rs1467337271 519 dbSNP
rs1162971789 520 dbSNP
rs748920840 520 dbSNP
rs1472136059 521 dbSNP
rs1486182384 529 dbSNP
rs1189078616 530 dbSNP
rs1045240536 533 dbSNP
rs1461354417 535 dbSNP
rs1236992890 544 dbSNP
rs905337558 546 dbSNP
rs1003814167 551 dbSNP
rs576979194 553 dbSNP
rs990970186 555 dbSNP
rs1458774813 558 dbSNP
rs1266237702 561 dbSNP
rs1258470106 565 dbSNP
rs1490694395 566 dbSNP
rs776386677 566 dbSNP
rs1035647119 571 dbSNP
rs1199717274 589 dbSNP
rs1354231377 598 dbSNP
rs1365337095 601 dbSNP
rs1410677853 602 dbSNP
rs1417732311 603 dbSNP
rs914922125 605 dbSNP
rs968081591 606 dbSNP
rs1401301070 625 dbSNP
rs548333804 634 dbSNP
rs563678850 640 dbSNP
rs879099961 641 dbSNP
rs188944355 644 dbSNP
rs1281380026 645 dbSNP
rs1416644131 648 dbSNP
rs934894163 655 dbSNP
rs1439571092 657 dbSNP
rs3210530 658 dbSNP
rs922752976 662 dbSNP
rs932758867 670 dbSNP
rs1233084480 672 dbSNP
rs1022371560 676 dbSNP
rs1449621656 680 dbSNP
rs1291703644 684 dbSNP
rs1367589939 690 dbSNP
rs1223157568 705 dbSNP
rs755604166 721 dbSNP
rs888472009 738 dbSNP
rs1007575085 744 dbSNP
rs1242392298 744 dbSNP
rs1377993156 747 dbSNP
rs570334774 764 dbSNP
rs1017450833 765 dbSNP
rs1005527210 770 dbSNP
rs1348805756 787 dbSNP
rs1352007422 790 dbSNP
rs1324554701 793 dbSNP
rs1419629667 794 dbSNP
rs1359180605 801 dbSNP
rs1156365220 803 dbSNP
rs1037020958 804 dbSNP
rs1190299995 810 dbSNP
rs966236525 811 dbSNP
rs1308934541 812 dbSNP
rs976025755 813 dbSNP
rs769712009 814 dbSNP
rs1317629634 816 dbSNP
rs1277944157 821 dbSNP
rs1289435902 824 dbSNP
rs1369915646 831 dbSNP
rs1275880044 832 dbSNP
rs959434451 834 dbSNP
rs1339156372 835 dbSNP
rs1012002713 838 dbSNP
rs950396465 843 dbSNP
rs534574489 844 dbSNP
rs775486810 845 dbSNP
rs948472193 846 dbSNP
rs1044141162 852 dbSNP
rs967703041 858 dbSNP
rs181957007 872 dbSNP
rs1178544606 876 dbSNP
rs1251775234 887 dbSNP
rs977748595 891 dbSNP
rs763108289 903 dbSNP
rs1228365281 907 dbSNP
rs1477356931 908 dbSNP
rs866024544 912 dbSNP
rs1162236073 914 dbSNP
rs1387589719 915 dbSNP
rs1056756385 920 dbSNP
rs1236981899 922 dbSNP
rs956322588 930 dbSNP
rs977372774 936 dbSNP
rs922796854 948 dbSNP
rs932788703 963 dbSNP
rs562653289 968 dbSNP
rs1009553806 969 dbSNP
rs1253330489 981 dbSNP
rs1383279167 982 dbSNP
rs909985930 983 dbSNP
rs568125422 986 dbSNP
rs115540266 1004 dbSNP
rs1373804399 1005 dbSNP
rs1360581505 1006 dbSNP
rs1037075149 1011 dbSNP
rs1464736283 1014 dbSNP
rs557191917 1014 dbSNP
rs1429117702 1017 dbSNP
rs939259451 1018 dbSNP
rs59357034 1046 dbSNP
rs532599892 1055 dbSNP
rs1246589474 1057 dbSNP
rs1018065776 1071 dbSNP
rs1243778278 1073 dbSNP
rs146947429 1088 dbSNP
rs997748680 1090 dbSNP
rs1026258215 1095 dbSNP
rs1022108525 1096 dbSNP
rs950594463 1099 dbSNP
rs903650197 1101 dbSNP
