pre-miRNA Information
pre-miRNA hsa-mir-3120   
Genomic Coordinates chr1: 172138808 - 172138888
Description Homo sapiens miR-3120 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3120-5p
Sequence 13| CCUGUCUGUGCCUGCUGUACA |33
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 19 1 + 172138838 26449202, 27587585 MiREDiBase
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN26637643 8 COSMIC
COSN31603497 11 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs750386761 8 dbSNP
rs760725207 9 dbSNP
rs766486759 10 dbSNP
rs754055278 12 dbSNP
rs755288536 19 dbSNP
rs754726014 21 dbSNP
Putative Targets

Gene Information
Gene Symbol CORO2A   
Synonyms CLIPINB, IR10, WDR2
Description coronin 2A
Transcript NM_003389   
Other Transcripts NM_052820   
Expression
Putative miRNA Targets on CORO2A
3'UTR of CORO2A
(miRNA target sites are highlighted)
>CORO2A|NM_003389|3'UTR
   1 GCAGAGACCTCTGCCCTCCTCACCCTCAGGGACACCACTCGGCTCCATGGGGAGGTTTAGAACCAAACCACAAGTCCCCT
  81 CAAGGACAACCACTATTTCTATATTTTTTACCAGAAAACAAAACTCTCCATCGCTGAAAGAGATTCCAGTGGGACATGGT
 161 GCCGTTTTTCTGTTTGCCTTCTTGCAACAACAGTTTCTGAATTGACTTTGTTTTCAGATGATGCCTTCTGTTGAATTCTG
 241 TTATTAAGGGCCCATGATGAGCTGTAACTTCTCAAGAGGAAAGAACACAGTAGAAAACTAGAGCTGGAAGGATCTAGGTT
 321 GACCTGTCTGTGATTTTCAAACTGTGGTCCAGAGAATAGGGGAAGACTGGGCCAGACGCAGTGGCTCATGCCTGTAATCC
 401 CAGCACTCTGGGAGGCTGAGGTGGGCGGATTGCTTGAGGTCGGGAGTTTGAAACCAGTCTCACCAGGCGCAGTGGCTCAC
 481 GCCTGTAATTCCAGCATGTTGGGAGGCCGAGGCTGGTGGATCACGAGGTCAGCAGTTCGAGACCAGCCTGACCAACATGG
 561 TGAAACCCCATCTCTACTAAAAATACAAAAAAATTAGCTGGGCGTGGTGGCAGGCGCCTGTAATTCCAGCGACTTGGGAG
 641 GCTGAGGCAGGAGAATTGCTTGAAACCGGAAGGCGGGGGTTGCAGTGAGCTGAGATTGTGCCACTGCACTCTAACCTGGG
 721 CAATAAGAGCAAAAGTCTGTCTCAAAAAAAAAAAAAAAAGAAAGAAACCAGCCTGGCCAACATGGTGAAACCCCGTCTCT
 801 ACTAAAAATACAAAAATTAGGCAGGGCGTGGTGGTTCACGCCTATAATCCCAGAACTTTGGGAGGCCAAGCTGGGCGGAT
 881 CTTCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAACCCCGTCTCCACTAAAAATAAAAAATTAACCAGG
 961 CATGGTGGTGCATGCCTGTAATCCCAGCTATTTGGGAGGCTGAGGCAGGAGAATCGCTTGAGCCTGGGAGGCGGAGGTTG
1041 CAGTGAACCAAGATCATGCCACTTCACTCCAGCCTGGGTGACAGAGTGAGACTCCGTCTCAAAAAAAAAAAGTTGGCCAG
1121 CCGTGGTGGTGAGCGTCTGTAGTCCCTGCTATTCGGGAGGCTGAGATAGGAGAATTGCTTGAACCTGGGAGGTGGAGGTT
1201 GCTATGAGCCACGATTGCGGACTGCACTGCAGCCTGGGTGACAGAGCGAGACTCCATCTCCAAAAAAAAAAAAAAAAAGA
1281 GAGAGAGAATAGGGGAAGACTAAGCAGGAAGGCTGTGTCTCCCTTCCCCACACTGTATTCCAACCAGACAGCTCCCTTCT
1361 ATTTTATATGTTGGGCTAGTATGAAAAACAATTCTGCTAGGAAAAAAAAATTTTTTTAGAAGTTTGAAAGCTAGTGATTT
1441 GACCCAAGTTCCTCATTTTACAGCTGGGGAAACTAAGGCCTAGAGAGAGGCAAGTGATATTTGTTTCATGGCAGGGCTGG
1521 GCTGAGATCCTGCTTTTCTGGGTCTGTCTTTTTGCTCTTTTGGGTCTGATGCAGTTCTCAGCCCAAAGAGTAGAAATCTG
1601 TTGCTTCTGGCCTCAGCTGTGCCCCAGCTTACTCAGTGACCTCTTGCAAGTCCTGCCCTCTCTGGTCTCAGTTTCTTCAT
1681 CTGAACCAGGGGTACCCTGGAACAAGCTGCTCTCTGCAGGATCTGCCACCTGAAACCTTGACCTAAGAGAAAACTACCTG
1761 TGGGGTGATCTGGGTTTGCTACAGAAACTAACGGACACTGGCAAGGGGTCAGAGGCATTCAACCCAATTCTACAACACAG
1841 GCAGGTGGTCAAAACCAACCTTTCCAACCAGAATCAGCCTGATATGGATAGATGCTGTCCCTTATGGAGGGACGCAGACT
1921 TCAGAACTGTGCCCATGACTGCTGACTGCCACCACCAAGGCCCTCAGGTACACAGCCTGCCTCCTGCAGGATGATGTGGG
2001 CAGATTTCAGCCCTAGTTAACAGAAGAGTCCCCCAGGAGGTAGGGGGCCCCCATCACTGGAGACATGCCAGCAGAGCCTC
2081 TGGCCACCTAACCAGGAGGTCTTCTGAAATGACTATACGAGGTAAAGAAGTAGTACCAGATGGTCCCAAAGTTCCCTTTT
2161 AGCCTGAAAGCTTTTCTTTGTCCCTCCTTAGTGAATCTGTGTTCCGAGCCCTACTCTAAAGTTCAGTGGTCAATACAATA
2241 GTCCACCAAGAGACTGGGAATGATTAGAAGTGAAATTGGTCCCTCCTTACCAAGGAGGGGCAGATGATCTCCATTGCACA
2321 GGGCGATTAGATTCTGGAGCTGAGGTGGGGACTGCAGGAGGCCACCTAGTCTGGTAGGTTTCAACCCAAGCTGTGTACAT
2401 TAGAATTCCCTTGGGAGCGTGCAGGAAATACAGATGCCCATGCCACATTCCAGACCAACTGAAGCTGAATCTCCAGAGTA
2481 GGGCCTGTATGGTCATATAAGCTCCACAGGTGATCTGCAGTACAGTGAAGATGGAAGACTGCATGTGTACCTATTTGCAA
2561 TAAAGATGAAGAGGACAGCAAGCTCCAGACAGGAGCTGGGACTCAACCCAGATCTCTTAAGTCCTGCCTGGTGGCTCCTT
2641 AAAAGTCCAGAAGTGTTGCCCCAAGCCCTCCCTCAACATCTCTGGGAACCGCAGCTGCAGCACGATGGGGGTTCAGTGCC
2721 CCTGTTTGCCCCTTACCCAGCTGTGGTTTATTCTGCTTGTATGTCTGCACAGGCCGGATGCTCGTGTTCCTTGTCTTATT
2801 CTCCATTTACTCAGTCACTGGGGCTCACTCCCGTCTGATGCACTAGCCAAGATTGCCTTAGTGTGCTCCAGAAAAGAAGG
2881 CCAAATCCCAGGCATTGTCAGGGCAGCAGAGCTCTACAGGATAGGCTTACCTTTCCCACCTGTGTGGCTAGCACTTCACA
2961 GTTTACAAATTCCTCCCACCTCCACTCAGTGACACATGCTGTTCTAACACAGGTCAGGCAGGCATTACAGTCCCCATGTT
3041 CAGAATCAAAGACCTAGCCTCAGAGAAGTGAAGAAACATCATGCCAAGGTCATTGACTGCCAAGCGGTAGAGGTGGGGTT
