pre-miRNA Information
pre-miRNA hsa-mir-4480   
Genomic Coordinates chr10: 12578753 - 12578823
Description Homo sapiens miR-4480 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4480
Sequence 44| AGCCAAGUGGAAGUUACUUUA |64
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 1 10 + 12578796 23291724, 27587585 MiREDiBase
A-to-I 12 10 + 12578807 23291724, 27587585 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs929437808 7 dbSNP
rs1454494557 9 dbSNP
rs1345041659 17 dbSNP
rs561601367 21 dbSNP
Putative Targets

Gene Information
Gene Symbol GJD2   
Synonyms CX36, GJA9
Description gap junction protein delta 2
Transcript NM_020660   
Expression
Putative miRNA Targets on GJD2
3'UTR of GJD2
(miRNA target sites are highlighted)
>GJD2|NM_020660|3'UTR
   1 GAGGGCAGGTTTCATGAAGGTCTGGGGGATGGCAAGG
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' auuucauugaaggugaACCGa 5'
                          |||| 
Target 5' atgaaggtctgggggaTGGCa 3'
14 - 34 80.00 -7.00
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN17957040 497 COSMIC
COSN8172785 796 COSMIC
COSN21375632 808 COSMIC
COSN15013282 1348 COSMIC
COSN8172784 1383 COSMIC
COSN22788290 1434 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs955978248 9 dbSNP
rs755862258 17 dbSNP
rs780972179 20 dbSNP
rs1265757241 25 dbSNP
rs372564429 27 dbSNP
rs751078368 28 dbSNP
rs766013958 30 dbSNP
rs1038772684 32 dbSNP
rs757724805 33 dbSNP
rs754307386 37 dbSNP
rs373145560 40 dbSNP
rs1338079779 43 dbSNP
rs1403582233 44 dbSNP
rs544517317 47 dbSNP
rs200667131 49 dbSNP
rs577090680 53 dbSNP
rs199863427 54 dbSNP
rs1324330481 62 dbSNP
rs201852436 63 dbSNP
rs908550461 64 dbSNP
rs201005605 65 dbSNP
rs199744979 68 dbSNP
rs201362920 69 dbSNP
rs1484023533 75 dbSNP
rs558322044 78 dbSNP
rs1240084201 79 dbSNP
rs1178043754 80 dbSNP
rs1267639904 91 dbSNP
rs537570012 92 dbSNP
rs113551561 93 dbSNP
rs954228579 94 dbSNP
rs572162872 95 dbSNP
rs553859461 98 dbSNP
rs975638445 101 dbSNP
rs1219047346 103 dbSNP
rs535449404 107 dbSNP
rs1403677877 112 dbSNP
rs926266811 114 dbSNP
rs7173113 123 dbSNP
rs1292322340 125 dbSNP
rs1461479658 144 dbSNP
rs1239332621 145 dbSNP
rs556313509 146 dbSNP
rs1411236107 149 dbSNP
rs1293474755 151 dbSNP
rs755443861 156 dbSNP
rs1391655217 158 dbSNP
rs1002520902 177 dbSNP
rs1009248125 189 dbSNP
rs753978337 191 dbSNP
rs1344039357 205 dbSNP
rs906965774 207 dbSNP
rs1290967312 211 dbSNP
rs1490473088 214 dbSNP
rs960472001 215 dbSNP
rs1258993413 218 dbSNP
rs1426887439 224 dbSNP
rs769046550 225 dbSNP
rs1427603370 232 dbSNP
rs1035247676 233 dbSNP
rs1044089429 258 dbSNP
rs1002082225 262 dbSNP
rs948463052 265 dbSNP
rs905100577 271 dbSNP
rs538516986 272 dbSNP
rs1163265123 281 dbSNP
rs1038254979 289 dbSNP
rs914443851 298 dbSNP
rs1459854999 299 dbSNP
rs1158630294 303 dbSNP
rs1287240280 306 dbSNP
