pre-miRNA Information
pre-miRNA hsa-mir-6769b   
Genomic Coordinates chr1: 206474803 - 206474864
Description Homo sapiens miR-6769b stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6769b-3p
Sequence 42| CCCUCUCUGUCCCACCCAUAG |62
Evidence Experimental
Experiments Meta-analysis
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN26671848 9 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs555627187 3 dbSNP
rs782102173 4 dbSNP
rs201952639 7 dbSNP
rs782001154 9 dbSNP
rs1488064450 15 dbSNP
rs782111367 16 dbSNP
rs370859899 18 dbSNP
rs1305197911 19 dbSNP
Putative Targets

Gene Information
Gene Symbol FBXO9   
Synonyms FBX9, NY-REN-57, VCIA1, dJ341E18.2
Description F-box protein 9
Transcript NM_012347   
Other Transcripts NM_033480 , NM_033481   
Expression
Putative miRNA Targets on FBXO9
3'UTR of FBXO9
(miRNA target sites are highlighted)
>FBXO9|NM_012347|3'UTR
   1 AGCCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAAGAGCACCTAAGTTATAAATGTGTG
  81 TGTGTGCGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATATATGGAATTGGAACTTAT
 161 TTTAAATTGTTGGAGTTCTTTTAAGAAGAATATAAATTGATTATTTTTTTTATTTAAAGGGATAGTTGATTCCTGGGGTG
 241 TTTTGAAATTAAGTTGGAATTAAGTTGCTTAAGCATATTTATGTTGTGAGAAACCTTAATATGAGGTTTATCATGCCCTT
 321 TTTCAAGCAGATTTATGAGCAGATTTCTGTCACATAAGTCGTCTTCTGCTTGAGTATCCTAATATTTCAATGCATCAGGG
 401 GAGCGCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGCTCAAAGTGTGAGAACCTGT
 481 TCTGGATTTGTTTGAAATTATTTCACCAATAAAGATCATAAATAAATGTTTCTTTCAAGAAAATATATTTGGATGGCCTT
 561 TTTAAAGTAACAGGATATTTAATAAGAGTCCTAGATAGCCAGCGGAGACTTTAAGAATCATTGCCTCTAGCTGGGTGTGG
 641 TGGCATGCACCTGTAGTCCCAGCTATTTGGGAGGCTGATGCAGGAGAATAGCTTAAGCCCAGGAATTTGAGTCTGGGAGT
 721 TTGAGTCCAGCATGGGCAACATAACAAGACCCCATCCCTTATTAAAAGAAAAAAAAATAATTCCTCATTTCATCATTGGT
 801 CTTTATATGTAGCCACAAACACTGACCTCATGTAGGCACCTTACCAATATATGACATTAAGTGAGAGTGAATCCCTTAGG
 881 ACTGGAACACTTCAAGCTCAACCAACTGACTCAGTTGTCATTCTTCACAAAAGAATAGTAGAGGATCATGTAAACCTGAG
 961 CCTAACTCTTGTTCCAGTATGAAAGTTGGGGGAGAGCACCAGCCACCTAGGAAAACTGTATGTTACCTTTTTACTCAAAG
1041 GAGTCCCCCCTGCCCAGTAACAGTCCTATTAGTGTTTAATTTCAGAGTTTGTGTCTGGTAGACCTCTACCTGATTCAGAT
1121 TTGGTTTTGTTGTTTCAACCATAGTTAGAGACAAATTCTCATGTACTTTCAGAAATCAATATCTGCAGCCACTGTTACTT
1201 TTAATTGACATTAAGAGACACTTCATAGGTTCCCACAATTCAGTATGGGATAGGCTTTTTAAAAAGCACATACAGACCAG
1281 GCGTGGTGGCTCATGCCTATAATCCCAGCACTTTGGGAGGCTAAGACAGGCAGATCACCTGAGCTCAGGAGTCCAAGACC
1361 AGCCTGGGCAACATGGCAAAACACCGTCTCTACAAAAAAAAAAAAAAAAAAAATTAGCCAAGTACAGTGGGGCACACCTA
1441 TAGTCGCAGCTACTTGGGAGGCTGGGGCAGGAGAATTGCCTGAGCCTGGGAAGTGGAAGTTGCAGTGAGCCAAGATCGTG
1521 CCATTCCACTCCAGCCTGAGCAACACAGTGAGACCCTATCTCAAAAAAATAATGATGATAGTACACGTTATGTTAAAGGT
1601 GAAATGTGCATACAGAAGGAAGAGAGTTGGCCAGGTGTGGTGACTCACACCTATAATCCCAATACTTTGGGAGGCCAAGG
1681 CAGGAGGATTGCTTGAGGTCAGGAGTTTTAGACCAGCCTGGACAACATAGCAAGACCTCATCTCTTCTAAAAATTAAAAA
1761 AAAAAAAAATAGGCATGGTGGTACACACCTGTGGTCCCAGCTAGTTGGGAGGCTAAGGCAGGAGGATCACTTAGCCAGGA
1841 GGCTGAGGCTACAGTGAGCCAAGATTGCACCACTGTGCTCCAGCCTGGGTGAGAAAGCGAGACCCTGTCTCAAAAAAGAA
1921 AAAAAAGAGAGGTTGGCCTTTTGTAGCAATCTGAGAAGTGTGTTTTTCAAGTTGGAAAGGAAGGAGAAAAGCAACTTGCC
2001 TAAGATAAGGTAGCTCTTCATGATATGACTGTTATTTCTGATATACAAATAAATAGAACATGATTAGGACATAGTCAAAT
2081 ATAGCTAGAAAAATATATTCCTAAGGAAAGTGAGATTTGAGGAGTCCCTGTTGTTCTGCAACATCCCTAGATTGAATGAT
2161 CTGTTGCAGATGGTGGATACCAAGTTCAAATTTAAAGATTTCTTTGTAAGCAGTAAAGTGACTTTCACTTATTTAACTTA
2241 GAACTGGAAAAAGTAACTTTTTTCCAGATTACATTTTCTGTATATTTGTAAAATGCAAAAGCAATATATATTTGTTGTGA
2321 GAAAATTAGAATATACAGATAAAATAAAATTTAAAAAAACACCCAAAGATAACCAGAAGAAAATTTTTGCTATGTAACCT
2401 TTTTCTTCTGGTCTTTGCAAATCCTGCCGTAGAAACTTTTTAACTTCAGGAGTGTCCTTCCTTTGCTCTATTAGGACATT
2481 ACAGAAACCAATACTATGAAAAGCTGACAGCAGTATCTGGATTAACTTTTTAAAAACAATGAAAGCATTTTACAGAAATT
2561 ACATTTCAGATCGTGCTGGAACTGTGTTCAGAAGATATCCTCAGAGGGAATCTGGCCTGAGCACCATCATGTTTAATTGC
2641 CTCCTCCTGTCTTGCATTTTCCTCCCAGCCCCCTTCCTACCCCTTAGCAGAGGGCCAGGTGAGGGTGCTTGGGGCCCATG
2721 GGGGCTGGGAGTGTAGACTTCAGTTACACCCCCAGCCCCCAGGGGAAAGCATTAGCCTTGAATCCTCAATCCCAGGCCCT
2801 CTACTAACCACTCTCAACCTATGGTATTTATCTTTTGATTATTCTGTGCATCTATAAAAATGGGATTATATTGTACAGAA
2881 TGCTTTGTAAGCTTTCTCTCCCCACATAAGAATGCCCTGTAAGCATTTTGTTAAATATTTTTAATGACTTTAGAGTCCAA
2961 CTTTATACTCCTCTTTACGCATTTTGGTTTTCTAATTTAATGGTAGTGTAAACGTTTTTGGAATAAACATTCCTGTGGCT
3041 AAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' gauacccacccUGUCUCUCCc 5'
                     | ||||||| 