3121 GCATCCAGAGAGCTTCCCGGTATGCCTCTGCACAATGCCATTCCTTGGCCAGCTCCCTCCACCCCAAGGGACCCAGACTG
3201 CACACTTAACAAACAGGACACAGGTGTCTTTGAACAAACTTTTTTGTATTATTATTTTTACATCTAGAATAAATTATTTA
3281 AATTATTTCACAGCAAGGGAGAGGGATAGGTAATTTTTATCAGATATTTTTTTAAACCATCTGTTTTTTAAATTACATTT
3361 TTGTTTATGTTCTTGAGCTGATGTAGTGGAACTTGCCTAGCACATTCAGGTCCCAGCCAGTTGGCAGAGCATGCTCTCAT
3441 CTCCTTATTCCATACCCTGGGCGTCCCCTTTCTGTTGACTCAGGAACTTTCTGAGAATGAGGACAGCACTAGGAGATGAG
3521 CTTTGGCAGGTATCCACCTTAACGCTACAATAATTGTGCTTCCTGAAACAAAACTTGAGATTGTATCATAGAAGGAAACA
3601 GGAAGTCAGAAATCAAATCTATGCTTTTAATTGAAACCGTGCCTGAAACAGTTTGAATGATTGTTTTAATGTTGTTTCTG
3681 AAATTCCTTGTACCTTTGTGAAAAATAATGATAATAAATAAAAGTGAAAATAAATAGATGTGGAATATGCAATGGAAATA
3761 ATGTAACAAAATAATAAACATCTGGCCATTTTACTACAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' acaUGUCGUCCG-UGUCUGUCc 5'
             |||||| ||  ||||||| 
Target 5' aggACAGCAAGCTCCAGACAGg 3'
2572 - 2593 166.00 -24.40
2
miRNA  3' acaUGUCGUCCG--U-GUCUGUCc 5'
             || |:|  |  | ||||||| 
Target 5' cacACTGTATTCCAACCAGACAGc 3'
1329 - 1352 144.00 -12.00
3
miRNA  3' acaUGUCGUCCGUGUCUGUCc 5'
             ||| ||||: |||:||| 
Target 5' ctaACA-CAGGT-CAGGCAGg 3'
3004 - 3022 144.00 -22.50
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN26971626 9 COSMIC
COSN30138687 22 COSMIC
COSN30134536 36 COSMIC
COSN26507607 40 COSMIC
COSN30525398 46 COSMIC
COSN28195034 91 COSMIC
COSN31580145 189 COSMIC
COSN4943240 509 COSMIC
COSN15660902 1276 COSMIC
COSN9273559 1277 COSMIC
COSN18756102 1279 COSMIC
COSN32214088 1396 COSMIC
COSN23194163 1410 COSMIC
COSN6602298 1914 COSMIC
COSN32214087 2026 COSMIC
COSN32214086 2127 COSMIC
COSN23818023 2565 COSMIC
COSN32214085 2588 COSMIC
COSN20569338 2716 COSMIC
COSN22359382 2979 COSMIC
COSN9690797 3319 COSMIC
COSN32061964 3326 COSMIC
COSN20106381 3350 COSMIC
COSN21114475 3646 COSMIC
COSN32214084 3782 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs747955238 1 dbSNP
rs1464526799 3 dbSNP
rs1358472520 6 dbSNP
rs780749628 7 dbSNP
rs1421277099 14 dbSNP
rs754641035 16 dbSNP
rs1415375354 17 dbSNP
rs1177632926 18 dbSNP
rs746542448 19 dbSNP
rs758983217 23 dbSNP
rs1359787183 30 dbSNP
rs750955249 33 dbSNP
rs1482599287 37 dbSNP
rs765758376 38 dbSNP
rs373319617 40 dbSNP
rs754196820 41 dbSNP
rs985743862 42 dbSNP
rs764329316 46 dbSNP
rs1239723177 47 dbSNP
rs1376402311 48 dbSNP
rs1445863500 53 dbSNP
rs1309704124 54 dbSNP
rs955007164 60 dbSNP
rs922273338 70 dbSNP
rs978938697 73 dbSNP
rs988519320 81 dbSNP
rs536305434 84 dbSNP
rs968926622 101 dbSNP
rs1211074779 110 dbSNP
rs137969522 113 dbSNP
rs1457031246 129 dbSNP
rs553477657 132 dbSNP
rs762461559 133 dbSNP
rs41274268 136 dbSNP
rs769370715 138 dbSNP
rs1187490035 151 dbSNP
rs1023277860 156 dbSNP
rs1473841747 157 dbSNP
rs1166229047 159 dbSNP
rs1019677199 163 dbSNP
rs1014190295 164 dbSNP
rs1207530852 171 dbSNP
rs1466353129 174 dbSNP
rs1333562369 178 dbSNP
rs896450604 179 dbSNP
rs200907246 188 dbSNP
rs1311970453 203 dbSNP
rs889879307 206 dbSNP
rs994238183 218 dbSNP
rs1275771239 225 dbSNP
rs701379 231 dbSNP
rs1198918528 235 dbSNP
rs995301186 237 dbSNP
rs1460300495 238 dbSNP
rs1042446281 243 dbSNP
rs1257570841 247 dbSNP
rs1038470496 248 dbSNP
rs1191597620 249 dbSNP
rs941496744 250 dbSNP
rs1423041968 261 dbSNP
rs1478159034 264 dbSNP
rs889968168 270 dbSNP
rs1036944879 276 dbSNP
rs1415937767 281 dbSNP
rs1050392438 288 dbSNP
rs1464413619 300 dbSNP
rs1404749014 312 dbSNP
rs1302030945 321 dbSNP
rs1402572369 323 dbSNP
rs1301483904 328 dbSNP
rs949069720 330 dbSNP
rs532585604 361 dbSNP
rs1465712097 362 dbSNP
rs934282184 377 dbSNP
rs917600121 378 dbSNP
rs922265219 381 dbSNP
rs988466993 384 dbSNP
rs934392913 390 dbSNP
rs925671573 393 dbSNP
rs1310071949 404 dbSNP
rs1355405244 409 dbSNP
rs1256970715 420 dbSNP
rs978550162 423 dbSNP
rs970263925 426 dbSNP
rs1203931815 427 dbSNP
rs925032798 429 dbSNP
rs1488688467 432 dbSNP
rs776338359 439 dbSNP
rs1423016019 441 dbSNP
rs569889434 442 dbSNP
rs1176986510 445 dbSNP
rs1192806937 456 dbSNP
rs1467352731 463 dbSNP
rs549868368 468 dbSNP
rs1257989070 469 dbSNP
rs1179943987 475 dbSNP
rs1034999334 480 dbSNP
rs994143478 481 dbSNP
rs897164855 483 dbSNP
rs1301471677 494 dbSNP
rs1017400520 496 dbSNP
rs1238405409 497 dbSNP
rs989489784 508 dbSNP
rs1482719643 509 dbSNP
rs867648482 516 dbSNP
