pre-miRNA Information
pre-miRNA hsa-mir-3120   
Genomic Coordinates chr1: 172138808 - 172138888
Description Homo sapiens miR-3120 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3120-5p
Sequence 13| CCUGUCUGUGCCUGCUGUACA |33
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 19 1 + 172138838 26449202, 27587585 MiREDiBase
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN26637643 8 COSMIC
COSN31603497 11 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs750386761 8 dbSNP
rs760725207 9 dbSNP
rs766486759 10 dbSNP
rs754055278 12 dbSNP
rs755288536 19 dbSNP
rs754726014 21 dbSNP
Putative Targets

Gene Information
Gene Symbol EXOC7   
Synonyms 2-5-3p, BLOM4, EX070, EXO70, EXOC1, Exo70p, YJL085W
Description exocyst complex component 7
Transcript NM_001013839   
Other Transcripts NM_001145297 , NM_001145298 , NM_001145299 , NM_015219   
Expression
Putative miRNA Targets on EXOC7
3'UTR of EXOC7
(miRNA target sites are highlighted)
>EXOC7|NM_001013839|3'UTR
   1 GCCTGCTGCTAGCCCTGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCT
  81 GGGTGAGCTTGAAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCCTGAGCCCCCTAGTCCTGGC
 161 TCCTGCTTTTTCCCCACAGCCCGTGTTCCCAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCT
 241 TTTATGACCCTGATGGCTTCTGAAACAGGAAAAGAGAGAAGGAAGACAGAGGCCTGTGCCCACTGCTGCTCCATGTGTAC
 321 CAAGAGCAGCAGGGCAGAAGGGCCCTCCCTCCAGCCTAGGTCAGAGGTGGGGACAGAGAACTCCCCTACAGCCCAGAGAT
 401 GTGGCAGGGCTCAGAGAAGCAGCCAGAGCTCCTGGAGGAAAGGCAGTCGGGACTGACCCCCTCTCTTAAAACACATTCCC
 481 GCCCGCCCACAGGCCTGAGGTCTGGGACCTTTCCCTCCCAGGAGTCCCCTAGGTGGCTGGGGGAGGCAGGCTCACTGGCC
 561 ATTTTCCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCCACCCTCTACAGCCTTCCTCAGGCC
 641 CCTGTCTCTGGCCCCCAGCCTCAGTGCCTCTTGGCCCAGGGCCAGGCAGTCGTGGTTGCAGAAGGAGCAATTAGGCTGCC
 721 TGCCTGTGGGCTGGGAGACAGGGACAATGGGGAAAAGTTAAGGAGCAAAATGGGGGTTGGAAGCAAAAAATAGGGCCCCA
 801 CCTATTTAGGACGAGATTGAAGACTGACCCTTGAGGCACACTTGCACTGGAGATGGGTTTATTTCACGCTCTGTGCTTGT
 881 GTGCTAGCGGAGGGAGAGCTCAGGGTGGCTTAATCCAGAGGCCCTGTCATGGCCCGCCCCCAGCCATGGGAAAGCAAACT
 961 TCATCCTAAGGTGTGCAGCCCAGGCCCTGCCCCTTTACAGTCTAGGCCGCCTGCCATGGGGTGCAGCCTCTCCAGGGGCT
1041 GCGTCAGACTTGCACGCTGCCCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACAGCACCCCAACCACATACACGAG
1121 GAAGAAGATGCGGTCAGCAGTCTCAGGCCAGCTTCTCTGTGACCCCTTTACTCCTCTGGAGGGCTCTGTGGGGAGAGATA
1201 CAGGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACATGAGCGGAAGAGCGAACCCCAGGGGTCATCAGCCTGTATCGCTT
1281 CCTTTCTTAGATTCTCAGCTGATGAAAATTTGGGTCTGGCCCATTTCAGGCCATCTTCAGTTGAAGAAACACCCTCTTAG
1361 GCTGTGCAAGGCATGGGTTATCAGGGGATTGAGGTCACCTGGGACTTCAGGGAGGCTCAGCTTGCTCCCTGCCCCAGACC
1441 TGTTTCTTCTAAGGGAGGAGGACATGGTGGAGACCAGGGACAGGAGAGCCAGCAGGGTGGATGCAAGGGGCCTCTACCCA
1521 CACCTGGACCTCCGTGCCCTCACCCCAGCCCTAGGTGTGCACCTAGGCCTCATTCCTTACCCCCCAGCCCCTGCCCACCT
1601 TCAGCAGGATGAGGCCCTGGGTTGCCGTGCTCTCGCTGTTCCCCTCTCGGGGCTGGGCTGGGGCCGCTCTTGGCCCCAAG
1681 GTTGCCCCGGGCCAGCAGCCCAGCCAGCAGCACAGTCTCTATGGTGCTGAGGAAGAGCAGCAGCAGCAGGATGGTGAAGT
1761 AGTAAACTGGGGGAGGCAGGGCACAGGGAGATGCTCAGGGGCCAGTCCCTGTGTCTCTGGTGCCCAGCGAGCTGAGCACC
1841 AGTGGGTGACCGGGGAGAAACAGGGCAGACTGGGTAAGGGAGCAGGGCTTACTGAGCAGTGGGTTGCAGGAGGAGGAGCT
1921 GGGCAGGGCCTGCACCAGGGAGGAGTGGAGGACGAGGTAACTCAGCAGCAATGTCACCTTGTAGCCTATGCGCTCAATGG
2001 CCCGGAGGGGCAGCAACCCCCCGCACACGTCAGCCAACAGCAGTGCCTCTGCAGGCACCAAGAGAGCGATGATGGACTTG
2081 AGCGCCGTGTTCTTCAGCCTCAGCTGGAAGGGGAAAAGTCAGGGCCTTCCCGGCGGGGGGGAAGGAGGTGGGCATCGGGG
2161 GCATGGGGCCTGGCCTCTGGCCGTGCATCCTCACTCCCACCCGCCTCCAGCAGCCCTCTGTCGGCCTCCTCCCGACTTGA
2241 CTCACCGTCACCTGGAAGCAGGGCACCAGCTGCTGGGGTGGGACTTGGGTCTTCAGATCATAAACTACGTATTCCCTCTT
2321 GACACTCACAATCTCGTTCACCACGTGGGCCTGGAACTCTAACTCCATCGCTGAGGGGTGGGAATGAGAACTATGAACCA
2401 GGAAGGAGAGATCCCAGCTGCCAAGTCTGGGGGTAGCAGACTGGAGCCCAGGGGTGATGGAGACTTTTGATGGCTTTTGG
2481 CAGGGACAGACTTGGACACAAAACCGATCCATAGAAGGGCTTCCCAAACCTTGTTTTGCAACATCCCAAATTGTCTCCAG
2561 TTGAAGGAAGGCCTTTATCAGATTCATAGATGAGCTTTCATTGTAAAAATAAATGTACTTTGCACCACTTCATGATGGAG
2641 GGAGAAGTGGTCACA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' acaugucGUCCGUGUCUGUCc 5'
                 ||||  |||:||| 
Target 5' cttggccCAGGGCCAGGCAGt 3'
670 - 690 138.00 -14.90
2
miRNA  3' acauGUCGUCCGUGUCUGUCc 5'
              ||||| || ||| ||| 
Target 5' gggcCAGCA-GCCCAGCCAGc 3'
1689 - 1708 132.00 -14.80
3
miRNA  3' acAUGUCGUCCGUGUCUGucc 5'
            | ::||||| ||||||   
Target 5' ctTTTGGCAGGGACAGACttg 3'
2474 - 2494 131.00 -20.40
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30122798 8 COSMIC
COSN30548136 37 COSMIC
COSN31603392 43 COSMIC
COSN30164688 65 COSMIC
COSN30112512 94 COSMIC
COSN30477976 112 COSMIC
COSN30528514 121 COSMIC