Target 5' aaaaagaaaaaAAAGAGAGGt 3'
1913 - 1933 142.00 -9.60
2
miRNA  3' gauacccacCCUGUCUCUCcc 5'
                   ||| ||||||  
Target 5' catacagaaGGA-AGAGAGtt 3'
1609 - 1628 127.00 -9.50
3
miRNA  3' gauACCCACCCUGUCUCUCCc 5'
             |||| ||   ||| ||| 
Target 5' cttTGGGAGGCTAAGACAGGc 3'
1311 - 1331 126.00 -14.00
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31543651 45 COSMIC
COSN31582346 46 COSMIC
COSN30628850 47 COSMIC
COSN32055625 51 COSMIC
COSN14234163 52 COSMIC
COSN2525936 75 COSMIC
COSN28796109 76 COSMIC
COSN31526663 95 COSMIC
COSN20047818 97 COSMIC
COSN31606540 196 COSMIC
COSN26642052 306 COSMIC
COSN24388197 320 COSMIC
COSN28794739 336 COSMIC
COSN28643959 400 COSMIC
COSN24382733 406 COSMIC
COSN30607229 540 COSMIC
COSN7886659 737 COSMIC
COSN28201117 1592 COSMIC
COSN2166421 2098 COSMIC
COSN1334520 2227 COSMIC
COSN28201124 2375 COSMIC
COSN22860317 2505 COSMIC
COSN7791723 2507 COSMIC
COSN16113575 2542 COSMIC
COSN15660348 2573 COSMIC
COSN15662527 2879 COSMIC
COSN26246139 2961 COSMIC
COSN31962638 3014 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1210241112 3 dbSNP
rs756588737 5 dbSNP
rs1487940177 7 dbSNP
rs1221970435 11 dbSNP
rs1191311775 19 dbSNP
rs774916146 20 dbSNP
rs997208055 20 dbSNP
rs764608408 22 dbSNP
rs1157518195 24 dbSNP
rs762939593 26 dbSNP
rs757870263 34 dbSNP
rs953060373 47 dbSNP
rs1251143511 48 dbSNP
rs779730192 50 dbSNP
rs529110589 51 dbSNP
rs1451595747 52 dbSNP
rs550622034 55 dbSNP
rs1200183334 63 dbSNP
rs775878268 65 dbSNP
rs1351839203 72 dbSNP
rs1262196296 74 dbSNP
rs549176694 75 dbSNP
rs755980710 75 dbSNP
rs200861564 76 dbSNP
rs1160566056 78 dbSNP
rs534698093 78 dbSNP
rs1455799020 79 dbSNP
rs1188666777 82 dbSNP
rs1411365816 82 dbSNP
rs1476483205 83 dbSNP
rs1379808888 84 dbSNP
rs1478086821 85 dbSNP
rs71757051 86 dbSNP
rs761340822 86 dbSNP
rs1378143327 87 dbSNP
rs2744455 88 dbSNP
rs1234526303 91 dbSNP
rs1421134339 91 dbSNP
rs1283591984 93 dbSNP
rs1318252725 93 dbSNP
rs1328004154 93 dbSNP
rs1353629929 93 dbSNP
rs1431347251 93 dbSNP
rs1163242706 95 dbSNP
rs1165912117 95 dbSNP
rs1186987805 95 dbSNP
rs1215122022 95 dbSNP
rs1215172016 95 dbSNP
rs1244224318 95 dbSNP
rs1253301484 95 dbSNP
rs1288468042 95 dbSNP
rs1388110976 95 dbSNP
rs1411685353 95 dbSNP
rs1433175696 95 dbSNP
rs1449416518 95 dbSNP
rs1463145539 95 dbSNP
rs1464168275 95 dbSNP
rs1475997652 95 dbSNP
rs1195162571 97 dbSNP
rs1204316494 97 dbSNP
rs1204538741 97 dbSNP
rs1221183277 97 dbSNP
rs1245631586 97 dbSNP
rs1272479174 97 dbSNP
rs1274346215 97 dbSNP
rs1285647869 97 dbSNP
rs1295147641 97 dbSNP
rs1322925866 97 dbSNP
rs1336650191 97 dbSNP
rs1348386770 97 dbSNP
rs1365671404 97 dbSNP
rs1392504369 97 dbSNP
rs1439029745 97 dbSNP
rs1439777156 97 dbSNP
rs1476815049 97 dbSNP
rs3203794 97 dbSNP
rs563277583 97 dbSNP
rs565088519 97 dbSNP
rs57607929 97 dbSNP
rs66488734 97 dbSNP
rs66549055 97 dbSNP
rs754172700 97 dbSNP
rs1491317425 98 dbSNP
rs1127834 99 dbSNP
rs1443092889 99 dbSNP
rs1384800455 100 dbSNP
rs398049067 101 dbSNP
rs1331564286 103 dbSNP
rs1235177757 104 dbSNP
rs1308582516 105 dbSNP
rs966395483 106 dbSNP
rs1242563379 107 dbSNP
rs1181398358 108 dbSNP
rs1261472352 109 dbSNP
rs1207687190 111 dbSNP
rs1282199403 111 dbSNP
rs867712700 113 dbSNP
rs1278266143 114 dbSNP
rs1208390661 115 dbSNP
rs1157591130 117 dbSNP
rs1270121946 117 dbSNP
rs1452664059 119 dbSNP
rs1177541523 121 dbSNP
rs1235816011 123 dbSNP
rs1016012723 124 dbSNP
rs1440940314 124 dbSNP
rs1158883306 125 dbSNP
rs1367495787 126 dbSNP
rs1456221888 127 dbSNP
rs962213037 128 dbSNP
rs972187991 129 dbSNP
rs1445942974 131 dbSNP
rs918192390 133 dbSNP
rs1374782950 134 dbSNP
rs1449004314 135 dbSNP
rs1308014537 137 dbSNP
rs1340043067 138 dbSNP
rs970940714 139 dbSNP
rs1267604534 140 dbSNP
rs1336185262 142 dbSNP
rs1475500171 143 dbSNP
rs1198587510 145 dbSNP
rs1256648608 148 dbSNP
rs1180039955 153 dbSNP
rs1458739795 154 dbSNP
rs1482827418 159 dbSNP
rs1242462843 161 dbSNP
rs1216801824 164 dbSNP
rs1044328779 166 dbSNP
rs1331434938 169 dbSNP
rs1266330093 192 dbSNP
rs1227928895 193 dbSNP
rs1177230992 196 dbSNP
rs981035592 197 dbSNP
rs1315489448 198 dbSNP
rs1255109066 203 dbSNP
rs1289781143 204 dbSNP
rs921789811 204 dbSNP
rs974679268 204 dbSNP
rs1421654879 208 dbSNP
rs926641905 220 dbSNP
rs951864323 221 dbSNP
rs936685387 226 dbSNP
rs1369661514 230 dbSNP
rs1162654216 231 dbSNP