rs1219346657 524 dbSNP
rs1200154031 525 dbSNP
rs1488170562 527 dbSNP
rs889948753 534 dbSNP
rs1192025941 538 dbSNP
rs1315448497 539 dbSNP
rs1049919088 554 dbSNP
rs530096554 557 dbSNP
rs1379685785 558 dbSNP
rs950752248 562 dbSNP
rs1160321538 568 dbSNP
rs901457269 570 dbSNP
rs1456944762 571 dbSNP
rs1053319351 575 dbSNP
rs1369272133 592 dbSNP
rs769281439 601 dbSNP
rs561375286 602 dbSNP
rs1308997072 603 dbSNP
rs372389188 604 dbSNP
rs1321236835 606 dbSNP
rs1222367751 607 dbSNP
rs563898087 612 dbSNP
rs925652337 614 dbSNP
rs1027063771 615 dbSNP
rs1237351773 616 dbSNP
rs541064488 621 dbSNP
rs1440020396 622 dbSNP
rs1395870040 625 dbSNP
rs191664368 626 dbSNP
rs1411511323 628 dbSNP
rs897023862 630 dbSNP
rs368175440 631 dbSNP
rs1351052309 634 dbSNP
rs1463748522 641 dbSNP
rs915715396 667 dbSNP
rs545294275 668 dbSNP
rs146214625 674 dbSNP
rs556353294 679 dbSNP
rs1379061766 684 dbSNP
rs896417163 685 dbSNP
rs1314944925 688 dbSNP
rs1316077388 702 dbSNP
rs1218272439 708 dbSNP
rs1370193552 712 dbSNP
rs1055165609 713 dbSNP
rs1206346854 716 dbSNP
rs1235734602 721 dbSNP
rs1482890374 722 dbSNP
rs1182320648 723 dbSNP
rs1419420729 730 dbSNP
rs371917817 731 dbSNP
rs1169569517 732 dbSNP
rs1185121855 735 dbSNP
rs1423866859 736 dbSNP
rs1422963701 737 dbSNP
rs1238564651 743 dbSNP
rs1332602551 755 dbSNP
rs1358877137 756 dbSNP
rs545627729 756 dbSNP
rs1456185589 757 dbSNP
rs1026342645 760 dbSNP
rs111467436 760 dbSNP
rs1217624146 760 dbSNP
rs1218055347 760 dbSNP
rs1279150606 760 dbSNP
rs1338556906 760 dbSNP
rs147040514 760 dbSNP
rs1491057237 760 dbSNP
rs1237007735 763 dbSNP
rs997578466 764 dbSNP
rs1397379598 767 dbSNP
rs1209955183 768 dbSNP
rs1487050201 779 dbSNP
rs1043523739 780 dbSNP
rs947517295 792 dbSNP
rs959876941 793 dbSNP
rs1170383292 794 dbSNP
rs919144656 795 dbSNP
rs1415357965 808 dbSNP
rs1176118729 811 dbSNP
rs913379588 818 dbSNP
rs112090093 820 dbSNP
rs944251078 821 dbSNP
rs1317857209 823 dbSNP
rs971982114 827 dbSNP
rs1444813960 828 dbSNP
rs961635445 831 dbSNP
rs1326662905 833 dbSNP
rs542784175 834 dbSNP
rs1274447089 839 dbSNP
rs912814387 840 dbSNP
rs1006040383 844 dbSNP
rs1388651430 854 dbSNP
rs1388679652 856 dbSNP
rs1161320547 857 dbSNP
rs747531801 859 dbSNP
rs1215720239 864 dbSNP
rs1380626086 867 dbSNP
rs1160285094 868 dbSNP
rs1286124073 870 dbSNP
rs1027016127 871 dbSNP
rs1437402818 875 dbSNP
rs1379371937 876 dbSNP
rs141701363 877 dbSNP
rs1199150151 882 dbSNP
rs1452769435 884 dbSNP
rs1264694523 886 dbSNP
rs1195893898 889 dbSNP
rs1209717152 894 dbSNP
rs1488933821 896 dbSNP
rs1288565035 900 dbSNP
rs1238518897 902 dbSNP
rs1353247361 904 dbSNP
rs1275598989 908 dbSNP
rs1028431173 910 dbSNP
rs1235698701 912 dbSNP
rs1323200126 914 dbSNP
rs1329374244 920 dbSNP
rs1322995288 922 dbSNP
rs775668978 927 dbSNP
rs998285575 930 dbSNP
rs553755686 931 dbSNP
rs1374307182 940 dbSNP
rs7865264 946 dbSNP
rs1239361723 952 dbSNP
rs1309835505 953 dbSNP
rs901363943 958 dbSNP
rs961461880 964 dbSNP
rs1053268313 965 dbSNP
rs1015816644 970 dbSNP
rs1013428519 971 dbSNP
rs1359669234 976 dbSNP
rs999121987 978 dbSNP
rs186709866 984 dbSNP
rs1471884870 987 dbSNP
rs903544343 995 dbSNP
rs571186842 996 dbSNP
rs1042764851 998 dbSNP
rs558846087 1000 dbSNP
rs945078888 1006 dbSNP
rs892222928 1008 dbSNP
rs948454943 1015 dbSNP
rs746259993 1016 dbSNP
rs1296747932 1019 dbSNP
rs779175958 1021 dbSNP
rs1283110056 1024 dbSNP
rs1056912812 1027 dbSNP
rs113934284 1030 dbSNP
rs938458908 1032 dbSNP
rs757536907 1033 dbSNP
rs1457638152 1036 dbSNP
rs912796958 1042 dbSNP
rs1253366784 1048 dbSNP
rs1441197065 1053 dbSNP
rs138686399 1057 dbSNP
rs1369149404 1058 dbSNP
rs1476203263 1062 dbSNP
rs1279817331 1067 dbSNP
rs1423151204 1077 dbSNP
rs1202341846 1080 dbSNP
rs749368868 1082 dbSNP
rs150159551 1091 dbSNP
rs1398295978 1095 dbSNP
rs373647567 1096 dbSNP
rs1333387086 1100 dbSNP
rs963359013 1108 dbSNP
rs909862480 1110 dbSNP
rs908627215 1112 dbSNP
rs961408689 1112 dbSNP
rs1341038055 1118 dbSNP
rs1279944167 1119 dbSNP
rs1227614719 1122 dbSNP
rs574069092 1123 dbSNP
rs1343252417 1124 dbSNP
rs984163656 1125 dbSNP
rs960607245 1134 dbSNP
rs549953893 1135 dbSNP
rs1486721360 1142 dbSNP
rs1191575343 1147 dbSNP
rs1334629176 1150 dbSNP
rs368536103 1154 dbSNP
rs1415793104 1155 dbSNP
rs536799963 1158 dbSNP
rs1399703432 1162 dbSNP
rs1171977685 1166 dbSNP
