miRTarBase - #MIRT658919


—
pre-miRNA Information
pre-miRNA hsa-mir-4707   
Genomic Coordinates chr14: 22956950 - 22957029
Description Homo sapiens miR-4707 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4707-3p
Sequence 52| AGCCCGCCCCAGCCGAGGUUCU |73
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1180125593 2 dbSNP
rs1390998288 5 dbSNP
rs2273626 6 dbSNP
rs765507627 7 dbSNP
rs1299611135 9 dbSNP
rs1158707105 11 dbSNP
rs535691977 15 dbSNP
rs952013388 17 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol DPY19L4   
Synonyms -
Description dpy-19 like 4
Transcript NM_181787   
Expression
Putative miRNA Targets on DPY19L4
3'UTR of DPY19L4
(miRNA target sites are highlighted)		 
>DPY19L4|NM_181787|3'UTR
   1 AAAATAACAGAGCCTTCATTTCAAAGACTACCTGAAGTAAAATGCAGTTTTCTTCTACCTACTCGGTGTCTTTTGCAGAT
  81 CAGAGTATGGACATTTGAAATATTGCTGCTTCTTTCCCCCTTCTGCTGTTAACTGGATCCAGAGTTCTGTGGGAAATAGA
 161 AGATCAAGCATTACTGTCCTTTGATTAAATGTGATATCTACCACTCTGCAATATTCCAGACAGGTGTCTTCCTTACCGTT
 241 ACATGGTCTTTAACACTTTTACTGATTGCAATATTTTCCCCATAAAATCTTCATTCTATTATAATATTGATCTTGAATTT
 321 GAATATGTGCAAGGTCAGATACATTTCTCAAACATAACATTTAATAAATAATGTGATATAATTATTTAATAGAAAGAATA
 401 ATTCCGACCTTCAAGCAAGTTTCTGAAGGTATTTTATGATGTATAACAACTGAAGTTTTACAATAAAAACTAATTTAAAT
 481 GTTAGCTGAAGATATGTGGCATTTAAATTAAAATGGAAATTATATAAAGGAAAGTGATTTTTAAGGATATACATAAAGAT
 561 ATATTTAGAATTTTCATGATACTGTTCTCCTCATCTACTGCTTATGTTAAGTGAGAACTTTCTTAGTAATACATAATGCA
 641 TGATGTTACTGCATTTTCTAAATGACTAGTAAGTGATTAGTTTTTTCACTTATGCCTATTAATTTGATACCAATTTAATC
 721 ATGATAAAACAATAACCGTTAACATATATTTTGTTAAATGGACATTTAAAAGAATGTTGTTCAGGTTTTTTTTTTAAATA
 801 CTGATATGGGGCATACAATCTATTCACATGTTTTCTACTGAAGTACTAAGTAAAAAAATTAAATCATTATCAGAATAAAA
 881 ATATGTGTTCTAAAATTAGCAACAATTTCTGGGGATACATGCAGATGTTGTTAAACGTACCTCTGCATACAGATATATTA
 961 TAAAACACAAGCAATGTTATTTATGAAACTGTGATGCAGTCTTCAACATCAAGAAAAAATGACAACTATAATAAAATTTA
1041 CAACACAGTTTCACAGTCTAAATGCTATGTTCCTTTAAGTATTTTCATATTTTTAATCATTTATTAAGAGAAAATTGTGA
1121 AAAGTTAATTTGGCCTTATAGAGAGATTCAGGATAGATGTAGCCTATAGATGTGTCATTTTAATAAGTTGGGATACATGT
1201 TTAGTTTTTCCTTATATTCCTGTTCAGTGAACAGATTTTCATAATTCTCACTTGTTAAAGTGCTGCAAAAATTGCATTTT
1281 CAGTACTCTAAATTACTACATTAGAAGAGAGCATTTCTCCATTGTCTTTATTTTCTGTTATATATGTGTTGTAAAAGTAC
1361 ACTACATTAGAAGGGAGCTTTTCCGTTGTCTTTATTTTCTGTTATACATGTGTTGTTAAAGTACATGCATTCTTAGACTA
1441 ACTCTCAGATGCTTTGCTCTTTTGGAGCTGAAGAATTGTTTGATGGTGATGTCATATATCTGATAGATTAGTTTCAGTGG
1521 TTCTCATTTCACTTTTATACGTAATTTCTTAACTATATTAAGATAGTTGCAGGCAGTGTACCTCAGGTTGACTCTGTACA
1601 TCTGAATAGTGAGTCACTAGTATTTTGCTTCAAGCCTTCTGAAAATATAACCATAGTTACCTAAGCACACAGTGAATAGT
1681 CACATGGTAGTACTTGTGATTAGAGCATGTAAAACAATGTAATTGAAAAGTCAGCTTCCATATTTTGTAGGGGAAATAGA
1761 ACACCCTACTTTTTATCTAGTGTGAAATATTTAATCGAATTTTTGTTGATTTATATTATGTTACCTGTGCTGAATTAGGT
1841 TTGGTACTTGTGTTTTGTTTGACATATTAGTAAGTTGCTTTTGCTTCTTTCTGTCAACTTATTTTTTAAATAAAATTGAT
1921 CTGGAAAAATTGTTAATGGGATGTTTTAAATAATGAATTTTTCATCCAGCATCAGTTGAAAAGGAAAAGAAAGCTTCATT
2001 ATGGAAATGACAATATTGAATATGACAGATAAGTTTATTTGCTTCTGTTTTAACTGCAGTTAATAGTACTAGACAACTTT
2081 AAGTGGAAAGCATTTAGTTTATTTCTTCACTTATTTGTAGAGTGAACAAATGATTCACAATTCTACAAGTAATTCCACTT
2161 AGGTAACTTACAGTTGTTAGGTTTGACAATAAAGATCTACTATGAGAGGAGAAGAATTTATGGGTTTTGGGTGGAAGGAA
2241 TTTCTCAAAGAAATAAAAAATGTTCTTTGCCCTTGATACTGCAAACCCACTGATACAAGTGCCTTGAATTTATTATTATT
2321 ATTATTTTTTATTTTTTTGAGATGGAGTTTCACTCTTGTCTCCCAGGCTGGAGTGCAATGGCGCGATCTTGGCTCACTGC
2401 AACCTCCGCTCGCTGCAACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCGGAGTAGCTGGGATTACAG
2481 GCACCTGCCACCAAGCACGGCTAATTTTTGTATTTTTAGTAGAAACGGGGTTTCGCCATGTTGGCCAGGCTGGTCTCGAA
2561 CTCCTGACCTCAGATGATCCACTCACCCCAGCCTCCCAAAGTGCTGGGATTACAGACGTGAGCCACTGCGCCCGGCGCAA
2641 GTCTTTGTTAAAAGTAGAGATGGAGGCCAGGCGCAGTGGCTCACTCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGG
2721 CAGATCACGAGGTCAGGAGATCGAGACCATCTTGGCTAACACGGTGAAACCCCGTCTCTACTGAAAATACAAAAAATTAG
