miRTarBase - #MIRT659718


—
pre-miRNA Information
pre-miRNA hsa-mir-6769b   
Genomic Coordinates chr1: 206474803 - 206474864
Description Homo sapiens miR-6769b stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6769b-3p
Sequence 42| CCCUCUCUGUCCCACCCAUAG |62
Evidence Experimental
Experiments Meta-analysis
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN26671848 9 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs555627187 3 dbSNP
rs782102173 4 dbSNP
rs201952639 7 dbSNP
rs782001154 9 dbSNP
rs1488064450 15 dbSNP
rs782111367 16 dbSNP
rs370859899 18 dbSNP
rs1305197911 19 dbSNP
Putative Targets

Gene Information
Gene Symbol CCDC93   
Synonyms -
Description coiled-coil domain containing 93
Transcript NM_019044   
Expression
Putative miRNA Targets on CCDC93
3'UTR of CCDC93
(miRNA target sites are highlighted)		 
>CCDC93|NM_019044|3'UTR
   1 ACATCCCCAGCCGTGGCTGTATGTCATTGATTTTACTTTTAAGCACCGTATATCACCTACAAGATCATGAAATGGTTCTG
  81 AAAGCGACAGTAGAGAGATGCAGTTGTGATGATTTCAACAACCTGGATGTTTTCTTTCTCCTCTTTGCTTCCATTCATCT
 161 CTGTTGGCTGCTGTTGATGGAGTCAGACAGTAAACACGTGGCTTGGATAACACCCATCATCCTATGAAGAATATAGGGAG
 241 TACTTGTTCTCTGTTGATTCAACTTTTATGTCTCCAGTAACATTGCGCTTATGAAGGTACCTGTATTTGTATGGACTCTG
 321 AATAAAGAAGAATTCATTTGTTTAGCAAGTATTAGTTCAGCAACCACTGAGAAATAAGCACTGAGGAAGATTCAGAGACG
 401 TGTAAAACACAGTTCCTACTGCACAAGTACCCAGCAGGTGGCCCAGGGAGGCAGATACAGCACACTTGACCGCAGAACTG
 481 GGCTATCCAAGATGTTTTTCAGTAAACAGAAGGCATTTAGCTGAAATGATCAGCCCATGTAGTGTTGGTCACTTGGGCCT
 561 TTCACCTGCCATGGTACCTTTTGTTCCCAGCTCCTCCAGGTGCCAGCCAGCAGGCTTGGTGGTGACAGCAACTGGAACGA
 641 AAGTTCAGTGTTGTTTTAATTTTTATACGTTACTCAAGTTGATTTCTCAGAAAATTGAAAACAGACCTTGTGCTGAGGAC
 721 ACGTCAATAAAAATTATACCTTCCCCTGCCCCAATGTTCATGTGAGTCACAGCATGCAGAGGGGCTGTGCATCCCCCTCA
 801 TTGAAGGCACATTTGATGAGGCTACGCTGCAGATGGGTCATGGTCTGAGCCAGGAGAGAGATAGACACTGTTCCCTGCAC
 881 TCAAGGCAAGTAGGGTGTCAGGAGGAAGAGCAGTAGGGTTTGCAGAGATCCAGGGAAACTTCCTGGAGGAGGCAGCATTT
 961 GAGCCCTATCTAAAGGGAGAATCGGATGTTGATAGGAAGACTGTTTTAAATGAAAATACACTATGATTAAAAACCCAAGA
1041 GAGTGCAGAGGAGTACAAGGCATGCATGTTGGGAAAGGAGGGAATAAGCTAGTCTCTGCAGGAGGCTTCAGAGACCCGTC
1121 TGGGAAGTAGGGCTGAGACTAGGCTTTGGAGGGCCTTGAAGGGCAGCTGAGGGTTGATTTTAATCCTTGGAAATGACCAG
1201 TGCAGATCAAACATGGAGCTCCTGCTGCCCTGGTCCTCAGGAGTCTGGTAACTCAGTCATGTTCTGTAGGTTTGTGCTCC
1281 ATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTGCACAGTAACACAAAAGCTTAAACATGTCAAGCAAGTGGG
1361 GCATTCAGCAGCCACAGAAATGTGTTCATTTTTAGTCCCTAATGGATGTGATTAAGCAGGGCTGATGTGTACAGATTTAA
1441 AAACACACACACGTGCTGGATTAAAAACAGCCACTGGTTTCAGTGCCAGGGCCAGCAAGGCCTACCTGAGCCAGGCGGAA
1521 GCAGCAGCTTGCAAATAGAAACTGCCACCTGCGAGCGCTTCTTGGGTCATGTGCAGCTCCACCTCAGCTGGTCCCTGAGC
1601 CGTGGTCATGTGGGGGTTTTGAAGGGCTAAGTTGAAGCAAGTAATTGCAAAAGAACAGGTGGCACTCTGAGGGCAGGGGA
1681 AGGAGACAGAAGTTTGACTGCGTTTGAAATTATTTCAGTCAGGGAAACATCTGCGTTGTCTTGTTAAGCAGCTTGTAGGC
1761 CCACCCCTGGCTAACTGAACTTTGTGAGCAGTTGGGGCAGTTATTTGAATATTTGTCCAAAGGTGGTAGGGAGGCAGATG
1841 ACATTCTGGGGTTACTGGAGTCCACCTCTGTGCTGATGGGGAAAGTATGGCATGATGAATCCAAAGCAACCAGTAATTCT
1921 TTTTGAAAGTGCAGGCATTTATTTTGAGCTGTATTTCATAGGAGTTTCATTTGGTTTGGTTTTGGTATAGAGAGGTGTCC
2001 ATAGATCTCTATTCCCTTTTTTTTTTTATCGACAAGGCCTACTACGGATAAATCAGTTTTTGTTGCCTGAATACACTTTG
2081 AATTAGACTACAGAAGCCAGTTTGAGCTCAAATTTCACACTTGCTGCAGACAACTCTCAGTGTGGACAGTGCCTTTCTGA
2161 GTAATTAGGATGTTACATGACTTTTTGGTGAAGCCGTATAGGGTAAGGAGATGCCCCAAGGCCCCTGATCATTTCAGAAG
2241 CCACCTGGAGCACCAGAAGGGGTCATCTTCCCAGGGCTATGGCTCTGTGTGCTTAGACAGACATAGTATGGAATTGTGCT
2321 CTAAGCCCACAGGCTTCTCCGGAGTTAAAAGGAAGCAAGAACATCCTTAAGTTACTTTTTCAAAATATGCGCTTCAGGAG
2401 GAACCAGGTTTCCCCAGGAGAGAGAGGCTCCCTGCTCAATCAGCACAGGGAGTTGCTAGCGGGCAGGCTGCCCAGTGCTG
2481 TGGAATCTCCGCCAGCCTCTGGGTTGGGGGCTCCCTCCCACTTCTTGCTTCTTATGGAGTACATGGGACTGCTCTGCTTT
2561 AAGCCGCGATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAGGTGCGTGGGGAGATGCTAGGACATTTGTTG
2641 ATGTCTTTGACCTGTGCTCCGTCTCTGTTGGATGACTGGGTTAGCTAACACCACTAGAGGGAGGTACAGAATGTTAAACA
2721 GTCGTCAGAGTCACACTGAGGGTTGTTTTAACAGAGGGCAAATTCCCAGTTTGTCAAGCATATCTCTGTTAGAGTCCGAA
2801 GTTCATGGTTTTAATGGTTCTAGCTCGTAGCCCTTAATATTTTCAGGATAGCTGGGTCCTGCCAGTGTCCGCTGAGTCCA
2881 TCAGCACAACCAGAAGGTCCAGGGTCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAACC
2961 TTGAGCAGAGGCTGGAGAAGACCTTCAGACAGTCCTTTTACTACCTCACAAAGTGCCATGCCCGGGACCTCAGACCTCAG
3041 GGTTGTGACGTTGTTGATGTTGTCAGGCCCCAGTACGTCTCTAGTGACCGAAGCAGACCTGCCTGAAAGGGCACTCCGGA
3121 CAGTGAGCCCTGGCTCTAACCTGTGCCCTCATATTTCTGCTGCCTCATATGGTCTTGTTTGCCCACTCTGTAGGTGACTG
3201 ATCACCCTAAAAGGGAGGTAGGTATCTAGCAGTAGCACAGTTACTTTGAGCCTGACCACTTGTTCTGAAGTGCAGATGTT
3281 GAAACATGCATTGAGGAAGAACACTTTAAGGAAGCACTTTATGATTTACTCATGGCTGGTGTTGGCCTCAAAGTAAAAGA
3361 ACATCTTAATGCAGAACAGTACAATAAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAAG
3441 GAAAGTGCCTTGTTCTGTGCATCTTCAGAATCCCCCAGGCCCTCTCTTGATCCTTTTCATGAAGTCCAGAGCATTCCTTC
3521 TATTACAGGCTGAAGATGCATTGTAAAAGGTAATGCTATAATAGTATTCCCTCTTCTCAATAAATGTGCAAAACTGGAGA
3601 ATCTGGTGCTGATCTGCAGCATACTTGACAACACAGGGAATACCGTGGATGTTCCACGCCAGCCTTACATCCGTCCCCAT
3681 TGCCTGCCCATGTCCAGTGGCCCTGCGCAACAAAAGTAAGGGCTTGTCTTACCACACTCTCCCCAGCATCTAGCTCAAGG