rs190773409 235 dbSNP
rs1420001438 239 dbSNP
rs1054315415 244 dbSNP
rs1204074417 247 dbSNP
rs945561484 247 dbSNP
rs1208313881 254 dbSNP
rs1267253145 258 dbSNP
rs940370666 264 dbSNP
rs571264141 268 dbSNP
rs1321576723 269 dbSNP
rs1296753873 276 dbSNP
rs754834366 283 dbSNP
rs1348409098 287 dbSNP
rs537020961 293 dbSNP
rs1436020263 306 dbSNP
rs764487701 307 dbSNP
rs1319517978 310 dbSNP
rs780853828 311 dbSNP
rs917589573 313 dbSNP
rs557384777 314 dbSNP
rs1291248897 318 dbSNP
rs901779581 319 dbSNP
rs997871183 323 dbSNP
rs1199201196 326 dbSNP
rs763582515 329 dbSNP
rs888819418 336 dbSNP
rs1389298566 340 dbSNP
rs1005877697 341 dbSNP
rs1320814386 342 dbSNP
rs763948639 353 dbSNP
rs749928748 355 dbSNP
rs1382638896 359 dbSNP
rs753412896 361 dbSNP
rs114683383 362 dbSNP
rs1251670573 365 dbSNP
rs1207877465 366 dbSNP
rs1473193881 369 dbSNP
rs1340542115 373 dbSNP
rs150344026 375 dbSNP
rs553141731 376 dbSNP
rs558843153 391 dbSNP
rs771115268 399 dbSNP
rs573064308 400 dbSNP
rs981470908 401 dbSNP
rs926890142 404 dbSNP
rs183236765 405 dbSNP
rs186480220 406 dbSNP
rs1309831139 412 dbSNP
rs1257696871 416 dbSNP
rs1369756305 420 dbSNP
rs1173965469 432 dbSNP
rs191027441 433 dbSNP
rs945431953 434 dbSNP
rs1432712925 436 dbSNP
rs575567691 440 dbSNP
rs544576879 441 dbSNP
rs2876 444 dbSNP
rs529182023 450 dbSNP
rs984556598 452 dbSNP
rs933165174 461 dbSNP
rs1274375943 474 dbSNP
rs907633374 477 dbSNP
rs549236241 484 dbSNP
rs1347576972 486 dbSNP
rs1050806771 487 dbSNP
rs1253922076 488 dbSNP
rs888999255 490 dbSNP
rs941710549 507 dbSNP
rs74327114 510 dbSNP
rs897483133 511 dbSNP
rs1464550591 515 dbSNP
rs182692912 516 dbSNP
rs1024729046 520 dbSNP
rs906730714 524 dbSNP
rs1465687428 528 dbSNP
rs1412831973 529 dbSNP
rs752051576 533 dbSNP
rs1471904125 547 dbSNP
rs936155585 558 dbSNP
rs188209949 564 dbSNP
rs1054667148 567 dbSNP
rs891961036 571 dbSNP
rs1199556621 574 dbSNP
rs138018941 575 dbSNP
rs1269496914 589 dbSNP
rs1226105479 600 dbSNP
rs958288397 604 dbSNP
rs989452278 605 dbSNP
rs866977909 614 dbSNP
rs1450098142 627 dbSNP
rs1301115124 630 dbSNP
rs1338506473 635 dbSNP
rs1020937838 647 dbSNP
rs1452195983 651 dbSNP
rs781413408 657 dbSNP
rs1322792407 666 dbSNP
rs966662324 672 dbSNP
rs1411303977 675 dbSNP
rs536676814 678 dbSNP
rs1474038238 679 dbSNP
rs922681755 680 dbSNP
rs1487744949 687 dbSNP
rs933156556 697 dbSNP
rs550548330 699 dbSNP
rs1249577133 706 dbSNP
rs910473654 709 dbSNP
rs1464086556 715 dbSNP
rs1289908880 720 dbSNP
rs941988131 730 dbSNP
rs1037605232 749 dbSNP
rs115168447 751 dbSNP
rs1014745933 753 dbSNP
rs1422928032 763 dbSNP
rs1431536914 764 dbSNP
rs763116330 766 dbSNP
rs1367053893 769 dbSNP
rs759881644 769 dbSNP
rs1300159066 772 dbSNP
rs1433108197 778 dbSNP
rs1344720536 784 dbSNP
rs928949232 785 dbSNP
rs1046190223 788 dbSNP
rs1389286040 797 dbSNP
rs906245317 800 dbSNP
rs969466098 802 dbSNP
rs1002801657 804 dbSNP
rs980393454 807 dbSNP
rs924936406 812 dbSNP
rs1246787202 813 dbSNP
rs1223051698 817 dbSNP
rs1449363433 818 dbSNP
rs1289143695 819 dbSNP
rs1205759148 825 dbSNP
rs1344072534 827 dbSNP
rs1272165728 829 dbSNP
rs936271381 835 dbSNP
rs1033822681 852 dbSNP
rs543409871 854 dbSNP
rs1011135634 856 dbSNP
rs1438787924 866 dbSNP
rs1021160011 874 dbSNP
rs1329381147 896 dbSNP
rs1303127559 897 dbSNP
rs1362857781 899 dbSNP
rs749478343 902 dbSNP
rs966716034 906 dbSNP
rs976686864 907 dbSNP
rs1431845344 911 dbSNP
rs1030179385 916 dbSNP
rs913426494 930 dbSNP
rs192739427 937 dbSNP
rs1245575447 946 dbSNP
rs1366044023 961 dbSNP
rs1035507668 965 dbSNP
rs1182851736 982 dbSNP
rs1040873462 987 dbSNP
rs1272228840 990 dbSNP
rs985936924 995 dbSNP
rs1312556223 1002 dbSNP
rs1279659145 1006 dbSNP
rs910411145 1007 dbSNP
rs1303461450 1011 dbSNP
rs1433398068 1012 dbSNP
rs1342985058 1014 dbSNP
rs1282676616 1021 dbSNP
rs1352604729 1022 dbSNP
rs963206559 1027 dbSNP
rs1237526318 1035 dbSNP
rs1287636157 1040 dbSNP
rs553207056 1046 dbSNP
rs371361797 1049 dbSNP
rs973354146 1050 dbSNP
rs1442021834 1053 dbSNP
rs931980046 1054 dbSNP
rs1220497619 1066 dbSNP
rs1177819659 1077 dbSNP
rs374799268 1094 dbSNP
rs1412359995 1100 dbSNP
rs1050426866 1110 dbSNP
rs887773669 1117 dbSNP
rs1473278062 1119 dbSNP
rs1249608555 1140 dbSNP
rs1176516237 1142 dbSNP
rs1244963496 1144 dbSNP
rs566747572 1155 dbSNP
rs1212554372 1162 dbSNP
rs1014778503 1172 dbSNP
rs1253687828 1180 dbSNP
rs928960635 1183 dbSNP