COSN31924842 122 COSMIC
COSN32069296 160 COSMIC
COSN5180451 416 COSMIC
COSN31586052 936 COSMIC
COSN30468709 948 COSMIC
COSN26975507 990 COSMIC
COSN26975511 994 COSMIC
COSM8502851 997 COSMIC
COSM8581851 1004 COSMIC
COSM7580259 1008 COSMIC
COSM9235710 1009 COSMIC
COSM5364335 1014 COSMIC
COSM8030855 1018 COSMIC
COSM4139838 1035 COSMIC
COSM5387369 1047 COSMIC
COSM2742954 1057 COSMIC
COSM135775 1074 COSMIC
COSM6016846 1084 COSMIC
COSM9586329 1087 COSMIC
COSM8534635 1102 COSMIC
COSM9526302 1103 COSMIC
COSM9032943 1105 COSMIC
COSM984604 1118 COSMIC
COSM1386137 1131 COSMIC
COSM6824644 1145 COSMIC
COSM2742953 1161 COSMIC
COSM7398145 1161 COSMIC
COSM4564202 1173 COSMIC
COSM5913974 1173 COSMIC
COSM1750331 1176 COSMIC
COSM5693467 1182 COSMIC
COSN31781641 1221 COSMIC
COSN30519653 1230 COSMIC
COSN30525939 1243 COSMIC
COSN30449678 1246 COSMIC
COSN5180450 1250 COSMIC
COSN20674824 1270 COSMIC
COSN30474987 1281 COSMIC
COSN30475074 1282 COSMIC
COSN31482205 1296 COSMIC
COSN5180449 1343 COSMIC
COSN5180448 1346 COSMIC
COSN28229900 1358 COSMIC
COSN30511727 1370 COSMIC
COSN20078778 1380 COSMIC
COSN20762468 1435 COSMIC
COSN5180447 1500 COSMIC
COSN18747885 1579 COSMIC
COSM7948327 1589 COSMIC
COSM8286000 1596 COSMIC
COSM1722966 1598 COSMIC
COSM5470761 1599 COSMIC
COSM9176804 1604 COSMIC
COSM4404349 1606 COSMIC
COSM4828187 1611 COSMIC
COSM7003089 1611 COSMIC
COSM9153739 1616 COSMIC
COSM6502070 1634 COSMIC
COSM6884853 1642 COSMIC
COSM9478117 1642 COSMIC
COSM248399 1648 COSMIC
COSM349446 1651 COSMIC
COSM7722998 1666 COSMIC
COSM7302377 1671 COSMIC
COSM8734076 1673 COSMIC
COSM4069803 1688 COSMIC
COSM3522472 1701 COSMIC
COSM380916 1710 COSMIC
COSM9020853 1710 COSMIC
COSM4562492 1719 COSMIC
COSM1684531 1720 COSMIC
COSM1610802 1724 COSMIC
COSM4455833 1728 COSMIC
COSM4828488 1729 COSMIC
COSM5833405 1752 COSMIC
COSM5768349 1756 COSMIC
COSM6824653 1767 COSMIC
COSN24305962 1784 COSMIC
COSN30115427 1828 COSMIC
COSN24314543 1852 COSMIC
COSN30598058 1858 COSMIC
COSN31531856 1873 COSMIC
COSM5796855 1893 COSMIC
COSM5768350 1894 COSMIC
COSM3522471 1930 COSMIC
COSM5618616 1932 COSMIC
COSM6500390 1938 COSMIC
COSM9331738 1941 COSMIC
COSM7181095 1943 COSMIC
COSM6479706 1954 COSMIC
COSM2742941 1991 COSMIC
COSM5741146 1992 COSMIC
COSM8684221 1997 COSMIC
COSM6008315 2000 COSMIC
COSM8545893 2003 COSMIC
COSM8314349 2016 COSMIC
COSM2742938 2017 COSMIC
COSM8188061 2018 COSMIC
COSM1710819 2021 COSMIC
COSM9001820 2024 COSMIC
COSM5364282 2028 COSMIC
COSM9159858 2029 COSMIC
COSM6147874 2049 COSMIC
COSM6824645 2067 COSMIC
COSM5055796 2068 COSMIC
COSM1386136 2083 COSMIC
COSM3388152 2084 COSMIC
COSM984602 2085 COSMIC
COSM4069802 2086 COSMIC
COSM6824650 2086 COSMIC
COSM8364143 2087 COSMIC
COSM5462709 2104 COSMIC
COSN31526961 2123 COSMIC
COSN27005451 2134 COSMIC
COSN30498659 2134 COSMIC
COSN13748288 2135 COSMIC
COSN30550200 2135 COSMIC
COSN1729065 2138 COSMIC
COSN30479601 2140 COSMIC
COSN30147030 2141 COSMIC
COSN30466670 2151 COSMIC
COSN30100968 2156 COSMIC
COSN28891207 2181 COSMIC
COSN30677252 2183 COSMIC
COSN30156866 2210 COSMIC
COSN4891639 2217 COSMIC
COSN26481882 2224 COSMIC
COSN26975512 2229 COSMIC
COSN15303880 2232 COSMIC
COSM3664803 2239 COSMIC
COSM8604885 2240 COSMIC
COSM7746510 2244 COSMIC
COSM4069801 2246 COSMIC
COSM7462346 2247 COSMIC
COSM2742936 2249 COSMIC
COSM8668333 2260 COSMIC
COSM4069800 2268 COSMIC
COSM5694699 2276 COSMIC
COSM7557713 2304 COSMIC
COSM1189572 2308 COSMIC
COSM5023283 2323 COSMIC
COSM8964368 2324 COSMIC
COSM9202590 2333 COSMIC
COSM3522470 2344 COSMIC
COSM5350414 2354 COSMIC
COSM4741935 2363 COSMIC
COSM233786 2366 COSMIC
COSM9350286 2368 COSMIC
COSM7657838 2373 COSMIC
COSM8186982 2375 COSMIC
COSM7743753 2378 COSMIC
COSN30156452 2410 COSMIC
COSN30520170 2427 COSMIC
COSN31514565 2427 COSMIC
COSN1201414 2431 COSMIC
COSN30514422 2432 COSMIC
COSN30156975 2444 COSMIC
COSN30477718 2484 COSMIC
COSN20961016 2508 COSMIC
COSN30544447 2547 COSMIC
COSN22418066 2566 COSMIC
COSN31483600 2577 COSMIC
COSN31607327 2580 COSMIC
COSN31548928 2589 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1473689225 3 dbSNP
rs748167217 12 dbSNP
rs377309793 16 dbSNP
rs555388505 19 dbSNP
rs754549320 20 dbSNP
rs746624910 21 dbSNP
rs1362797002 22 dbSNP
rs1474400737 33 dbSNP
rs779604859 37 dbSNP
rs758117130 38 dbSNP
rs1369522685 42 dbSNP
rs750738193 44 dbSNP
rs765657201 47 dbSNP
rs1300627184 50 dbSNP
rs1024488231 61 dbSNP
rs946798864 79 dbSNP
rs1212546835 87 dbSNP
rs559705384 91 dbSNP
rs1012740720 105 dbSNP
rs73996111 116 dbSNP
rs1038292097 121 dbSNP
rs570901069 127 dbSNP
rs1005507723 128 dbSNP
rs1314663732 145 dbSNP