rs181347763 307 dbSNP
rs766551687 308 dbSNP
rs1300082165 309 dbSNP
rs552797456 314 dbSNP
rs1380786399 318 dbSNP
rs1243502243 323 dbSNP
rs924523508 328 dbSNP
rs527889877 331 dbSNP
rs1159868433 357 dbSNP
rs965332366 361 dbSNP
rs934053234 365 dbSNP
rs1258476864 369 dbSNP
rs912560114 373 dbSNP
rs79846152 377 dbSNP
rs1249517055 381 dbSNP
rs1189253032 382 dbSNP
rs548320409 383 dbSNP
rs954092395 386 dbSNP
rs535774405 398 dbSNP
rs978998494 400 dbSNP
rs967622776 401 dbSNP
rs974241817 403 dbSNP
rs1351379245 410 dbSNP
rs763998211 414 dbSNP
rs1015809607 417 dbSNP
rs367739210 422 dbSNP
rs1322562527 424 dbSNP
rs1404221610 425 dbSNP
rs762688013 427 dbSNP
rs1262011549 429 dbSNP
rs1379578952 435 dbSNP
rs1239081232 437 dbSNP
rs1304765669 440 dbSNP
rs1002962188 442 dbSNP
rs906910159 447 dbSNP
rs987790175 449 dbSNP
rs148186107 450 dbSNP
rs1034808993 452 dbSNP
rs1022582299 455 dbSNP
rs1002369340 465 dbSNP
rs139334662 469 dbSNP
rs1484436751 471 dbSNP
rs1297935485 488 dbSNP
rs1398725766 491 dbSNP
rs1420160606 493 dbSNP
rs1387711579 495 dbSNP
rs1289535543 496 dbSNP
rs76912235 497 dbSNP
rs76826781 499 dbSNP
rs1375993644 501 dbSNP
rs1469514585 502 dbSNP
rs1178924571 503 dbSNP
rs1177412502 516 dbSNP
rs1480874009 519 dbSNP
rs1012641600 521 dbSNP
rs1359585059 522 dbSNP
rs1289724027 523 dbSNP
rs1296169310 523 dbSNP
rs1320791099 523 dbSNP
rs1372555314 523 dbSNP
rs1410338479 523 dbSNP
rs1449967060 523 dbSNP
rs1491352704 523 dbSNP
rs572193 523 dbSNP
rs61551629 523 dbSNP
rs1184925007 524 dbSNP
rs1200163311 524 dbSNP
rs1232613578 524 dbSNP
rs1266942754 524 dbSNP
rs1408380037 524 dbSNP
rs142480430 524 dbSNP
rs1427529967 524 dbSNP
rs1480143063 524 dbSNP
rs1483694795 524 dbSNP
rs1491336154 524 dbSNP
rs1491368247 524 dbSNP
rs550654306 524 dbSNP
rs763248914 524 dbSNP
rs878911812 524 dbSNP
rs1212412918 525 dbSNP
rs1491213896 525 dbSNP
rs57925142 525 dbSNP
rs72220671 525 dbSNP
rs776767675 525 dbSNP
rs58041931 526 dbSNP
rs1192618973 532 dbSNP
rs892871664 533 dbSNP
rs1487282408 535 dbSNP
rs1054709842 540 dbSNP
rs1263694518 542 dbSNP
rs60113718 544 dbSNP
rs35271393 547 dbSNP
rs934487010 548 dbSNP
rs1205214265 552 dbSNP
rs1474573945 554 dbSNP
rs780346804 554 dbSNP
rs1186142599 559 dbSNP
rs969207840 562 dbSNP
rs1449866243 563 dbSNP
rs188804234 568 dbSNP
rs1040326420 571 dbSNP
rs1423877335 574 dbSNP
rs944604025 580 dbSNP
rs1351082565 582 dbSNP
rs1428290293 594 dbSNP
rs1269211819 598 dbSNP
rs1365397033 598 dbSNP
rs57475061 600 dbSNP
rs1253714955 603 dbSNP
rs1313318887 604 dbSNP
rs60782015 614 dbSNP
rs912591211 616 dbSNP
rs1359421075 628 dbSNP
rs1210927742 632 dbSNP
rs1292200678 638 dbSNP
rs985445805 640 dbSNP
rs1323751029 652 dbSNP
rs932738407 653 dbSNP
rs920001680 668 dbSNP
rs1190302702 673 dbSNP
rs1217120536 676 dbSNP
rs1328712276 679 dbSNP
rs887050996 683 dbSNP
rs1472448360 699 dbSNP