rs1229155199 1187 dbSNP
rs563385558 1192 dbSNP
rs577228606 1195 dbSNP
rs1013384820 1202 dbSNP
rs1157083863 1206 dbSNP
rs1046071780 1211 dbSNP
rs560551127 1213 dbSNP
rs367757475 1215 dbSNP
rs1445372542 1217 dbSNP
rs1348687778 1236 dbSNP
rs969202995 1237 dbSNP
rs771844599 1238 dbSNP
rs373821086 1247 dbSNP
rs538816155 1252 dbSNP
rs1158325301 1261 dbSNP
rs764362769 1261 dbSNP
rs546283431 1263 dbSNP
rs72936966 1278 dbSNP
rs544825858 1283 dbSNP
rs1011021107 1284 dbSNP
rs1242838809 1293 dbSNP
rs1209562105 1297 dbSNP
rs149089764 1300 dbSNP
rs902734441 1305 dbSNP
rs1322785205 1307 dbSNP
rs56078359 1322 dbSNP
rs1315418779 1329 dbSNP
rs976238824 1333 dbSNP
rs1382453089 1340 dbSNP
rs998154594 1349 dbSNP
rs1029692778 1367 dbSNP
rs1436771052 1368 dbSNP
rs1214256945 1369 dbSNP
rs1385847893 1374 dbSNP
rs1287715054 1375 dbSNP
rs1257266431 1376 dbSNP
rs1458362706 1378 dbSNP
rs1457392050 1379 dbSNP
rs1335741016 1381 dbSNP
rs1351606998 1384 dbSNP
rs1162595168 1386 dbSNP
rs371624357 1387 dbSNP
rs1333631339 1389 dbSNP
rs1176800522 1392 dbSNP
rs1220870721 1394 dbSNP
rs1267795389 1394 dbSNP
rs1309330890 1394 dbSNP
rs1359200040 1394 dbSNP
rs879121798 1394 dbSNP
rs994293179 1394 dbSNP
rs1275752419 1401 dbSNP
rs1230171408 1403 dbSNP
rs1234861174 1424 dbSNP
rs1470617109 1428 dbSNP
rs1027392680 1429 dbSNP
rs1294394444 1441 dbSNP
rs1181709418 1444 dbSNP
rs932121383 1446 dbSNP
rs1050458602 1447 dbSNP
rs909243445 1450 dbSNP
rs1423874595 1453 dbSNP
rs1370944268 1455 dbSNP
rs942014572 1456 dbSNP
rs954166804 1462 dbSNP
rs1166330305 1464 dbSNP
rs1371621773 1468 dbSNP
rs1192704267 1470 dbSNP
rs374779159 1482 dbSNP
rs1433891287 1489 dbSNP
rs1036243491 1492 dbSNP
rs1197932964 1497 dbSNP
rs1007015668 1503 dbSNP
rs1253008200 1506 dbSNP
rs75033126 1510 dbSNP
rs879447069 1515 dbSNP
rs143686698 1516 dbSNP
rs138319255 1518 dbSNP
rs919196781 1519 dbSNP
rs1046259365 1520 dbSNP
rs1298473217 1522 dbSNP
rs1446823721 1526 dbSNP
rs1282003598 1529 dbSNP
rs1309767895 1531 dbSNP
rs542945753 1533 dbSNP
rs1233629565 1537 dbSNP
rs9474386 1538 dbSNP
rs1032070661 1545 dbSNP
rs528309224 1548 dbSNP
rs545908547 1549 dbSNP
rs1480145188 1551 dbSNP
rs561941866 1555 dbSNP
rs1184932092 1557 dbSNP
rs1196870972 1559 dbSNP
rs1250197816 1561 dbSNP
rs1009203391 1563 dbSNP
rs1020958274 1565 dbSNP
rs967696729 1568 dbSNP
rs937670268 1570 dbSNP
rs923493958 1572 dbSNP
rs116488082 1575 dbSNP
rs1236730435 1581 dbSNP
rs914941037 1588 dbSNP
rs371890988 1591 dbSNP
rs1396845066 1600 dbSNP
rs1404696547 1604 dbSNP
rs776096900 1606 dbSNP
rs1334967302 1608 dbSNP
rs1423599255 1611 dbSNP
rs1469392299 1613 dbSNP
rs1477127093 1623 dbSNP
rs1162031394 1628 dbSNP
rs942036020 1629 dbSNP
rs1042505768 1631 dbSNP
rs902677346 1636 dbSNP
rs1419633604 1637 dbSNP
rs919241928 1640 dbSNP
rs757338890 1643 dbSNP
rs1331823003 1651 dbSNP
rs1202611781 1654 dbSNP
rs62412986 1662 dbSNP
rs1269431367 1668 dbSNP
rs1203315298 1671 dbSNP
rs1051781734 1677 dbSNP
rs1046724716 1700 dbSNP
rs889829095 1701 dbSNP
rs567260050 1702 dbSNP
rs1007271158 1715 dbSNP
rs1380270334 1729 dbSNP
rs1053541020 1744 dbSNP
rs1415220297 1748 dbSNP
rs1297321067 1749 dbSNP
rs1338423630 1755 dbSNP
rs1320295750 1756 dbSNP
rs530661044 1756 dbSNP
rs879043915 1756 dbSNP
rs1229501496 1757 dbSNP
rs1270629975 1771 dbSNP
rs893521077 1773 dbSNP
rs1449621519 1774 dbSNP
rs1017024289 1776 dbSNP
rs962766157 1778 dbSNP
rs985462260 1780 dbSNP
rs994683549 1782 dbSNP
rs1486760428 1783 dbSNP
rs1357038761 1787 dbSNP
rs185176687 1790 dbSNP
rs774754726 1807 dbSNP
rs1366269791 1821 dbSNP
rs982089868 1824 dbSNP
rs142758753 1849 dbSNP
rs1243155840 1853 dbSNP
rs997803507 1857 dbSNP
rs1030979553 1858 dbSNP
rs1364103030 1868 dbSNP
rs1163268004 1874 dbSNP
rs764683706 1884 dbSNP
rs1391707952 1886 dbSNP
rs1165765592 1895 dbSNP
rs1477420132 1899 dbSNP
rs2397138 1900 dbSNP
rs986220652 1904 dbSNP
rs915011022 1908 dbSNP
rs1489820555 1910 dbSNP
rs1267935570 1911 dbSNP
rs1205690390 1912 dbSNP
rs1212975858 1912 dbSNP
rs1275438547 1912 dbSNP
rs570967517 1912 dbSNP
rs1275440982 1919 dbSNP
rs1338858044 1919 dbSNP
rs76374032 1920 dbSNP
rs946497971 1923 dbSNP
rs1434941592 1924 dbSNP
rs538872697 1925 dbSNP
rs963463263 1926 dbSNP
rs1356622944 1933 dbSNP
rs1326472453 1934 dbSNP
rs1408972252 1939 dbSNP
rs978345376 1942 dbSNP
rs919287249 1955 dbSNP
rs1479167320 1958 dbSNP
rs570469164 1961 dbSNP