rs887034571 146 dbSNP
rs373865233 147 dbSNP
rs960622585 148 dbSNP
rs1484042961 149 dbSNP
rs577361022 152 dbSNP
rs927905024 161 dbSNP
rs1484834636 163 dbSNP
rs922695386 166 dbSNP
rs11539426 170 dbSNP
rs1415048027 175 dbSNP
rs980628255 182 dbSNP
rs563676881 183 dbSNP
rs1392583226 187 dbSNP
rs1431053381 188 dbSNP
rs1374447428 194 dbSNP
rs543689345 195 dbSNP
rs1304358520 199 dbSNP
rs1379707489 208 dbSNP
rs942878710 210 dbSNP
rs915443076 211 dbSNP
rs969652286 218 dbSNP
rs1427082763 222 dbSNP
rs1027345860 236 dbSNP
rs557427223 239 dbSNP
rs1427750491 240 dbSNP
rs994517333 241 dbSNP
rs1191992770 244 dbSNP
rs147177976 246 dbSNP
rs924213537 256 dbSNP
rs977085276 260 dbSNP
rs537837865 261 dbSNP
rs961787413 270 dbSNP
rs568906232 274 dbSNP
rs1250402873 292 dbSNP
rs554118658 300 dbSNP
rs775593717 305 dbSNP
rs1008985503 312 dbSNP
rs188787726 321 dbSNP
rs1051820807 326 dbSNP
rs997013220 329 dbSNP
rs1188620497 331 dbSNP
rs1202401917 337 dbSNP
rs899974318 349 dbSNP
rs1279135407 350 dbSNP
rs79195356 353 dbSNP
rs946746341 355 dbSNP
rs1452731127 356 dbSNP
rs913995297 357 dbSNP
rs1446812000 358 dbSNP
rs1435795290 359 dbSNP
rs769656224 366 dbSNP
rs887003498 367 dbSNP
rs1221030937 369 dbSNP
rs371967997 370 dbSNP
rs939388081 372 dbSNP
rs1047029330 381 dbSNP
rs998176393 383 dbSNP
rs927886022 387 dbSNP
rs981124099 388 dbSNP
rs745664526 389 dbSNP
rs969288510 406 dbSNP
rs1465737427 407 dbSNP
rs920405265 418 dbSNP
rs1298079607 424 dbSNP
rs973213725 425 dbSNP
rs558477376 432 dbSNP
rs1039780787 437 dbSNP
rs1015119606 448 dbSNP
rs1008559260 449 dbSNP
rs915328465 456 dbSNP
rs1156667794 462 dbSNP
rs1390646030 472 dbSNP
rs954549069 480 dbSNP
rs1028672425 481 dbSNP
rs924182575 484 dbSNP
rs982795249 485 dbSNP
rs1440373852 487 dbSNP
rs997485627 489 dbSNP
rs1175398159 490 dbSNP
rs1372847303 499 dbSNP
rs1226858897 500 dbSNP
rs1484160363 507 dbSNP
rs1330168700 513 dbSNP
rs1237989780 517 dbSNP
rs1288300267 519 dbSNP
rs548653065 520 dbSNP
rs1223093858 524 dbSNP
rs113065928 525 dbSNP
rs991180398 526 dbSNP
rs569741552 529 dbSNP
rs958406797 530 dbSNP
rs1240469073 533 dbSNP
rs1016714134 536 dbSNP
rs1163989746 539 dbSNP
rs1352331673 545 dbSNP
rs1411493661 546 dbSNP
rs1304309703 568 dbSNP
rs1324272695 569 dbSNP
rs1046204 570 dbSNP
rs951214685 573 dbSNP
rs1381892170 575 dbSNP
rs1351367692 577 dbSNP
rs1233020025 581 dbSNP
rs371919681 585 dbSNP
rs1052974164 591 dbSNP
rs939355655 593 dbSNP
rs1272929199 594 dbSNP
rs79990374 597 dbSNP
rs1045089372 598 dbSNP
rs1253479315 602 dbSNP
rs1483203268 606 dbSNP
rs947932402 611 dbSNP
rs568481131 612 dbSNP
rs375600225 614 dbSNP
rs973202405 620 dbSNP
rs528578874 625 dbSNP
rs940567046 635 dbSNP
rs1163707816 640 dbSNP
rs566209508 641 dbSNP
rs1427851113 642 dbSNP
rs1371372151 643 dbSNP
rs1425664193 644 dbSNP
rs907597689 647 dbSNP
rs2665987 652 dbSNP
rs1484547674 663 dbSNP
rs1265152824 664 dbSNP
rs954505300 667 dbSNP
rs41282073 668 dbSNP
rs974414529 670 dbSNP
rs964283868 674 dbSNP
rs1276216613 678 dbSNP
rs1485309118 684 dbSNP
rs567493487 684 dbSNP
rs1342417576 688 dbSNP
rs1022595743 691 dbSNP
rs1011063050 692 dbSNP
rs1258591091 693 dbSNP
rs1443873390 693 dbSNP
rs1188028478 694 dbSNP
rs563514997 695 dbSNP
rs1246304467 696 dbSNP
rs1247305057 697 dbSNP
rs1447633960 708 dbSNP
rs1321820218 712 dbSNP
rs547689602 719 dbSNP
rs748603736 720 dbSNP
rs1004011277 724 dbSNP
rs1390934311 728 dbSNP
rs991540811 731 dbSNP
rs1234164630 737 dbSNP
rs1353937962 742 dbSNP
rs1404648201 742 dbSNP
rs1415361827 743 dbSNP
rs1320353395 746 dbSNP
rs779403499 748 dbSNP
rs906618849 750 dbSNP
rs1437975695 751 dbSNP
rs937006576 759 dbSNP
rs1365207292 766 dbSNP
rs909621934 772 dbSNP
rs1346727160 775 dbSNP
rs1400995584 791 dbSNP
rs1200795134 792 dbSNP
rs1267325886 795 dbSNP
rs1463484549 803 dbSNP
rs1210437685 807 dbSNP
rs755266564 808 dbSNP
rs1432615681 811 dbSNP
rs1196884549 815 dbSNP
rs1379556830 816 dbSNP
rs1478508060 818 dbSNP
rs368528492 832 dbSNP
rs1158875810 842 dbSNP
rs1386995610 845 dbSNP
rs1459163945 846 dbSNP
rs1321745275 852 dbSNP
rs78028737 861 dbSNP
rs1287355106 867 dbSNP
rs754194069 868 dbSNP
rs951183698 871 dbSNP
rs552689575 872 dbSNP
rs1025863311 873 dbSNP
rs976615006 883 dbSNP
rs560561955 887 dbSNP
rs1474220867 888 dbSNP
rs1425712794 889 dbSNP
rs1208115867 898 dbSNP
rs773301834 900 dbSNP
rs1194037162 904 dbSNP
rs1452402422 906 dbSNP
rs1427738132 909 dbSNP
rs940514582 915 dbSNP
rs370605871 932 dbSNP
rs965649093 933 dbSNP
rs375992722 935 dbSNP
rs1018203804 936 dbSNP
rs1456889202 941 dbSNP
rs540976272 943 dbSNP
rs754353407 947 dbSNP
rs764107992 948 dbSNP
rs1431958887 951 dbSNP