3761 TAGATGACTGACTGGGAAATTCCGGTTGGATAAAATGGCTTTTCCACATTGCAACTTTGCATCTCTATTAGGAAAATTTA
3841 GATTGAACCTTTCCTCTACTTGATGCTTAGTTTGAGAACAGTTTTCACAACTTTAGAGGGTCTCTCTCAGAGTATGTTAT
3921 ACTGTAACCTTGAAGTTTGAGATGAAACAAGGTGTCAGAGGTTTTGAATCTTTCAAAGGAATTGCCTTTTACAGATTTTT
4001 TTTTTTATTCCCTAAGAAGGGAAAAAGAGAGGGAAGAACTACACTAATGTTAGAGATAAGGTATGTTTTGGCTCAAAATG
4081 TGTCATGAACCTAAAGGTAACTTGATGGGCAGAAATGTCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCT
4161 GTGGGTGGCAGCACTAGATACGGTGGTGGCAGGAGTGTGACATGTAGGCACTCCATGGGGGACAGCTGGACGGTGTCTAT
4241 CAAAAGTGCAAATGCATAAGCTCTTTGAACTAGCAATGCTACTCCTAAGAATTGTACCTGTGTACAAGGTACTTGTGTAC
4321 AAGAGTTTTTGTTGAAACATTGTAATAGCAAAAAGTTGGAGAGTGCCACCAATACAGGGGAATGGTTAAATACATTATGG
4401 CCAGCTTAAACAATGGAATAGTTTGTAGAAATTTAAAACAATGGATCCTGTGTGTGTGTACTACCATAGAATGGGCCCCA
4481 AGATGCATGATTAAGTGAGGAAAAAAGCCCATGGTATCCTAATGTTTGGAATGGAGAAAGTGTGTAGATGTATGTGTGTG
4561 CATATGTTTTCACACAGACGTATACACGTGTATATCATATGTCCACCTGCATATGCCTAGGATGTCTCTGGGAGGATATC
4641 TAGCAGCCCGGCAGCCTGAATTGCCTCTGGGAAGAGGGGTGGGAATGACTTTTCAATGTACACCTTTTGTACCTTTTGAA
4721 TTTTGTACCATGTACATGTATTATCTATTAAAAAATAGTTCTTAATTTTTAATTTGGTATACTTTTCTTAATAGAACCAA
4801 AATGGAAGAAAATTCTGATTCTCTAAATCTGCTTTCTTAAAGATAAAGCCTTTGATTCAAAAGTAAAAAAAAAAAAAAAA
4881 AA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' gauACC--CACCCUGUCUCUCCc 5'
             |||   ||| |:||||||| 
Target 5' gttTGGTTTTGGTATAGAGAGGt 3'
 1974 - 1996 160.00 -17.80
2 
miRNA  3' gauacccacCCUGUCUCUCCc 5'
                   ||| ||||||| 
Target 5' gtttccccaGGAGAGAGAGGc 3'
 2408 - 2428 152.00 -16.40
3 
miRNA  3' gauacCCACCCUGUCUCUCCc 5'
               |||||  |||:|||| 
Target 5' cagcaGGTGGCCCAGGGAGGc 3'
 432 - 452 148.00 -21.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN9075119 5 COSMIC
COSN31603592 8 COSMIC
COSN30463796 12 COSMIC
COSN30116345 33 COSMIC
COSN30166763 36 COSMIC
COSN30140939 47 COSMIC
COSN30463157 47 COSMIC
COSN30167403 63 COSMIC
COSN30458664 66 COSMIC
COSN30160314 108 COSMIC
COSN8265682 138 COSMIC
COSN31583878 267 COSMIC
COSN20143911 280 COSMIC
COSN31488751 311 COSMIC
COSN28729527 330 COSMIC
COSN32055772 621 COSMIC
COSN5780110 638 COSMIC
COSN21595516 745 COSMIC
COSN6675868 1083 COSMIC
COSN20580961 1208 COSMIC
COSN26781524 1389 COSMIC
COSN6675867 1490 COSMIC
COSN20914451 1717 COSMIC
COSN33139 1886 COSMIC
COSN27524768 2016 COSMIC
COSN28922370 2017 COSMIC
COSN26895980 2102 COSMIC
COSN6675866 2176 COSMIC
COSN9856589 2230 COSMIC
COSN20097078 2295 COSMIC
COSN6675865 2341 COSMIC
COSN29712622 2357 COSMIC
COSN25583379 2600 COSMIC
COSN29369868 2699 COSMIC
COSN32062878 2778 COSMIC
COSN26845844 2870 COSMIC
COSN26639204 2900 COSMIC
COSN30544860 3076 COSMIC
COSN6204309 3077 COSMIC
COSN20097074 3198 COSMIC
COSN29996078 3970 COSMIC
COSN20097070 3996 COSMIC
COSN17328118 4018 COSMIC
COSN6675864 4256 COSMIC
COSN22483900 4475 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs35891278 3 dbSNP
rs1246790482 5 dbSNP
rs767801985 8 dbSNP
rs761486062 12 dbSNP
rs374021328 13 dbSNP
rs1218679735 19 dbSNP
rs1320776471 21 dbSNP
rs1237979232 23 dbSNP
rs1290106983 25 dbSNP
rs768152225 26 dbSNP
rs1339786173 28 dbSNP
rs889041396 29 dbSNP
rs1204481267 31 dbSNP
rs1348836723 36 dbSNP
rs1296867885 39 dbSNP
rs746573138 42 dbSNP
rs1363912530 44 dbSNP
rs774992107 45 dbSNP
rs199803106 47 dbSNP
rs762393151 48 dbSNP
rs778154879 50 dbSNP
rs756470025 51 dbSNP
rs996883732 52 dbSNP
rs1183176280 53 dbSNP
rs1235084973 54 dbSNP
rs41279760 54 dbSNP
rs1346259033 55 dbSNP
rs903927294 57 dbSNP
rs1255985975 60 dbSNP
rs551845085 62 dbSNP
rs945470252 66 dbSNP
rs3832171 78 dbSNP
rs397840710 78 dbSNP
rs1166265269 80 dbSNP
rs892605764 85 dbSNP
rs190109769 86 dbSNP
rs1330892661 89 dbSNP
rs1329244784 91 dbSNP
rs1374958917 94 dbSNP
rs1338713053 95 dbSNP
rs1396732379 96 dbSNP
rs1371764872 97 dbSNP
rs1049377051 99 dbSNP
rs939579730 100 dbSNP
rs932328187 101 dbSNP
rs17569222 106 dbSNP
rs1464340258 111 dbSNP
rs867546304 118 dbSNP
rs1198731018 122 dbSNP
rs934431406 123 dbSNP
rs1455150651 124 dbSNP
rs930338983 125 dbSNP
rs774815772 128 dbSNP
rs978927240 144 dbSNP
rs1462341190 152 dbSNP
rs920325188 153 dbSNP
rs1169406370 157 dbSNP
rs547522619 164 dbSNP
rs1404722839 170 dbSNP
rs1395324908 173 dbSNP
rs962111305 182 dbSNP
rs41279758 189 dbSNP
rs529099035 197 dbSNP
rs916160482 198 dbSNP
rs991480018 207 dbSNP
rs1442561354 212 dbSNP
rs1018743437 216 dbSNP
rs1213633998 217 dbSNP
rs1274340405 220 dbSNP
rs561983022 222 dbSNP
rs1469471735 229 dbSNP
rs1206248941 234 dbSNP
rs1256033433 238 dbSNP
rs1247081686 242 dbSNP
rs1428769232 243 dbSNP
rs771397404 246 dbSNP
rs962106719 249 dbSNP
rs953268520 253 dbSNP
rs1489574469 254 dbSNP
rs1463127197 255 dbSNP
rs1287103910 256 dbSNP
rs1384298457 257 dbSNP
rs1239891737 264 dbSNP
rs1351763493 266 dbSNP
rs144544594 267 dbSNP
rs1339138703 268 dbSNP
rs1233052809 270 dbSNP
rs1294483679 270 dbSNP
rs996833079 272 dbSNP
rs903830869 274 dbSNP
rs1022729907 283 dbSNP
rs13391510 286 dbSNP
rs545925895 287 dbSNP
rs996804548 292 dbSNP
rs1332303170 295 dbSNP
rs1441693044 297 dbSNP
rs868533534 300 dbSNP