rs1251468966 1106 dbSNP
rs1483147320 1108 dbSNP
rs999222028 1115 dbSNP
rs1311172558 1117 dbSNP
rs1230490385 1140 dbSNP
rs1245333314 1144 dbSNP
rs1384393243 1146 dbSNP
rs1336753272 1150 dbSNP
rs577190402 1157 dbSNP
rs1445587773 1160 dbSNP
rs541370056 1162 dbSNP
rs1397669861 1165 dbSNP
rs547816582 1174 dbSNP
rs1030630273 1175 dbSNP
rs1349264015 1176 dbSNP
rs561361800 1181 dbSNP
rs137927785 1184 dbSNP
rs979878596 1185 dbSNP
rs1171406833 1192 dbSNP
rs1358757511 1193 dbSNP
rs140655316 1202 dbSNP
rs1263997947 1203 dbSNP
rs939570027 1207 dbSNP
rs1360714933 1209 dbSNP
rs1315222994 1219 dbSNP
rs1267006411 1220 dbSNP
rs910049561 1222 dbSNP
rs1384680880 1223 dbSNP
rs1374255602 1228 dbSNP
rs747374560 1232 dbSNP
rs1308655529 1261 dbSNP
rs941461420 1277 dbSNP
rs972780999 1278 dbSNP
rs1057022156 1279 dbSNP
rs1158179153 1280 dbSNP
rs1417907305 1282 dbSNP
rs1382209738 1283 dbSNP
rs918595304 1286 dbSNP
rs1432763087 1293 dbSNP
rs939311939 1294 dbSNP
rs542063766 1313 dbSNP
rs150484946 1315 dbSNP
rs754235887 1321 dbSNP
rs1215307799 1326 dbSNP
rs1350905012 1328 dbSNP
rs531141939 1330 dbSNP
rs1043921550 1336 dbSNP
rs565905328 1337 dbSNP
rs1043985524 1345 dbSNP
rs1299006775 1354 dbSNP
rs1406526003 1355 dbSNP
rs1202732531 1362 dbSNP
rs1215745156 1363 dbSNP
rs1297544161 1368 dbSNP
rs186576521 1372 dbSNP
rs943368992 1373 dbSNP
rs1039150865 1376 dbSNP
rs901909929 1383 dbSNP
rs16971597 1385 dbSNP
rs72779522 1407 dbSNP
rs1376119052 1408 dbSNP
rs1179093636 1415 dbSNP
rs1030684035 1419 dbSNP
rs886246522 1433 dbSNP
rs746710938 1434 dbSNP
rs1192153801 1436 dbSNP
rs901529348 1441 dbSNP
rs190987225 1443 dbSNP
rs74713994 1445 dbSNP
rs1343924353 1446 dbSNP
rs1253856031 1463 dbSNP
rs954481089 1470 dbSNP
rs1007135296 1474 dbSNP
rs1476451667 1487 dbSNP
rs182699133 1491 dbSNP
rs962836269 1493 dbSNP
rs1328125535 1511 dbSNP
rs972823846 1512 dbSNP
rs761971084 1516 dbSNP
rs1400383455 1517 dbSNP
rs1424520577 1522 dbSNP
rs1338977603 1528 dbSNP
rs1423370476 1533 dbSNP
rs539260239 1533 dbSNP
rs1479600051 1549 dbSNP
rs1168892167 1551 dbSNP
rs1178845361 1555 dbSNP
rs1408100933 1560 dbSNP
rs1470070181 1563 dbSNP
rs1193337539 1564 dbSNP
rs960801946 1588 dbSNP
rs1253406685 1596 dbSNP
rs1205193830 1598 dbSNP
rs11859503 1605 dbSNP
rs1444389174 1606 dbSNP
rs775500923 1608 dbSNP
rs960042350 1614 dbSNP
rs1341447592 1615 dbSNP
rs140657029 1617 dbSNP
rs988548531 1624 dbSNP
rs914079708 1626 dbSNP
rs947970071 1657 dbSNP
rs1043591066 1661 dbSNP
rs945508584 1678 dbSNP
rs1399825517 1679 dbSNP
rs149635295 1681 dbSNP
rs925528852 1687 dbSNP
rs943410440 1689 dbSNP
rs766296037 1694 dbSNP
rs1039426457 1720 dbSNP
rs901818171 1721 dbSNP
rs1282793074 1726 dbSNP
rs901630537 1729 dbSNP
rs1382862148 1730 dbSNP
rs933416384 1731 dbSNP