2801 CCGGGCAGGGTGGCGGGCGCCTGTAGTCCCAGCTACTCCGAGGCTGAAGCAGGAGAATGGCGTCAAGCGGCGAGGCGGAG
2881 CTTGCGGTGAGCCGAGATCATGCCGCTGCACTCCAGCCTGGGCAACAGAGCAAGACTCCATCTCAAAAAGAAAAAAAAAG
2961 TAGAGATGGGATCTCTAGCCTCCTAAGTTAATTTAGCCTCCCAAATGCCAGACAAAGAATCTAACATAAAATTTACCTTG
3041 AATAAGATATATGATATTGATTCTGAGCTGCTTTGTATTTTTTCTGACTTTGGCATCTGTATCTTGGTGCTTTCTGTTAG
3121 ACTGGTAGAGTTTAAGAACCTAAGGAGTATGCATTGTACTTCAGTGCTAACTTTTTTCTTCATTTACTTTCTGTGTATAT
3201 AGGCAGCATATTTTTTTTGTAGAACATTAACCCAGATTGCTAATAGCTTCATGTTACGGCATTCTTCCACACAGTCCAGA
3281 TTGATTTAAGGAAAAGCAGAAATGGAAGTCAAAGTGTGTTATAAATTGAGACTGAAAAACATGCTTTAAAAAATAGATTT
3361 AATTTCTTACACTGTGAATAGCCATTGTATTGTTTTGTTTCTGATAAATCAGTTGTTTTGGGCCCCTATTTTTGAACTGT
3441 TAAAAAATTTTGATGCTTTTCGTGGATAAAAGTAGTGCCTCTCTTTATACAACTGATGGGGTTTTAAAAAGTGTAAATTG
3521 CCTTTTTTGTTAAACTTATTTTAAATGCTTTAGTATTTAAAGGGTGTATGTTATTAATTAATCTGCATATTTGTAACGCA
3601 AATAACTACTTCCTGATTTACATCTCAATATATTCTTCTTTCATTTGCCCAATTTAAAAAATACGTAGTCTCTATTGTTG
3681 CTGTTTACTAATAGTTTTAGATCCCAATGTGTATTAGAATTATAGCTACAAAAAGTTGCAAGTAAAATTTAGCAATTTCC
3761 TATTCAAACAGGATCTCATTAGTATGTTTTTTAATGTGTAGAATTAACACTTTAAAATAAACAGGTGTGAAAATTATAAA
3841 GGAATATATATGACAATTATTTTCTGTACATTAATGTCTAAACATTATACTTACTTTTTCATAATAAAGGAAATTTTGGA
3921 ACCAAATTTGCTGAGTTT
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' ucUUGGAGCCGACC--CCGCCCGa 5'
            |:||  ||| ||  ||||||| 
Target 5' ttAGCC-GGGCAGGGTGGCGGGCg 3'
 2797 - 2819 157.00 -25.90
2 
miRNA  3' ucuUGGAG----CCGACCCCGCCCGa 5'
             ||:|:    ||||| ||| ||| 
Target 5' agcACTTTGGGAGGCTGAGGCAGGCa 3'
 2697 - 2722 133.00 -18.50
3 
miRNA  3' ucuuggaGCCGACCCCGCC-CGa 5'
                 |||| | ||||| || 
Target 5' cgtcaagCGGC-GAGGCGGAGCt 3'
 2861 - 2882 122.00 -21.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSM6649091 5 COSMIC
COSN31557876 14 COSMIC
COSN26974128 24 COSMIC
COSN30186027 79 COSMIC
COSN31525042 92 COSMIC
COSN30164879 98 COSMIC
COSN29269646 177 COSMIC
COSN31515571 316 COSMIC
COSN31600268 346 COSMIC
COSN8111839 413 COSMIC
COSN9689087 545 COSMIC
COSN26217126 881 COSMIC
COSN6370804 1154 COSMIC
COSN31962988 1726 COSMIC
COSN16465345 2160 COSMIC
COSN8291232 2485 COSMIC
COSN5692675 2815 COSMIC
COSN25498601 2841 COSMIC
COSN16079393 3207 COSMIC
COSN9689088 3419 COSMIC
COSN9689089 3478 COSMIC
COSN17567631 3501 COSMIC
COSN21099512 3843 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1288134212 4 dbSNP
rs774551976 6 dbSNP
rs1450178102 8 dbSNP
rs759527888 11 dbSNP
rs1372355351 14 dbSNP
rs1432588572 15 dbSNP
rs1422216159 19 dbSNP
rs894786610 20 dbSNP
rs767605566 22 dbSNP
rs752503177 27 dbSNP
rs755997812 30 dbSNP
rs1268050141 31 dbSNP
rs763745771 32 dbSNP
rs753438010 33 dbSNP
rs1300388902 37 dbSNP
rs757001978 38 dbSNP
rs778273090 51 dbSNP
rs573528300 60 dbSNP
rs542151712 65 dbSNP
rs1308379375 66 dbSNP
rs999404758 82 dbSNP
rs1297939832 84 dbSNP
rs1367743856 89 dbSNP
rs1031230753 92 dbSNP
rs1295892226 114 dbSNP
rs1382099174 117 dbSNP
rs1368925053 121 dbSNP
rs918208747 152 dbSNP
rs958007398 161 dbSNP
rs1242009702 172 dbSNP
rs1365168766 175 dbSNP
rs1254078736 177 dbSNP
rs1169513193 184 dbSNP
rs1431899681 192 dbSNP
rs989773214 194 dbSNP
rs1200163138 199 dbSNP
rs966951099 203 dbSNP
rs1346081175 210 dbSNP
rs1269442353 222 dbSNP
rs562319582 223 dbSNP
rs765278420 227 dbSNP
rs1188924866 235 dbSNP
rs925442941 239 dbSNP
rs911243361 243 dbSNP
rs1274775030 255 dbSNP
rs1206794902 257 dbSNP
rs964002677 271 dbSNP
rs111481640 272 dbSNP
rs1272849600 278 dbSNP
rs1227246041 280 dbSNP
rs1038758694 290 dbSNP
rs183306323 297 dbSNP
rs185823273 313 dbSNP
rs1308742492 314 dbSNP
rs1047249977 322 dbSNP
rs532227845 324 dbSNP
rs1380185277 325 dbSNP
rs1167090843 330 dbSNP
rs1466400829 335 dbSNP
rs1051374911 337 dbSNP
rs1173818166 344 dbSNP
rs1432543801 354 dbSNP
rs1251836510 355 dbSNP
rs941635396 367 dbSNP