rs760697366 953 dbSNP
rs775676619 956 dbSNP
rs1424960816 959 dbSNP
rs933031987 967 dbSNP
rs767614712 970 dbSNP
rs759863202 971 dbSNP
rs773141819 972 dbSNP
rs1392174143 974 dbSNP
rs374420142 976 dbSNP
rs73996110 978 dbSNP
rs776733186 979 dbSNP
rs1337167897 986 dbSNP
rs768174525 987 dbSNP
rs1245409437 989 dbSNP
rs750692713 991 dbSNP
rs1323369023 996 dbSNP
rs746472319 1008 dbSNP
rs143262818 1009 dbSNP
rs1267152345 1016 dbSNP
rs757981459 1020 dbSNP
rs1205592320 1021 dbSNP
rs1204557244 1027 dbSNP
rs745524081 1027 dbSNP
rs1484184578 1028 dbSNP
rs779186841 1030 dbSNP
rs757637109 1032 dbSNP
rs150538160 1033 dbSNP
rs1458740774 1034 dbSNP
rs902606140 1038 dbSNP
rs764550229 1039 dbSNP
rs1163431309 1041 dbSNP
rs558659991 1042 dbSNP
rs752708237 1043 dbSNP
rs1184607194 1044 dbSNP
rs767707842 1049 dbSNP
rs759614587 1050 dbSNP
rs1046962503 1053 dbSNP
rs751845530 1055 dbSNP
rs765075896 1056 dbSNP
rs376309530 1058 dbSNP
rs544761799 1059 dbSNP
rs768463312 1061 dbSNP
rs1378090801 1063 dbSNP
rs1199088459 1064 dbSNP
rs760730740 1067 dbSNP
rs1236273719 1069 dbSNP
rs1334740282 1075 dbSNP
rs1323845843 1079 dbSNP
rs767449079 1084 dbSNP
rs771623955 1085 dbSNP
rs745471642 1093 dbSNP
rs778564601 1094 dbSNP
rs770607045 1095 dbSNP
rs749628278 1096 dbSNP
rs1468669295 1097 dbSNP
rs1363396159 1098 dbSNP
rs1383483773 1104 dbSNP
rs1227727127 1107 dbSNP
rs749433654 1112 dbSNP
rs1199875943 1116 dbSNP
rs141605445 1117 dbSNP
rs756578267 1118 dbSNP
rs1212982084 1119 dbSNP
rs781078929 1120 dbSNP
rs755108612 1124 dbSNP
rs751792417 1131 dbSNP
rs762000066 1132 dbSNP
rs763317623 1140 dbSNP
rs1235011988 1144 dbSNP
rs1373641117 1146 dbSNP
rs753679174 1147 dbSNP
rs1257440244 1159 dbSNP
rs763953146 1163 dbSNP
rs771439466 1164 dbSNP
rs1266169029 1165 dbSNP
rs759012463 1166 dbSNP
rs144821937 1172 dbSNP
rs749010550 1173 dbSNP
rs1173340996 1174 dbSNP
rs1479163865 1176 dbSNP
rs1393520697 1179 dbSNP
rs752250507 1180 dbSNP
rs777937230 1181 dbSNP
rs770213258 1184 dbSNP
rs748555223 1186 dbSNP
rs781738913 1189 dbSNP
rs751669820 1190 dbSNP
rs373025810 1191 dbSNP
rs1434363748 1192 dbSNP
rs758626371 1199 dbSNP
rs767300626 1199 dbSNP
rs1295314553 1200 dbSNP
rs1345222335 1201 dbSNP
rs750670426 1203 dbSNP
rs763747350 1204 dbSNP
rs1366402031 1205 dbSNP
rs755964296 1208 dbSNP
rs752471164 1210 dbSNP
rs1012183781 1218 dbSNP
rs201527483 1222 dbSNP
rs1310705947 1223 dbSNP
rs1334854146 1230 dbSNP
rs759525329 1236 dbSNP
rs1339131239 1238 dbSNP
rs1048097772 1241 dbSNP
rs536559451 1242 dbSNP
rs1037685809 1243 dbSNP
rs918360426 1248 dbSNP
rs567519032 1249 dbSNP
rs1004718374 1250 dbSNP
rs553777311 1255 dbSNP
rs911116841 1256 dbSNP
rs985378197 1260 dbSNP
rs1302993740 1263 dbSNP
rs1052026027 1266 dbSNP
rs1438743634 1268 dbSNP
rs1379273683 1272 dbSNP
rs535056333 1276 dbSNP
rs527940357 1277 dbSNP
rs1390785805 1279 dbSNP
rs1293065076 1280 dbSNP
rs763840939 1280 dbSNP
rs933209401 1281 dbSNP
rs921660477 1282 dbSNP
rs372861979 1283 dbSNP
rs1284170528 1290 dbSNP
rs1328844743 1299 dbSNP
rs1226968452 1316 dbSNP
rs999488974 1317 dbSNP
rs967167493 1323 dbSNP
rs1215859187 1327 dbSNP
rs759605458 1335 dbSNP
rs1487219664 1353 dbSNP
rs947134528 1358 dbSNP
rs1343045459 1359 dbSNP
rs1472118112 1360 dbSNP
rs1174043397 1364 dbSNP
rs776268196 1370 dbSNP
rs565917203 1374 dbSNP
rs914216027 1375 dbSNP
rs1401273931 1376 dbSNP
rs1006440770 1377 dbSNP
rs888038576 1383 dbSNP
rs1394049783 1385 dbSNP
rs1048063528 1387 dbSNP
rs929676844 1391 dbSNP
rs185386695 1394 dbSNP
rs988475921 1413 dbSNP
rs532474792 1414 dbSNP
rs1238326688 1427 dbSNP
rs924248715 1428 dbSNP
rs1183144982 1435 dbSNP
rs1437702372 1438 dbSNP
rs867812698 1445 dbSNP
rs1352018421 1446 dbSNP
rs73996109 1448 dbSNP
rs1288360449 1452 dbSNP
rs1202509197 1455 dbSNP
rs746601101 1461 dbSNP
rs1040829803 1464 dbSNP
rs943861453 1466 dbSNP
rs1023661908 1478 dbSNP
rs549923425 1479 dbSNP
rs772938472 1511 dbSNP
rs963434082 1512 dbSNP
rs1280273929 1523 dbSNP
rs1470392946 1524 dbSNP
rs771423021 1527 dbSNP
rs182485939 1529 dbSNP
rs911096339 1533 dbSNP
rs985262269 1534 dbSNP
rs35212690 1537 dbSNP
rs1336115712 1544 dbSNP
rs1004920342 1545 dbSNP
rs886353317 1550 dbSNP
rs1257841244 1551 dbSNP
rs957914124 1555 dbSNP
rs773849258 1559 dbSNP
rs1310239393 1560 dbSNP
rs765880914 1563 dbSNP
rs762538689 1566 dbSNP
rs772944558 1567 dbSNP
rs770014240 1569 dbSNP
rs1475075963 1571 dbSNP
rs561295093 1580 dbSNP
rs1188940172 1581 dbSNP
rs369109233 1582 dbSNP
rs769275133 1584 dbSNP
rs1205486310 1586 dbSNP
rs1343275297 1588 dbSNP
rs1275628767 1590 dbSNP
rs1213198472 1591 dbSNP
rs1339229566 1594 dbSNP
rs1285337867 1596 dbSNP