rs1047811103 1736 dbSNP
rs1217086078 1738 dbSNP
rs1444925208 1740 dbSNP
rs1237167710 1744 dbSNP
rs1246266347 1745 dbSNP
rs768802000 1750 dbSNP
rs1273385089 1757 dbSNP
rs1209181283 1762 dbSNP
rs1354086412 1763 dbSNP
rs562793517 1779 dbSNP
rs1246781997 1788 dbSNP
rs1376499579 1790 dbSNP
rs1430163338 1795 dbSNP
rs1050554005 1796 dbSNP
rs1006055880 1798 dbSNP
rs1336742273 1799 dbSNP
rs1323235558 1810 dbSNP
rs1016224610 1812 dbSNP
rs905766475 1822 dbSNP
rs1480657859 1827 dbSNP
rs1164990056 1832 dbSNP
rs557770866 1838 dbSNP
rs1017167892 1839 dbSNP
rs1175141806 1854 dbSNP
rs1470926141 1855 dbSNP
rs1035775781 1857 dbSNP
rs994359556 1868 dbSNP
rs1489854809 1875 dbSNP
rs1293823574 1877 dbSNP
rs1402444635 1882 dbSNP
rs959697997 1883 dbSNP
rs1318875730 1886 dbSNP
rs1353108732 1887 dbSNP
rs566719330 1889 dbSNP
rs1025801916 1898 dbSNP
rs1225692350 1906 dbSNP
rs1351672303 1926 dbSNP
rs146134513 1930 dbSNP
rs1304617594 1940 dbSNP
rs1019987356 1941 dbSNP
rs1440993902 1944 dbSNP
rs1359362080 1948 dbSNP
rs1278183311 1957 dbSNP
rs1353277686 1959 dbSNP
rs1408243717 1973 dbSNP
rs762194347 1980 dbSNP
rs979556325 1984 dbSNP
rs1479313987 1986 dbSNP
rs201232087 1987 dbSNP
rs367732267 1987 dbSNP
rs747616628 1987 dbSNP
rs777806355 1987 dbSNP
rs925227197 1987 dbSNP
rs979337392 1987 dbSNP
rs935236216 1992 dbSNP
rs1284262149 1996 dbSNP
rs1289719631 2004 dbSNP
rs925561655 2005 dbSNP
rs943635065 2009 dbSNP
rs569359240 2014 dbSNP
rs923126851 2014 dbSNP
rs933066606 2014 dbSNP
rs1050147193 2015 dbSNP
rs1467853037 2024 dbSNP
rs117913575 2033 dbSNP
rs114119645 2034 dbSNP
rs1417271201 2035 dbSNP
rs1188400220 2036 dbSNP
rs1047882169 2043 dbSNP
rs556999272 2045 dbSNP
rs907953891 2047 dbSNP
rs1269670490 2054 dbSNP
rs941874558 2059 dbSNP
rs1037351144 2073 dbSNP
rs1462770381 2079 dbSNP
rs185988976 2081 dbSNP
rs994421641 2084 dbSNP
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rs1025823062 2086 dbSNP
rs1362067830 2089 dbSNP
rs1313656397 2098 dbSNP
rs896619859 2104 dbSNP
rs1337209575 2108 dbSNP
rs1407832715 2108 dbSNP
rs1464881707 2112 dbSNP
rs1352505921 2114 dbSNP
rs1159083098 2115 dbSNP
rs1384493198 2116 dbSNP
rs1172475331 2121 dbSNP
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rs796762610 2122 dbSNP
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rs1057006722 2134 dbSNP
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rs1398271670 4556 dbSNP
rs1174570650 4557 dbSNP
rs1248708235 4557 dbSNP
rs1301579570 4557 dbSNP
rs1301860957 4557 dbSNP
rs1318284190 4557 dbSNP
rs1320075175 4557 dbSNP
rs1345683137 4557 dbSNP
rs1412859266 4557 dbSNP
rs1427288579 4557 dbSNP
rs1437254065 4557 dbSNP
rs1449076971 4557 dbSNP
rs1491401165 4557 dbSNP
rs529339023 4557 dbSNP
rs1491422145 4558 dbSNP
rs371511392 4559 dbSNP