rs1055931496 382 dbSNP
rs145783705 391 dbSNP
rs1481867265 397 dbSNP
rs894820961 406 dbSNP
rs1195571300 407 dbSNP
rs1346203712 409 dbSNP
rs1011902249 414 dbSNP
rs1231651592 417 dbSNP
rs1323454219 419 dbSNP
rs1289058963 433 dbSNP
rs1172739539 436 dbSNP
rs1348831141 443 dbSNP
rs73697038 444 dbSNP
rs898971610 445 dbSNP
rs906303316 448 dbSNP
rs999667434 454 dbSNP
rs1443886905 456 dbSNP
rs1330143468 457 dbSNP
rs112200058 474 dbSNP
rs1033796509 480 dbSNP
rs764724061 504 dbSNP
rs958085193 522 dbSNP
rs1393125228 530 dbSNP
rs1443812049 531 dbSNP
rs1258637447 535 dbSNP
rs959438056 547 dbSNP
rs1013632565 550 dbSNP
rs1024942752 554 dbSNP
rs966961203 560 dbSNP
rs1279057442 576 dbSNP
rs1010828664 580 dbSNP
rs1018172662 585 dbSNP
rs140757704 587 dbSNP
rs866607284 587 dbSNP
rs1310308086 591 dbSNP
rs1451723985 595 dbSNP
rs766022399 597 dbSNP
rs976788912 599 dbSNP
rs1389263345 602 dbSNP
rs958255675 616 dbSNP
rs1233726079 618 dbSNP
rs534958192 627 dbSNP
rs1325968292 631 dbSNP
rs191120407 633 dbSNP
rs114211825 636 dbSNP
rs141229483 639 dbSNP
rs1444444057 640 dbSNP
rs910070615 640 dbSNP
rs1051386373 641 dbSNP
rs556723301 643 dbSNP
rs1445786818 644 dbSNP
rs940620566 646 dbSNP
rs1037645648 652 dbSNP
rs1432915715 653 dbSNP
rs1210580675 661 dbSNP
rs1177283994 668 dbSNP
rs1263952025 681 dbSNP
rs991608521 682 dbSNP
rs1244936479 687 dbSNP
rs916200664 689 dbSNP
rs950282378 697 dbSNP
rs1046076507 699 dbSNP
rs906162800 703 dbSNP
rs183315668 716 dbSNP
rs1169325351 721 dbSNP
rs1400478121 727 dbSNP
rs1463074396 733 dbSNP
rs866060687 738 dbSNP
rs757557313 739 dbSNP
rs188049527 746 dbSNP
rs553372293 748 dbSNP
rs1430025696 759 dbSNP
rs1024996452 768 dbSNP
rs1190914224 772 dbSNP
rs902492704 774 dbSNP
rs1199647065 775 dbSNP
rs1242104884 775 dbSNP
rs1453442943 783 dbSNP
rs1130289 786 dbSNP
rs1289727656 786 dbSNP
rs999916459 786 dbSNP
rs192145120 790 dbSNP
rs182862704 796 dbSNP
rs188686551 801 dbSNP
rs958529019 807 dbSNP
rs536561966 811 dbSNP
rs192571416 812 dbSNP
rs545353253 828 dbSNP
rs954473992 828 dbSNP
rs998092369 828 dbSNP
rs184963826 852 dbSNP
rs1302001457 856 dbSNP
rs1409984270 862 dbSNP
rs1372094521 885 dbSNP
rs1217101273 888 dbSNP
rs1257667730 889 dbSNP
rs1170862177 902 dbSNP
rs1408622107 908 dbSNP
rs1419389760 915 dbSNP
rs544852449 920 dbSNP
rs1479304189 926 dbSNP
rs951437432 937 dbSNP
rs754715188 938 dbSNP
rs1206741154 943 dbSNP
rs189075279 945 dbSNP
rs1436971142 948 dbSNP
rs753121539 950 dbSNP
rs1017467517 952 dbSNP
rs962822543 956 dbSNP
rs1321338463 958 dbSNP
rs532289597 972 dbSNP
rs545567823 997 dbSNP
rs574297363 1011 dbSNP
rs1351926627 1021 dbSNP
rs937217204 1030 dbSNP
rs1441069319 1032 dbSNP
rs1354264673 1039 dbSNP
rs1335293764 1042 dbSNP
rs1416593565 1043 dbSNP
rs1170338009 1048 dbSNP
rs1055645595 1058 dbSNP
rs1175768107 1061 dbSNP
rs950315359 1065 dbSNP
rs1414317430 1066 dbSNP
rs528027665 1088 dbSNP
rs1429727508 1089 dbSNP
rs981635488 1102 dbSNP
rs1480436239 1135 dbSNP
rs1162130929 1147 dbSNP
rs1349202184 1161 dbSNP
rs1212054327 1162 dbSNP
rs927653688 1165 dbSNP
rs191426715 1172 dbSNP
rs1358313401 1189 dbSNP
rs574897039 1193 dbSNP
rs1046541104 1205 dbSNP
rs1399174745 1216 dbSNP
rs537496960 1222 dbSNP
rs1304269215 1223 dbSNP
rs1362954549 1225 dbSNP
rs184676623 1239 dbSNP
rs1032717011 1242 dbSNP
rs35658347 1246 dbSNP
rs146945916 1247 dbSNP
rs1404515971 1256 dbSNP
rs1039588945 1266 dbSNP
rs1321628549 1276 dbSNP
rs996801903 1281 dbSNP
rs899641074 1282 dbSNP
rs998123474 1289 dbSNP
rs1418708718 1292 dbSNP
rs1223974400 1295 dbSNP
rs1183348221 1300 dbSNP
rs1442597786 1301 dbSNP
rs954896698 1302 dbSNP
rs1029955461 1310 dbSNP
rs1466201260 1322 dbSNP
rs749835683 1336 dbSNP
rs1242301570 1338 dbSNP
rs530695731 1342 dbSNP
rs962097106 1344 dbSNP
rs1321940577 1352 dbSNP
rs1476214409 1359 dbSNP
rs1291646111 1369 dbSNP