rs974650912 700 dbSNP
rs1450036172 701 dbSNP
rs1415400371 705 dbSNP
rs1398464262 708 dbSNP
rs1395944151 710 dbSNP
rs1400220452 712 dbSNP
rs1388959195 716 dbSNP
rs1047077867 719 dbSNP
rs1335193710 723 dbSNP
rs998229098 726 dbSNP
rs1470444969 727 dbSNP
rs1286482756 728 dbSNP
rs532433978 732 dbSNP
rs1399775381 733 dbSNP
rs1169717263 734 dbSNP
rs1474267960 735 dbSNP
rs1374585084 736 dbSNP
rs1268802425 738 dbSNP
rs1201971824 739 dbSNP
rs1466461044 739 dbSNP
rs1193867208 740 dbSNP
rs901247463 743 dbSNP
rs1187919994 744 dbSNP
rs1464498653 747 dbSNP
rs1240758454 748 dbSNP
rs564839338 748 dbSNP
rs1204961618 751 dbSNP
rs540000556 753 dbSNP
rs572717578 760 dbSNP
rs981696592 764 dbSNP
rs971601175 767 dbSNP
rs1157798407 768 dbSNP
rs1022612765 790 dbSNP
rs1012507439 796 dbSNP
rs1173797675 804 dbSNP
rs1404828805 805 dbSNP
rs112025264 808 dbSNP
rs1032722289 809 dbSNP
rs373601569 814 dbSNP
rs115484604 815 dbSNP
rs1289107476 817 dbSNP
rs769633108 824 dbSNP
rs867516677 827 dbSNP
rs913525311 828 dbSNP
rs1317283673 833 dbSNP
rs1262763568 847 dbSNP
rs567228311 853 dbSNP
rs1345896496 854 dbSNP
rs1200855641 857 dbSNP
rs1040593119 863 dbSNP
rs1376448176 869 dbSNP
rs944635217 869 dbSNP
rs1251983055 873 dbSNP
rs1329642000 874 dbSNP
rs372712161 876 dbSNP
rs1376750862 877 dbSNP
rs1398410165 879 dbSNP
rs927620334 879 dbSNP
rs980521907 879 dbSNP
rs574873866 881 dbSNP
rs1049777652 884 dbSNP
rs111294921 890 dbSNP
rs920015207 893 dbSNP
rs776192375 895 dbSNP
rs1457362960 899 dbSNP
rs537897759 900 dbSNP
rs1184906034 907 dbSNP
rs1444785489 912 dbSNP
rs1235663764 932 dbSNP
rs1257581776 934 dbSNP
rs1237018009 937 dbSNP
rs200947138 943 dbSNP
rs185998923 962 dbSNP
rs1275269709 963 dbSNP
rs770400387 974 dbSNP
rs746717076 975 dbSNP
rs1433453922 1001 dbSNP
rs971632287 1012 dbSNP
rs1357946144 1026 dbSNP
rs901135676 1027 dbSNP
rs1371757815 1045 dbSNP
rs1449251796 1046 dbSNP
rs607028 1069 dbSNP
rs202007522 1072 dbSNP
rs1247347632 1073 dbSNP
rs1423234457 1080 dbSNP
rs792418 1087 dbSNP
rs1307133162 1089 dbSNP
rs904635507 1091 dbSNP
rs1336525903 1092 dbSNP
rs12439076 1097 dbSNP
rs567090766 1100 dbSNP
rs116316215 1103 dbSNP
rs1344296022 1111 dbSNP
rs1243647708 1113 dbSNP
rs946252557 1114 dbSNP
rs1033082910 1125 dbSNP
rs1211043207 1130 dbSNP
rs1259236748 1132 dbSNP
rs891971295 1133 dbSNP
rs536328847 1136 dbSNP
rs1392388987 1138 dbSNP
rs998639539 1140 dbSNP
rs564785144 1141 dbSNP
rs1379198927 1143 dbSNP
rs967519104 1145 dbSNP
rs568906513 1149 dbSNP
rs550503519 1150 dbSNP
rs938948399 1151 dbSNP
rs1436063473 1154 dbSNP
rs375203610 1159 dbSNP
rs980872463 1160 dbSNP
rs1311934099 1161 dbSNP
rs947810318 1180 dbSNP
rs1246384739 1182 dbSNP
rs1008714323 1187 dbSNP
rs909674186 1188 dbSNP
rs1198607239 1191 dbSNP
rs889041338 1192 dbSNP
rs116083111 1194 dbSNP
rs1250364168 1198 dbSNP