rs1335008172 4560 dbSNP
rs1340995615 4560 dbSNP
rs1325915057 4561 dbSNP
rs1428900420 4562 dbSNP
rs867532948 4563 dbSNP
rs1319769109 4564 dbSNP
rs1218967136 4565 dbSNP
rs1262257090 4566 dbSNP
rs1429393053 4567 dbSNP
rs1342839323 4568 dbSNP
rs1202105816 4570 dbSNP
rs1256322533 4571 dbSNP
rs1429490658 4574 dbSNP
rs1445862569 4576 dbSNP
rs1190584833 4577 dbSNP
rs1180698837 4579 dbSNP
rs952144385 4605 dbSNP
rs1477930751 4606 dbSNP
rs1259067136 4615 dbSNP
rs1188010464 4616 dbSNP
rs1482420284 4620 dbSNP
rs58273010 4624 dbSNP
rs1206112328 4626 dbSNP
rs1307865468 4637 dbSNP
rs1427632775 4647 dbSNP
rs1226584657 4648 dbSNP
rs1357252076 4650 dbSNP
rs1015345555 4662 dbSNP
rs1348646610 4667 dbSNP
rs867008342 4670 dbSNP
rs1468080166 4671 dbSNP
rs1462681271 4684 dbSNP
rs527763797 4689 dbSNP
rs549631747 4690 dbSNP
rs990556980 4691 dbSNP
rs1182029177 4694 dbSNP
rs1471987335 4695 dbSNP
rs1248900446 4703 dbSNP
rs1384348766 4704 dbSNP
rs61366418 4711 dbSNP
rs981833407 4713 dbSNP
rs1245952475 4716 dbSNP
rs1398980157 4722 dbSNP
rs1273748686 4723 dbSNP
rs1300302428 4724 dbSNP
rs1227636422 4734 dbSNP
rs1327239807 4736 dbSNP
rs184012499 4738 dbSNP
rs1392235254 4746 dbSNP
rs1367138846 4748 dbSNP
rs950183608 4750 dbSNP
rs1404539316 4753 dbSNP
rs1443599554 4759 dbSNP
rs937254898 4772 dbSNP
rs1282476664 4773 dbSNP
rs1159082646 4786 dbSNP
rs10163208 4791 dbSNP
rs1235346622 4792 dbSNP
rs1409189839 4804 dbSNP
rs1160614159 4805 dbSNP
rs189095792 4806 dbSNP
rs1419110248 4807 dbSNP
rs1424056540 4813 dbSNP
rs1256448493 4826 dbSNP
rs914368505 4832 dbSNP
rs924860013 4837 dbSNP
rs1041439853 4841 dbSNP
rs890805980 4845 dbSNP
rs1262611503 4852 dbSNP
rs1213763283 4870 dbSNP
rs943741003 4875 dbSNP
rs1311633362 4885 dbSNP
rs1287499673 4886 dbSNP
rs1236688416 4889 dbSNP
rs1488450833 4898 dbSNP
rs1372267001 4906 dbSNP
rs1039763060 4910 dbSNP
rs934683381 4911 dbSNP
rs371083323 4914 dbSNP
rs181720893 4915 dbSNP
rs1289913749 4918 dbSNP
rs116622440 4922 dbSNP
rs1027825542 4925 dbSNP
rs1455293402 4928 dbSNP
rs932736234 4930 dbSNP
rs1395513667 4943 dbSNP
rs1187666590 4954 dbSNP
rs1447397059 4959 dbSNP
rs1263798361 4962 dbSNP
rs1205587687 4963 dbSNP
rs535291031 4965 dbSNP
rs1254329826 4968 dbSNP
rs556296349 4969 dbSNP
rs890992048 4970 dbSNP
rs1297088975 4971 dbSNP
rs372031085 4974 dbSNP
rs887909144 4974 dbSNP
rs1296922063 4975 dbSNP
rs538665986 4976 dbSNP
rs1008055142 4979 dbSNP
rs1310515867 4979 dbSNP
rs538351286 4979 dbSNP
rs75467685 4979 dbSNP
rs148190126 4982 dbSNP
rs1375715195 4984 dbSNP
rs992322735 4984 dbSNP
rs1460292236 4988 dbSNP
rs1374515237 4989 dbSNP
rs1423163123 4992 dbSNP
rs186024423 4992 dbSNP
rs1254229384 4993 dbSNP
rs1190190118 4994 dbSNP
rs981501025 4995 dbSNP
rs1361245826 4997 dbSNP