rs1188368964 307 dbSNP
rs1419702767 311 dbSNP
rs892546563 311 dbSNP
rs1362384658 312 dbSNP
rs139493204 316 dbSNP
rs1363316653 328 dbSNP
rs1454363542 333 dbSNP
rs545436080 337 dbSNP
rs1160582659 342 dbSNP
rs1400296694 345 dbSNP
rs934358225 346 dbSNP
rs939546335 349 dbSNP
rs1313892451 351 dbSNP
rs924364404 352 dbSNP
rs1043217422 353 dbSNP
rs770371336 354 dbSNP
rs1306837724 355 dbSNP
rs1045311605 364 dbSNP
rs779446923 369 dbSNP
rs1240552204 377 dbSNP
rs1378095023 378 dbSNP
rs1253934226 386 dbSNP
rs947552946 388 dbSNP
rs747719779 394 dbSNP
rs1164676233 399 dbSNP
rs1162463971 400 dbSNP
rs1481918713 416 dbSNP
rs780531118 419 dbSNP
rs1367337637 421 dbSNP
rs1251151001 423 dbSNP
rs1419788966 426 dbSNP
rs920228902 431 dbSNP
rs768397475 435 dbSNP
rs1264600026 438 dbSNP
rs373311998 442 dbSNP
rs928589899 445 dbSNP
rs571770166 447 dbSNP
rs575377944 448 dbSNP
rs368909036 451 dbSNP
rs1374645878 453 dbSNP
rs779958148 458 dbSNP
rs13391379 461 dbSNP
rs1282436864 468 dbSNP
rs569407830 471 dbSNP
rs867819124 472 dbSNP
rs1220561800 484 dbSNP
rs750151588 486 dbSNP
rs1342281135 489 dbSNP
rs1278843201 491 dbSNP
rs1481588427 492 dbSNP
rs552871300 493 dbSNP
rs978645504 495 dbSNP
rs1028191483 500 dbSNP
rs535181225 500 dbSNP
rs1397109186 502 dbSNP
rs574134422 506 dbSNP
rs1343267236 508 dbSNP
rs778834524 514 dbSNP
rs1463985811 515 dbSNP
rs892541949 518 dbSNP
rs1393174413 528 dbSNP
rs1035541032 529 dbSNP
rs1305230905 533 dbSNP
rs555954023 534 dbSNP
rs757136366 540 dbSNP
rs867939370 556 dbSNP
rs1389580022 561 dbSNP
rs1296064516 563 dbSNP
rs1308966794 570 dbSNP
rs537735943 571 dbSNP
rs371258849 575 dbSNP
rs1468143252 581 dbSNP
rs13417407 583 dbSNP
rs1214361392 584 dbSNP
rs1255178193 587 dbSNP
rs1485036003 588 dbSNP
rs1186084872 597 dbSNP
rs1478553410 600 dbSNP
rs1430652802 605 dbSNP
rs995013246 607 dbSNP
rs899454860 612 dbSNP
rs1042807688 615 dbSNP
rs570402092 622 dbSNP
rs1429594303 632 dbSNP
rs916054146 638 dbSNP
rs752851642 639 dbSNP
rs938901129 644 dbSNP
rs972016703 648 dbSNP
rs1275136488 652 dbSNP
rs3832170 655 dbSNP
rs1445298636 656 dbSNP
rs1036020852 659 dbSNP
rs147964639 663 dbSNP
rs909246705 666 dbSNP
rs543942144 668 dbSNP
rs1257196693 669 dbSNP
rs551759157 672 dbSNP
rs1028535202 681 dbSNP
rs1405179268 682 dbSNP
rs1399601468 684 dbSNP
rs1318747087 692 dbSNP
rs1346562906 695 dbSNP
rs1258608698 697 dbSNP
rs975280444 703 dbSNP
rs1217886288 706 dbSNP
rs1359784737 707 dbSNP
rs1355784252 708 dbSNP
rs965644103 713 dbSNP
rs1286368924 720 dbSNP
rs185347032 722 dbSNP
rs1051929863 723 dbSNP
rs931732182 726 dbSNP
rs1208949131 727 dbSNP
rs1280069466 735 dbSNP
rs1486169041 736 dbSNP
rs902835389 740 dbSNP
rs182027884 754 dbSNP
rs142321129 755 dbSNP
rs1330140315 762 dbSNP
rs1323525163 771 dbSNP
rs1347838134 776 dbSNP
rs529423984 777 dbSNP
rs1409466751 780 dbSNP
rs1432488230 781 dbSNP
rs1011705296 784 dbSNP
rs76888329 787 dbSNP
rs1436352819 791 dbSNP
rs767461310 795 dbSNP
rs1326821503 800 dbSNP
rs913172264 807 dbSNP
rs1408650647 808 dbSNP
rs532563154 810 dbSNP
rs1280243781 811 dbSNP
rs1375538050 818 dbSNP
rs759548140 824 dbSNP
rs759848757 825 dbSNP
rs116584056 826 dbSNP
rs1003551013 833 dbSNP
rs1245171787 839 dbSNP
rs1213425384 847 dbSNP
rs531495451 850 dbSNP
rs969450147 858 dbSNP
rs1023758456 862 dbSNP
rs995003360 864 dbSNP
rs560228062 866 dbSNP
rs1251662422 867 dbSNP
rs899402184 871 dbSNP
rs940981139 872 dbSNP
rs1237571867 897 dbSNP
rs1395282070 904 dbSNP
rs1455460470 914 dbSNP
rs1165962634 915 dbSNP
rs137871133 920 dbSNP
rs866159306 923 dbSNP
rs545349415 926 dbSNP
rs1196844919 940 dbSNP
rs770139545 941 dbSNP
rs1037045288 943 dbSNP
rs1005152902 944 dbSNP
rs1183547005 944 dbSNP
rs909215439 946 dbSNP
rs1280732871 954 dbSNP
rs984758099 965 dbSNP
rs890089332 966 dbSNP
rs932024514 970 dbSNP
rs1371968193 975 dbSNP
rs571733409 979 dbSNP
rs766912600 983 dbSNP
rs146192571 984 dbSNP
rs1215733057 986 dbSNP
rs1275723852 998 dbSNP
rs1019486152 1007 dbSNP
rs1330026478 1009 dbSNP
rs1042903642 1012 dbSNP
rs947235278 1018 dbSNP
rs1253028318 1019 dbSNP
rs1469562579 1020 dbSNP
rs1190496176 1022 dbSNP
rs1372300858 1025 dbSNP
rs1361405333 1032 dbSNP
rs1177477759 1036 dbSNP
rs541536226 1038 dbSNP
rs977326458 1039 dbSNP
rs1459983983 1041 dbSNP
rs1325324235 1045 dbSNP
rs1395255503 1047 dbSNP
rs1388744603 1050 dbSNP
rs574520284 1053 dbSNP
rs1316480167 1054 dbSNP
rs913128368 1056 dbSNP
rs989108964 1067 dbSNP
rs540251615 1068 dbSNP
rs1021268708 1071 dbSNP
rs1011257040 1077 dbSNP
rs1233168022 1080 dbSNP
rs1863040 1083 dbSNP
rs1357782393 1084 dbSNP
rs1379978621 1089 dbSNP
rs982118762 1090 dbSNP
rs969440294 1091 dbSNP
rs1023704431 1094 dbSNP
rs1176851149 1096 dbSNP
rs1484298944 1099 dbSNP
rs994947763 1103 dbSNP
rs1447403832 1113 dbSNP
rs1239104395 1115 dbSNP
rs372154836 1117 dbSNP
rs576762193 1118 dbSNP
rs1005510282 1119 dbSNP
rs558508746 1125 dbSNP
rs1418744276 1130 dbSNP
rs773665966 1138 dbSNP
rs557019998 1141 dbSNP
rs890715687 1151 dbSNP
rs1221091288 1160 dbSNP
rs907373218 1162 dbSNP
rs1029999155 1165 dbSNP
rs770457484 1171 dbSNP