rs1025486108 1206 dbSNP
rs564804757 1210 dbSNP
rs976641921 1238 dbSNP
rs112926421 1239 dbSNP
rs965688864 1240 dbSNP
rs1282268929 1244 dbSNP
rs1411292030 1247 dbSNP
rs1018263645 1250 dbSNP
rs898533509 1259 dbSNP
rs574943942 1265 dbSNP
rs1351674192 1266 dbSNP
rs904597657 1269 dbSNP
rs1021630816 1276 dbSNP
rs11291261 1295 dbSNP
rs1231318879 1303 dbSNP
rs1445543986 1304 dbSNP
rs1038756323 1316 dbSNP
rs1057240136 1321 dbSNP
rs1379830586 1331 dbSNP
rs1397689862 1331 dbSNP
rs938931716 1338 dbSNP
rs940147330 1365 dbSNP
rs906130166 1382 dbSNP
rs546513111 1384 dbSNP
rs1269633598 1389 dbSNP
rs553176133 1398 dbSNP
rs950181694 1400 dbSNP
rs916170997 1402 dbSNP
rs991734726 1404 dbSNP
rs1359767966 1408 dbSNP
rs1315629902 1423 dbSNP
rs1484550536 1427 dbSNP
rs957839460 1428 dbSNP
rs1408070670 1432 dbSNP
rs1171698149 1438 dbSNP
rs779276306 1444 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084064. RNA binding protein: AGO2. Condition:CLIP_noemetine_AbnovaAb HITS-CLIP data was present in GSM1084065. RNA binding protein: AGO2. Condition:CLIP_emetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' auUUCAUUGAAGGUGAACCGa 5'
            ||| :|     ||||||| 
Target 5' gaAAGAGAGAGAGACUUGGCu 3'
2 - 22
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084064
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noemetine_AbnovaAb
Location of target site ENST00000454994.2 | 3UTR | GAGGGUUUUGAAAGAGAGAGAGACUUGGCUUCCUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1084065
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_emetine_AbnovaAb
Location of target site ENST00000454994.2 | 3UTR | UGAAAGAGAGAGAGACUUGGCUUC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
117 hsa-miR-4480 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT056040 MLLT10 MLLT10, histone lysine methyltransferase DOT1L cofactor 2 2
MIRT091259 FXR1 FMR1 autosomal homolog 1 2 4
MIRT117347 MAPRE2 microtubule associated protein RP/EB family member 2 2 2
MIRT234960 ZNF439 zinc finger protein 439 2 4
MIRT441356 ZNF75A zinc finger protein 75a 2 2
MIRT441426 STXBP2 syntaxin binding protein 2 2 2
MIRT441455 ZNF488 zinc finger protein 488 2 4
MIRT441524 ZBTB10 zinc finger and BTB domain containing 10 2 2
MIRT441576 EXOC5 exocyst complex component 5 2 2
MIRT441597 ABCB5 ATP binding cassette subfamily B member 5 2 6
MIRT441610 ATP13A4 ATPase 13A4 2 2
MIRT441698 CIT citron rho-interacting serine/threonine kinase 2 2
MIRT441714 FGF9 fibroblast growth factor 9 2 2
MIRT441784 MAPK8 mitogen-activated protein kinase 8 2 4
MIRT441795 EXOSC2 exosome component 2 2 2
MIRT441868 RNASEL ribonuclease L 2 2
MIRT441900 SLC9A8 solute carrier family 9 member A8 2 6
MIRT441919 FAM217B family with sequence similarity 217 member B 2 2
MIRT441928 C1orf109 chromosome 1 open reading frame 109 2 2