rs924151610 1967 dbSNP
rs934147264 1968 dbSNP
rs1358406068 1972 dbSNP
rs765884850 1973 dbSNP
rs1202696296 1975 dbSNP
rs79293688 1978 dbSNP
rs1279579716 1980 dbSNP
rs538343906 1984 dbSNP
rs1225506469 1989 dbSNP
rs942737013 1992 dbSNP
rs1321465496 1993 dbSNP
rs139004735 1995 dbSNP
rs928221194 2013 dbSNP
rs898483839 2016 dbSNP
rs994275597 2017 dbSNP
rs937829841 2021 dbSNP
rs1278080167 2033 dbSNP
rs1441045800 2038 dbSNP
rs1025729920 2039 dbSNP
rs893636812 2047 dbSNP
rs1467816998 2055 dbSNP
rs886305654 2056 dbSNP
rs1350400225 2072 dbSNP
rs1003752709 2074 dbSNP
rs1420728867 2076 dbSNP
rs1034946268 2083 dbSNP
rs1176463330 2093 dbSNP
rs1472999579 2097 dbSNP
rs1238312652 2098 dbSNP
rs1285501601 2104 dbSNP
rs1349017626 2113 dbSNP
rs1460056963 2116 dbSNP
rs900856537 2123 dbSNP
rs1209911872 2131 dbSNP
rs1319194564 2144 dbSNP
rs766749556 2153 dbSNP
rs1380319029 2169 dbSNP
rs1263101269 2171 dbSNP
rs1451504173 2174 dbSNP
rs1449962501 2180 dbSNP
rs959528187 2184 dbSNP
rs1196212966 2205 dbSNP
rs998233026 2207 dbSNP
rs1320569144 2214 dbSNP
rs990740191 2214 dbSNP
rs1254318924 2218 dbSNP
rs1343428950 2219 dbSNP
rs1454288451 2220 dbSNP
rs1405792734 2228 dbSNP
rs374818167 2233 dbSNP
rs1185696237 2238 dbSNP
rs1442937962 2241 dbSNP
rs1242624185 2245 dbSNP
rs1187246221 2249 dbSNP
rs1486888077 2257 dbSNP
rs1259533293 2258 dbSNP
rs1322731230 2258 dbSNP
rs1294315505 2264 dbSNP
rs79411678 2264 dbSNP
rs889403137 2271 dbSNP
rs1358352859 2281 dbSNP
rs1007754968 2283 dbSNP
rs141561662 2301 dbSNP
rs977846533 2302 dbSNP
rs1158900498 2307 dbSNP
rs1437064355 2316 dbSNP
rs923660210 2325 dbSNP
rs972190786 2328 dbSNP
rs1390013098 2329 dbSNP
rs1423753871 2330 dbSNP
rs1384919480 2332 dbSNP
rs1171368919 2336 dbSNP
rs187528225 2339 dbSNP
rs1186449811 2353 dbSNP
rs1259694987 2353 dbSNP
rs1490638697 2353 dbSNP
rs1327773501 2354 dbSNP
rs970760111 2355 dbSNP
rs1373297578 2356 dbSNP
rs1229099903 2363 dbSNP
rs1305293043 2365 dbSNP
rs1294158569 2373 dbSNP
rs982481599 2376 dbSNP
rs1441672303 2391 dbSNP
rs987352670 2392 dbSNP
rs926608276 2393 dbSNP
rs937945855 2396 dbSNP
rs1298990910 2400 dbSNP
rs1308824946 2409 dbSNP
rs989385180 2414 dbSNP
rs1334179959 2417 dbSNP
rs1480799898 2424 dbSNP
rs140493828 2426 dbSNP
rs1197863202 2429 dbSNP
rs911493102 2430 dbSNP
rs1261672397 2437 dbSNP
rs942972308 2440 dbSNP
rs1479423001 2445 dbSNP
rs573173320 2445 dbSNP
rs1212380755 2454 dbSNP
rs1203829131 2456 dbSNP
rs1275524526 2458 dbSNP
rs1468556613 2459 dbSNP
rs1281320412 2466 dbSNP
rs1372807680 2469 dbSNP
rs898535805 2471 dbSNP
rs1350889307 2472 dbSNP
rs1308802832 2474 dbSNP
rs1389443619 2475 dbSNP
rs866479104 2483 dbSNP
rs1394684200 2518 dbSNP
rs900887895 2522 dbSNP
rs1470370907 2525 dbSNP
rs1408332452 2527 dbSNP
rs933750822 2528 dbSNP
rs929952276 2540 dbSNP
rs1047184607 2542 dbSNP
rs1184495725 2546 dbSNP
rs1417701675 2548 dbSNP
rs1249432290 2555 dbSNP
rs889434925 2562 dbSNP
rs1182332573 2569 dbSNP
rs150909667 2573 dbSNP
rs1003395768 2574 dbSNP
rs1035237758 2584 dbSNP
rs866745063 2591 dbSNP
rs1351383053 2592 dbSNP
rs899352200 2617 dbSNP
rs1236661624 2621 dbSNP
rs756254590 2640 dbSNP
rs535200900 2645 dbSNP
rs1012617454 2647 dbSNP
rs1385095983 2648 dbSNP
rs1334720440 2649 dbSNP
rs1469346637 2652 dbSNP
rs994037744 2661 dbSNP
rs1395059148 2662 dbSNP
rs192384977 2666 dbSNP
rs967696520 2673 dbSNP
rs999109952 2682 dbSNP
rs9296699 2684 dbSNP
rs1307904573 2698 dbSNP
rs959343495 2699 dbSNP
rs139338813 2705 dbSNP
rs986551467 2710 dbSNP
rs116371960 2713 dbSNP
rs1349732420 2714 dbSNP
rs1292150821 2717 dbSNP
rs964244039 2720 dbSNP
rs1247011227 2728 dbSNP
rs1295706373 2731 dbSNP
rs1336069677 2732 dbSNP
rs966580195 2735 dbSNP
rs978291773 2744 dbSNP
rs529677610 2748 dbSNP
rs922450836 2750 dbSNP
rs933761487 2757 dbSNP
rs1320880248 2758 dbSNP
rs974357566 2760 dbSNP
rs1380958140 2763 dbSNP
rs546168551 2780 dbSNP
rs920143115 2783 dbSNP
rs566868768 2804 dbSNP
rs1426941210 2814 dbSNP
rs910905091 2823 dbSNP
rs1196024787 2832 dbSNP
rs1162506593 2847 dbSNP
rs1475467072 2851 dbSNP
rs1255004149 2856 dbSNP
rs1047072476 2873 dbSNP
rs1190944234 2876 dbSNP
rs777732107 2878 dbSNP
rs941000736 2879 dbSNP
rs1446299604 2880 dbSNP
rs938788436 2885 dbSNP
rs1055880570 2888 dbSNP
rs749514315 2900 dbSNP
rs1224538415 2903 dbSNP
rs899373185 2905 dbSNP
rs993762058 2911 dbSNP
rs1227909464 2918 dbSNP