rs1034312847 4999 dbSNP
rs1203202599 5002 dbSNP
rs958620014 5003 dbSNP
rs1252235352 5013 dbSNP
rs989991683 5017 dbSNP
rs1424330283 5026 dbSNP
rs995400023 5027 dbSNP
rs914419484 5029 dbSNP
rs945878731 5037 dbSNP
rs1027080706 5038 dbSNP
rs912342414 5040 dbSNP
rs1389317528 5045 dbSNP
rs1398439626 5047 dbSNP
rs575837427 5049 dbSNP
rs1301923571 5052 dbSNP
rs3743955 5057 dbSNP
rs554217011 5060 dbSNP
rs1012414255 5062 dbSNP
rs1310887697 5064 dbSNP
rs369275063 5067 dbSNP
rs1221281035 5069 dbSNP
rs1263272002 5072 dbSNP
rs1489682188 5088 dbSNP
rs1210859076 5094 dbSNP
rs1439751161 5094 dbSNP
rs748453052 5094 dbSNP
rs971573529 5097 dbSNP
rs981555461 5110 dbSNP
rs575837666 5112 dbSNP
rs924756996 5114 dbSNP
rs1275617320 5122 dbSNP
rs956302071 5124 dbSNP
rs887961716 5131 dbSNP
rs1287143658 5134 dbSNP
rs1005082243 5137 dbSNP
rs79971269 5163 dbSNP
rs914560260 5169 dbSNP
rs1386020595 5184 dbSNP
rs1003332743 5186 dbSNP
rs1327921080 5197 dbSNP
rs1034321145 5203 dbSNP
rs1156858777 5203 dbSNP
rs1461878485 5203 dbSNP
rs1471175897 5204 dbSNP
rs958670359 5206 dbSNP
rs1198359784 5211 dbSNP
rs1467424252 5213 dbSNP
rs932665760 5219 dbSNP
rs1255281303 5232 dbSNP
rs1050302170 5248 dbSNP
rs767061101 5252 dbSNP
rs1282995695 5277 dbSNP
rs1221597339 5286 dbSNP
rs1162988912 5287 dbSNP
rs1279774762 5289 dbSNP
rs190490195 5290 dbSNP
rs1344816578 5291 dbSNP
rs912637066 5306 dbSNP
rs9933536 5312 dbSNP
rs1036885571 5313 dbSNP
rs182268444 5323 dbSNP
rs1395488621 5326 dbSNP
rs1316078470 5328 dbSNP
rs372551010 5330 dbSNP
rs555082033 5330 dbSNP
rs995431275 5331 dbSNP
rs1172286198 5353 dbSNP
rs1452795017 5356 dbSNP
rs1397326592 5357 dbSNP
rs1048271143 5372 dbSNP
rs1377030104 5373 dbSNP
rs1240878796 5374 dbSNP
rs920941719 5382 dbSNP
rs930941585 5385 dbSNP
rs3743956 5390 dbSNP
rs1209766678 5394 dbSNP
rs1011909426 5395 dbSNP
rs1305118689 5397 dbSNP
rs1234773449 5399 dbSNP
rs909503390 5404 dbSNP
rs186013151 5407 dbSNP
rs560486352 5414 dbSNP
rs1036537692 5416 dbSNP
rs1309926247 5416 dbSNP
rs1323188288 5417 dbSNP
rs1377537494 5421 dbSNP
rs1245065567 5424 dbSNP
rs970467169 5428 dbSNP
rs553726651 5429 dbSNP
rs1429515508 5432 dbSNP
rs1417807283 5444 dbSNP
rs1188859933 5445 dbSNP
rs765963087 5447 dbSNP
rs907332702 5452 dbSNP
rs145147622 5456 dbSNP
rs956168371 5457 dbSNP
rs894547579 5480 dbSNP
rs753464764 5486 dbSNP
rs1270612395 5498 dbSNP
rs1021572461 5499 dbSNP
rs754761357 5502 dbSNP
rs1292558113 5505 dbSNP
rs371447410 5519 dbSNP
rs567715171 5523 dbSNP
rs954214262 5527 dbSNP
rs756307184 5528 dbSNP
rs531939967 5536 dbSNP
rs1313788551 5540 dbSNP
rs1409424612 5547 dbSNP
rs985460853 5548 dbSNP
rs1416047516 5552 dbSNP
rs190870504 5554 dbSNP