rs1341011879 1597 dbSNP
rs1416649256 1599 dbSNP
rs747521334 1610 dbSNP
rs1312469283 1615 dbSNP
rs140797843 1616 dbSNP
rs1356049965 1620 dbSNP
rs1167986048 1621 dbSNP
rs1409159567 1624 dbSNP
rs758573179 1626 dbSNP
rs143351795 1627 dbSNP
rs1473924927 1630 dbSNP
rs755460772 1634 dbSNP
rs752520798 1635 dbSNP
rs1446425130 1636 dbSNP
rs767369674 1637 dbSNP
rs1230829163 1638 dbSNP
rs754846592 1640 dbSNP
rs1437638243 1641 dbSNP
rs751514593 1642 dbSNP
rs754796478 1645 dbSNP
rs765831021 1645 dbSNP
rs751438415 1646 dbSNP
rs1465041029 1647 dbSNP
rs772638346 1648 dbSNP
rs749838124 1649 dbSNP
rs757934380 1653 dbSNP
rs1292810936 1654 dbSNP
rs1229101250 1657 dbSNP
rs1375716175 1658 dbSNP
rs1296696866 1664 dbSNP
rs761431638 1665 dbSNP
rs564705824 1666 dbSNP
rs139224066 1669 dbSNP
rs776172135 1670 dbSNP
rs1416503712 1671 dbSNP
rs772741101 1673 dbSNP
rs1225574129 1675 dbSNP
rs766411667 1675 dbSNP
rs1420391847 1676 dbSNP
rs745934049 1679 dbSNP
rs112045875 1681 dbSNP
rs1199644403 1687 dbSNP
rs545103310 1688 dbSNP
rs749479934 1689 dbSNP
rs371765385 1690 dbSNP
rs1467483010 1700 dbSNP
rs1441143032 1702 dbSNP
rs754793577 1702 dbSNP
rs1236805376 1705 dbSNP
rs111935487 1709 dbSNP
rs1273111828 1710 dbSNP
rs1209393823 1712 dbSNP
rs751463301 1713 dbSNP
rs1305103039 1714 dbSNP
rs1178344230 1721 dbSNP
rs762853986 1721 dbSNP
rs1223467091 1724 dbSNP
rs576164907 1727 dbSNP
rs1305422055 1728 dbSNP
rs1438454557 1737 dbSNP
rs1447686756 1739 dbSNP
rs758317028 1741 dbSNP
rs142424750 1743 dbSNP
rs764722869 1747 dbSNP
rs1443515315 1748 dbSNP
rs1258817536 1750 dbSNP
rs1171192544 1753 dbSNP
rs1454876052 1755 dbSNP
rs367895945 1756 dbSNP
rs753565753 1759 dbSNP
rs773210527 1763 dbSNP
rs1396522248 1767 dbSNP
rs761090443 1768 dbSNP
rs765160550 1770 dbSNP
rs776041658 1771 dbSNP
rs772689861 1772 dbSNP
rs1380057624 1774 dbSNP
rs1319660553 1775 dbSNP
rs761978685 1775 dbSNP
rs1486870084 1776 dbSNP
rs374914758 1777 dbSNP
rs371410673 1780 dbSNP
rs770932504 1781 dbSNP
rs1282779081 1783 dbSNP
rs1325488001 1787 dbSNP
rs1231745207 1789 dbSNP
rs749481557 1794 dbSNP
rs770044149 1795 dbSNP
rs746784791 1801 dbSNP
rs1049520943 1817 dbSNP
rs1206990060 1821 dbSNP
rs1317231787 1826 dbSNP
rs750555414 1828 dbSNP
rs925182032 1829 dbSNP
rs1271291751 1835 dbSNP
rs1480991157 1836 dbSNP
rs1158836165 1837 dbSNP
rs1359239305 1842 dbSNP
rs1410427161 1845 dbSNP
rs978006409 1847 dbSNP
rs779883597 1848 dbSNP
rs367697538 1851 dbSNP
rs374625380 1852 dbSNP
rs1385716530 1861 dbSNP
rs776816026 1861 dbSNP
rs1394895787 1862 dbSNP
rs1171724313 1864 dbSNP
rs371392278 1865 dbSNP
rs756747853 1866 dbSNP
rs1185933265 1869 dbSNP
rs753438847 1878 dbSNP
rs763816558 1882 dbSNP
rs1209050744 1883 dbSNP
rs1346881797 1886 dbSNP
rs917888756 1892 dbSNP
rs760460725 1898 dbSNP
rs138188092 1899 dbSNP
rs760032798 1902 dbSNP
rs768909709 1904 dbSNP
rs200746630 1907 dbSNP
rs774744376 1909 dbSNP
rs369781147 1911 dbSNP
rs762989852 1912 dbSNP
rs747851718 1915 dbSNP
rs200322374 1916 dbSNP
rs747372789 1919 dbSNP
rs769993386 1924 dbSNP
rs368377504 1926 dbSNP
rs993804837 1931 dbSNP
rs1043149 1932 dbSNP
rs554067922 1942 dbSNP
rs148006416 1948 dbSNP
rs1420200855 1950 dbSNP
rs1008320331 1951 dbSNP
rs1186061021 1952 dbSNP
rs375080677 1953 dbSNP
rs572424047 1954 dbSNP
rs777491976 1957 dbSNP
rs1479548159 1958 dbSNP
rs755760169 1959 dbSNP
rs1233866181 1962 dbSNP
rs201270879 1964 dbSNP
rs936493138 1965 dbSNP
rs367846071 1968 dbSNP
rs767876132 1970 dbSNP
rs755330617 1971 dbSNP
rs1393483489 1972 dbSNP
rs1042618822 1981 dbSNP
rs370560425 1983 dbSNP
rs1204788128 1986 dbSNP
rs151256408 1987 dbSNP
rs775892580 1990 dbSNP
rs201259366 1991 dbSNP
rs144136649 1992 dbSNP
rs773278559 1993 dbSNP
rs529551177 1995 dbSNP
rs759515590 1996 dbSNP
rs1184307264 1997 dbSNP
rs377587633 2001 dbSNP
rs776661652 2003 dbSNP
rs140454061 2004 dbSNP
rs774260105 2007 dbSNP
rs1352370687 2009 dbSNP
rs938018007 2012 dbSNP
rs770768941 2016 dbSNP
rs749241026 2017 dbSNP
rs777359611 2018 dbSNP
rs755709345 2020 dbSNP
rs1450273752 2021 dbSNP
rs146722649 2022 dbSNP
rs569770443 2023 dbSNP
rs746294699 2023 dbSNP
rs772500102 2023 dbSNP
rs964614160 2027 dbSNP
rs566441531 2028 dbSNP
rs1206189216 2029 dbSNP
rs766837277 2029 dbSNP
rs893003360 2034 dbSNP
rs758838729 2035 dbSNP
rs1324498017 2037 dbSNP
rs1460965154 2038 dbSNP
rs750943745 2041 dbSNP
rs1242604122 2042 dbSNP
rs143779733 2046 dbSNP
rs1187341850 2049 dbSNP
rs1451970742 2051 dbSNP
rs761847302 2053 dbSNP
rs776817661 2059 dbSNP
rs1429865588 2064 dbSNP
rs1455443918 2065 dbSNP
rs370429794 2067 dbSNP
rs143332874 2068 dbSNP
rs773950337 2072 dbSNP
rs1338672573 2075 dbSNP