rs550409068 1370 dbSNP
rs1412523244 1376 dbSNP
rs1314804823 1378 dbSNP
rs1423890921 1385 dbSNP
rs1004658711 1386 dbSNP
rs1378428161 1397 dbSNP
rs116469718 1402 dbSNP
rs920222868 1405 dbSNP
rs1167118705 1406 dbSNP
rs1298623021 1409 dbSNP
rs1423007537 1409 dbSNP
rs1168999632 1412 dbSNP
rs962794635 1426 dbSNP
rs1451236647 1427 dbSNP
rs1259651063 1429 dbSNP
rs1345987659 1440 dbSNP
rs1185395899 1441 dbSNP
rs1488496200 1442 dbSNP
rs1247986099 1443 dbSNP
rs1012925127 1447 dbSNP
rs1023107133 1448 dbSNP
rs1291488626 1454 dbSNP
rs1229694050 1456 dbSNP
rs1309748495 1459 dbSNP
rs771406058 1463 dbSNP
rs971498109 1465 dbSNP
rs779024580 1467 dbSNP
rs57151588 1469 dbSNP
rs924891941 1473 dbSNP
rs779270371 1479 dbSNP
rs1368343858 1483 dbSNP
rs917152887 1492 dbSNP
rs750036861 1495 dbSNP
rs56323901 1497 dbSNP
rs1365248363 1498 dbSNP
rs1168981587 1502 dbSNP
rs772341363 1505 dbSNP
rs988236521 1511 dbSNP
rs924051000 1518 dbSNP
rs1426592564 1531 dbSNP
rs576784486 1533 dbSNP
rs1352194635 1539 dbSNP
rs148044018 1541 dbSNP
rs1039450428 1542 dbSNP
rs1481795129 1543 dbSNP
rs893775167 1565 dbSNP
rs765000509 1571 dbSNP
rs1313308918 1574 dbSNP
rs1448361251 1589 dbSNP
rs1221830933 1590 dbSNP
rs1050662870 1597 dbSNP
rs535449493 1601 dbSNP
rs1308913944 1603 dbSNP
rs890698845 1605 dbSNP
rs921103483 1609 dbSNP
rs761690355 1610 dbSNP
rs11025 1613 dbSNP
rs1050944203 1618 dbSNP
rs1184931528 1642 dbSNP
rs994968706 1643 dbSNP
rs141734801 1648 dbSNP
rs1004118216 1694 dbSNP
rs773107102 1701 dbSNP
rs898478132 1704 dbSNP
rs1236252340 1706 dbSNP
rs1439059879 1707 dbSNP
rs1183844336 1716 dbSNP
rs1027343213 1726 dbSNP
rs1409976248 1728 dbSNP
rs1412550848 1738 dbSNP
rs1012956067 1739 dbSNP
rs958639251 1743 dbSNP
rs1195644125 1752 dbSNP
rs150597016 1760 dbSNP
rs1130296 1764 dbSNP
rs1265580880 1769 dbSNP
rs558428682 1776 dbSNP
rs60193291 1797 dbSNP
rs545886072 1798 dbSNP
rs1241384055 1806 dbSNP
rs971301603 1826 dbSNP
rs138637117 1829 dbSNP
rs924410450 1839 dbSNP
rs1408181619 1840 dbSNP
rs1334551788 1847 dbSNP
rs935446974 1859 dbSNP
rs956518806 1860 dbSNP
rs1446774113 1865 dbSNP
rs1159807654 1867 dbSNP
rs750052018 1872 dbSNP
rs990390431 1874 dbSNP
rs1054302849 1880 dbSNP
rs915314137 1884 dbSNP
rs1280504840 1885 dbSNP
rs1245374339 1888 dbSNP
rs1353212228 1896 dbSNP
rs932016385 1898 dbSNP
rs914930761 1909 dbSNP
rs967668397 1921 dbSNP
rs1268839999 1922 dbSNP
rs1207043407 1926 dbSNP
rs1348771299 1940 dbSNP
rs1050380920 1957 dbSNP
rs764348417 1958 dbSNP
rs975169360 1965 dbSNP
rs1384675065 1967 dbSNP
rs1312649572 1971 dbSNP
rs1204991065 1972 dbSNP
rs528104448 1986 dbSNP
rs1365910754 1988 dbSNP
rs1036547516 2002 dbSNP
rs1380065150 2014 dbSNP
rs1383760972 2016 dbSNP
rs766403388 2022 dbSNP
rs1163425753 2028 dbSNP
rs933708479 2031 dbSNP
rs1426171858 2071 dbSNP
rs1387410233 2072 dbSNP
rs897966948 2074 dbSNP
rs1457259502 2079 dbSNP
rs79032546 2089 dbSNP
rs1027845863 2090 dbSNP
rs1195390340 2091 dbSNP
rs908339647 2110 dbSNP
rs1261168388 2119 dbSNP
rs1223418657 2120 dbSNP
rs939951169 2129 dbSNP
rs1435032612 2130 dbSNP
rs1012629109 2134 dbSNP
rs4338068 2144 dbSNP
rs573738085 2147 dbSNP
rs1245060223 2151 dbSNP
rs1342745045 2157 dbSNP
rs1271904515 2159 dbSNP
rs1190440873 2160 dbSNP
rs1023941554 2163 dbSNP
rs1323664256 2172 dbSNP
rs1406383445 2182 dbSNP
rs1428823864 2184 dbSNP
rs773920167 2185 dbSNP
rs1470455609 2195 dbSNP
rs1038250686 2202 dbSNP
rs779420592 2206 dbSNP
rs1424483714 2209 dbSNP
rs1420699595 2210 dbSNP
rs1170108289 2211 dbSNP
rs1474716399 2212 dbSNP
rs561345206 2235 dbSNP
rs1372516388 2241 dbSNP
rs1200302208 2247 dbSNP
rs1490900134 2250 dbSNP
rs971316145 2255 dbSNP
rs977313122 2266 dbSNP
rs1438132787 2271 dbSNP
rs1274889424 2283 dbSNP
rs1212679304 2285 dbSNP
rs758914997 2287 dbSNP
rs542557014 2296 dbSNP
rs1224864960 2297 dbSNP
rs1012903617 2303 dbSNP