rs1340156678 2936 dbSNP
rs1271944487 2937 dbSNP
rs1011999084 2946 dbSNP
rs532656071 2947 dbSNP
rs1463529270 2956 dbSNP
rs184877475 2977 dbSNP
rs2744456 2979 dbSNP
rs1413366838 2980 dbSNP
rs1322508562 2988 dbSNP
rs999157733 2993 dbSNP
rs1315176323 3010 dbSNP
rs150036688 3014 dbSNP
rs1421045322 3015 dbSNP
rs1165712526 3024 dbSNP
rs955051569 3030 dbSNP
rs374085959 3031 dbSNP
rs1293970714 3034 dbSNP
rs1008435244 3036 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084065. RNA binding protein: AGO2. Condition:CLIP_emetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gauacccacccUGUCUCUCCc 5'
                     | ||||||| 
Target 5' ----------aAAAGAGAGGu 3'
1 - 11
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084065
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_emetine_AbnovaAb
Location of target site ENST00000244426.6 | 3UTR | AAAAGAGAGGUUGGCCUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
209 hsa-miR-6769b-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT181753 UHMK1 U2AF homology motif kinase 1 2 2
MIRT287119 SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 2 2
MIRT395372 CDC42EP4 CDC42 effector protein 4 2 4
MIRT472533 NACC1 nucleus accumbens associated 1 2 4
MIRT472611 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 2 2
MIRT482405 ADRB1 adrenoceptor beta 1 2 10
MIRT492330 SETD1B SET domain containing 1B 2 2
MIRT499238 VAV3 vav guanine nucleotide exchange factor 3 2 6
MIRT512274 ARHGDIA Rho GDP dissociation inhibitor alpha 2 6
MIRT534548 RUNX1 runt related transcription factor 1 2 2
MIRT535374 PEX5L peroxisomal biogenesis factor 5 like 2 2
MIRT535424 PDZD8 PDZ domain containing 8 2 2
MIRT539329 AHSA2 activator of HSP90 ATPase homolog 2 2 4
MIRT569350 EFHC1 EF-hand domain containing 1 2 2
MIRT576116 Klf6 Kruppel-like factor 6 2 2
MIRT607241 LINS lines homolog 1 2 4
MIRT607364 ASAH2 N-acylsphingosine amidohydrolase 2 2 4
MIRT609572 CATSPER4 cation channel sperm associated 4 2 2
MIRT610045 SERPINA3 serpin family A member 3 2 2
MIRT610284 PLCXD3 phosphatidylinositol specific phospholipase C X domain containing 3 2 2
MIRT610302 KLHL21 kelch like family member 21 2 2
MIRT610393 FOXE1 forkhead box E1 2 2
MIRT610432 ASAH2B N-acylsphingosine amidohydrolase 2B 2 2
MIRT610510 BARHL2 BarH like homeobox 2 2 2
MIRT611818 FCRL4 Fc receptor like 4 2 2
MIRT612755 MYOCD myocardin 2 2
MIRT613698 QPRT quinolinate phosphoribosyltransferase 2 2
MIRT613917 POU3F1 POU class 3 homeobox 1 2 2
MIRT615153 URGCP-MRPS24 URGCP-MRPS24 readthrough 2 2
MIRT615201 CLUAP1 clusterin associated protein 1 2 2
MIRT615338 ABCC12 ATP binding cassette subfamily C member 12 2 2
MIRT616706 UBXN2A UBX domain protein 2A 2 2
MIRT617186 GOSR2 golgi SNAP receptor complex member 2 2 4
MIRT617526 SORCS2 sortilin related VPS10 domain containing receptor 2 2 2
MIRT617596 NUDT5 nudix hydrolase 5 2 4
MIRT617763 C17orf105 chromosome 17 open reading frame 105 2 2
MIRT618613 SHOX short stature homeobox 2 2
MIRT619301 FAM26E calcium homeostasis modulator family member 5 2 2
MIRT619515 TXLNB taxilin beta 2 2
MIRT619925 NLRP9 NLR family pyrin domain containing 9 2 2
MIRT619942 C8orf33 chromosome 8 open reading frame 33 2 2
MIRT620025 NFAM1 NFAT activating protein with ITAM motif 1 2 2
MIRT620554 C10orf10 chromosome 10 open reading frame 10 2 4
MIRT620752 CCR5 C-C motif chemokine receptor 5 (gene/pseudogene) 2 2
MIRT621798 TMEM233 transmembrane protein 233 2 2
MIRT621843 TGFBR3 transforming growth factor beta receptor 3 2 2
MIRT622693 PLSCR1 phospholipid scramblase 1 2 2
MIRT622733 PITPNM3 PITPNM family member 3 2 2
MIRT623004 ONECUT3 one cut homeobox 3 2 2
MIRT623211 MTFR1L mitochondrial fission regulator 1 like 2 2
MIRT623771 GPR37L1 G protein-coupled receptor 37 like 1 2 2
MIRT624119 DNAH10OS dynein axonemal heavy chain 10 opposite strand 2 2
MIRT624150 DIAPH1 diaphanous related formin 1 2 2
MIRT624443 CAMK2N1 calcium/calmodulin dependent protein kinase II inhibitor 1 2 2
MIRT624855 ABI2 abl interactor 2 2 2
MIRT625311 SHISA6 shisa family member 6 2 2
MIRT625741 MTSS1 MTSS1, I-BAR domain containing 2 2
MIRT626292 ZNF85 zinc finger protein 85 2 2
MIRT627400 TMEM170A transmembrane protein 170A 2 2
MIRT627464 SYNRG synergin gamma 2 2
MIRT627913 KANSL1 KAT8 regulatory NSL complex subunit 1 2 2