rs1171475616 1167 dbSNP
rs777839914 1169 dbSNP
rs1295814582 1176 dbSNP
rs1339204108 1183 dbSNP
rs1028336422 1184 dbSNP
rs998234942 1191 dbSNP
rs555509015 1192 dbSNP
rs1232955672 1207 dbSNP
rs115432048 1212 dbSNP
rs1350672804 1213 dbSNP
rs1215017564 1214 dbSNP
rs967969864 1215 dbSNP
rs766045280 1218 dbSNP
rs1190093870 1223 dbSNP
rs1431287143 1229 dbSNP
rs1197902684 1240 dbSNP
rs181597013 1243 dbSNP
rs1455542231 1244 dbSNP
rs868769036 1246 dbSNP
rs148294306 1247 dbSNP
rs1359380269 1248 dbSNP
rs1009237706 1253 dbSNP
rs1278255477 1255 dbSNP
rs1199520899 1261 dbSNP
rs1386627648 1262 dbSNP
rs1304629335 1267 dbSNP
rs1320044294 1272 dbSNP
rs1373587206 1272 dbSNP
rs10985139 1273 dbSNP
rs200107116 1274 dbSNP
rs1216700169 1275 dbSNP
rs1317691721 1276 dbSNP
rs1746239 1277 dbSNP
rs1176744056 1278 dbSNP
rs72327744 1278 dbSNP
rs1366132659 1279 dbSNP
rs1379586482 1279 dbSNP
rs1491560087 1279 dbSNP
rs778918442 1279 dbSNP
rs779725363 1279 dbSNP
rs1008797340 1281 dbSNP
rs1040156772 1281 dbSNP
rs891319835 1281 dbSNP
rs999507247 1281 dbSNP
rs1338504703 1282 dbSNP
rs1335586119 1283 dbSNP
rs1176910534 1289 dbSNP
rs1225912159 1289 dbSNP
rs1310680918 1289 dbSNP
rs143257131 1294 dbSNP
rs1469688850 1295 dbSNP
rs1196508991 1304 dbSNP
rs920187956 1305 dbSNP
rs1480919606 1314 dbSNP
rs1483253976 1318 dbSNP
rs1167976489 1326 dbSNP
rs565608892 1327 dbSNP
rs1178816833 1332 dbSNP
rs1043719313 1341 dbSNP
rs185450356 1350 dbSNP
rs1165262930 1358 dbSNP
rs1419558689 1366 dbSNP
rs761624130 1368 dbSNP
rs1464455099 1373 dbSNP
rs200393105 1376 dbSNP
rs1471981243 1379 dbSNP
rs1170416965 1384 dbSNP
rs1237298846 1391 dbSNP
rs776223777 1394 dbSNP
rs940075941 1396 dbSNP
rs1459298712 1399 dbSNP
rs531627006 1411 dbSNP
rs992285359 1411 dbSNP
rs547304745 1413 dbSNP
rs34480810 1418 dbSNP
rs55635628 1418 dbSNP
rs542818958 1419 dbSNP
rs568026151 1422 dbSNP
rs1290438431 1435 dbSNP
rs919083853 1436 dbSNP
rs1036226872 1458 dbSNP
rs941924933 1463 dbSNP
rs1314133018 1464 dbSNP
rs373607602 1489 dbSNP
rs1009226505 1491 dbSNP
rs1447030862 1496 dbSNP
rs956426332 1500 dbSNP
rs986467027 1509 dbSNP
rs932621089 1517 dbSNP
rs921268612 1519 dbSNP
rs1019093549 1520 dbSNP
rs1440910916 1534 dbSNP
rs1359082408 1536 dbSNP
rs41274266 1549 dbSNP
rs976804702 1557 dbSNP
rs1326034310 1558 dbSNP
rs1008626258 1560 dbSNP
rs1404120595 1562 dbSNP
rs1413500343 1568 dbSNP
rs1338443767 1573 dbSNP
rs776036289 1576 dbSNP
rs965469253 1582 dbSNP
rs1399650866 1588 dbSNP
rs370146704 1590 dbSNP
rs1270962018 1598 dbSNP
rs1159672789 1599 dbSNP
rs1362460316 1603 dbSNP
rs1441776723 1604 dbSNP
rs549557587 1605 dbSNP
rs1031789616 1614 dbSNP
rs1178276628 1617 dbSNP
rs977592613 1618 dbSNP
rs969303837 1619 dbSNP
rs1281873530 1628 dbSNP
rs1488812399 1629 dbSNP
rs1487000176 1634 dbSNP
rs1214680223 1635 dbSNP
rs772507255 1640 dbSNP
rs560004740 1644 dbSNP
rs996972917 1650 dbSNP
rs534712619 1651 dbSNP
rs1189833462 1652 dbSNP
rs898749398 1653 dbSNP
rs1038624211 1657 dbSNP
rs180739320 1665 dbSNP
rs577570567 1666 dbSNP
rs1400172081 1672 dbSNP
rs557293498 1681 dbSNP
rs1013586320 1690 dbSNP
rs1319299626 1696 dbSNP
rs1347181047 1706 dbSNP
rs894143363 1712 dbSNP
rs1035389413 1717 dbSNP
rs1056879462 1727 dbSNP
rs1369912558 1729 dbSNP
rs939417647 1732 dbSNP
rs189562304 1737 dbSNP
rs576325415 1740 dbSNP
rs376408996 1744 dbSNP
rs1284601293 1751 dbSNP
rs1448369700 1756 dbSNP
rs1218846894 1757 dbSNP
rs753991 1764 dbSNP
rs1469153728 1765 dbSNP
rs941845544 1774 dbSNP
rs1378992640 1779 dbSNP
rs956856653 1787 dbSNP
rs1159228826 1790 dbSNP
rs1018584878 1792 dbSNP
rs567814068 1793 dbSNP
rs1393511590 1795 dbSNP
rs1441334699 1795 dbSNP
rs953120449 1799 dbSNP
rs1028738969 1813 dbSNP
rs1367637074 1817 dbSNP
rs547576993 1822 dbSNP
rs1050325397 1824 dbSNP
rs1276158184 1827 dbSNP
rs1434905862 1830 dbSNP
rs1238154288 1842 dbSNP
rs1365581241 1856 dbSNP
rs931941455 1859 dbSNP
rs996962865 1878 dbSNP
rs774648585 1881 dbSNP
rs976752112 1884 dbSNP
rs1017123482 1885 dbSNP
rs771079098 1886 dbSNP
rs903774194 1891 dbSNP
rs924688677 1897 dbSNP
rs1215941611 1898 dbSNP
rs1236665024 1902 dbSNP
rs1437774266 1909 dbSNP
rs701378 1914 dbSNP
rs1234707705 1916 dbSNP
rs1471834837 1917 dbSNP
rs1056429342 1923 dbSNP
rs968872933 1926 dbSNP
rs939387836 1933 dbSNP
rs1461826967 1946 dbSNP
rs905267690 1951 dbSNP