rs1282193158 2304 dbSNP
rs753315946 2310 dbSNP
rs1355412578 2315 dbSNP
rs989989427 2316 dbSNP
rs915349029 2319 dbSNP
rs1396496066 2321 dbSNP
rs1044373405 2322 dbSNP
rs61259525 2325 dbSNP
rs10089823 2328 dbSNP
rs1032270645 2332 dbSNP
rs891942031 2339 dbSNP
rs1037047021 2346 dbSNP
rs570318027 2355 dbSNP
rs146309772 2356 dbSNP
rs1021853462 2358 dbSNP
rs930841410 2361 dbSNP
rs1205508594 2366 dbSNP
rs1320749990 2373 dbSNP
rs1269259175 2378 dbSNP
rs1480887101 2379 dbSNP
rs1282096553 2380 dbSNP
rs1201943396 2381 dbSNP
rs964953189 2383 dbSNP
rs975097093 2384 dbSNP
rs1027977606 2385 dbSNP
rs1440514120 2386 dbSNP
rs758619164 2387 dbSNP
rs547088710 2391 dbSNP
rs1403909733 2397 dbSNP
rs1471258193 2397 dbSNP
rs977774813 2397 dbSNP
rs1023995258 2407 dbSNP
rs908373919 2408 dbSNP
rs1410492751 2409 dbSNP
rs939834728 2412 dbSNP
rs1185276385 2413 dbSNP
rs1302929984 2424 dbSNP
rs1032038543 2425 dbSNP
rs1318317605 2429 dbSNP
rs1281765908 2451 dbSNP
rs1222869915 2453 dbSNP
rs1407133274 2455 dbSNP
rs957305802 2461 dbSNP
rs1316173339 2462 dbSNP
rs1339408825 2462 dbSNP
rs1227556723 2463 dbSNP
rs1336129351 2473 dbSNP
rs181895243 2479 dbSNP
rs1347063960 2487 dbSNP
rs1028077953 2488 dbSNP
rs1227604311 2496 dbSNP
rs1292398695 2498 dbSNP
rs1385571690 2499 dbSNP
rs1490794801 2504 dbSNP
rs535919505 2518 dbSNP
rs986156877 2519 dbSNP
rs1242496242 2523 dbSNP
rs1446592844 2525 dbSNP
rs1186570798 2527 dbSNP
rs1194010094 2528 dbSNP
rs1374799405 2535 dbSNP
rs185012763 2536 dbSNP
rs944740920 2539 dbSNP
rs972082692 2542 dbSNP
rs1386383352 2545 dbSNP
rs1312577325 2550 dbSNP
rs1215703252 2551 dbSNP
rs1364086245 2552 dbSNP
rs919542335 2558 dbSNP
rs1296693743 2559 dbSNP
rs1383816500 2564 dbSNP
rs1382379307 2565 dbSNP
rs1304695833 2567 dbSNP
rs1319717872 2570 dbSNP
rs930872493 2577 dbSNP
rs569262676 2578 dbSNP
rs1185485808 2586 dbSNP
rs1416694791 2586 dbSNP
rs1490403421 2594 dbSNP
rs538544968 2596 dbSNP
rs1270661128 2616 dbSNP
rs1219831236 2618 dbSNP
rs1234580879 2619 dbSNP
rs536811400 2630 dbSNP
rs1309845370 2631 dbSNP
rs894622718 2634 dbSNP
rs1244578700 2635 dbSNP
rs1218134956 2637 dbSNP
rs1467843984 2641 dbSNP
rs1403370049 2644 dbSNP
rs1389659093 2646 dbSNP
rs948846933 2648 dbSNP
rs1463448539 2651 dbSNP
rs558446623 2652 dbSNP
rs1352733162 2658 dbSNP
rs1169319018 2660 dbSNP
rs1480452763 2667 dbSNP
rs1430835645 2668 dbSNP
rs1045536371 2669 dbSNP
rs1196752458 2683 dbSNP
rs1479914066 2702 dbSNP
rs1267094547 2706 dbSNP
rs906940884 2709 dbSNP
rs998964170 2723 dbSNP
rs1481887984 2724 dbSNP
rs1250173880 2730 dbSNP
rs1315698777 2740 dbSNP
rs1361458753 2743 dbSNP
rs1265081414 2748 dbSNP
rs1031293706 2749 dbSNP
rs1330798335 2753 dbSNP
rs893050118 2761 dbSNP
rs1237721449 2767 dbSNP
rs1330550499 2772 dbSNP
rs578140777 2775 dbSNP
rs1470262645 2784 dbSNP
rs1407581515 2786 dbSNP
rs1173708483 2798 dbSNP
rs1465231621 2800 dbSNP
rs1028133420 2801 dbSNP
rs565256424 2804 dbSNP
rs540436990 2805 dbSNP
rs1248901773 2811 dbSNP
rs1206014774 2815 dbSNP
rs953906520 2816 dbSNP
rs1201921634 2820 dbSNP
rs554327401 2823 dbSNP
rs1019021028 2824 dbSNP
rs966152199 2829 dbSNP
rs972478025 2831 dbSNP
rs1453270270 2839 dbSNP
rs919231817 2840 dbSNP
rs952414699 2841 dbSNP
rs1157241674 2843 dbSNP
rs985082625 2849 dbSNP
rs1451182110 2866 dbSNP
rs1454622826 2869 dbSNP
rs764492661 2870 dbSNP
rs916149587 2872 dbSNP
rs1399575059 2873 dbSNP
rs1186080879 2877 dbSNP
rs572899153 2878 dbSNP
rs1045929576 2880 dbSNP
rs139466355 2887 dbSNP
rs773176806 2891 dbSNP
rs1246496730 2895 dbSNP
rs1053209593 2900 dbSNP
rs1384582047 2904 dbSNP
rs1306200254 2905 dbSNP
rs746061006 2922 dbSNP
rs1326434218 2924 dbSNP
rs1319733138 2925 dbSNP
rs1011641446 2929 dbSNP
rs201618958 2936 dbSNP
rs1262757875 2938 dbSNP
rs889692139 2941 dbSNP
rs1387511009 2942 dbSNP
rs1343085953 2945 dbSNP
rs1008057422 2951 dbSNP