rs940906963 1172 dbSNP
rs539808689 1178 dbSNP
rs762197915 1179 dbSNP
rs1353884124 1182 dbSNP
rs888037288 1185 dbSNP
rs947173076 1186 dbSNP
rs1236214257 1189 dbSNP
rs1049022002 1196 dbSNP
rs1259832812 1197 dbSNP
rs776255204 1198 dbSNP
rs1353960951 1200 dbSNP
rs932018992 1203 dbSNP
rs768040099 1210 dbSNP
rs1485187828 1221 dbSNP
rs1188658719 1222 dbSNP
rs1052962239 1228 dbSNP
rs938597259 1229 dbSNP
rs1425689993 1230 dbSNP
rs1179781140 1240 dbSNP
rs1380773982 1245 dbSNP
rs1454507034 1252 dbSNP
rs565921013 1253 dbSNP
rs944818619 1254 dbSNP
rs1374185631 1256 dbSNP
rs928592628 1256 dbSNP
rs1314065648 1260 dbSNP
rs1434481904 1260 dbSNP
rs376955401 1261 dbSNP
rs535576762 1263 dbSNP
rs7562494 1264 dbSNP
rs1157255635 1267 dbSNP
rs1300802855 1274 dbSNP
rs745685286 1276 dbSNP
rs1346937336 1293 dbSNP
rs778638276 1295 dbSNP
rs1425799818 1298 dbSNP
rs1257494744 1302 dbSNP
rs1479635759 1305 dbSNP
rs1195087852 1310 dbSNP
rs549526385 1317 dbSNP
rs973431570 1319 dbSNP
rs1440383965 1321 dbSNP
rs1180818141 1323 dbSNP
rs1393466569 1325 dbSNP
rs1454146800 1329 dbSNP
rs1174680818 1330 dbSNP
rs1361218009 1341 dbSNP
rs1460918293 1349 dbSNP
rs1298046503 1351 dbSNP
rs528842454 1358 dbSNP
rs963502975 1359 dbSNP
rs1396661491 1360 dbSNP
rs1448315100 1361 dbSNP
rs1323541440 1368 dbSNP
rs1414571919 1372 dbSNP
rs1234525703 1386 dbSNP
rs1303141814 1387 dbSNP
rs1015466471 1389 dbSNP
rs1222105409 1391 dbSNP
rs1305493610 1392 dbSNP
rs967261667 1397 dbSNP
rs914512908 1402 dbSNP
rs531408314 1406 dbSNP
rs1474808351 1408 dbSNP
rs1200580336 1427 dbSNP
rs955120340 1429 dbSNP
rs139041141 1430 dbSNP
rs1034466032 1432 dbSNP
rs1427092673 1437 dbSNP
rs995821821 1438 dbSNP
rs1488519512 1442 dbSNP
rs1284840344 1444 dbSNP
rs967460836 1446 dbSNP
rs1213152918 1448 dbSNP
rs1467602849 1448 dbSNP
rs1393012601 1449 dbSNP
rs1441197663 1450 dbSNP
rs190112696 1452 dbSNP
rs1002623855 1453 dbSNP
rs185196174 1453 dbSNP
rs751069814 1453 dbSNP
rs1227297374 1459 dbSNP
rs200945223 1467 dbSNP
rs150640904 1468 dbSNP
rs376050942 1469 dbSNP
rs559888604 1484 dbSNP
rs1248665457 1486 dbSNP
rs1011706898 1487 dbSNP
rs11556267 1490 dbSNP
rs369755910 1492 dbSNP
rs1049298444 1500 dbSNP
rs1264303140 1501 dbSNP
rs769609338 1506 dbSNP
rs1400966209 1512 dbSNP
rs781387719 1514 dbSNP
rs1479093896 1516 dbSNP
rs1360230005 1517 dbSNP
rs755003690 1530 dbSNP
rs1287515876 1532 dbSNP
rs72834377 1534 dbSNP
rs948653302 1536 dbSNP
rs1452540668 1545 dbSNP
rs1458066184 1548 dbSNP
rs944731596 1549 dbSNP
rs924037424 1552 dbSNP
rs1374163196 1554 dbSNP
rs1412870597 1556 dbSNP
rs1350703537 1557 dbSNP
rs1164158814 1569 dbSNP
rs761655139 1570 dbSNP
rs1415546401 1575 dbSNP
rs1195821189 1578 dbSNP
rs544003034 1579 dbSNP
rs1354973329 1580 dbSNP
rs1292059850 1583 dbSNP
rs780986321 1583 dbSNP
rs576725319 1585 dbSNP
rs754680157 1589 dbSNP
rs1184566283 1599 dbSNP
rs973430190 1601 dbSNP
rs376483394 1602 dbSNP
rs907986433 1605 dbSNP
rs1472867869 1608 dbSNP
rs914438574 1609 dbSNP
rs1405111959 1610 dbSNP
rs990076253 1614 dbSNP
rs958912696 1616 dbSNP
rs1332094382 1617 dbSNP
rs1362280704 1617 dbSNP
rs984012294 1628 dbSNP
rs149194221 1632 dbSNP
rs1219738135 1643 dbSNP
rs1030520957 1649 dbSNP
rs1340453701 1652 dbSNP
rs974961100 1661 dbSNP
rs964964916 1665 dbSNP
rs1359697275 1667 dbSNP
rs182324417 1671 dbSNP
rs866536621 1672 dbSNP
rs553873113 1673 dbSNP
rs1371207872 1677 dbSNP
rs1223491226 1687 dbSNP
rs1011276854 1689 dbSNP
rs1388950485 1694 dbSNP
rs1014644294 1701 dbSNP
rs955971942 1702 dbSNP
rs1279997971 1707 dbSNP
rs1443529197 1713 dbSNP
rs1212774193 1718 dbSNP
rs1230692250 1723 dbSNP
rs35830332 1725 dbSNP
rs1031445754 1733 dbSNP
rs750859596 1734 dbSNP
rs138190549 1735 dbSNP
rs779634855 1738 dbSNP
rs765678166 1742 dbSNP
rs189425397 1743 dbSNP
rs1012748348 1747 dbSNP
rs757660984 1753 dbSNP
rs898456701 1761 dbSNP
rs868053291 1766 dbSNP
rs556262970 1767 dbSNP
rs183824238 1769 dbSNP
rs1028270320 1784 dbSNP
rs1425527813 1796 dbSNP
rs1416120212 1797 dbSNP
rs1326753583 1798 dbSNP
rs1352904970 1800 dbSNP
rs6755016 1808 dbSNP
rs1171515105 1809 dbSNP
rs1379420012 1811 dbSNP
rs900752141 1813 dbSNP
rs907933637 1815 dbSNP
rs1047784252 1819 dbSNP
rs933404616 1825 dbSNP
rs1221486140 1833 dbSNP
rs1271495235 1837 dbSNP
rs1040349148 1839 dbSNP
rs1198698258 1851 dbSNP
rs1466018537 1852 dbSNP
rs375884144 1853 dbSNP
rs1008923589 1865 dbSNP
rs1168054458 1867 dbSNP
rs923399296 1869 dbSNP
rs974908824 1870 dbSNP
rs1434728404 1871 dbSNP
rs553716293 1871 dbSNP
rs964951780 1877 dbSNP
rs1192554626 1880 dbSNP
rs914857960 1885 dbSNP
rs1478886794 1886 dbSNP
rs990204949 1904 dbSNP
rs1418683324 1910 dbSNP
rs955709250 1912 dbSNP
rs1031768889 1919 dbSNP
rs1402462681 1925 dbSNP
rs946818567 1935 dbSNP
rs1323122947 1937 dbSNP
rs1332105311 1941 dbSNP
rs868766082 1941 dbSNP
rs1439014282 1942 dbSNP
rs892969166 1946 dbSNP
rs1317873465 1951 dbSNP
rs764596078 1957 dbSNP
rs551998276 1958 dbSNP
rs760115740 1964 dbSNP
rs533952180 1966 dbSNP
rs1313207783 1970 dbSNP
rs1453165813 1979 dbSNP
rs898402968 1985 dbSNP
rs17047521 2008 dbSNP