rs571709369 1954 dbSNP
rs184740384 1958 dbSNP
rs142428490 1967 dbSNP
rs1427324801 1969 dbSNP
rs1329407093 1973 dbSNP
rs777776973 1981 dbSNP
rs1337056079 1985 dbSNP
rs1189583206 1987 dbSNP
rs1292370709 1990 dbSNP
rs1335085106 1994 dbSNP
rs1476996406 1996 dbSNP
rs1234688572 2002 dbSNP
rs147680752 2005 dbSNP
rs942164 2022 dbSNP
rs1196927532 2026 dbSNP
rs145467027 2028 dbSNP
rs988395086 2030 dbSNP
rs560249230 2034 dbSNP
rs1489110003 2040 dbSNP
rs1258232194 2044 dbSNP
rs780017364 2051 dbSNP
rs1191712076 2054 dbSNP
rs897509095 2063 dbSNP
rs1283661080 2082 dbSNP
rs759335832 2086 dbSNP
rs866650275 2095 dbSNP
rs1891323 2118 dbSNP
rs765128828 2119 dbSNP
rs756921021 2120 dbSNP
rs931889056 2123 dbSNP
rs1355487583 2130 dbSNP
rs1416278210 2132 dbSNP
rs1279320503 2142 dbSNP
rs12238311 2160 dbSNP
rs1228595430 2180 dbSNP
rs574302185 2183 dbSNP
rs563788677 2185 dbSNP
rs879250803 2186 dbSNP
rs1466714164 2187 dbSNP
rs115062197 2205 dbSNP
rs963109347 2206 dbSNP
rs947491826 2208 dbSNP
rs770687005 2209 dbSNP
rs1469302460 2213 dbSNP
rs192924976 2216 dbSNP
rs760635615 2220 dbSNP
rs190407678 2225 dbSNP
rs887365063 2231 dbSNP
rs1193641933 2233 dbSNP
rs991680115 2236 dbSNP
rs958880063 2238 dbSNP
rs1478790614 2240 dbSNP
rs928842872 2255 dbSNP
rs981700077 2266 dbSNP
rs1375564764 2270 dbSNP
rs961697031 2276 dbSNP
rs1015045902 2279 dbSNP
rs1286818538 2282 dbSNP
rs1383782708 2295 dbSNP
rs1382368864 2298 dbSNP
rs1003530886 2299 dbSNP
rs45442996 2302 dbSNP
rs951919284 2313 dbSNP
rs1045107748 2314 dbSNP
rs576433982 2324 dbSNP
rs995935188 2325 dbSNP
rs1486324542 2327 dbSNP
rs1257337966 2331 dbSNP
rs1207071247 2354 dbSNP
rs1207595360 2366 dbSNP
rs1466950455 2377 dbSNP
rs1192987869 2382 dbSNP
rs1395601965 2386 dbSNP
rs1455244078 2386 dbSNP
rs901689702 2387 dbSNP
rs185074582 2390 dbSNP
rs1362651560 2392 dbSNP
rs999436511 2399 dbSNP
rs10985135 2403 dbSNP
rs1392789803 2410 dbSNP
rs1220983278 2419 dbSNP
rs1327230042 2421 dbSNP
rs554333836 2424 dbSNP
rs534080043 2428 dbSNP
rs1316643622 2437 dbSNP
rs1295305956 2444 dbSNP
rs1390111721 2445 dbSNP
rs1306415891 2446 dbSNP
rs1317551333 2450 dbSNP
rs911805447 2459 dbSNP
rs1271486955 2461 dbSNP
rs1042139243 2477 dbSNP
rs571745146 2478 dbSNP
rs914617549 2480 dbSNP
rs1381818108 2483 dbSNP
rs1175357146 2486 dbSNP
rs1249241880 2489 dbSNP
rs751800 2492 dbSNP
rs1160897490 2497 dbSNP
rs973049196 2498 dbSNP
rs141724222 2504 dbSNP
rs1166121473 2506 dbSNP
rs928791952 2510 dbSNP
rs1460946532 2512 dbSNP
rs981688707 2516 dbSNP
rs1401061415 2517 dbSNP
rs1172956455 2519 dbSNP
rs748243954 2522 dbSNP
rs1163846934 2524 dbSNP
rs1467115463 2525 dbSNP
rs41313315 2530 dbSNP
rs1169671254 2532 dbSNP
rs549012634 2537 dbSNP
rs907523864 2539 dbSNP
rs1234065302 2543 dbSNP
rs951658068 2544 dbSNP
rs1035258402 2551 dbSNP
rs1202403236 2567 dbSNP
rs529148088 2571 dbSNP
rs1480705817 2580 dbSNP
rs1183706961 2603 dbSNP
rs1254701216 2607 dbSNP
rs1362195154 2608 dbSNP
rs1003772690 2618 dbSNP
rs1416463752 2623 dbSNP
rs1424105131 2628 dbSNP
rs115710913 2635 dbSNP
rs1355624361 2654 dbSNP
rs1463922415 2664 dbSNP
rs546773072 2668 dbSNP
rs1023609059 2682 dbSNP
rs1158629852 2688 dbSNP
rs1028663599 2690 dbSNP
rs995882638 2691 dbSNP
rs965846297 2692 dbSNP
rs774723683 2693 dbSNP
rs1212572065 2702 dbSNP
rs771303832 2703 dbSNP
rs1294851644 2704 dbSNP
rs1018766011 2707 dbSNP
rs999435693 2708 dbSNP
rs1308020629 2709 dbSNP
rs1181315463 2711 dbSNP
rs902451442 2726 dbSNP
rs532891889 2743 dbSNP
rs893894928 2746 dbSNP
rs1238834484 2750 dbSNP
rs1052982929 2753 dbSNP
rs999353934 2759 dbSNP
rs1200059744 2773 dbSNP
rs1043666404 2775 dbSNP
rs145830556 2776 dbSNP
rs368331400 2783 dbSNP
rs1315077552 2784 dbSNP
rs543870150 2791 dbSNP
rs192977310 2805 dbSNP
rs763119059 2810 dbSNP
rs1430195462 2817 dbSNP
rs921853439 2827 dbSNP
rs561683500 2832 dbSNP
rs149848288 2833 dbSNP
rs1045961641 2846 dbSNP
rs1346603497 2850 dbSNP
rs1245480534 2855 dbSNP
rs1473066297 2857 dbSNP
rs1280048234 2863 dbSNP
rs940937230 2875 dbSNP
rs574271907 2900 dbSNP
rs1378011467 2907 dbSNP
rs1444940372 2919 dbSNP
rs1214568958 2926 dbSNP
rs1466501974 2935 dbSNP
rs1192357422 2950 dbSNP
rs908098637 2953 dbSNP
rs1253657874 2955 dbSNP
rs554099624 2957 dbSNP
rs1395865882 2959 dbSNP
rs959834109 2966 dbSNP
rs540802589 2975 dbSNP
rs1405825572 2983 dbSNP