MIRT636508 GDAP1L1 ganglioside induced differentiation associated protein 1 like 1 2 2
MIRT636910 KIAA0408 KIAA0408 2 2
MIRT637302 ACTN2 actinin alpha 2 2 2
MIRT638230 SOGA3 SOGA family member 3 2 2
MIRT639880 STC1 stanniocalcin 1 2 2
MIRT639999 PHF21B PHD finger protein 21B 2 2
MIRT640149 CEP104 centrosomal protein 104 2 2
MIRT640699 SKI SKI proto-oncogene 2 2
MIRT640911 RAB13 RAB13, member RAS oncogene family 2 2
MIRT641518 CREBBP CREB binding protein 2 2
MIRT641990 OXSR1 oxidative stress responsive 1 2 2
MIRT642635 EPPIN epididymal peptidase inhibitor 2 2
MIRT642744 TDRD6 tudor domain containing 6 2 2
MIRT642759 SDHAF2 succinate dehydrogenase complex assembly factor 2 2 2
MIRT642787 CHCHD3 coiled-coil-helix-coiled-coil-helix domain containing 3 2 2
MIRT643054 EPPIN-WFDC6 EPPIN-WFDC6 readthrough 2 2
MIRT643104 NDUFB5 NADH:ubiquinone oxidoreductase subunit B5 2 2
MIRT643316 TMEM151B transmembrane protein 151B 2 2
MIRT643715 ITK IL2 inducible T-cell kinase 2 2
MIRT644087 A4GALT alpha 1,4-galactosyltransferase (P blood group) 2 2
MIRT644112 SEL1L3 SEL1L family member 3 2 2
MIRT644377 ZNF286A zinc finger protein 286A 2 2
MIRT644408 FRMD6 FERM domain containing 6 2 2
MIRT644684 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT644744 CCDC174 coiled-coil domain containing 174 2 2
MIRT644876 C2orf48 chromosome 2 open reading frame 48 2 2
MIRT645417 FAM110A family with sequence similarity 110 member A 2 2
MIRT645928 PLXNA3 plexin A3 2 2
MIRT646181 PTPN14 protein tyrosine phosphatase, non-receptor type 14 2 2
MIRT646554 TMCC2 transmembrane and coiled-coil domain family 2 2 2
MIRT647235 OR6A2 olfactory receptor family 6 subfamily A member 2 2 2
MIRT647263 PTGDR2 prostaglandin D2 receptor 2 2 2
MIRT647660 FOXL1 forkhead box L1 2 2
MIRT648284 TRAPPC2L trafficking protein particle complex 2 like 2 2
MIRT648493 CMBL carboxymethylenebutenolidase homolog 2 2
MIRT648963 TMEM45B transmembrane protein 45B 2 2
MIRT649511 RAB17 RAB17, member RAS oncogene family 2 2
MIRT650446 CPXM2 carboxypeptidase X, M14 family member 2 2 2
MIRT650712 KRT32 keratin 32 2 2
MIRT651069 ZNF518B zinc finger protein 518B 2 4
MIRT651090 ZNF516 zinc finger protein 516 2 2
MIRT651193 ZNF281 zinc finger protein 281 2 2
MIRT651330 ZCCHC2 zinc finger CCHC-type containing 2 2 2
MIRT651445 XKR4 XK related 4 2 2
MIRT651517 WNT4 Wnt family member 4 2 4
MIRT651694 VPS13D vacuolar protein sorting 13 homolog D 2 2
MIRT652173 TRIM66 tripartite motif containing 66 2 2
MIRT652432 TMEM239 transmembrane protein 239 2 2
MIRT652656 TIMM10 translocase of inner mitochondrial membrane 10 2 2
MIRT652707 THBS2 thrombospondin 2 2 2
MIRT652812 TBL2 transducin beta like 2 2 2
MIRT653350 SMG7 SMG7, nonsense mediated mRNA decay factor 2 2
MIRT653471 SLC4A1 solute carrier family 4 member 1 (Diego blood group) 2 2
MIRT653658 SLC27A4 solute carrier family 27 member 4 2 2
MIRT654691 PSMB5 proteasome subunit beta 5 2 2
MIRT654735 PRLR prolactin receptor 2 2
MIRT654931 POLR3D RNA polymerase III subunit D 2 2
MIRT655209 PHAX phosphorylated adaptor for RNA export 2 2
MIRT655346 PCP4L1 Purkinje cell protein 4 like 1 2 2
MIRT655404 PANK1 pantothenate kinase 1 2 2
MIRT655482 PAK3 p21 (RAC1) activated kinase 3 2 2
MIRT655964 NDNF neuron derived neurotrophic factor 2 2
MIRT656017 MYPN myopalladin 2 2
MIRT656491 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 2
MIRT657151 ITGA1 integrin subunit alpha 1 2 2
MIRT657411 HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 2 2
MIRT657608 GRID1 glutamate ionotropic receptor delta type subunit 1 2 2
MIRT658181 FBXO9 F-box protein 9 2 2
MIRT658932 DPY19L1 dpy-19 like C-mannosyltransferase 1 2 2
MIRT659028 DHTKD1 dehydrogenase E1 and transketolase domain containing 1 2 2
MIRT659092 DENR density regulated re-initiation and release factor 2 2
MIRT659204 CYBB cytochrome b-245 beta chain 2 2
MIRT659718 CCDC93 coiled-coil domain containing 93 2 2
MIRT660185 BNC2 basonuclin 2 2 2
MIRT660805 AIFM2 apoptosis inducing factor, mitochondria associated 2 2 2
MIRT660900 ADCY6 adenylate cyclase 6 2 2
MIRT660925 ADAM19 ADAM metallopeptidase domain 19 2 2
MIRT661741 DTHD1 death domain containing 1 2 2
MIRT661998 EFTUD2 elongation factor Tu GTP binding domain containing 2 2 2
MIRT662639 PKHD1L1 PKHD1 like 1 2 2
MIRT664338 RAB8A RAB8A, member RAS oncogene family 2 2