rs770861935 2080 dbSNP
rs762932459 2083 dbSNP
rs202074550 2084 dbSNP
rs1000607854 2085 dbSNP
rs148665598 2086 dbSNP
rs140656208 2087 dbSNP
rs779504228 2087 dbSNP
rs747590255 2088 dbSNP
rs780817546 2090 dbSNP
rs146836718 2092 dbSNP
rs373431850 2093 dbSNP
rs1320299818 2096 dbSNP
rs780227901 2097 dbSNP
rs758791520 2099 dbSNP
rs1225701716 2102 dbSNP
rs1195971828 2103 dbSNP
rs750823224 2107 dbSNP
rs1436323690 2110 dbSNP
rs1393116888 2111 dbSNP
rs201124965 2112 dbSNP
rs1475670024 2114 dbSNP
rs757815055 2116 dbSNP
rs1190347763 2117 dbSNP
rs1445940915 2121 dbSNP
rs1239794562 2125 dbSNP
rs1055335286 2126 dbSNP
rs564905386 2131 dbSNP
rs764238220 2132 dbSNP
rs1350497112 2133 dbSNP
rs373637080 2134 dbSNP
rs762812199 2135 dbSNP
rs143922990 2136 dbSNP
rs771704797 2137 dbSNP
rs746595295 2140 dbSNP
rs779646744 2141 dbSNP
rs747707246 2142 dbSNP
rs755529553 2142 dbSNP
rs976104701 2143 dbSNP
rs1416921999 2144 dbSNP
rs1373887778 2147 dbSNP
rs771757847 2148 dbSNP
rs964729027 2156 dbSNP
rs910457903 2157 dbSNP
rs1049094481 2158 dbSNP
rs1174555152 2159 dbSNP
rs531328918 2161 dbSNP
rs930680424 2162 dbSNP
rs919347518 2164 dbSNP
rs972233197 2166 dbSNP
rs1269422927 2175 dbSNP
rs189863330 2179 dbSNP
rs1178865537 2182 dbSNP
rs376126613 2183 dbSNP
rs1175462208 2184 dbSNP
rs562611925 2185 dbSNP
rs1410033984 2186 dbSNP
rs912131844 2187 dbSNP
rs542726890 2189 dbSNP
rs1164114137 2192 dbSNP
rs1220361461 2194 dbSNP
rs746214535 2195 dbSNP
rs1421510662 2196 dbSNP
rs1166139331 2200 dbSNP
rs1426712716 2201 dbSNP
rs201163620 2202 dbSNP
rs372981369 2203 dbSNP
rs373727958 2207 dbSNP
rs1027914331 2208 dbSNP
rs369528499 2210 dbSNP
rs780959820 2210 dbSNP
rs1313657974 2216 dbSNP
rs1356642712 2220 dbSNP
rs201573073 2222 dbSNP
rs577823187 2223 dbSNP
rs371601457 2224 dbSNP
rs1209802979 2225 dbSNP
rs1202134200 2227 dbSNP
rs767826167 2229 dbSNP
rs759896218 2230 dbSNP
rs1213401698 2231 dbSNP
rs8836 2232 dbSNP
rs754741502 2233 dbSNP
rs894118946 2233 dbSNP
rs776655580 2234 dbSNP
rs763976488 2235 dbSNP
rs199930768 2236 dbSNP
rs1056381794 2237 dbSNP
rs1006390876 2238 dbSNP
rs1442636795 2241 dbSNP
rs775035609 2244 dbSNP
rs141382007 2245 dbSNP
rs145200784 2246 dbSNP
rs200623073 2247 dbSNP
rs201632789 2249 dbSNP
rs778314165 2250 dbSNP
rs1338288097 2251 dbSNP
rs374650693 2252 dbSNP
rs147360559 2268 dbSNP
rs781489327 2278 dbSNP
rs1470698057 2279 dbSNP
rs749977473 2281 dbSNP
rs755188097 2285 dbSNP
rs1202884783 2286 dbSNP
rs751849469 2291 dbSNP
rs143316623 2308 dbSNP
rs377168006 2309 dbSNP
rs1467902584 2311 dbSNP
rs753622257 2314 dbSNP
rs760591933 2315 dbSNP
rs1224611030 2316 dbSNP
rs751384943 2317 dbSNP
rs774910913 2317 dbSNP
rs767026497 2318 dbSNP
rs1375239354 2323 dbSNP
rs759139193 2324 dbSNP
rs774020675 2326 dbSNP
rs770527890 2327 dbSNP
rs1408890445 2329 dbSNP
rs749643638 2330 dbSNP
rs766215353 2330 dbSNP
rs773508955 2331 dbSNP
rs139395139 2332 dbSNP
rs1315911704 2333 dbSNP
rs781468254 2335 dbSNP
rs757531566 2336 dbSNP
rs552093015 2339 dbSNP
rs971667291 2344 dbSNP
rs747196753 2345 dbSNP
rs1222638876 2348 dbSNP
rs758213401 2350 dbSNP
rs1261209721 2354 dbSNP
rs1439495198 2356 dbSNP
rs780298385 2357 dbSNP
rs199644477 2358 dbSNP
rs1024157318 2360 dbSNP
rs1219252548 2361 dbSNP
rs372373592 2365 dbSNP
rs750282140 2366 dbSNP
rs765271798 2367 dbSNP
rs755903885 2369 dbSNP
rs1216604653 2370 dbSNP
rs1318888791 2371 dbSNP
rs1282459845 2376 dbSNP
rs1239095444 2377 dbSNP
rs368734285 2378 dbSNP
rs755988011 2386 dbSNP
rs752653913 2391 dbSNP
rs766973041 2392 dbSNP
rs1272758693 2399 dbSNP
rs759014464 2400 dbSNP
rs1470552144 2404 dbSNP
rs374504468 2406 dbSNP
rs531365602 2410 dbSNP
rs762579774 2412 dbSNP
rs773560354 2414 dbSNP
rs12103859 2417 dbSNP
rs879001067 2422 dbSNP
rs562443591 2427 dbSNP
rs113914389 2428 dbSNP
rs1398431823 2430 dbSNP
rs1319925379 2434 dbSNP
rs1035233277 2440 dbSNP
rs778258389 2448 dbSNP
rs1324867157 2451 dbSNP
rs1326608832 2452 dbSNP
rs1002050683 2453 dbSNP
rs905087212 2454 dbSNP
rs1016523167 2456 dbSNP
rs1005207890 2457 dbSNP
rs1224111662 2458 dbSNP
rs113423076 2459 dbSNP
rs191578696 2468 dbSNP
rs548954588 2469 dbSNP
rs1285247656 2478 dbSNP
rs1294229308 2481 dbSNP
rs993665944 2483 dbSNP
rs372011610 2488 dbSNP
rs1414556980 2489 dbSNP
rs1271590595 2490 dbSNP
rs1373826534 2505 dbSNP
rs758571383 2506 dbSNP
rs1290903075 2511 dbSNP
rs1040582463 2514 dbSNP
rs1451032604 2517 dbSNP
rs1159741794 2536 dbSNP
rs944747038 2541 dbSNP
rs1423532237 2545 dbSNP
rs1300896287 2548 dbSNP
rs1367272835 2556 dbSNP
rs890560031 2573 dbSNP
rs1306244355 2585 dbSNP
rs753659917 2585 dbSNP
rs370977221 2588 dbSNP
rs1280145312 2591 dbSNP