rs985066175 2993 dbSNP
rs982286000 2998 dbSNP
rs7039895 2999 dbSNP
rs921640302 3002 dbSNP
rs974455049 3013 dbSNP
rs1023934855 3015 dbSNP
rs565641877 3022 dbSNP
rs1018714599 3031 dbSNP
rs1443630909 3033 dbSNP
rs1222887081 3044 dbSNP
rs1284488889 3048 dbSNP
rs17807775 3053 dbSNP
rs999996421 3054 dbSNP
rs1180140629 3068 dbSNP
rs890559870 3077 dbSNP
rs1435501921 3082 dbSNP
rs1469671784 3084 dbSNP
rs1178055689 3100 dbSNP
rs569284754 3105 dbSNP
rs1460014669 3119 dbSNP
rs1490148337 3121 dbSNP
rs1162546146 3125 dbSNP
rs1393399257 3129 dbSNP
rs1022598327 3136 dbSNP
rs1489782756 3138 dbSNP
rs1290037148 3139 dbSNP
rs1051992234 3143 dbSNP
rs1222287265 3145 dbSNP
rs996003661 3148 dbSNP
rs1351954523 3149 dbSNP
rs1010827134 3151 dbSNP
rs1231011441 3152 dbSNP
rs187833201 3153 dbSNP
rs1272981062 3155 dbSNP
rs1335874044 3159 dbSNP
rs893140743 3163 dbSNP
rs1354881408 3168 dbSNP
rs1311650551 3179 dbSNP
rs377735244 3183 dbSNP
rs1437387556 3197 dbSNP
rs1034385591 3199 dbSNP
rs1238283592 3204 dbSNP
rs1335191433 3213 dbSNP
rs900416998 3214 dbSNP
rs535431083 3216 dbSNP
rs1472988434 3217 dbSNP
rs1164988424 3226 dbSNP
rs1394242108 3228 dbSNP
rs1409232021 3240 dbSNP
rs1308121143 3246 dbSNP
rs1371813447 3250 dbSNP
rs941681898 3251 dbSNP
rs749571266 3252 dbSNP
rs1301053815 3257 dbSNP
rs535358397 3266 dbSNP
rs1268721905 3268 dbSNP
rs1339327159 3281 dbSNP
rs540986557 3283 dbSNP
rs1196839571 3298 dbSNP
rs1047403376 3300 dbSNP
rs748243760 3301 dbSNP
rs907312034 3303 dbSNP
rs781195650 3304 dbSNP
rs938394703 3307 dbSNP
rs1258466457 3319 dbSNP
rs34545711 3326 dbSNP
rs202050950 3327 dbSNP
rs928408283 3328 dbSNP
rs1371070927 3333 dbSNP
rs199745581 3334 dbSNP
rs982274540 3341 dbSNP
rs45514293 3350 dbSNP
rs60542260 3353 dbSNP
rs796979761 3353 dbSNP
rs1432312163 3364 dbSNP
rs1045870640 3367 dbSNP
rs1402480746 3380 dbSNP
rs113628722 3381 dbSNP
rs1316714321 3383 dbSNP
rs1326175622 3385 dbSNP
rs1229834647 3387 dbSNP
rs1300414915 3405 dbSNP
rs1199037052 3408 dbSNP
rs1233647527 3410 dbSNP
rs958335949 3412 dbSNP
rs1031392622 3413 dbSNP
rs1484367212 3415 dbSNP
rs1203563081 3420 dbSNP
rs1435411909 3421 dbSNP
rs866451826 3423 dbSNP
rs978119050 3430 dbSNP
rs1189207396 3431 dbSNP
rs1249813446 3440 dbSNP
rs1259680662 3443 dbSNP
rs1199332924 3446 dbSNP
rs552112737 3447 dbSNP
rs886610841 3449 dbSNP
rs1049772621 3450 dbSNP
rs546511963 3456 dbSNP
rs1172495334 3462 dbSNP
rs771977617 3463 dbSNP
rs930942914 3467 dbSNP
rs921587888 3469 dbSNP
rs974402996 3478 dbSNP
rs1016069628 3482 dbSNP
rs1323215203 3489 dbSNP
rs1369431158 3491 dbSNP
rs1440737696 3493 dbSNP
rs537467009 3505 dbSNP
rs1313984736 3520 dbSNP
rs886365467 3522 dbSNP
rs1350276101 3527 dbSNP
rs1063628 3536 dbSNP
rs1209129302 3539 dbSNP
rs1328302878 3539 dbSNP
rs1256663183 3540 dbSNP
rs911612870 3543 dbSNP
rs745806635 3544 dbSNP
rs1192892087 3549 dbSNP
rs977875810 3550 dbSNP
rs966907537 3558 dbSNP
rs945087437 3562 dbSNP
rs906939893 3565 dbSNP
rs1044197719 3567 dbSNP
rs778811547 3569 dbSNP
rs1161841902 3588 dbSNP
rs1392672807 3589 dbSNP
rs1461407614 3605 dbSNP
rs1340845537 3619 dbSNP
rs1299861117 3623 dbSNP
rs1369894695 3624 dbSNP
rs989797446 3630 dbSNP
rs959307303 3638 dbSNP
rs1383864906 3639 dbSNP
rs1351353672 3641 dbSNP
rs1034333437 3649 dbSNP
rs1467069600 3651 dbSNP
rs989662005 3663 dbSNP
rs1199263891 3664 dbSNP
rs1478460460 3667 dbSNP
rs182264823 3671 dbSNP
rs1001514425 3673 dbSNP
rs1489211548 3677 dbSNP
rs1193575195 3679 dbSNP
rs907217432 3680 dbSNP
rs1250349243 3689 dbSNP
rs1472726176 3690 dbSNP
rs1183842529 3701 dbSNP
rs924253940 3702 dbSNP
rs978488049 3706 dbSNP
rs1166196555 3709 dbSNP
rs954760206 3710 dbSNP
rs1446627922 3718 dbSNP
rs1460867051 3724 dbSNP
rs1297705410 3725 dbSNP
rs1371202843 3737 dbSNP
rs1030352116 3745 dbSNP
rs1291648760 3746 dbSNP
rs1353389329 3751 dbSNP
rs1227522322 3752 dbSNP
rs1257055912 3767 dbSNP
rs1323442550 3775 dbSNP
rs1225086947 3778 dbSNP
rs570285552 3781 dbSNP
rs1321454590 3792 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084064. RNA binding protein: AGO2. Condition:CLIP_noemetine_AbnovaAb HITS-CLIP data was present in GSM1084065. RNA binding protein: AGO2. Condition:CLIP_emetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' acaugucguccguguCUGUCc 5'
                         ||||| 
Target 5' ---------------GACAGg 3'