rs778805634 5559 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084065. RNA binding protein: AGO2. Condition:CLIP_emetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' uguagauucugacguuCUCAAGa 5'
                          ||| || 
Target 5' ggugggcggaucaccuGAGGUCa 3'
 		5 - 27
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084065
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_emetine_AbnovaAb
Location of target site ENST00000381440.3 | 3UTR | GCGAGGUGGGCGGAUCACCUGAGGUCAGG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
133 hsa-miR-4680-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT378771 MACC1 MACC1, MET transcriptional regulator 2 2
MIRT393867 ZDHHC21 zinc finger DHHC-type containing 21 2 4
MIRT446684 C2CD2 C2 calcium dependent domain containing 2 2 2
MIRT447600 MRPL3 mitochondrial ribosomal protein L3 2 2
MIRT450708 RNF152 ring finger protein 152 2 2
MIRT450784 PAPOLG poly(A) polymerase gamma 2 2
MIRT454623 COL23A1 collagen type XXIII alpha 1 chain 2 8
MIRT461620 PTCD3 pentatricopeptide repeat domain 3 2 2
MIRT462695 SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 2 2
MIRT475530 HOXA3 homeobox A3 2 8
MIRT475739 HERPUD1 homocysteine inducible ER protein with ubiquitin like domain 1 2 4
MIRT489676 CYP1A1 cytochrome P450 family 1 subfamily A member 1 2 2
MIRT490610 SLC47A1 solute carrier family 47 member 1 2 2
MIRT493628 HIC2 HIC ZBTB transcriptional repressor 2 2 2
MIRT496152 RPS15A ribosomal protein S15a 2 2
MIRT499232 VAV3 vav guanine nucleotide exchange factor 3 2 4
MIRT501496 PRICKLE2 prickle planar cell polarity protein 2 2 2
MIRT507163 GAS2L3 growth arrest specific 2 like 3 2 2
MIRT512389 MTRNR2L1 MT-RNR2-like 1 2 4
MIRT514626 MTRNR2L7 MT-RNR2-like 7 2 2
MIRT517474 PEX26 peroxisomal biogenesis factor 26 2 2
MIRT525332 CNGB1 cyclic nucleotide gated channel beta 1 2 2
MIRT526685 BAK1 BCL2 antagonist/killer 1 2 2
MIRT527317 CCR2 C-C motif chemokine receptor 2 2 2
MIRT527608 EYS eyes shut homolog (Drosophila) 2 2
MIRT528794 RAB32 RAB32, member RAS oncogene family 2 2
MIRT531048 TIPARP TCDD inducible poly(ADP-ribose) polymerase 2 2
MIRT532254 TBPL2 TATA-box binding protein like 2 2 2
MIRT533801 TMED7 transmembrane p24 trafficking protein 7 2 4
MIRT535887 MLEC malectin 2 2
MIRT540704 PDPK1 3-phosphoinositide dependent protein kinase 1 2 4
MIRT544645 PHF8 PHD finger protein 8 2 4
MIRT545760 HS3ST1 heparan sulfate-glucosamine 3-sulfotransferase 1 2 2
MIRT555310 PPP2R5C protein phosphatase 2 regulatory subunit B'gamma 2 2
MIRT555877 PAFAH1B2 platelet activating factor acetylhydrolase 1b catalytic subunit 2 2 4
MIRT559507 ARID5B AT-rich interaction domain 5B 2 2
MIRT560448 SLC30A7 solute carrier family 30 member 7 2 2
MIRT561262 ZIK1 zinc finger protein interacting with K protein 1 2 2