rs1161910699 2951 dbSNP
rs1472768167 2951 dbSNP
rs561357292 2952 dbSNP
rs1195504415 2956 dbSNP
rs1476947089 2959 dbSNP
rs1262803763 2960 dbSNP
rs1203136488 2961 dbSNP
rs1263769198 2964 dbSNP
rs1223527315 2966 dbSNP
rs1490767488 2967 dbSNP
rs1289328217 2972 dbSNP
rs1209107621 2975 dbSNP
rs1019369816 2976 dbSNP
rs1463050834 2980 dbSNP
rs1177386341 2983 dbSNP
rs1250413056 2988 dbSNP
rs966536526 3003 dbSNP
rs1406402634 3009 dbSNP
rs1367787471 3010 dbSNP
rs1420097901 3013 dbSNP
rs144304726 3018 dbSNP
rs1026797287 3027 dbSNP
rs1375598817 3032 dbSNP
rs1405286860 3043 dbSNP
rs952106857 3045 dbSNP
rs1169703544 3050 dbSNP
rs1468916077 3051 dbSNP
rs1464086480 3053 dbSNP
rs984779672 3057 dbSNP
rs745972003 3058 dbSNP
rs1407747773 3066 dbSNP
rs1197982996 3070 dbSNP
rs1463594478 3077 dbSNP
rs916205098 3079 dbSNP
rs530148015 3090 dbSNP
rs1316677724 3096 dbSNP
rs1263238758 3097 dbSNP
rs1224958030 3107 dbSNP
rs970258429 3109 dbSNP
rs1273413440 3123 dbSNP
rs1436270746 3137 dbSNP
rs981614975 3139 dbSNP
rs1336749921 3140 dbSNP
rs1297589905 3151 dbSNP
rs1373926659 3154 dbSNP
rs1464522464 3161 dbSNP
rs1399566155 3163 dbSNP
rs1177316864 3165 dbSNP
rs548132399 3188 dbSNP
rs1471073484 3198 dbSNP
rs1392951086 3203 dbSNP
rs928789638 3206 dbSNP
rs1052898084 3211 dbSNP
rs934425153 3211 dbSNP
rs1343885598 3213 dbSNP
rs1457309577 3219 dbSNP
rs914294197 3240 dbSNP
rs947107485 3243 dbSNP
rs1049384537 3248 dbSNP
rs1277418116 3253 dbSNP
rs758359988 3258 dbSNP
rs1325822360 3259 dbSNP
rs889705140 3265 dbSNP
rs1445196100 3267 dbSNP
rs1376897527 3268 dbSNP
rs28516448 3282 dbSNP
rs1454690597 3291 dbSNP
rs1357519739 3292 dbSNP
rs1251278513 3311 dbSNP
rs73697039 3315 dbSNP
rs200424559 3317 dbSNP
rs1409876544 3319 dbSNP
rs897008364 3339 dbSNP
rs1156686649 3341 dbSNP
rs1438979114 3348 dbSNP
rs1265631015 3349 dbSNP
rs1185373616 3356 dbSNP
rs1481968122 3367 dbSNP
rs747270339 3370 dbSNP
rs1236386940 3374 dbSNP
rs546503747 3377 dbSNP
rs190301341 3389 dbSNP
rs1238479229 3391 dbSNP
rs1430946666 3402 dbSNP
rs550104399 3411 dbSNP
rs1353588957 3423 dbSNP
rs1316284251 3427 dbSNP
rs1230559635 3429 dbSNP
rs1376994786 3439 dbSNP
rs1302396174 3445 dbSNP
rs1431747926 3453 dbSNP
rs1347218447 3456 dbSNP
rs1026430686 3458 dbSNP
rs768972942 3462 dbSNP
rs570057228 3463 dbSNP
rs1476578187 3465 dbSNP
rs1165323078 3466 dbSNP
rs1421998111 3473 dbSNP
rs1169084272 3484 dbSNP
rs952222745 3489 dbSNP
rs1476169524 3491 dbSNP
rs1355062882 3510 dbSNP
rs1215472189 3511 dbSNP
rs199748807 3512 dbSNP
rs377091395 3512 dbSNP
rs529406089 3522 dbSNP
rs549455778 3523 dbSNP
rs1320513052 3528 dbSNP
rs569276539 3536 dbSNP
rs1304028172 3538 dbSNP
rs1342480772 3540 dbSNP
rs538213895 3548 dbSNP
rs1347581353 3564 dbSNP
rs538933906 3589 dbSNP
rs1295125732 3596 dbSNP
rs1036335977 3599 dbSNP
rs956262374 3611 dbSNP
rs773197066 3616 dbSNP
rs1230345215 3633 dbSNP
rs1420876554 3643 dbSNP
rs552117449 3644 dbSNP
rs1480593909 3655 dbSNP
rs1270046723 3663 dbSNP
rs181183668 3665 dbSNP
rs557361052 3666 dbSNP
rs534503644 3668 dbSNP
rs554112238 3671 dbSNP
rs1265326197 3675 dbSNP
rs947100650 3682 dbSNP
rs1320014057 3701 dbSNP
rs574137177 3704 dbSNP
rs1223646669 3718 dbSNP
rs1256255186 3736 dbSNP
rs1218232051 3744 dbSNP
rs535180023 3745 dbSNP
rs796494925 3748 dbSNP
rs555019473 3749 dbSNP
rs574913042 3750 dbSNP
rs1484660831 3751 dbSNP
rs543840636 3751 dbSNP
rs564089396 3752 dbSNP
rs1366674281 3755 dbSNP
rs1040994212 3783 dbSNP
rs60370380 3790 dbSNP
rs1185442900 3794 dbSNP
rs897054338 3804 dbSNP
rs1397424395 3813 dbSNP
rs550377879 3814 dbSNP
rs1048664111 3824 dbSNP
rs79073746 3826 dbSNP
rs1425107249 3830 dbSNP
rs1006280070 3841 dbSNP
rs1431768479 3844 dbSNP
rs1267116240 3845 dbSNP
rs1178226893 3862 dbSNP
rs540510176 3867 dbSNP
rs1304682122 3878 dbSNP
rs1022989435 3879 dbSNP
rs1236425328 3882 dbSNP