MIRT666743 RALY RALY heterogeneous nuclear ribonucleoprotein 2 2
MIRT667070 PANK3 pantothenate kinase 3 2 2
MIRT667925 IGLON5 IgLON family member 5 2 2
MIRT668488 ETV3 ETS variant 3 2 2
MIRT668610 EHD4 EH domain containing 4 2 2
MIRT669419 ATP9A ATPase phospholipid transporting 9A (putative) 2 2
MIRT669652 ACSBG1 acyl-CoA synthetase bubblegum family member 1 2 2
MIRT674005 KCNN3 potassium calcium-activated channel subfamily N member 3 2 2
MIRT680447 SLCO5A1 solute carrier organic anion transporter family member 5A1 2 2
MIRT684326 GTF3C4 general transcription factor IIIC subunit 4 2 2
MIRT685625 C12orf49 chromosome 12 open reading frame 49 2 2
MIRT689978 ZNF185 zinc finger protein 185 with LIM domain 2 2
MIRT693962 HNRNPA1L2 heterogeneous nuclear ribonucleoprotein A1-like 2 2 2
MIRT698543 TFRC transferrin receptor 2 2
MIRT699982 RREB1 ras responsive element binding protein 1 2 2
MIRT702898 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 2 2
MIRT707383 VCAM1 vascular cell adhesion molecule 1 2 2
MIRT708312 CDH8 cadherin 8 2 2
MIRT708406 GRIN2A glutamate ionotropic receptor NMDA type subunit 2A 2 2
MIRT709299 LDLRAD4 low density lipoprotein receptor class A domain containing 4 2 2
MIRT710326 STK40 serine/threonine kinase 40 2 2
MIRT710729 C19orf68 zinc finger SWIM-type containing 9 2 2
MIRT710970 CMKLR1 chemerin chemokine-like receptor 1 2 2
MIRT711178 EMCN endomucin 2 2
MIRT711590 SETD1A SET domain containing 1A 2 2
MIRT711611 LHX5 LIM homeobox 5 2 2
MIRT711701 GMPR guanosine monophosphate reductase 2 2
MIRT711850 AMOTL2 angiomotin like 2 2 2
MIRT712358 NAT14 N-acetyltransferase 14 (putative) 2 2
MIRT712377 MTPN myotrophin 2 2
MIRT712469 KCNC3 potassium voltage-gated channel subfamily C member 3 2 2
MIRT712839 RHOA ras homolog family member A 2 2
MIRT713592 ANKMY1 ankyrin repeat and MYND domain containing 1 2 2
MIRT713982 ASIC4 acid sensing ion channel subunit family member 4 2 2
MIRT714534 ZBTB39 zinc finger and BTB domain containing 39 2 2
MIRT714570 GALNT10 polypeptide N-acetylgalactosaminyltransferase 10 2 2
MIRT714610 EXO5 exonuclease 5 2 2
MIRT714943 ZNF330 zinc finger protein 330 2 2
MIRT715132 ACADL acyl-CoA dehydrogenase, long chain 2 2
MIRT716018 TMPRSS5 transmembrane protease, serine 5 2 2
MIRT716204 TYW3 tRNA-yW synthesizing protein 3 homolog 2 2
MIRT716674 PPP6R1 protein phosphatase 6 regulatory subunit 1 2 2
MIRT717366 EDN2 endothelin 2 2 2
MIRT718110 CRTC1 CREB regulated transcription coactivator 1 2 2
MIRT718502 GYS1 glycogen synthase 1 2 2
MIRT719146 DPYSL5 dihydropyrimidinase like 5 2 2
MIRT719415 B4GALNT3 beta-1,4-N-acetyl-galactosaminyltransferase 3 2 2
MIRT719986 MAPK1 mitogen-activated protein kinase 1 2 2
MIRT720347 BACE2 beta-site APP-cleaving enzyme 2 2 2
MIRT720452 SLC16A5 solute carrier family 16 member 5 2 2
MIRT720493 TMEM178B transmembrane protein 178B 2 2
MIRT720666 C11orf54 chromosome 11 open reading frame 54 2 2
MIRT721091 CCBE1 collagen and calcium binding EGF domains 1 2 2
MIRT721334 IFNAR2 interferon alpha and beta receptor subunit 2 2 2
MIRT721384 MACC1 MACC1, MET transcriptional regulator 2 2
MIRT721508 CARHSP1 calcium regulated heat stable protein 1 2 2
MIRT721827 POU6F1 POU class 6 homeobox 1 2 2
MIRT722136 TTLL11 tubulin tyrosine ligase like 11 2 2
MIRT723070 GGA1 golgi associated, gamma adaptin ear containing, ARF binding protein 1 2 2
MIRT723115 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT723374 ZNF470 zinc finger protein 470 2 2
MIRT724446 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT724528 ATP2B1 ATPase plasma membrane Ca2+ transporting 1 2 2
MIRT724643 PKDREJ polycystin family receptor for egg jelly 2 2
MIRT724711 CRAMP1L cramped chromatin regulator homolog 1 2 2
MIRT724750 ZNF391 zinc finger protein 391 2 2
MIRT724770 PSG4 pregnancy specific beta-1-glycoprotein 4 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-6769b Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-mir-6769b Docetaxel+Cisplatin+5-Fluorouracil sensitive tissue (hypopharyngeal squamous cell carcinoma)
hsa-miR-6769b-3p Osimertinib 71496458 NSC779217 approved sensitive cell line (PC9)
hsa-miR-6769b-3p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-6769b-3p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)

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