MIRT561795 PAWR pro-apoptotic WT1 regulator 2 2
MIRT567007 KLHL15 kelch like family member 15 2 2
MIRT569298 SURF6 surfeit 6 2 2
MIRT570606 MTRNR2L11 MT-RNR2-like 11 2 2
MIRT572888 ADCY2 adenylate cyclase 2 2 2
MIRT573119 ADAMTS18 ADAM metallopeptidase with thrombospondin type 1 motif 18 2 2
MIRT608332 ZNF670 zinc finger protein 670 2 6
MIRT614942 KCNK5 potassium two pore domain channel subfamily K member 5 2 2
MIRT615324 ERN1 endoplasmic reticulum to nucleus signaling 1 2 2
MIRT618441 ZNF800 zinc finger protein 800 2 2
MIRT620110 HARBI1 harbinger transposase derived 1 2 2
MIRT626008 ZNF517 zinc finger protein 517 2 2
MIRT626626 SLC30A6 solute carrier family 30 member 6 2 2
MIRT627842 POU3F1 POU class 3 homeobox 1 2 2
MIRT628386 CACNB2 calcium voltage-gated channel auxiliary subunit beta 2 2 2
MIRT629305 PTPLAD2 3-hydroxyacyl-CoA dehydratase 4 1 1
MIRT629864 GATAD1 GATA zinc finger domain containing 1 2 2
MIRT630444 IDE insulin degrading enzyme 2 2
MIRT631854 PIGG phosphatidylinositol glycan anchor biosynthesis class G 2 2
MIRT633173 AGO3 argonaute 3, RISC catalytic component 2 2
MIRT633477 ZNF724P zinc finger protein 724 2 2
MIRT634395 PLSCR1 phospholipid scramblase 1 2 2
MIRT635538 TRIM72 tripartite motif containing 72 2 2
MIRT635821 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT636169 TIMM8A translocase of inner mitochondrial membrane 8A 2 2
MIRT636797 CYB5D1 cytochrome b5 domain containing 1 2 2
MIRT637952 IVD isovaleryl-CoA dehydrogenase 2 2
MIRT645136 HES2 hes family bHLH transcription factor 2 2 2
MIRT645667 ADK adenosine kinase 2 2
MIRT646148 FLVCR1 feline leukemia virus subgroup C cellular receptor 1 2 2
MIRT647004 NCR3LG1 natural killer cell cytotoxicity receptor 3 ligand 1 2 2
MIRT648187 C2orf68 chromosome 2 open reading frame 68 2 2
MIRT650090 TERF2 telomeric repeat binding factor 2 2 2
MIRT650329 RTN2 reticulon 2 2 2
MIRT654224 RNF165 ring finger protein 165 2 2
MIRT654545 RAB1A RAB1A, member RAS oncogene family 2 2
MIRT656457 MAPK14 mitogen-activated protein kinase 14 2 2
MIRT656828 KLF8 Kruppel like factor 8 2 2
MIRT657112 ITPRIPL2 inositol 1,4,5-trisphosphate receptor interacting protein like 2 2 2
MIRT657930 GATSL2 cytosolic arginine sensor for mTORC1 subunit 2 2 2
MIRT659375 CREG2 cellular repressor of E1A stimulated genes 2 2 2
MIRT659833 CARHSP1 calcium regulated heat stable protein 1 2 2
MIRT662108 LACTB lactamase beta 2 4
MIRT662789 TBC1D25 TBC1 domain family member 25 2 2
MIRT669501 ARL3 ADP ribosylation factor like GTPase 3 2 2
MIRT669759 ZNF101 zinc finger protein 101 2 4
MIRT669800 GAN gigaxonin 2 2
MIRT670050 RPP14 ribonuclease P/MRP subunit p14 2 2
MIRT670299 RBBP4 RB binding protein 4, chromatin remodeling factor 2 2