1 - 6
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084064
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noemetine_AbnovaAb
Location of target site ENST00000343933.5 | 3UTR | GACAGGAGCUGGGACUC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1084065
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_emetine_AbnovaAb
Location of target site ENST00000343933.5 | 3UTR | GACAGGAGCUGGGACU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
134 hsa-miR-3120-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT096972 BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB 2 2
MIRT442624 LOX lysyl oxidase 2 2
MIRT473438 MDM4 MDM4, p53 regulator 2 2
MIRT490011 KIFC2 kinesin family member C2 2 2
MIRT496449 N6AMT1 N-6 adenine-specific DNA methyltransferase 1 2 2
MIRT496752 TGIF2 TGFB induced factor homeobox 2 2 2
MIRT497721 CYP1A1 cytochrome P450 family 1 subfamily A member 1 2 2
MIRT498287 PADI3 peptidyl arginine deiminase 3 2 2
MIRT503195 ACVR1B activin A receptor type 1B 2 4
MIRT504760 TEP1 telomerase associated protein 1 2 4
MIRT517810 UGDH UDP-glucose 6-dehydrogenase 2 6
MIRT519686 ZNF622 zinc finger protein 622 2 4
MIRT520263 URGCP upregulator of cell proliferation 2 2
MIRT523051 ICMT isoprenylcysteine carboxyl methyltransferase 2 2
MIRT525601 OLR1 oxidized low density lipoprotein receptor 1 2 4
MIRT526995 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT528699 TRAF3IP2 TRAF3 interacting protein 2 2 4
MIRT533142 WNT10A Wnt family member 10A 2 2
MIRT537618 ERI1 exoribonuclease 1 2 2
MIRT539707 EIF3H eukaryotic translation initiation factor 3 subunit H 2 2
MIRT539752 CNBP CCHC-type zinc finger nucleic acid binding protein 2 2
MIRT539808 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT539941 IFNAR2 interferon alpha and beta receptor subunit 2 2 2
MIRT540424 FAM83F family with sequence similarity 83 member F 2 2
MIRT540509 CXCL10 C-X-C motif chemokine ligand 10 2 2
MIRT540720 GUF1 GUF1 homolog, GTPase 2 2
MIRT541630 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT542286 POLR3K RNA polymerase III subunit K 2 2
MIRT542456 AKR7A2 aldo-keto reductase family 7 member A2 2 2
MIRT542550 MRPS10 mitochondrial ribosomal protein S10 2 2
MIRT542771 PPAP2B phospholipid phosphatase 3 2 2
MIRT550085 TRAPPC2 trafficking protein particle complex 2 2 2
MIRT551458 CARKD NAD(P)HX dehydratase 2 2
MIRT555622 PHLPP2 PH domain and leucine rich repeat protein phosphatase 2 2 2
MIRT569136 KATNAL1 katanin catalytic subunit A1 like 1 2 2
MIRT572328 HSPB6 heat shock protein family B (small) member 6 2 2
MIRT574607 LZIC leucine zipper and CTNNBIP1 domain containing 2 2
MIRT575583 Mcm8 minichromosome maintenance 8 homologous recombination repair factor 2 4
MIRT576125 Hrk harakiri, BCL2 interacting protein (contains only BH3 domain) 2 5
MIRT576657 Fam216a family with sequence similarity 216, member A 2 2
MIRT607222 ACSM2A acyl-CoA synthetase medium chain family member 2A 2 4
MIRT607292 CD300E CD300e molecule 2 6
MIRT607746 ANGPT4 angiopoietin 4 2 2
MIRT607905 SPRYD4 SPRY domain containing 4 2 2
MIRT608159 HRK harakiri, BCL2 interacting protein 2 7
MIRT608657 ABCF3 ATP binding cassette subfamily F member 3 2 4
MIRT609115 ZNF703 zinc finger protein 703 2 6
MIRT610231 ACOT9 acyl-CoA thioesterase 9 2 2
MIRT610870 NUDCD3 NudC domain containing 3 2 2
MIRT611217 MC2R melanocortin 2 receptor 2 2
MIRT614858 PLEKHA6 pleckstrin homology domain containing A6 2 2
MIRT616966 LMX1A LIM homeobox transcription factor 1 alpha 2 2
MIRT617258 GLIPR1L2 GLI pathogenesis related 1 like 2 2 2
MIRT618009 SLC9A3R2 SLC9A3 regulator 2 2 2
MIRT619067 BSND barttin CLCNK type accessory beta subunit 2 4
MIRT619295 FAM26E calcium homeostasis modulator family member 5 2 2
MIRT619348 GINM1 glycoprotein integral membrane 1 2 2
MIRT619362 CFHR5 complement factor H related 5 2 2
MIRT619541 PIWIL2 piwi like RNA-mediated gene silencing 2 2 2
MIRT619782 NRIP2 nuclear receptor interacting protein 2 2 2
MIRT619994 NPAP1 nuclear pore associated protein 1 2 2
MIRT621030 CDC14B cell division cycle 14B 2 2
MIRT622033 STAT5A signal transducer and activator of transcription 5A 2 2
MIRT622728 PITPNM3 PITPNM family member 3 2 2
MIRT623144 NAV2 neuron navigator 2 2 2
MIRT623600 IPO9 importin 9 2 2