MIRT441938 RIMKLB ribosomal modification protein rimK like family member B 2 2
MIRT442157 DPY19L1 dpy-19 like C-mannosyltransferase 1 2 2
MIRT442172 AZF1 azoospermia factor 1 2 2
MIRT442208 IRS1 insulin receptor substrate 1 2 2
MIRT442237 DDX19A DEAD-box helicase 19A 2 2
MIRT442366 ZC3HAV1L zinc finger CCCH-type containing, antiviral 1 like 2 2
MIRT442572 SDC1 syndecan 1 2 2
MIRT442604 ZNF391 zinc finger protein 391 2 2
MIRT442609 MRC1 mannose receptor C-type 1 2 2
MIRT442647 POP4 POP4 homolog, ribonuclease P/MRP subunit 2 2
MIRT442658 OIP5 Opa interacting protein 5 2 6
MIRT442686 COX15 COX15, cytochrome c oxidase assembly homolog 2 2
MIRT442773 JAG1 jagged 1 2 2
MIRT442785 CHD8 chromodomain helicase DNA binding protein 8 2 2
MIRT442895 PLCB3 phospholipase C beta 3 2 2
MIRT442941 C17orf105 chromosome 17 open reading frame 105 2 2
MIRT442959 SGCD sarcoglycan delta 2 2
MIRT442998 EDAR ectodysplasin A receptor 2 2
MIRT443017 C21orf91 chromosome 21 open reading frame 91 2 2
MIRT443064 CASP5 caspase 5 2 2
MIRT443069 ABLIM1 actin binding LIM protein 1 2 2
MIRT443208 VPS36 vacuolar protein sorting 36 homolog 2 2
MIRT443237 ANKRD26 ankyrin repeat domain 26 2 2
MIRT443253 A1CF APOBEC1 complementation factor 2 2
MIRT443329 JUN Jun proto-oncogene, AP-1 transcription factor subunit 2 2
MIRT443333 NRAS NRAS proto-oncogene, GTPase 2 2
MIRT443349 STX7 syntaxin 7 2 2
MIRT443452 CLIC5 chloride intracellular channel 5 2 2
MIRT443547 GPR35 G protein-coupled receptor 35 2 2
MIRT443616 AVPR1A arginine vasopressin receptor 1A 2 2
MIRT443626 CPSF2 cleavage and polyadenylation specific factor 2 2 2
MIRT443730 ALPK3 alpha kinase 3 2 2
MIRT443786 ST13 ST13, Hsp70 interacting protein 2 2
MIRT443852 RGS6 regulator of G protein signaling 6 2 2
MIRT445483 KLF5 Kruppel like factor 5 2 2
MIRT471105 PHLDA2 pleckstrin homology like domain family A member 2 2 2
MIRT472329 NETO2 neuropilin and tolloid like 2 2 4
MIRT472391 NDRG3 NDRG family member 3 2 2
MIRT473522 MAX MYC associated factor X 2 2
MIRT473874 MAFK MAF bZIP transcription factor K 2 6
MIRT476021 GTF2A1 general transcription factor IIA subunit 1 2 2
MIRT478320 DDN dendrin 2 2
MIRT492049 TNFSF9 TNF superfamily member 9 2 2
MIRT494851 ANKRD24 ankyrin repeat domain 24 2 2
MIRT494991 TSSC1 EARP complex and GARP complex interacting protein 1 2 2
MIRT495034 RASSF2 Ras association domain family member 2 2 2
MIRT495111 NOL10 nucleolar protein 10 2 2
MIRT495113 TRADD TNFRSF1A associated via death domain 2 2
MIRT495131 METTL24 methyltransferase like 24 2 2
MIRT495147 STAC2 SH3 and cysteine rich domain 2 2 2
MIRT495297 NUP54 nucleoporin 54 2 2
MIRT495341 RTN2 reticulon 2 2 2
MIRT495347 ATP5S ATP synthase, H+ transporting, mitochondrial Fo complex subunit s (factor B) 2 2
MIRT496682 DUSP18 dual specificity phosphatase 18 2 2