MIRT670388 EMP2 epithelial membrane protein 2 2 2
MIRT672862 C22orf29 retrotransposon Gag like 10 2 2
MIRT672890 FXN frataxin 2 2
MIRT673210 C10orf76 chromosome 10 open reading frame 76 2 2
MIRT674001 KCNN3 potassium calcium-activated channel subfamily N member 3 2 2
MIRT674163 BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 2 2
MIRT674502 TIRAP TIR domain containing adaptor protein 2 2
MIRT675470 NUBPL nucleotide binding protein like 2 2
MIRT675671 TMOD2 tropomodulin 2 2 2
MIRT676006 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676074 TIMM50 translocase of inner mitochondrial membrane 50 2 2
MIRT676386 SEC24D SEC24 homolog D, COPII coat complex component 2 2
MIRT676764 SNX2 sorting nexin 2 2 2
MIRT676896 GABPB1 GA binding protein transcription factor beta subunit 1 2 2
MIRT676978 ZNF708 zinc finger protein 708 2 2
MIRT677236 C15orf40 chromosome 15 open reading frame 40 2 2
MIRT677369 HSPA4L heat shock protein family A (Hsp70) member 4 like 2 2
MIRT677464 PDLIM3 PDZ and LIM domain 3 2 2
MIRT678081 EIF2A eukaryotic translation initiation factor 2A 2 2
MIRT678093 ATCAY ATCAY, caytaxin 2 2
MIRT678324 FBLIM1 filamin binding LIM protein 1 2 2
MIRT678417 ANKRD36 ankyrin repeat domain 36 2 2
MIRT678521 ZNF347 zinc finger protein 347 2 2
MIRT678700 TRIP11 thyroid hormone receptor interactor 11 2 2
MIRT678829 PDE6A phosphodiesterase 6A 2 2
MIRT679991 RUNDC1 RUN domain containing 1 2 2
MIRT680751 PSD4 pleckstrin and Sec7 domain containing 4 2 2
MIRT681249 ZNF383 zinc finger protein 383 2 2
MIRT681422 GTF3C6 general transcription factor IIIC subunit 6 2 2
MIRT681948 SLC19A3 solute carrier family 19 member 3 2 2
MIRT689278 C5AR2 complement component 5a receptor 2 2 2
MIRT690389 PARP15 poly(ADP-ribose) polymerase family member 15 2 2
MIRT691845 OSCAR osteoclast associated, immunoglobulin-like receptor 2 2
MIRT693863 IYD iodotyrosine deiodinase 2 2
MIRT696002 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT701930 MLLT1 MLLT1, super elongation complex subunit 2 2
MIRT702341 KLHL7 kelch like family member 7 2 2
MIRT703557 FKBP14 FK506 binding protein 14 2 2
MIRT705033 CACUL1 CDK2 associated cullin domain 1 2 2
MIRT706341 STAC2 SH3 and cysteine rich domain 2 2 2
MIRT709671 RGP1 RGP1 homolog, RAB6A GEF complex partner 1 2 2
MIRT711212 EFHB EF-hand domain family member B 2 2
MIRT718342 PURA purine rich element binding protein A 2 2
MIRT722755 SIRPB2 signal regulatory protein beta 2 2 2
MIRT723535 NFATC2IP nuclear factor of activated T-cells 2 interacting protein 2 2
MIRT724498 BFAR bifunctional apoptosis regulator 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4680-5p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)

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