rs766342441 2600 dbSNP
rs558028868 2602 dbSNP
rs1294190675 2621 dbSNP
rs1054458132 2626 dbSNP
rs936024449 2627 dbSNP
rs1249058828 2630 dbSNP
rs1421333826 2632 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084065. RNA binding protein: AGO2. Condition:CLIP_emetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM4903833
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_a
Location of target site NM_001013839 | 3UTR | AGAAGGAAGACAGAGGCCUGUGCCCACUGCUGCUCCAUGUGUACCAAGAGCAGCAGGGCAGAAGGGCCCUCCCUCCAGCCUAGGUCAGAGGUGGGGACAGAGAACUCCCCUACAGCCCAGAGAU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903837
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_b
Location of target site NM_001013839 | 3UTR | AAGAGAGAAGGAAGACAGAGGCCUGUGCCCACUGCUGCUCCAUGUGUACCAAGAGCAGCAGGGCAGAAGGGCCCUCCCUCCAGCCUAGGUCAGAGGUGGGGACAGAGAACUCCCCUACAGCCCAGAGAU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM1084065
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_emetine_AbnovaAb
Location of target site ENST00000607838.1 | 3UTR | AAAAGAGAGAAGGAAGAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
134 hsa-miR-3120-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT096972 BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB 2 2
MIRT442624 LOX lysyl oxidase 2 2
MIRT473438 MDM4 MDM4, p53 regulator 2 2
MIRT490011 KIFC2 kinesin family member C2 2 2
MIRT496449 N6AMT1 N-6 adenine-specific DNA methyltransferase 1 2 2
MIRT496752 TGIF2 TGFB induced factor homeobox 2 2 2
MIRT497721 CYP1A1 cytochrome P450 family 1 subfamily A member 1 2 2
MIRT498287 PADI3 peptidyl arginine deiminase 3 2 2
MIRT503195 ACVR1B activin A receptor type 1B 2 4
MIRT504760 TEP1 telomerase associated protein 1 2 4
MIRT517810 UGDH UDP-glucose 6-dehydrogenase 2 6
MIRT519686 ZNF622 zinc finger protein 622 2 4
MIRT520263 URGCP upregulator of cell proliferation 2 2
MIRT523051 ICMT isoprenylcysteine carboxyl methyltransferase 2 2
MIRT525601 OLR1 oxidized low density lipoprotein receptor 1 2 4
MIRT526995 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT528699 TRAF3IP2 TRAF3 interacting protein 2 2 4
MIRT533142 WNT10A Wnt family member 10A 2 2
MIRT537618 ERI1 exoribonuclease 1 2 2
MIRT539707 EIF3H eukaryotic translation initiation factor 3 subunit H 2 2
MIRT539752 CNBP CCHC-type zinc finger nucleic acid binding protein 2 2
MIRT539808 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT539941 IFNAR2 interferon alpha and beta receptor subunit 2 2 2
MIRT540424 FAM83F family with sequence similarity 83 member F 2 2
MIRT540509 CXCL10 C-X-C motif chemokine ligand 10 2 2
MIRT540720 GUF1 GUF1 homolog, GTPase 2 2
MIRT541630 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT542286 POLR3K RNA polymerase III subunit K 2 2
MIRT542456 AKR7A2 aldo-keto reductase family 7 member A2 2 2
MIRT542550 MRPS10 mitochondrial ribosomal protein S10 2 2
MIRT542771 PPAP2B phospholipid phosphatase 3 2 2
MIRT550085 TRAPPC2 trafficking protein particle complex 2 2 2
MIRT551458 CARKD NAD(P)HX dehydratase 2 2
MIRT555622 PHLPP2 PH domain and leucine rich repeat protein phosphatase 2 2 2
MIRT569136 KATNAL1 katanin catalytic subunit A1 like 1 2 2
MIRT572328 HSPB6 heat shock protein family B (small) member 6 2 2
MIRT574607 LZIC leucine zipper and CTNNBIP1 domain containing 2 2
MIRT575583 Mcm8 minichromosome maintenance 8 homologous recombination repair factor 2 4
MIRT576125 Hrk harakiri, BCL2 interacting protein (contains only BH3 domain) 2 5
MIRT576657 Fam216a family with sequence similarity 216, member A 2 2
MIRT607222 ACSM2A acyl-CoA synthetase medium chain family member 2A 2 4
MIRT607292 CD300E CD300e molecule 2 6
MIRT607746 ANGPT4 angiopoietin 4 2 2
MIRT607905 SPRYD4 SPRY domain containing 4 2 2
MIRT608159 HRK harakiri, BCL2 interacting protein 2 7
MIRT608657 ABCF3 ATP binding cassette subfamily F member 3 2 4
MIRT609115 ZNF703 zinc finger protein 703 2 6
MIRT610231 ACOT9 acyl-CoA thioesterase 9 2 2
MIRT610870 NUDCD3 NudC domain containing 3 2 2
MIRT611217 MC2R melanocortin 2 receptor 2 2
MIRT614858 PLEKHA6 pleckstrin homology domain containing A6 2 2
MIRT616966 LMX1A LIM homeobox transcription factor 1 alpha 2 2
MIRT617258 GLIPR1L2 GLI pathogenesis related 1 like 2 2 2
MIRT618009 SLC9A3R2 SLC9A3 regulator 2 2 2
MIRT619067 BSND barttin CLCNK type accessory beta subunit 2 4
MIRT619295 FAM26E calcium homeostasis modulator family member 5 2 2
MIRT619348 GINM1 glycoprotein integral membrane 1 2 2
MIRT619362 CFHR5 complement factor H related 5 2 2
MIRT619541 PIWIL2 piwi like RNA-mediated gene silencing 2 2 2