MIRT496743 TGFBR1 transforming growth factor beta receptor 1 2 2
MIRT496841 KCNIP2 potassium voltage-gated channel interacting protein 2 2 2
MIRT496852 GPAM glycerol-3-phosphate acyltransferase, mitochondrial 2 2
MIRT496889 FOXP1 forkhead box P1 2 2
MIRT496922 CLMN calmin 2 2
MIRT496990 TMEM231 transmembrane protein 231 2 2
MIRT497002 SNAP25 synaptosome associated protein 25 2 2
MIRT497058 C6orf223 chromosome 6 open reading frame 223 2 2
MIRT500529 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 6
MIRT506048 PPP6C protein phosphatase 6 catalytic subunit 2 4
MIRT512163 CD164 CD164 molecule 2 6
MIRT527051 RDH13 retinol dehydrogenase 13 2 2
MIRT532282 TNFSF14 TNF superfamily member 14 2 2
MIRT534083 SPRY4 sprouty RTK signaling antagonist 4 2 2
MIRT534605 RNASEH1 ribonuclease H1 2 4
MIRT539509 ACSS3 acyl-CoA synthetase short chain family member 3 2 2
MIRT543069 ARID4B AT-rich interaction domain 4B 2 2
MIRT544233 CCBL2 kynurenine aminotransferase 3 2 2
MIRT544686 ZNF224 zinc finger protein 224 2 4
MIRT546269 TMEM30A transmembrane protein 30A 2 4
MIRT559069 C19orf47 chromosome 19 open reading frame 47 2 2
MIRT562768 RMI2 RecQ mediated genome instability 2 2 2
MIRT563974 HCFC1 host cell factor C1 2 2
MIRT564086 NSA2 NSA2, ribosome biogenesis homolog 2 2
MIRT564525 PDXP pyridoxal phosphatase 2 2
MIRT564613 ZNF703 zinc finger protein 703 2 2
MIRT566252 PTBP1 polypyrimidine tract binding protein 1 2 2
MIRT614420 ZNF440 zinc finger protein 440 2 2
MIRT618789 MTHFR methylenetetrahydrofolate reductase 2 2
MIRT619160 PPDPF pancreatic progenitor cell differentiation and proliferation factor 2 2
MIRT641778 ZDHHC7 zinc finger DHHC-type containing 7 2 4
MIRT653680 SLC25A36 solute carrier family 25 member 36 2 2
MIRT657861 GJD2 gap junction protein delta 2 2 2
MIRT660879 ADCYAP1R1 ADCYAP receptor type I 2 2
MIRT668781 DAAM1 dishevelled associated activator of morphogenesis 1 2 4
MIRT688559 DCAF16 DDB1 and CUL4 associated factor 16 2 2
MIRT695393 WDR41 WD repeat domain 41 2 2
MIRT698680 TCEA1 transcription elongation factor A1 2 2
MIRT700974 PDIA6 protein disulfide isomerase family A member 6 2 2
MIRT705055 C5orf15 chromosome 5 open reading frame 15 2 2
MIRT705864 AFF1 AF4/FMR2 family member 1 2 2
MIRT710586 CDCA4 cell division cycle associated 4 2 2
MIRT713904 IGF2R insulin like growth factor 2 receptor 2 2
MIRT717133 SKI SKI proto-oncogene 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-4 Dexamethasone approved 5743 Microarray primary rat thymocytes 20847043 2010 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4480 Cisplatin 5460033 NSC119875 approved sensitive cell line (CIS)
hsa-miR-4480 Cisplatin 5460033 NSC119875 approved resistant cell line (A549)

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