rs1241261349 2011 dbSNP
rs1478107862 2012 dbSNP
rs547827192 2015 dbSNP
rs1232317542 2016 dbSNP
rs949702560 2017 dbSNP
rs529714582 2020 dbSNP
rs1379403481 2023 dbSNP
rs1332057733 2027 dbSNP
rs1340230065 2028 dbSNP
rs536201837 2028 dbSNP
rs983154551 2028 dbSNP
rs951836947 2029 dbSNP
rs1395644497 2030 dbSNP
rs1296431661 2031 dbSNP
rs1467543014 2032 dbSNP
rs1243409294 2039 dbSNP
rs1377944835 2043 dbSNP
rs1265469421 2044 dbSNP
rs562534797 2045 dbSNP
rs1048200588 2046 dbSNP
rs964968969 2053 dbSNP
rs879176489 2056 dbSNP
rs933352190 2057 dbSNP
rs1019599277 2071 dbSNP
rs923384803 2079 dbSNP
rs1218782824 2081 dbSNP
rs1009183868 2085 dbSNP
rs1474294717 2100 dbSNP
rs1186957631 2103 dbSNP
rs1039207855 2109 dbSNP
rs1021006847 2111 dbSNP
rs568168887 2112 dbSNP
rs745487888 2114 dbSNP
rs1157032801 2117 dbSNP
rs1360365897 2124 dbSNP
rs914743699 2124 dbSNP
rs990391713 2125 dbSNP
rs1436764686 2131 dbSNP
rs1010957020 2132 dbSNP
rs934918269 2133 dbSNP
rs1268924415 2138 dbSNP
rs1054266792 2140 dbSNP
rs1236499424 2140 dbSNP
rs1308065522 2141 dbSNP
rs1354200108 2148 dbSNP
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rs924263431 2152 dbSNP
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rs1356109338 2168 dbSNP
rs201626523 2169 dbSNP
rs11123466 2176 dbSNP
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rs1314978370 2193 dbSNP
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rs950002840 2196 dbSNP
rs1389139818 2214 dbSNP
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rs1301000005 2223 dbSNP
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rs1022696414 2241 dbSNP
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rs564660386 2248 dbSNP
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rs200043766 2300 dbSNP
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rs767670483 2316 dbSNP
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rs1026310660 2323 dbSNP
rs1257504118 2332 dbSNP
rs1209136060 2333 dbSNP
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rs1303079039 2336 dbSNP
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rs12711888 2341 dbSNP
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rs1356003389 2398 dbSNP
rs958123596 2400 dbSNP
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rs886363595 2503 dbSNP
rs1186364357 2511 dbSNP
rs766452837 2515 dbSNP
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rs76727392 2535 dbSNP
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rs998121828 2540 dbSNP
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rs191244703 2565 dbSNP
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rs1208572413 2602 dbSNP
rs1236450516 2605 dbSNP
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rs1356282814 2649 dbSNP
rs1218053037 2658 dbSNP
rs532241978 2660 dbSNP
rs1211642301 2661 dbSNP
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rs886299616 2670 dbSNP
rs751245171 2683 dbSNP
rs963962150 2690 dbSNP
rs1239837665 2701 dbSNP
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rs1425038924 2716 dbSNP
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rs1199795506 2728 dbSNP
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rs957462513 2773 dbSNP
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rs879165444 2792 dbSNP
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rs560592990 2820 dbSNP
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rs562542477 2871 dbSNP
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rs995125381 2894 dbSNP
rs1458305514 2905 dbSNP
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rs72834376 2915 dbSNP
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rs768372276 2960 dbSNP
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rs1241651833 2990 dbSNP
rs533721084 2992 dbSNP
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rs957575172 3021 dbSNP
rs1380015591 3023 dbSNP
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rs72533705 3200 dbSNP
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rs1486545176 3410 dbSNP
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rs368343748 3420 dbSNP
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rs1006179131 3504 dbSNP
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rs1441967629 3652 dbSNP
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rs1253635753 3668 dbSNP
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rs954612376 3676 dbSNP
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rs1053627135 3690 dbSNP
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rs61732299 3706 dbSNP
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rs1293914543 3721 dbSNP
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rs1329990865 3726 dbSNP
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rs1392166533 3761 dbSNP
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rs1299870548 3773 dbSNP
rs534716286 3774 dbSNP
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rs1220805072 3783 dbSNP