rs1198130123 3883 dbSNP
rs560096265 3885 dbSNP
rs570884181 3888 dbSNP
rs1288509701 3893 dbSNP
rs1035980238 3899 dbSNP
rs1307454764 3902 dbSNP
rs1242223019 3914 dbSNP
rs1374625731 3926 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084065. RNA binding protein: AGO2. Condition:CLIP_emetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' ucuuggagCCGACC--CCGCCCGa 5'
                  ||| ||  ||||||| 
Target 5' --------GGCAGGGUGGCGGGCg 3'
 		1 - 16
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM4903833
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_a
Location of target site NM_181787 | 3UTR | AAUACAAAAAAUUAGCCGGGCAGGGUGGCGG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903834
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_b
Location of target site NM_181787 | 3UTR | CAAAAAAUUAGCCGGGCAGGGUGGCGG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM4903836
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_a
Location of target site NM_181787 | 3UTR | CUACUGAAAAUACAAAAAAUUAGCCGGGCAGGGUGGCGG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM4903837
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_b
Location of target site NM_181787 | 3UTR | UACAAAAAAUUAGCCGGGCAGGGUGGCGG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 5 for dataset GSM4903838
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_c
Location of target site NM_181787 | 3UTR | UUAGCCGGGCAGGGUGGCGG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 6 for dataset GSM1084065
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_emetine_AbnovaAb
Location of target site ENST00000414645.2 | 3UTR | GGCAGGGUGGCGGGCGCCUGUAGUCCCAGCUA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
91 hsa-miR-4707-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT442514 SYT7 synaptotagmin 7 2 4
MIRT457799 NQO2 N-ribosyldihydronicotinamide:quinone reductase 2 2 2
MIRT466318 THRA thyroid hormone receptor, alpha 2 2
MIRT486129 TRAF3 TNF receptor associated factor 3 2 2
MIRT492341 SEPT8 septin 8 2 2
MIRT495690 KCNC3 potassium voltage-gated channel subfamily C member 3 2 2
MIRT496928 DPYSL5 dihydropyrimidinase like 5 2 2
MIRT499518 MAFK MAF bZIP transcription factor K 2 2
MIRT501367 REXO1 RNA exonuclease 1 homolog 2 4
MIRT501636 PIAS4 protein inhibitor of activated STAT 4 2 4
MIRT521071 SLC25A16 solute carrier family 25 member 16 2 2
MIRT525700 PCYT2 phosphate cytidylyltransferase 2, ethanolamine 2 2
MIRT532722 DDTL D-dopachrome tautomerase like 2 2
MIRT533137 WWC1 WW and C2 domain containing 1 2 4
MIRT537288 G3BP1 G3BP stress granule assembly factor 1 2 4
MIRT570555 PHF21B PHD finger protein 21B 2 2
MIRT573469 MTRNR2L9 MT-RNR2-like 9 2 2
MIRT576750 Tmem127 transmembrane protein 127 2 2
MIRT609342 DAAM2 dishevelled associated activator of morphogenesis 2 2 2
MIRT610638 PIGM phosphatidylinositol glycan anchor biosynthesis class M 2 2
MIRT612591 RANGAP1 Ran GTPase activating protein 1 2 2
MIRT614237 WDR53 WD repeat domain 53 2 4
MIRT622784 PGK1 phosphoglycerate kinase 1 2 2
MIRT628880 MED16 mediator complex subunit 16 2 2
MIRT629550 SPN sialophorin 2 2
MIRT634714 DDX19B DEAD-box helicase 19B 2 2
MIRT634932 GTF2H2C GTF2H2 family member C 2 4
MIRT635341 RBL1 RB transcriptional corepressor like 1 2 2
MIRT637838 CPT1A carnitine palmitoyltransferase 1A 2 2
MIRT644311 NFKBID NFKB inhibitor delta 2 2
MIRT649206 KIAA1715 lunapark, ER junction formation factor 2 2
MIRT657262 HSPA4L heat shock protein family A (Hsp70) member 4 like 2 2
MIRT658919 DPY19L4 dpy-19 like 4 2 2
MIRT663608 SEC23B Sec23 homolog B, coat complex II component 2 2
MIRT667425 MFAP2 microfibril associated protein 2 2 2
MIRT667667 KREMEN1 kringle containing transmembrane protein 1 2 2
MIRT668144 GDPD1 glycerophosphodiester phosphodiesterase domain containing 1 2 2