MIRT624608 B3GALT5 beta-1,3-galactosyltransferase 5 2 2
MIRT624905 CTCFL CCCTC-binding factor like 2 2
MIRT625030 SPC24 SPC24, NDC80 kinetochore complex component 2 2
MIRT625688 MCM8 minichromosome maintenance 8 homologous recombination repair factor 2 5
MIRT626531 EMCN endomucin 2 2
MIRT627204 ZDHHC20 zinc finger DHHC-type containing 20 2 2
MIRT628033 LSAMP limbic system-associated membrane protein 2 2
MIRT628203 FREM2 FRAS1 related extracellular matrix protein 2 2 2
MIRT631012 LINS lines homolog 1 2 2
MIRT633195 HSPE1-MOB4 HSPE1-MOB4 readthrough 2 2
MIRT633890 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT634023 MOB4 MOB family member 4, phocein 2 2
MIRT634416 PLCXD3 phosphatidylinositol specific phospholipase C X domain containing 3 2 2
MIRT636866 ARSE arylsulfatase E (chondrodysplasia punctata 1) 2 2
MIRT642527 ANKRD9 ankyrin repeat domain 9 2 2
MIRT645408 FAM110A family with sequence similarity 110 member A 2 2
MIRT645635 SYTL4 synaptotagmin like 4 2 2
MIRT646013 TNFAIP8L2 TNF alpha induced protein 8 like 2 2 2
MIRT646686 ASGR2 asialoglycoprotein receptor 2 2 2
MIRT652838 TACO1 translational activator of cytochrome c oxidase I 2 2
MIRT655156 PHF21B PHD finger protein 21B 2 2
MIRT658491 EXOC7 exocyst complex component 7 2 2
MIRT659398 CORO2A coronin 2A 2 2
MIRT666825 PRCP prolylcarboxypeptidase 2 2
MIRT666866 POU2F2 POU class 2 homeobox 2 2 2
MIRT668224 GABRA1 gamma-aminobutyric acid type A receptor alpha1 subunit 2 2
MIRT673288 PDE3A phosphodiesterase 3A 2 2
MIRT673878 KLF2 Kruppel like factor 2 2 2
MIRT681721 KCNE4 potassium voltage-gated channel subfamily E regulatory subunit 4 2 2
MIRT682406 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT684109 MCM10 minichromosome maintenance 10 replication initiation factor 2 2
MIRT684423 TUFT1 tuftelin 1 2 2
MIRT684684 OR7D2 olfactory receptor family 7 subfamily D member 2 2 2
MIRT686638 TMEM184C transmembrane protein 184C 2 2
MIRT689457 NXN nucleoredoxin 2 2
MIRT689627 NAA30 N(alpha)-acetyltransferase 30, NatC catalytic subunit 2 2
MIRT690773 PLA2G2C phospholipase A2 group IIC 2 2
MIRT690822 SGSM2 small G protein signaling modulator 2 2 2
MIRT693669 MXRA7 matrix remodeling associated 7 2 2
MIRT695553 CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 2 2
MIRT695872 C19orf52 translocase of inner mitochondrial membrane 29 2 2
MIRT698160 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT699933 RUFY2 RUN and FYVE domain containing 2 2 2
MIRT708639 UBE2W ubiquitin conjugating enzyme E2 W 2 2
MIRT710816 RAB11FIP4 RAB11 family interacting protein 4 2 2
MIRT711242 TRAT1 T-cell receptor associated transmembrane adaptor 1 2 2
MIRT711542 MSH3 mutS homolog 3 2 2
MIRT711749 DTX1 deltex E3 ubiquitin ligase 1 2 2
MIRT712303 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT712922 RPF2 ribosome production factor 2 homolog 2 2
MIRT714027 SYDE2 synapse defective Rho GTPase homolog 2 2 2
MIRT714768 TERF1 telomeric repeat binding factor 1 2 2
MIRT714844 ADAMTS17 ADAM metallopeptidase with thrombospondin type 1 motif 17 2 2
MIRT715223 NPVF neuropeptide VF precursor 2 2
MIRT716110 GMPS guanine monophosphate synthase 2 2
MIRT716174 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT716383 C6orf223 chromosome 6 open reading frame 223 2 2
MIRT716527 KSR2 kinase suppressor of ras 2 2 2
MIRT716962 P2RY6 pyrimidinergic receptor P2Y6 2 2
MIRT717605 DSTYK dual serine/threonine and tyrosine protein kinase 2 2
MIRT717696 PTGS1 prostaglandin-endoperoxide synthase 1 2 2
MIRT721360 ENTHD1 ENTH domain containing 1 2 2
MIRT721381 MACC1 MACC1, MET transcriptional regulator 2 2
MIRT721935 RASSF2 Ras association domain family member 2 2 2
MIRT722094 SUSD1 sushi domain containing 1 2 2
MIRT722837 C17orf102 chromosome 17 open reading frame 102 2 2
MIRT722990 TOR1A torsin family 1 member A 2 2
MIRT724174 ABCF2 ATP binding cassette subfamily F member 2 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-3120-5p Cisplatin 5460033 NSC119875 approved sensitive cell line
hsa-miR-3120-5p Prednisone/Azathioprine/Methotrexate/Cyclophosphamide/Mycophenolate mofetil sensitive tissue (myasthenia gravis)
hsa-miR-3120-5p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)

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