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rs1168074875 3796 dbSNP
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rs1431063086 3857 dbSNP
rs900808607 3864 dbSNP
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rs1353760846 3881 dbSNP
rs756630175 3884 dbSNP
rs1252077283 3892 dbSNP
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rs1249919827 3906 dbSNP
rs889582767 3908 dbSNP
rs886332171 3909 dbSNP
rs569181838 3914 dbSNP
rs185006418 3920 dbSNP
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rs902409185 3933 dbSNP
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rs1386192372 3965 dbSNP
rs183116819 3974 dbSNP
rs956384086 3985 dbSNP
rs200712703 4006 dbSNP
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rs1237926396 4022 dbSNP
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rs75855108 4311 dbSNP
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rs969142125 4345 dbSNP
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rs1186319682 4369 dbSNP
rs567321866 4372 dbSNP
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rs896391427 4626 dbSNP
rs1052708714 4630 dbSNP
rs571850215 4644 dbSNP
rs1033535558 4647 dbSNP
rs1002546127 4649 dbSNP
rs546932209 4650 dbSNP
rs1323831121 4652 dbSNP
rs189484411 4661 dbSNP
rs1327340196 4663 dbSNP
rs1462373922 4679 dbSNP
rs186349283 4683 dbSNP
rs1489828203 4692 dbSNP
rs947698543 4692 dbSNP
rs1197377739 4695 dbSNP
rs561417602 4696 dbSNP
rs1476619078 4697 dbSNP
rs1374012760 4698 dbSNP
rs1192693034 4701 dbSNP
rs916282455 4702 dbSNP
rs180930914 4704 dbSNP
rs1214458449 4705 dbSNP
rs1372948351 4707 dbSNP
rs1468857459 4714 dbSNP
rs1025732862 4718 dbSNP
rs1302051851 4718 dbSNP
rs188419263 4720 dbSNP
rs897275858 4728 dbSNP
rs1268023433 4729 dbSNP
rs761861279 4732 dbSNP
rs1037189235 4735 dbSNP
rs944209643 4738 dbSNP
rs962966569 4743 dbSNP
rs1017583834 4749 dbSNP
rs776525259 4749 dbSNP
rs1357262265 4750 dbSNP
rs563460755 4753 dbSNP
rs1005851 4755 dbSNP
rs889782674 4756 dbSNP
rs1029672743 4761 dbSNP
rs1201024563 4762 dbSNP
rs1270586749 4770 dbSNP
rs577830614 4772 dbSNP
rs1187488895 4773 dbSNP
rs1392405143 4775 dbSNP
rs1423376198 4781 dbSNP
rs1163474990 4785 dbSNP
rs998238917 4793 dbSNP
rs559405174 4803 dbSNP
rs891900723 4816 dbSNP
rs1325495384 4818 dbSNP
rs1226159113 4820 dbSNP
rs1430993835 4821 dbSNP
rs751074084 4825 dbSNP
rs1304981033 4837 dbSNP
rs1380266884 4849 dbSNP
rs935141015 4851 dbSNP
rs1292432905 4854 dbSNP
rs932899669 4862 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084065. RNA binding protein: AGO2. Condition:CLIP_emetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' gauacccaCCC--UGUCUCUCCc 5'
                  |||  | ||||||| 
Target 5' ------aaGGGAAAAAGAGAGGg 3'
 		1 - 17
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084065
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_emetine_AbnovaAb
Location of target site ENST00000376300.2 | 3UTR | AAGGGAAAAAGAGAGGGAAGAACU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
209 hsa-miR-6769b-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT181753 UHMK1 U2AF homology motif kinase 1 2 2
MIRT287119 SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 2 2
MIRT395372 CDC42EP4 CDC42 effector protein 4 2 4
MIRT472533 NACC1 nucleus accumbens associated 1 2 4
MIRT472611 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 2 2
MIRT482405 ADRB1 adrenoceptor beta 1 2 10
MIRT492330 SETD1B SET domain containing 1B 2 2
MIRT499238 VAV3 vav guanine nucleotide exchange factor 3 2 6
MIRT512274 ARHGDIA Rho GDP dissociation inhibitor alpha 2 6
MIRT534548 RUNX1 runt related transcription factor 1 2 2
MIRT535374 PEX5L peroxisomal biogenesis factor 5 like 2 2
MIRT535424 PDZD8 PDZ domain containing 8 2 2
MIRT539329 AHSA2 activator of HSP90 ATPase homolog 2 2 4
MIRT569350 EFHC1 EF-hand domain containing 1 2 2
MIRT576116 Klf6 Kruppel-like factor 6 2 2
MIRT607241 LINS lines homolog 1 2 4
MIRT607364 ASAH2 N-acylsphingosine amidohydrolase 2 2 4
MIRT609572 CATSPER4 cation channel sperm associated 4 2 2
MIRT610045 SERPINA3 serpin family A member 3 2 2
MIRT610284 PLCXD3 phosphatidylinositol specific phospholipase C X domain containing 3 2 2
MIRT610302 KLHL21 kelch like family member 21 2 2
MIRT610393 FOXE1 forkhead box E1 2 2
MIRT610432 ASAH2B N-acylsphingosine amidohydrolase 2B 2 2
MIRT610510 BARHL2 BarH like homeobox 2 2 2
MIRT611818 FCRL4 Fc receptor like 4 2 2
MIRT612755 MYOCD myocardin 2 2
MIRT613698 QPRT quinolinate phosphoribosyltransferase 2 2
MIRT613917 POU3F1 POU class 3 homeobox 1 2 2
MIRT615153 URGCP-MRPS24 URGCP-MRPS24 readthrough 2 2
MIRT615201 CLUAP1 clusterin associated protein 1 2 2
MIRT615338 ABCC12 ATP binding cassette subfamily C member 12 2 2
MIRT616706 UBXN2A UBX domain protein 2A 2 2
MIRT617186 GOSR2 golgi SNAP receptor complex member 2 2 4
MIRT617526 SORCS2 sortilin related VPS10 domain containing receptor 2 2 2
MIRT617596 NUDT5 nudix hydrolase 5 2 4
MIRT617763 C17orf105 chromosome 17 open reading frame 105 2 2
MIRT618613 SHOX short stature homeobox 2 2