MIRT668540 ERGIC1 endoplasmic reticulum-golgi intermediate compartment 1 2 2
MIRT670039 NFRKB nuclear factor related to kappaB binding protein 2 2
MIRT670875 RAB10 RAB10, member RAS oncogene family 2 2
MIRT672694 ZNF677 zinc finger protein 677 2 2
MIRT673107 MFSD2A major facilitator superfamily domain containing 2A 2 2
MIRT673508 TNFAIP8L1 TNF alpha induced protein 8 like 1 2 4
MIRT674244 NUP62 nucleoporin 62 2 4
MIRT676541 IRGQ immunity related GTPase Q 2 2
MIRT676787 CXorf38 chromosome X open reading frame 38 2 4
MIRT677600 PRKX protein kinase, X-linked 2 2
MIRT678607 MRPL17 mitochondrial ribosomal protein L17 2 2
MIRT678940 MYADM myeloid associated differentiation marker 2 2
MIRT679104 CD99 CD99 molecule (Xg blood group) 2 2
MIRT679196 WNT2B Wnt family member 2B 2 2
MIRT679325 ZMYM4 zinc finger MYM-type containing 4 2 2
MIRT679634 BRMS1L breast cancer metastasis-suppressor 1 like 2 2
MIRT679819 TMEM106B transmembrane protein 106B 2 2
MIRT679898 FBXO48 F-box protein 48 2 2
MIRT680579 ZNF784 zinc finger protein 784 2 2
MIRT680600 SZT2 SZT2, KICSTOR complex subunit 2 2
MIRT682991 RNF40 ring finger protein 40 2 4
MIRT683483 ZNF7 zinc finger protein 7 2 2
MIRT683681 MICA MHC class I polypeptide-related sequence A 2 2
MIRT684122 CEP104 centrosomal protein 104 2 2
MIRT684774 MYO1F myosin IF 2 2
MIRT685698 BHMT2 betaine--homocysteine S-methyltransferase 2 2 2
MIRT686471 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT687940 HMGB1 high mobility group box 1 2 2
MIRT688627 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT689110 ZBTB25 zinc finger and BTB domain containing 25 2 2
MIRT690063 MBD1 methyl-CpG binding domain protein 1 2 2
MIRT691067 NUGGC nuclear GTPase, germinal center associated 2 2
MIRT691317 KIAA1841 KIAA1841 2 2
MIRT692778 SYNPO2L synaptopodin 2 like 2 2
MIRT694087 KIAA0930 KIAA0930 2 2
MIRT696148 WDR59 WD repeat domain 59 2 2
MIRT696176 GNB5 G protein subunit beta 5 2 2
MIRT696434 SUGP1 SURP and G-patch domain containing 1 2 2
MIRT697974 TSPAN6 tetraspanin 6 2 2
MIRT698917 SPEM1 spermatid maturation 1 2 2
MIRT699312 SLC35F5 solute carrier family 35 member F5 2 4
MIRT700500 PTPN4 protein tyrosine phosphatase, non-receptor type 4 2 2
MIRT700557 PTBP1 polypyrimidine tract binding protein 1 2 2
MIRT701817 MRPL37 mitochondrial ribosomal protein L37 2 2
MIRT702045 METTL21A methyltransferase like 21A 2 2
MIRT702215 LPCAT1 lysophosphatidylcholine acyltransferase 1 2 2
MIRT702337 KLHL7 kelch like family member 7 2 2
MIRT704139 DNAL1 dynein axonemal light chain 1 2 2
MIRT704189 LDHD lactate dehydrogenase D 2 2
MIRT705344 ATP1B3 ATPase Na+/K+ transporting subunit beta 3 2 2
MIRT706097 ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 2 2
MIRT709068 FAHD1 fumarylacetoacetate hydrolase domain containing 1 2 2
MIRT717579 VTA1 vesicle trafficking 1 2 2
MIRT722440 ZBTB7B zinc finger and BTB domain containing 7B 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-4707 Gemcitabine 60750 NSC613327 approved resistant High Pancreatic Cancer cell line (PANC-1)
hsa-mir-4707 Fluorouracil 3385 NSC19893 approved resistant High Pancreatic Cancer cell line (PANC-1)
hsa-mir-4707 Dabrafenib 44462760 NSC764134 approved resistant cell line (A375)
hsa-mir-4707 Cisplatin 5460033 NSC119875 approved resistant cell line (BxPC3)
hsa-miR-4707-3p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-4707-3p Tripterygium wilfordii Hook F sensitive tissue
hsa-miR-4707-3p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-4707-3p Tamoxifen 2733525 NSC180973 approved resistant cell line (LCC2)
hsa-miR-4707-3p Neoadjuvant chemotherapy resistant tissue (breast cancer)
hsa-miR-4707-3p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)

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