MIRT619782 NRIP2 nuclear receptor interacting protein 2 2 2
MIRT619994 NPAP1 nuclear pore associated protein 1 2 2
MIRT621030 CDC14B cell division cycle 14B 2 2
MIRT622033 STAT5A signal transducer and activator of transcription 5A 2 2
MIRT622728 PITPNM3 PITPNM family member 3 2 2
MIRT623144 NAV2 neuron navigator 2 2 2
MIRT623600 IPO9 importin 9 2 2
MIRT624608 B3GALT5 beta-1,3-galactosyltransferase 5 2 2
MIRT624905 CTCFL CCCTC-binding factor like 2 2
MIRT625030 SPC24 SPC24, NDC80 kinetochore complex component 2 2
MIRT625688 MCM8 minichromosome maintenance 8 homologous recombination repair factor 2 5
MIRT626531 EMCN endomucin 2 2
MIRT627204 ZDHHC20 zinc finger DHHC-type containing 20 2 2
MIRT628033 LSAMP limbic system-associated membrane protein 2 2
MIRT628203 FREM2 FRAS1 related extracellular matrix protein 2 2 2
MIRT631012 LINS lines homolog 1 2 2
MIRT633195 HSPE1-MOB4 HSPE1-MOB4 readthrough 2 2
MIRT633890 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT634023 MOB4 MOB family member 4, phocein 2 2
MIRT634416 PLCXD3 phosphatidylinositol specific phospholipase C X domain containing 3 2 2
MIRT636866 ARSE arylsulfatase E (chondrodysplasia punctata 1) 2 2
MIRT642527 ANKRD9 ankyrin repeat domain 9 2 2
MIRT645408 FAM110A family with sequence similarity 110 member A 2 2
MIRT645635 SYTL4 synaptotagmin like 4 2 2
MIRT646013 TNFAIP8L2 TNF alpha induced protein 8 like 2 2 2
MIRT646686 ASGR2 asialoglycoprotein receptor 2 2 2
MIRT652838 TACO1 translational activator of cytochrome c oxidase I 2 2
MIRT655156 PHF21B PHD finger protein 21B 2 2
MIRT658491 EXOC7 exocyst complex component 7 2 2
MIRT659398 CORO2A coronin 2A 2 2
MIRT666825 PRCP prolylcarboxypeptidase 2 2
MIRT666866 POU2F2 POU class 2 homeobox 2 2 2
MIRT668224 GABRA1 gamma-aminobutyric acid type A receptor alpha1 subunit 2 2
MIRT673288 PDE3A phosphodiesterase 3A 2 2
MIRT673878 KLF2 Kruppel like factor 2 2 2
MIRT681721 KCNE4 potassium voltage-gated channel subfamily E regulatory subunit 4 2 2
MIRT682406 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT684109 MCM10 minichromosome maintenance 10 replication initiation factor 2 2
MIRT684423 TUFT1 tuftelin 1 2 2
MIRT684684 OR7D2 olfactory receptor family 7 subfamily D member 2 2 2
MIRT686638 TMEM184C transmembrane protein 184C 2 2
MIRT689457 NXN nucleoredoxin 2 2
MIRT689627 NAA30 N(alpha)-acetyltransferase 30, NatC catalytic subunit 2 2
MIRT690773 PLA2G2C phospholipase A2 group IIC 2 2
MIRT690822 SGSM2 small G protein signaling modulator 2 2 2
MIRT693669 MXRA7 matrix remodeling associated 7 2 2
MIRT695553 CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 2 2
MIRT695872 C19orf52 translocase of inner mitochondrial membrane 29 2 2
MIRT698160 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT699933 RUFY2 RUN and FYVE domain containing 2 2 2
MIRT708639 UBE2W ubiquitin conjugating enzyme E2 W 2 2
MIRT710816 RAB11FIP4 RAB11 family interacting protein 4 2 2
MIRT711242 TRAT1 T-cell receptor associated transmembrane adaptor 1 2 2
MIRT711542 MSH3 mutS homolog 3 2 2
MIRT711749 DTX1 deltex E3 ubiquitin ligase 1 2 2
MIRT712303 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT712922 RPF2 ribosome production factor 2 homolog 2 2
MIRT714027 SYDE2 synapse defective Rho GTPase homolog 2 2 2
MIRT714768 TERF1 telomeric repeat binding factor 1 2 2
MIRT714844 ADAMTS17 ADAM metallopeptidase with thrombospondin type 1 motif 17 2 2
MIRT715223 NPVF neuropeptide VF precursor 2 2
MIRT716110 GMPS guanine monophosphate synthase 2 2
MIRT716174 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT716383 C6orf223 chromosome 6 open reading frame 223 2 2
MIRT716527 KSR2 kinase suppressor of ras 2 2 2
MIRT716962 P2RY6 pyrimidinergic receptor P2Y6 2 2
MIRT717605 DSTYK dual serine/threonine and tyrosine protein kinase 2 2
MIRT717696 PTGS1 prostaglandin-endoperoxide synthase 1 2 2
MIRT721360 ENTHD1 ENTH domain containing 1 2 2
MIRT721381 MACC1 MACC1, MET transcriptional regulator 2 2
MIRT721935 RASSF2 Ras association domain family member 2 2 2
MIRT722094 SUSD1 sushi domain containing 1 2 2
MIRT722837 C17orf102 chromosome 17 open reading frame 102 2 2
MIRT722990 TOR1A torsin family 1 member A 2 2
MIRT724174 ABCF2 ATP binding cassette subfamily F member 2 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-3120-5p Cisplatin 5460033 NSC119875 approved sensitive cell line
hsa-miR-3120-5p Prednisone/Azathioprine/Methotrexate/Cyclophosphamide/Mycophenolate mofetil sensitive tissue (myasthenia gravis)
hsa-miR-3120-5p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)

Error report submission