MIRT619301 FAM26E calcium homeostasis modulator family member 5 2 2
MIRT619515 TXLNB taxilin beta 2 2
MIRT619925 NLRP9 NLR family pyrin domain containing 9 2 2
MIRT619942 C8orf33 chromosome 8 open reading frame 33 2 2
MIRT620025 NFAM1 NFAT activating protein with ITAM motif 1 2 2
MIRT620554 C10orf10 chromosome 10 open reading frame 10 2 4
MIRT620752 CCR5 C-C motif chemokine receptor 5 (gene/pseudogene) 2 2
MIRT621798 TMEM233 transmembrane protein 233 2 2
MIRT621843 TGFBR3 transforming growth factor beta receptor 3 2 2
MIRT622693 PLSCR1 phospholipid scramblase 1 2 2
MIRT622733 PITPNM3 PITPNM family member 3 2 2
MIRT623004 ONECUT3 one cut homeobox 3 2 2
MIRT623211 MTFR1L mitochondrial fission regulator 1 like 2 2
MIRT623771 GPR37L1 G protein-coupled receptor 37 like 1 2 2
MIRT624119 DNAH10OS dynein axonemal heavy chain 10 opposite strand 2 2
MIRT624150 DIAPH1 diaphanous related formin 1 2 2
MIRT624443 CAMK2N1 calcium/calmodulin dependent protein kinase II inhibitor 1 2 2
MIRT624855 ABI2 abl interactor 2 2 2
MIRT625311 SHISA6 shisa family member 6 2 2
MIRT625741 MTSS1 MTSS1, I-BAR domain containing 2 2
MIRT626292 ZNF85 zinc finger protein 85 2 2
MIRT627400 TMEM170A transmembrane protein 170A 2 2
MIRT627464 SYNRG synergin gamma 2 2
MIRT627913 KANSL1 KAT8 regulatory NSL complex subunit 1 2 2
MIRT636508 GDAP1L1 ganglioside induced differentiation associated protein 1 like 1 2 2
MIRT636910 KIAA0408 KIAA0408 2 2
MIRT637302 ACTN2 actinin alpha 2 2 2
MIRT638230 SOGA3 SOGA family member 3 2 2
MIRT639880 STC1 stanniocalcin 1 2 2
MIRT639999 PHF21B PHD finger protein 21B 2 2
MIRT640149 CEP104 centrosomal protein 104 2 2
MIRT640699 SKI SKI proto-oncogene 2 2
MIRT640911 RAB13 RAB13, member RAS oncogene family 2 2
MIRT641518 CREBBP CREB binding protein 2 2
MIRT641990 OXSR1 oxidative stress responsive 1 2 2
MIRT642635 EPPIN epididymal peptidase inhibitor 2 2
MIRT642744 TDRD6 tudor domain containing 6 2 2
MIRT642759 SDHAF2 succinate dehydrogenase complex assembly factor 2 2 2
MIRT642787 CHCHD3 coiled-coil-helix-coiled-coil-helix domain containing 3 2 2
MIRT643054 EPPIN-WFDC6 EPPIN-WFDC6 readthrough 2 2
MIRT643104 NDUFB5 NADH:ubiquinone oxidoreductase subunit B5 2 2
MIRT643316 TMEM151B transmembrane protein 151B 2 2
MIRT643715 ITK IL2 inducible T-cell kinase 2 2
MIRT644087 A4GALT alpha 1,4-galactosyltransferase (P blood group) 2 2
MIRT644112 SEL1L3 SEL1L family member 3 2 2
MIRT644377 ZNF286A zinc finger protein 286A 2 2
MIRT644408 FRMD6 FERM domain containing 6 2 2
MIRT644684 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT644744 CCDC174 coiled-coil domain containing 174 2 2
MIRT644876 C2orf48 chromosome 2 open reading frame 48 2 2
MIRT645417 FAM110A family with sequence similarity 110 member A 2 2
MIRT645928 PLXNA3 plexin A3 2 2
MIRT646181 PTPN14 protein tyrosine phosphatase, non-receptor type 14 2 2
MIRT646554 TMCC2 transmembrane and coiled-coil domain family 2 2 2
MIRT647235 OR6A2 olfactory receptor family 6 subfamily A member 2 2 2
MIRT647263 PTGDR2 prostaglandin D2 receptor 2 2 2
MIRT647660 FOXL1 forkhead box L1 2 2
MIRT648284 TRAPPC2L trafficking protein particle complex 2 like 2 2
MIRT648493 CMBL carboxymethylenebutenolidase homolog 2 2
MIRT648963 TMEM45B transmembrane protein 45B 2 2
MIRT649511 RAB17 RAB17, member RAS oncogene family 2 2
MIRT650446 CPXM2 carboxypeptidase X, M14 family member 2 2 2
MIRT650712 KRT32 keratin 32 2 2
MIRT651069 ZNF518B zinc finger protein 518B 2 4
MIRT651090 ZNF516 zinc finger protein 516 2 2
MIRT651193 ZNF281 zinc finger protein 281 2 2
MIRT651330 ZCCHC2 zinc finger CCHC-type containing 2 2 2
MIRT651445 XKR4 XK related 4 2 2
MIRT651517 WNT4 Wnt family member 4 2 4
MIRT651694 VPS13D vacuolar protein sorting 13 homolog D 2 2
MIRT652173 TRIM66 tripartite motif containing 66 2 2
MIRT652432 TMEM239 transmembrane protein 239 2 2
MIRT652656 TIMM10 translocase of inner mitochondrial membrane 10 2 2
MIRT652707 THBS2 thrombospondin 2 2 2
MIRT652812 TBL2 transducin beta like 2 2 2
MIRT653350 SMG7 SMG7, nonsense mediated mRNA decay factor 2 2
MIRT653471 SLC4A1 solute carrier family 4 member 1 (Diego blood group) 2 2
MIRT653658 SLC27A4 solute carrier family 27 member 4 2 2
MIRT654691 PSMB5 proteasome subunit beta 5 2 2
MIRT654735 PRLR prolactin receptor 2 2
MIRT654931 POLR3D RNA polymerase III subunit D 2 2
MIRT655209 PHAX phosphorylated adaptor for RNA export 2 2
MIRT655346 PCP4L1 Purkinje cell protein 4 like 1 2 2
MIRT655404 PANK1 pantothenate kinase 1 2 2
MIRT655482 PAK3 p21 (RAC1) activated kinase 3 2 2
MIRT655964 NDNF neuron derived neurotrophic factor 2 2
MIRT656017 MYPN myopalladin 2 2
MIRT656491 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 2
MIRT657151 ITGA1 integrin subunit alpha 1 2 2
MIRT657411 HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 2 2
MIRT657608 GRID1 glutamate ionotropic receptor delta type subunit 1 2 2
MIRT658181 FBXO9 F-box protein 9 2 2
MIRT658932 DPY19L1 dpy-19 like C-mannosyltransferase 1 2 2
MIRT659028 DHTKD1 dehydrogenase E1 and transketolase domain containing 1 2 2
MIRT659092 DENR density regulated re-initiation and release factor 2 2
MIRT659204 CYBB cytochrome b-245 beta chain 2 2
MIRT659718 CCDC93 coiled-coil domain containing 93 2 2
MIRT660185 BNC2 basonuclin 2 2 2
MIRT660805 AIFM2 apoptosis inducing factor, mitochondria associated 2 2 2
MIRT660900 ADCY6 adenylate cyclase 6 2 2
MIRT660925 ADAM19 ADAM metallopeptidase domain 19 2 2
MIRT661741 DTHD1 death domain containing 1 2 2
MIRT661998 EFTUD2 elongation factor Tu GTP binding domain containing 2 2 2
MIRT662639 PKHD1L1 PKHD1 like 1 2 2
MIRT664338 RAB8A RAB8A, member RAS oncogene family 2 2
MIRT666743 RALY RALY heterogeneous nuclear ribonucleoprotein 2 2
MIRT667070 PANK3 pantothenate kinase 3 2 2
MIRT667925 IGLON5 IgLON family member 5 2 2
MIRT668488 ETV3 ETS variant 3 2 2
MIRT668610 EHD4 EH domain containing 4 2 2
MIRT669419 ATP9A ATPase phospholipid transporting 9A (putative) 2 2
MIRT669652 ACSBG1 acyl-CoA synthetase bubblegum family member 1 2 2
MIRT674005 KCNN3 potassium calcium-activated channel subfamily N member 3 2 2
MIRT680447 SLCO5A1 solute carrier organic anion transporter family member 5A1 2 2
MIRT684326 GTF3C4 general transcription factor IIIC subunit 4 2 2
MIRT685625 C12orf49 chromosome 12 open reading frame 49 2 2
MIRT689978 ZNF185 zinc finger protein 185 with LIM domain 2 2
MIRT693962 HNRNPA1L2 heterogeneous nuclear ribonucleoprotein A1-like 2 2 2
MIRT698543 TFRC transferrin receptor 2 2
MIRT699982 RREB1 ras responsive element binding protein 1 2 2
MIRT702898 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 2 2
MIRT707383 VCAM1 vascular cell adhesion molecule 1 2 2
MIRT708312 CDH8 cadherin 8 2 2
MIRT708406 GRIN2A glutamate ionotropic receptor NMDA type subunit 2A 2 2
MIRT709299 LDLRAD4 low density lipoprotein receptor class A domain containing 4 2 2
MIRT710326 STK40 serine/threonine kinase 40 2 2
MIRT710729 C19orf68 zinc finger SWIM-type containing 9 2 2
MIRT710970 CMKLR1 chemerin chemokine-like receptor 1 2 2
MIRT711178 EMCN endomucin 2 2
MIRT711590 SETD1A SET domain containing 1A 2 2
MIRT711611 LHX5 LIM homeobox 5 2 2
MIRT711701 GMPR guanosine monophosphate reductase 2 2
MIRT711850 AMOTL2 angiomotin like 2 2 2
MIRT712358 NAT14 N-acetyltransferase 14 (putative) 2 2
MIRT712377 MTPN myotrophin 2 2
MIRT712469 KCNC3 potassium voltage-gated channel subfamily C member 3 2 2
MIRT712839 RHOA ras homolog family member A 2 2
MIRT713592 ANKMY1 ankyrin repeat and MYND domain containing 1 2 2
MIRT713982 ASIC4 acid sensing ion channel subunit family member 4 2 2
MIRT714534 ZBTB39 zinc finger and BTB domain containing 39 2 2
MIRT714570 GALNT10 polypeptide N-acetylgalactosaminyltransferase 10 2 2
MIRT714610 EXO5 exonuclease 5 2 2
MIRT714943 ZNF330 zinc finger protein 330 2 2
MIRT715132 ACADL acyl-CoA dehydrogenase, long chain 2 2
MIRT716018 TMPRSS5 transmembrane protease, serine 5 2 2
MIRT716204 TYW3 tRNA-yW synthesizing protein 3 homolog 2 2
MIRT716674 PPP6R1 protein phosphatase 6 regulatory subunit 1 2 2
MIRT717366 EDN2 endothelin 2 2 2
MIRT718110 CRTC1 CREB regulated transcription coactivator 1 2 2
MIRT718502 GYS1 glycogen synthase 1 2 2
MIRT719146 DPYSL5 dihydropyrimidinase like 5 2 2
MIRT719415 B4GALNT3 beta-1,4-N-acetyl-galactosaminyltransferase 3 2 2
MIRT719986 MAPK1 mitogen-activated protein kinase 1 2 2
MIRT720347 BACE2 beta-site APP-cleaving enzyme 2 2 2
MIRT720452 SLC16A5 solute carrier family 16 member 5 2 2
MIRT720493 TMEM178B transmembrane protein 178B 2 2
MIRT720666 C11orf54 chromosome 11 open reading frame 54 2 2
MIRT721091 CCBE1 collagen and calcium binding EGF domains 1 2 2
MIRT721334 IFNAR2 interferon alpha and beta receptor subunit 2 2 2
MIRT721384 MACC1 MACC1, MET transcriptional regulator 2 2
MIRT721508 CARHSP1 calcium regulated heat stable protein 1 2 2
MIRT721827 POU6F1 POU class 6 homeobox 1 2 2
MIRT722136 TTLL11 tubulin tyrosine ligase like 11 2 2
MIRT723070 GGA1 golgi associated, gamma adaptin ear containing, ARF binding protein 1 2 2
MIRT723115 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT723374 ZNF470 zinc finger protein 470 2 2
MIRT724446 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT724528 ATP2B1 ATPase plasma membrane Ca2+ transporting 1 2 2
MIRT724643 PKDREJ polycystin family receptor for egg jelly 2 2
MIRT724711 CRAMP1L cramped chromatin regulator homolog 1 2 2
MIRT724750 ZNF391 zinc finger protein 391 2 2
MIRT724770 PSG4 pregnancy specific beta-1-glycoprotein 4 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-6769b Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-mir-6769b Docetaxel+Cisplatin+5-Fluorouracil sensitive tissue (hypopharyngeal squamous cell carcinoma)
hsa-miR-6769b-3p Osimertinib 71496458 NSC779217 approved sensitive cell line (PC9)
hsa-miR-6769b-3p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-6769b-3p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)

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